Information for 7-ACACACCACACA (Motif 3)


Reverse Opposite:

p-value:1e-134
log p-value:-3.087e+02
Information Content per bp:1.739
Number of Target Sequences with motif258.0
Percentage of Target Sequences with motif2.79%
Number of Background Sequences with motif120.6
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets100.3 +/- 53.5bp
Average Position of motif in Background93.3 +/- 134.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)2.95
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0511.1_RUNX2/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ACACACCACACA----
-CAAACCACAAACCCC

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ACACACCACACA-
-NWAACCACADNN

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ACACACCACACA-----
-AGCGGCACACACGCAA

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ACACACCACACA
CNGTCACGCCAC---

PB0208.1_Zscan4_2/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:ACACACCACACA-----
-CGAAGCACACAAAATA

MA0002.2_RUNX1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:ACACACCACACA-
--AAACCACAGAN

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-ACACACCACACA
ATCACCCCAT---

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:ACACACCACACA
-NAAACCACAG-

MA0479.1_FOXH1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:ACACACCACACA
-TCCAATCCACA

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:ACACACCACACA
--AAACCACAGC