Information for 8-RSCCTTAGGC (Motif 4)


Reverse Opposite:

p-value:1e-107
log p-value:-2.481e+02
Information Content per bp:1.584
Number of Target Sequences with motif794.0
Percentage of Target Sequences with motif8.59%
Number of Background Sequences with motif1186.5
Percentage of Background Sequences with motif3.58%
Average Position of motif in Targets101.8 +/- 54.4bp
Average Position of motif in Background100.2 +/- 64.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:1
Score:0.94
Offset:-2
Orientation:reverse strand
Alignment:--RSCCTTAGGC
WTGSCCTSAGGS

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.91
Offset:-2
Orientation:forward strand
Alignment:--RSCCTTAGGC
ATGCCCTGAGGC

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:3
Score:0.88
Offset:-2
Orientation:forward strand
Alignment:--RSCCTTAGGC---
ATTGCCTGAGGCAAT

MA0524.1_TFAP2C/Jaspar

Match Rank:4
Score:0.87
Offset:-3
Orientation:forward strand
Alignment:---RSCCTTAGGC--
CATGGCCCCAGGGCA

MA0003.2_TFAP2A/Jaspar

Match Rank:5
Score:0.87
Offset:-1
Orientation:reverse strand
Alignment:-RSCCTTAGGC----
TGCCCTGAGGCANTN

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:6
Score:0.87
Offset:-2
Orientation:forward strand
Alignment:--RSCCTTAGGC---
ATTGCCTGAGGCGAA

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:7
Score:0.85
Offset:-2
Orientation:forward strand
Alignment:--RSCCTTAGGC---
ATTCCCTGAGGGGAA

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:8
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--RSCCTTAGGC--
NTGCCCTAGGGCAA

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:9
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--RSCCTTAGGC---
ATTGCCTCAGGCAAT

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:10
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--RSCCTTAGGC--
NTGCCCANNGGTNA