Information for 1-ANAGGTYANN (Motif 2)

C G T A C T A G C T G A C T A G C T A G G A C T A G T C C T G A C A G T G T C A
Reverse Opposite:
C A G T G T C A G A C T T C A G C T G A G A T C G A T C G A C T G A T C G C A T
p-value:1e-805
log p-value:-1.854e+03
Information Content per bp:1.454
Number of Target Sequences with motif5409.0
Percentage of Target Sequences with motif17.70%
Number of Background Sequences with motif2192.6
Percentage of Background Sequences with motif7.19%
Average Position of motif in Targets99.8 +/- 51.8bp
Average Position of motif in Background99.0 +/- 60.7bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

COUP-TFII(NR)/K562-NR2F1-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.87
Offset:-4
Orientation:forward strand
Alignment:----ANAGGTYANN
GKBCARAGGTCA--
 A C G T A C G T A C G T A C G T C G T A C T A G C T G A C T A G C T A G G A C T A G T C C T G A C A G T G T C A
T A C G A C T G A G C T G T A C C G T A T C G A C T G A A C T G C A T G A C G T A G T C C G T A A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:2
Score:0.87
Offset:0
Orientation:forward strand
Alignment:ANAGGTYANN
AGRGGTCA--
 C G T A C T A G C T G A C T A G C T A G G A C T A G T C C T G A C A G T G T C A
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T

EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.87
Offset:-4
Orientation:forward strand
Alignment:----ANAGGTYANN
NRBCARRGGTCA--
 A C G T A C G T A C G T A C G T C G T A C T A G C T G A C T A G C T A G G A C T A G T C C T G A C A G T G T C A
T C A G T C A G A C G T G T A C G C T A T C A G C T G A A C T G A C T G A G C T A G T C C G T A A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.86
Offset:0
Orientation:forward strand
Alignment:ANAGGTYANN
TRAGGTCA--
 C G T A C T A G C T G A C T A G C T A G G A C T A G T C C T G A C A G T G T C A
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T

NR2C2(var.2)/MA1536.1/Jaspar

Match Rank:5
Score:0.86
Offset:1
Orientation:forward strand
Alignment:ANAGGTYANN
-GAGGTCAT-
 C G T A C T A G C T G A C T A G C T A G G A C T A G T C C T G A C A G T G T C A
A C G T T C A G T C G A A C T G A C T G A C G T A G T C C T G A G C A T A C G T

NR2F2/MA1111.1/Jaspar

Match Rank:6
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-ANAGGTYANN
CAAAGGTCAAA
 A C G T C G T A C T A G C T G A C T A G C T A G G A C T A G T C C T G A C A G T G T C A
G A T C G T C A C G T A C T G A C A T G C T A G A C G T G A T C C T G A C T G A C T G A

NR2C1/MA1535.1/Jaspar

Match Rank:7
Score:0.84
Offset:0
Orientation:forward strand
Alignment:ANAGGTYANN
CGAGGTCAC-
 C G T A C T A G C T G A C T A G C T A G G A C T A G T C C T G A C A G T G T C A
G T A C C T A G T C G A A C T G A C T G A C G T A T G C C T G A G A T C A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:8
Score:0.84
Offset:2
Orientation:forward strand
Alignment:ANAGGTYANN
--AGGTCA--
 C G T A C T A G C T G A C T A G C T A G G A C T A G T C C T G A C A G T G T C A
A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:9
Score:0.84
Offset:1
Orientation:forward strand
Alignment:ANAGGTYANN
-AAGGTCAC-
 C G T A C T A G C T G A C T A G C T A G G A C T A G T C C T G A C A G T G T C A
A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:10
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-ANAGGTYANN--
CAAAGGTCAAGGG
 A C G T C G T A C T A G C T G A C T A G C T A G G A C T A G T C C T G A C A G T G T C A A C G T A C G T
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G