Information for 20-CACACMCCCMCA (Motif 15)


Reverse Opposite:

p-value:1e-42
log p-value:-9.749e+01
Information Content per bp:1.681
Number of Target Sequences with motif111.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif76.2
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets97.5 +/- 56.5bp
Average Position of motif in Background98.6 +/- 91.7bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.37
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----CACACMCCCMCA
AGCGGCACACACGCAA-

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CACACMCCCMCA
GGCCACACCCAN---

MA0493.1_Klf1/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CACACMCCCMCA
GGCCACACCCA----

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CACACMCCCMCA
--CRCCCACGCA

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CACACMCCCMCA
GCCACACCCA----

MA0472.1_EGR2/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CACACMCCCMCA-
CCCCCGCCCACGCAC

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CACACMCCCMCA
GCCMCRCCCH----

PB0013.1_Eomes_1/Jaspar

Match Rank:8
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------CACACMCCCMCA
NNTTTTCACACCTTNNN-

PB0208.1_Zscan4_2/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CACACMCCCMCA
CGAAGCACACAAAATA-

MA0039.2_Klf4/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CACACMCCCMCA
GCCCCACCCA----