file	marker	process	condition	alignment
Dnmt_TKO_K9me2_merged_dense.bigWig	K9me2	ChromHmm	Dnmt_TKO	uniq
Dnmt_TKO_K9me3_merged_dense_mean.bigWig	K9me3	ChromHmm	Dnmt_TKO	uniq
multi_Dnmt-TKO-H3K9me2_merged.bigWig	K9me2	bedtools	Dnmt_TKO	multi_uniq
multi_Dnmt-TKO-H3K9me3-CHIP_merged_mean.bigWig	K9me3	bedtools	Dnmt_TKO	multi_uniq
multi_Tet-and-Dnmt-KO_H3K9me2_merged.bigWig	K9me2	bedtools	Tet_and_Dnmt_KO	multi_uniq
multi_Tet-and-Dnmt-KO_H3K9me3_merged.bigWig	K9me3	bedtools	Tet_and_Dnmt_KO	multi_uniq
multi_Tet-TKO_H3K9me2_merged.bigWig	K9me2	bedtools	Tet_TKO	multi_uniq
multi_Tet-TKO_H3K9me3_merged.bigWig	K9me3	bedtools	Tet_TKO	multi_uniq
multi_WT_H3K9me2_merged.bigWig	K9me2	bedtools	WT	multi_uniq
multi_WT_H3K9me3_merged.bigWig	K9me3	bedtools	WT	multi_uniq
step3_methylQA_Dnmt-TKO-H3K9me2_merged.bigWig	K9me2	methylQA	Dnmt_TKO	uniq
step3_methylQA_Dnmt-TKO-H3K9me3-CHIP_merged_mean.bigWig	K9me3	methylQA	Dnmt_TKO	uniq
step3_methylQA_Tet-and-Dnmt-KO_H3K9me2_merged.bigWig	K9me2	methylQA	Tet_and_Dnmt_KO	uniq
step3_methylQA_Tet-and-Dnmt-KO_H3K9me3_merged.bigWig	K9me3	methylQA	Tet_and_Dnmt_KO	uniq
step3_methylQA_Tet-TKO_H3K9me2_merged.bigWig	K9me2	methylQA	Tet_TKO	uniq
step3_methylQA_Tet-TKO_H3K9me3_merged.bigWig	K9me3	methylQA	Tet_TKO	uniq
step3_methylQA_WT_H3K9me2_merged.bigWig	K9me2	methylQA	WT	uniq
step3_methylQA_WT_H3K9me3_merged.bigWig	K9me3	methylQA	WT	uniq
step3_methylQA_WT-input_S13_R1_001.fastq.gz.bigWig		methylQA	WT	uniq
Ted_and_Dnmt_KO_K9me3_merged_dense.bigWig	K9me3	ChromHmm	Tet_and_Dnmt_KO	uniq
Ted_TKO_K9me3_merged_dense.bigWig	K9me3	ChromHmm	Tet_TKO	uniq
Tet_and_Dnmt_KO_K9me2_merged_dense.bigWig	K9me2	ChromHmm	Tet_and_Dnmt_KO	uniq
Tet_TKO_K9me2_merged_dense.bigWig	K9me2	ChromHmm	Tet_TKO	uniq
WT_K9me2_merged_dense.bigWig	K9me2	ChromHmm	WT	uniq
WT_K9me3_merged_dense.bigWig	K9me3	ChromHmm	WT	uniq