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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.4.1 (Release date: Sat Aug 21 19:23:23 2021 -0700)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: accurate and versatile sequence motif discovery",
Bioinformatics, Mar. 24, 2021.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.245 C 0.255 G 0.255 T 0.245 

MOTIF 1-GGTTACATAABAAVD STREME-1
letter-probability matrix: alength= 4 w= 15 nsites= 77 E= 1.8e-001
 0.204670 0.000833 0.544522 0.249975
 0.046105 0.091442 0.771043 0.091409
 0.000801 0.023486 0.000833 0.974880
 0.000801 0.000833 0.000833 0.997533
 0.929576 0.000833 0.046138 0.023453
 0.023453 0.703087 0.000833 0.272627
 0.771011 0.114094 0.114094 0.000801
 0.046105 0.023486 0.000833 0.929576
 0.974880 0.000833 0.023486 0.000801
 0.974880 0.000833 0.000833 0.023453
 0.068757 0.385920 0.227355 0.317967
 0.521837 0.114094 0.204703 0.159366
 0.431228 0.204703 0.182051 0.182018
 0.295279 0.272660 0.363304 0.068757
 0.250011 0.159399 0.227355 0.363236

MOTIF 2-TTCCAAG STREME-2
letter-probability matrix: alength= 4 w= 7 nsites= 115 E= 3.8e-001
 0.016397 0.087129 0.000694 0.895779
 0.028286 0.019187 0.122454 0.830073
 0.038112 0.873372 0.087849 0.000667
 0.022833 0.878489 0.019585 0.079094
 0.783335 0.000694 0.199125 0.016846
 0.790746 0.095936 0.000694 0.112624
 0.081430 0.033126 0.798941 0.086503

MOTIF 3-CTTTGCT STREME-3
letter-probability matrix: alength= 4 w= 7 nsites= 123 E= 1.2e+000
 0.034723 0.840301 0.032973 0.092004
 0.025552 0.019990 0.158198 0.796261
 0.176272 0.000908 0.000908 0.821912
 0.000872 0.000908 0.326327 0.671893
 0.012233 0.065867 0.921029 0.000872
 0.000872 0.939644 0.058611 0.000872
 0.075263 0.079571 0.000908 0.844258

MOTIF 4-AAAGGGAAC STREME-4
letter-probability matrix: alength= 4 w= 9 nsites= 55 E= 3.3e+000
 0.922256 0.050934 0.025927 0.000884
 0.847196 0.050973 0.075940 0.025891
 0.797182 0.075940 0.025927 0.100951
 0.011249 0.025927 0.886919 0.075904
 0.036256 0.025927 0.836866 0.100951
 0.100990 0.125994 0.711753 0.061263
 0.897130 0.076059 0.025927 0.000884
 0.897249 0.025927 0.000920 0.075904
 0.100951 0.822186 0.025927 0.050937

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Stopped because 3 consecutive motifs exceeded the p-value threshold (0.05).
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COMMAND:	streme --verbosity 1 --oc out_meme/streme_out -dna --p out_meme/seqs-centered --minw 6 --maxw 15 --order 2
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CPU:		regmedhpc1
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FINALTIME:	6.05 seconds
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