Information for 15-TAARRGCTTTGC (Motif 9)


Reverse Opposite:

p-value:1e-69
log p-value:-1.605e+02
Information Content per bp:1.551
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets102.0 +/- 52.9bp
Average Position of motif in Background105.8 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.35
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0101.1_REL/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TAARRGCTTTGC
--GGGGATTTCC

MA0105.3_NFKB1/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TAARRGCTTTGC-
--GGGAATTTCCC

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:TAARRGCTTTGC----
------ATTTGCATAT

MA0107.1_RELA/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TAARRGCTTTGC
--GGGAATTTCC

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TAARRGCTTTGC-
-NGGGGATTTCCC

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.58
Offset:6
Orientation:forward strand
Alignment:TAARRGCTTTGC----
------ATTTGCATAA

MA0156.1_FEV/Jaspar

Match Rank:7
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:TAARRGCTTTGC--
------ATTTCCTG

PB0115.1_Ehf_2/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TAARRGCTTTGC------
--TAGTATTTCCGATCTT

MA0152.1_NFATC2/Jaspar

Match Rank:9
Score:0.57
Offset:6
Orientation:forward strand
Alignment:TAARRGCTTTGC-
------TTTTCCA

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.57
Offset:6
Orientation:forward strand
Alignment:TAARRGCTTTGC----
------ATTTCCTGTN