Information for 13-AMCYTTAACC (Motif 12)

C T G A G T A C A G T C G A T C G A C T G C A T C T G A T G C A G T A C G T A C
Reverse Opposite:
C A T G C A T G A C G T G A C T C G T A C T G A C T A G T C A G C A T G G A C T
p-value:1e-157
log p-value:-3.620e+02
Information Content per bp:1.531
Number of Target Sequences with motif1463.0
Percentage of Target Sequences with motif4.79%
Number of Background Sequences with motif670.0
Percentage of Background Sequences with motif2.20%
Average Position of motif in Targets101.5 +/- 51.9bp
Average Position of motif in Background100.6 +/- 60.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.77
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRB/MA1574.1/Jaspar

Match Rank:1
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---AMCYTTAACC--
NTGACCTTTGACCCC
 A C G T A C G T A C G T C T G A G T A C A G T C G A T C G A C T G C A T C T G A T G C A G T A C G T A C A C G T A C G T
T C G A G A C T T C A G T G C A G T A C G T A C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C

PPARA::RXRA/MA1148.1/Jaspar

Match Rank:2
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---AMCYTTAACC-----
NTGACCTTTGACCTANAT
 A C G T A C G T A C G T C T G A G T A C A G T C G A T C G A C T G C A T C T G A T G C A G T A C G T A C A C G T A C G T A C G T A C G T A C G T
T G C A G A C T T C A G T G C A G T A C A G T C A G C T G A C T G A C T T C A G T G C A G A T C G T A C A G C T T G C A A G T C C G T A C G A T

NR2C2/MA0504.1/Jaspar

Match Rank:3
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--AMCYTTAACC---
TGACCTCTGACCCCN
 A C G T A C G T C T G A G T A C A G T C G A T C G A C T G C A T C T G A T G C A G T A C G T A C A C G T A C G T A C G T
G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T

PPARD/MA1550.1/Jaspar

Match Rank:4
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---AMCYTTAACC---
NTGACCTTTGACCCCN
 A C G T A C G T A C G T C T G A G T A C A G T C G A T C G A C T G C A T C T G A T G C A G T A C G T A C A C G T A C G T A C G T
C A G T G A C T T C A G T G C A G T A C G T A C A G C T G A C T A G C T T C A G T G C A G T A C G A T C A G T C A G T C C G A T

PPARa(NR),DR1/Liver-Ppara-ChIP-Seq(GSE47954)/Homer

Match Rank:5
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--AMCYTTAACC---
TGACCTTTGMCCTNB
 A C G T A C G T C T G A G T A C A G T C G A T C G A C T G C A T C T G A T G C A G T A C G T A C A C G T A C G T A C G T
G C A T T C A G T G C A G T A C G A T C A G C T A G C T A C G T T A C G T G C A G A T C G A T C G A C T G C T A A C T G

NR2F1(var.2)/MA1537.1/Jaspar

Match Rank:6
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---AMCYTTAACC--
NTGACCTTTGACCTN
 A C G T A C G T A C G T C T G A G T A C A G T C G A T C G A C T G C A T C T G A T G C A G T A C G T A C A C G T A C G T
C A T G G A C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C

RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:7
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-AMCYTTAACC-
TGACCTTGACCT
 A C G T C T G A G T A C A G T C G A T C G A C T G C A T C T G A T G C A G T A C G T A C A C G T
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:8
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--AMCYTTAACC--
TGACCTTTGACCTC
 A C G T A C G T C T G A G T A C A G T C G A T C G A C T G C A T C T G A T G C A G T A C G T A C A C G T A C G T
G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C

Nr2f6/MA0677.1/Jaspar

Match Rank:9
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--AMCYTTAACC--
TGACCTTTGACCTN
 A C G T A C G T C T G A G T A C A G T C G A T C G A C T G C A T C T G A T G C A G T A C G T A C A C G T A C G T
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C

RXRG/MA0856.1/Jaspar

Match Rank:10
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--AMCYTTAACC--
TGACCTTTGACCCC
 A C G T A C G T C T G A G T A C A G T C G A T C G A C T G C A T C T G A T G C A G T A C G T A C A C G T A C G T
A G C T T C A G T G C A G T A C G T A C G A C T G A C T G A C T T C A G T G C A G T A C G T A C A G T C A G T C