Information for 11-CTRCVCTR (Motif 13)


Reverse Opposite:

p-value:1e-43
log p-value:-1.010e+02
Information Content per bp:1.565
Number of Target Sequences with motif3051.0
Percentage of Target Sequences with motif33.02%
Number of Background Sequences with motif8766.3
Percentage of Background Sequences with motif26.45%
Average Position of motif in Targets100.3 +/- 55.0bp
Average Position of motif in Background99.3 +/- 69.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.55
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTRCVCTR
GCTGTG---

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.54
Offset:-7
Orientation:forward strand
Alignment:-------CTRCVCTR--
AATCGCACTGCATTCCG

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CTRCVCTR--
CTGACCTTTG

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CTRCVCTR
NNACTTGCCTT

MA0512.1_Rxra/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CTRCVCTR--
NCTGACCTTTG

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CTRCVCTR
TWGTCTGV----

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CTRCVCTR
NGCTN-----

PB0199.1_Zfp161_2/Jaspar

Match Rank:8
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----CTRCVCTR-
NNGCNCTGCGCGGC

PB0051.1_Osr2_1/Jaspar

Match Rank:9
Score:0.50
Offset:-5
Orientation:reverse strand
Alignment:-----CTRCVCTR---
CNNNGCTACTGTANNN

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.49
Offset:-6
Orientation:forward strand
Alignment:------CTRCVCTR
VBSYGTCTGG----