Information for 12-TMKATTCG (Motif 12)


Reverse Opposite:

p-value:1e-49
log p-value:-1.129e+02
Information Content per bp:1.775
Number of Target Sequences with motif396.0
Percentage of Target Sequences with motif3.05%
Number of Background Sequences with motif412.0
Percentage of Background Sequences with motif1.32%
Average Position of motif in Targets98.8 +/- 56.8bp
Average Position of motif in Background100.5 +/- 62.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0036.1_Irf6_1/Jaspar

Match Rank:1
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TMKATTCG-----
NNNTTGGTTTCGNTNNN

PH0044.1_Homez/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TMKATTCG--------
AAAACATCGTTTTTAAG

PB0035.1_Irf5_1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TMKATTCG------
NTGGTTTCGGTTNNN

PB0034.1_Irf4_1/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TMKATTCG-----
TNTGGTTTCGATACN

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----TMKATTCG
NNTGTGGATTSS

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TMKATTCG
--GCTTCC

PB0125.1_Gata3_2/Jaspar

Match Rank:7
Score:0.54
Offset:-9
Orientation:forward strand
Alignment:---------TMKATTCG-----
TTTTGTAGATTTTATCGACTTA

MA0479.1_FOXH1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TMKATTCG-
TGTGGATTNNN

PB0185.1_Tcf1_2/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TMKATTCG------
NNTAATCCNGNCNN

PH0057.1_Hoxb13/Jaspar

Match Rank:10
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----TMKATTCG---
NNAATTTTATTGGNTN