Information for 21-ATTCTCAGAA (Motif 19)


Reverse Opposite:

p-value:1e-29
log p-value:-6.824e+01
Information Content per bp:1.934
Number of Target Sequences with motif48.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif18.8
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets115.1 +/- 53.6bp
Average Position of motif in Background97.6 +/- 44.8bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:1
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:ATTCTCAGAA--
TTTCTNAGAAAN

MA0519.1_Stat5a::Stat5b/Jaspar

Match Rank:2
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-ATTCTCAGAA
ATTTCCAAGAA

MA0144.2_STAT3/Jaspar

Match Rank:3
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:ATTCTCAGAA-
TTTCCCAGAAN

MA0137.3_STAT1/Jaspar

Match Rank:4
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:ATTCTCAGAA-
TTTCCTGGAAA

MA0518.1_Stat4/Jaspar

Match Rank:5
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---ATTCTCAGAA-
NNNTTTCCTGGAAA

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:6
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-ATTCTCAGAA---
ATTTCCNGGAAATN

PB0006.1_Bcl6b_1/Jaspar

Match Rank:7
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---ATTCTCAGAA---
NNNATTCCTCGAAAGN

PB0138.1_Irf4_2/Jaspar

Match Rank:8
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---ATTCTCAGAA--
AGTATTCTCGGTTGC

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:ATTCTCAGAA-
-TTCCNGGAAG

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ATTCTCAGAA-
NTTTCCNGGAAA