Information for 19-CTCMACCC (Motif 13)


Reverse Opposite:

p-value:1e-27
log p-value:-6.316e+01
Information Content per bp:1.716
Number of Target Sequences with motif2213.0
Percentage of Target Sequences with motif17.07%
Number of Background Sequences with motif4257.7
Percentage of Background Sequences with motif13.66%
Average Position of motif in Targets100.3 +/- 55.5bp
Average Position of motif in Background99.4 +/- 66.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.28
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0599.1_KLF5/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CTCMACCC-
GCCCCGCCCC

MA0130.1_ZNF354C/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CTCMACCC
ATCCAC--

MA0039.2_Klf4/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CTCMACCC-
GCCCCACCCA

POL003.1_GC-box/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CTCMACCC---
NAGCCCCGCCCCCN

MA0493.1_Klf1/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CTCMACCC-
GGCCACACCCA

MA0079.3_SP1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CTCMACCC--
GCCCCGCCCCC

MA0133.1_BRCA1/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CTCMACCC
-ACAACAC

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTCMACCC-
GCCMCRCCCH

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CTCMACCC--
GGCCACACCCAN

PB0107.1_Ascl2_2/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CTCMACCC----
CTATCCCCGCCCTATT