Information for 14-CTAACCCTAACC (Motif 8)


Reverse Opposite:

p-value:1e-70
log p-value:-1.618e+02
Information Content per bp:1.969
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets101.7 +/- 51.8bp
Average Position of motif in Background175.5 +/- 11.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)11.60
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTAACCCTAACC
GCTAATCC-----

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTAACCCTAACC-
-TGACCTTGACCT

PH0025.1_Dmbx1/Jaspar

Match Rank:3
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CTAACCCTAACC-
NNNATTAATCCGNTTNA

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTAACCCTAACC
YTAATCCY----

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTAACCCTAACC
NYTAATCCYB---

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CTAACCCTAACC
-TAATCCCN---

MA0057.1_MZF1_5-13/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CTAACCCTAACC
TTCCCCCTAC--

MA0467.1_Crx/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CTAACCCTAACC
CTAATCCTCTT-

PB0107.1_Ascl2_2/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CTAACCCTAACC----
CTATCCCCGCCCTATT

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CTAACCCTAACC--
---NNACTTACCTN