Information for 17-NNTGTAGGGTNN (Motif 12)


Reverse Opposite:

p-value:1e-51
log p-value:-1.180e+02
Information Content per bp:1.411
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif0.34%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets118.2 +/- 54.4bp
Average Position of motif in Background152.1 +/- 19.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.42
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0032.1_FOXC1/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--NNTGTAGGGTNN
GGTAAGTA------

PB0157.1_Rara_2/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:NNTGTAGGGTNN----
AGAGCGGGGTCAAGTA

MA0057.1_MZF1_5-13/Jaspar

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:NNTGTAGGGTNN-
---GGAGGGGGAA

PB0154.1_Osr1_2/Jaspar

Match Rank:4
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----NNTGTAGGGTNN
NNNTTAGGTAGCNTNT

MA0595.1_SREBF1/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:NNTGTAGGGTNN-
---GTGGGGTGAT

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---NNTGTAGGGTNN--
NNTNNTGTCTGGNNTNG

PB0025.1_Glis2_1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-NNTGTAGGGTNN---
NTNTGGGGGGTCNNNA

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:NNTGTAGGGTNN---
---GTGGCGTGACNG

POL007.1_BREd/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:NNTGTAGGGTNN
---GTTTGTT--

MA0111.1_Spz1/Jaspar

Match Rank:10
Score:0.55
Offset:5
Orientation:forward strand
Alignment:NNTGTAGGGTNN----
-----AGGGTAACAGC