Information for 2-TCSAWTCSAWTC (Motif 2)


Reverse Opposite:

p-value:1e-636
log p-value:-1.466e+03
Information Content per bp:1.766
Number of Target Sequences with motif365.0
Percentage of Target Sequences with motif3.95%
Number of Background Sequences with motif9.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets101.2 +/- 50.8bp
Average Position of motif in Background89.8 +/- 74.4bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)3.65
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TCSAWTCSAWTC--
AATCGCACTGCATTCCG

PB0005.1_Bbx_1/Jaspar

Match Rank:2
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TCSAWTCSAWTC
NANTTCATTGAATTA

PB0068.1_Sox1_1/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TCSAWTCSAWTC---
AATCAATTCAATAATT

MA0479.1_FOXH1/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TCSAWTCSAWTC
TGTGGATTNNN---

MA0468.1_DUX4/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TCSAWTCSAWTC-
--TAATTTAATCA

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----TCSAWTCSAWTC
NNTGTGGATTSS----

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TCSAWTCSAWTC--
--AGATGCAATCCC

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TCSAWTCSAWTC
-GCATTCCAGN-

PB0028.1_Hbp1_1/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TCSAWTCSAWTC-----
-NNCATTCATTCATNNN

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:10
Score:0.51
Offset:2
Orientation:forward strand
Alignment:TCSAWTCSAWTC
--TAATCAATTA