| Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
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| 1 |  | TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-538 | -1.240e+03 | 0.0000 | 2289.0 | 24.77% | 2578.9 | 7.78% | motif file (matrix) |
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| 2 |  | TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-502 | -1.157e+03 | 0.0000 | 1915.0 | 20.72% | 1953.0 | 5.89% | motif file (matrix) |
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| 3 |  | TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-343 | -7.906e+02 | 0.0000 | 1489.0 | 16.11% | 1644.4 | 4.96% | motif file (matrix) |
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| 4 |  | AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer | 1e-105 | -2.423e+02 | 0.0000 | 1378.0 | 14.91% | 2672.0 | 8.06% | motif file (matrix) |
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| 5 |  | AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer | 1e-91 | -2.117e+02 | 0.0000 | 1607.0 | 17.39% | 3437.2 | 10.37% | motif file (matrix) |
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| 6 |  | Sp1(Zf)/Promoter/Homer | 1e-48 | -1.124e+02 | 0.0000 | 461.0 | 4.99% | 771.3 | 2.33% | motif file (matrix) |
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| 7 |  | Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-48 | -1.110e+02 | 0.0000 | 456.0 | 4.93% | 763.2 | 2.30% | motif file (matrix) |
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| 8 |  | Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-43 | -1.012e+02 | 0.0000 | 353.0 | 3.82% | 547.4 | 1.65% | motif file (matrix) |
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| 9 |  | Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-31 | -7.207e+01 | 0.0000 | 628.0 | 6.80% | 1374.2 | 4.15% | motif file (matrix) |
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| 10 |  | Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-30 | -6.983e+01 | 0.0000 | 623.0 | 6.74% | 1372.8 | 4.14% | motif file (matrix) |
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| 11 |  | Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-29 | -6.685e+01 | 0.0000 | 259.0 | 2.80% | 423.4 | 1.28% | motif file (matrix) |
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| 12 |  | Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-28 | -6.593e+01 | 0.0000 | 982.0 | 10.63% | 2450.9 | 7.40% | motif file (matrix) |
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| 13 |  | BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-27 | -6.247e+01 | 0.0000 | 699.0 | 7.56% | 1633.3 | 4.93% | motif file (matrix) |
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| 14 |  | Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-26 | -6.098e+01 | 0.0000 | 671.0 | 7.26% | 1561.1 | 4.71% | motif file (matrix) |
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| 15 |  | GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer | 1e-25 | -5.775e+01 | 0.0000 | 406.0 | 4.39% | 833.2 | 2.51% | motif file (matrix) |
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| 16 |  | Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-22 | -5.135e+01 | 0.0000 | 700.0 | 7.57% | 1711.5 | 5.16% | motif file (matrix) |
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| 17 |  | AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-19 | -4.460e+01 | 0.0000 | 774.0 | 8.38% | 1987.9 | 6.00% | motif file (matrix) |
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| 18 |  | GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-16 | -3.746e+01 | 0.0000 | 1422.0 | 15.39% | 4124.6 | 12.45% | motif file (matrix) |
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| 19 |  | Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer | 1e-15 | -3.660e+01 | 0.0000 | 681.0 | 7.37% | 1771.5 | 5.35% | motif file (matrix) |
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| 20 |  | NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-14 | -3.446e+01 | 0.0000 | 77.0 | 0.83% | 95.2 | 0.29% | motif file (matrix) |
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| 21 |  | STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer | 1e-14 | -3.413e+01 | 0.0000 | 318.0 | 3.44% | 711.6 | 2.15% | motif file (matrix) |
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| 22 |  | Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer | 1e-14 | -3.226e+01 | 0.0000 | 69.0 | 0.75% | 83.2 | 0.25% | motif file (matrix) |
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| 23 |  | KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer | 1e-13 | -3.223e+01 | 0.0000 | 1809.0 | 19.58% | 5483.8 | 16.55% | motif file (matrix) |
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| 24 |  | Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer | 1e-13 | -3.168e+01 | 0.0000 | 290.0 | 3.14% | 646.5 | 1.95% | motif file (matrix) |
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| 25 |  | Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer | 1e-12 | -2.800e+01 | 0.0000 | 67.0 | 0.73% | 87.4 | 0.26% | motif file (matrix) |
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| 26 |  | HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer | 1e-9 | -2.247e+01 | 0.0000 | 425.0 | 4.60% | 1112.5 | 3.36% | motif file (matrix) |
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| 27 |  | MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer | 1e-9 | -2.184e+01 | 0.0000 | 204.0 | 2.21% | 460.1 | 1.39% | motif file (matrix) |
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| 28 |  | p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer | 1e-9 | -2.140e+01 | 0.0000 | 159.0 | 1.72% | 337.3 | 1.02% | motif file (matrix) |
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| 29 |  | p53(p53)/Saos-p53-ChIP-Seq/Homer | 1e-9 | -2.140e+01 | 0.0000 | 159.0 | 1.72% | 337.3 | 1.02% | motif file (matrix) |
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| 30 |  | Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer | 1e-8 | -1.972e+01 | 0.0000 | 449.0 | 4.86% | 1213.6 | 3.66% | motif file (matrix) |
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| 31 |  | EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer | 1e-7 | -1.829e+01 | 0.0000 | 360.0 | 3.90% | 951.2 | 2.87% | motif file (matrix) |
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| 32 |  | Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer | 1e-7 | -1.789e+01 | 0.0000 | 135.0 | 1.46% | 289.7 | 0.87% | motif file (matrix) |
