Information for 11-RGCCCCGCCC (Motif 11)


Reverse Opposite:

p-value:1e-63
log p-value:-1.457e+02
Information Content per bp:1.593
Number of Target Sequences with motif527.0
Percentage of Target Sequences with motif5.70%
Number of Background Sequences with motif832.6
Percentage of Background Sequences with motif2.51%
Average Position of motif in Targets102.2 +/- 54.0bp
Average Position of motif in Background93.9 +/- 55.9bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.70
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.92
Offset:0
Orientation:forward strand
Alignment:RGCCCCGCCC--
GGCCCCGCCCCC

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-RGCCCCGCCC---
NAGCCCCGCCCCCN

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:3
Score:0.86
Offset:1
Orientation:reverse strand
Alignment:RGCCCCGCCC-
-GCCMCRCCCH

MA0599.1_KLF5/Jaspar

Match Rank:4
Score:0.86
Offset:1
Orientation:forward strand
Alignment:RGCCCCGCCC-
-GCCCCGCCCC

MA0516.1_SP2/Jaspar

Match Rank:5
Score:0.86
Offset:1
Orientation:forward strand
Alignment:RGCCCCGCCC------
-GCCCCGCCCCCTCCC

MA0039.2_Klf4/Jaspar

Match Rank:6
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:RGCCCCGCCC-
-GCCCCACCCA

PB0039.1_Klf7_1/Jaspar

Match Rank:7
Score:0.85
Offset:-2
Orientation:forward strand
Alignment:--RGCCCCGCCC----
TCGACCCCGCCCCTAT

MA0079.3_SP1/Jaspar

Match Rank:8
Score:0.84
Offset:1
Orientation:forward strand
Alignment:RGCCCCGCCC--
-GCCCCGCCCCC

POL011.1_XCPE1/Jaspar

Match Rank:9
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:RGCCCCGCCC
GGTCCCGCCC

PB0180.1_Sp4_2/Jaspar

Match Rank:10
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--RGCCCCGCCC---
NNGGCCACGCCTTTN