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| 33 |  | STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer | 1e-7 | -1.782e+01 | 0.0000 | 251.0 | 2.72% | 624.4 | 1.88% | motif file (matrix) |
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| 34 |  | TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer | 1e-7 | -1.758e+01 | 0.0000 | 122.0 | 1.32% | 255.6 | 0.77% | motif file (matrix) |
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| 35 |  | CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer | 1e-7 | -1.636e+01 | 0.0000 | 174.0 | 1.88% | 409.0 | 1.23% | motif file (matrix) |
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| 36 |  | Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer | 1e-7 | -1.620e+01 | 0.0000 | 762.0 | 8.25% | 2264.5 | 6.83% | motif file (matrix) |
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| 37 |  | E-box(bHLH)/Promoter/Homer | 1e-6 | -1.606e+01 | 0.0000 | 91.0 | 0.98% | 179.5 | 0.54% | motif file (matrix) |
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| 38 |  | EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer | 1e-6 | -1.592e+01 | 0.0000 | 1116.0 | 12.08% | 3445.1 | 10.40% | motif file (matrix) |
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| 39 |  | ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer | 1e-6 | -1.475e+01 | 0.0000 | 1417.0 | 15.33% | 4487.8 | 13.54% | motif file (matrix) |
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| 40 |  | NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer | 1e-6 | -1.393e+01 | 0.0000 | 113.0 | 1.22% | 249.5 | 0.75% | motif file (matrix) |
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| 41 |  | RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer | 1e-5 | -1.366e+01 | 0.0000 | 1088.0 | 11.77% | 3396.9 | 10.25% | motif file (matrix) |
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| 42 |  | TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer | 1e-5 | -1.328e+01 | 0.0000 | 69.0 | 0.75% | 133.5 | 0.40% | motif file (matrix) |
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| 43 |  | p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer | 1e-5 | -1.237e+01 | 0.0000 | 403.0 | 4.36% | 1152.9 | 3.48% | motif file (matrix) |
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| 44 |  | MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer | 1e-5 | -1.163e+01 | 0.0001 | 620.0 | 6.71% | 1871.7 | 5.65% | motif file (matrix) |
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| 45 |  | GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-5 | -1.159e+01 | 0.0001 | 88.0 | 0.95% | 192.8 | 0.58% | motif file (matrix) |
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| 46 |  | RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer | 1e-4 | -1.082e+01 | 0.0001 | 1034.0 | 11.19% | 3276.2 | 9.89% | motif file (matrix) |
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| 47 |  | Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer | 1e-4 | -1.038e+01 | 0.0002 | 184.0 | 1.99% | 484.7 | 1.46% | motif file (matrix) |
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| 48 |  | Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-3 | -8.734e+00 | 0.0009 | 312.0 | 3.38% | 908.5 | 2.74% | motif file (matrix) |
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| 49 |  | GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-3 | -7.727e+00 | 0.0024 | 170.0 | 1.84% | 467.5 | 1.41% | motif file (matrix) |
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| 50 |  | NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer | 1e-3 | -7.714e+00 | 0.0024 | 59.0 | 0.64% | 132.9 | 0.40% | motif file (matrix) |
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| 51 |  | PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer | 1e-3 | -7.572e+00 | 0.0027 | 924.0 | 10.00% | 2983.5 | 9.00% | motif file (matrix) |
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| 52 |  | CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-3 | -7.523e+00 | 0.0027 | 662.0 | 7.16% | 2093.3 | 6.32% | motif file (matrix) |
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| 53 |  | Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer | 1e-3 | -7.511e+00 | 0.0027 | 1083.0 | 11.72% | 3530.1 | 10.65% | motif file (matrix) |
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| 54 |  | GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-3 | -6.912e+00 | 0.0049 | 85.0 | 0.92% | 213.6 | 0.64% | motif file (matrix) |
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| 55 |  | NFY(CCAAT)/Promoter/Homer | 1e-2 | -6.865e+00 | 0.0050 | 655.0 | 7.09% | 2085.7 | 6.29% | motif file (matrix) |
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| 56 |  | STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer | 1e-2 | -6.755e+00 | 0.0055 | 407.0 | 4.40% | 1253.9 | 3.78% | motif file (matrix) |
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| 57 |  | ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer | 1e-2 | -6.484e+00 | 0.0071 | 1943.0 | 21.03% | 6556.4 | 19.79% | motif file (matrix) |
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| 58 |  | p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer | 1e-2 | -6.303e+00 | 0.0083 | 34.0 | 0.37% | 70.8 | 0.21% | motif file (matrix) |
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| 59 |  | E2F(E2F)/Hela-CellCycle-Expression/Homer | 1e-2 | -6.139e+00 | 0.0097 | 30.0 | 0.32% | 60.5 | 0.18% | motif file (matrix) |
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| 60 |  | bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.037e+00 | 0.0105 | 344.0 | 3.72% | 1057.1 | 3.19% | motif file (matrix) |
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| 61 |  | GFY(?)/Promoter/Homer | 1e-2 | -5.884e+00 | 0.0120 | 68.0 | 0.74% | 170.4 | 0.51% | motif file (matrix) |
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| 62 |  | Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer | 1e-2 | -5.876e+00 | 0.0120 | 847.0 | 9.17% | 2768.2 | 8.35% | motif file (matrix) |
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| 63 |  | NRF(NRF)/Promoter/Homer | 1e-2 | -5.277e+00 | 0.0214 | 174.0 | 1.88% | 510.4 | 1.54% | motif file (matrix) |
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| 64 |  | Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer | 1e-2 | -5.184e+00 | 0.0231 | 122.0 | 1.32% | 344.6 | 1.04% | motif file (matrix) |
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