Information for 25-TCTCTCTC (Motif 17)


Reverse Opposite:

p-value:1e-4
log p-value:-9.270e+00
Information Content per bp:1.958
Number of Target Sequences with motif439.0
Percentage of Target Sequences with motif3.39%
Number of Background Sequences with motif880.9
Percentage of Background Sequences with motif2.83%
Average Position of motif in Targets97.1 +/- 53.6bp
Average Position of motif in Background93.6 +/- 65.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0140.1_Irf6_2/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TCTCTCTC------
ACCACTCTCGGTCAC

PB0139.1_Irf5_2/Jaspar

Match Rank:2
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TCTCTCTC--
NNAATTCTCGNTNAN

PB0114.1_Egr1_2/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TCTCTCTC----
NNAGTCCCACTCNNNN

MA0482.1_Gata4/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TCTCTCTC
TCTTATCTCCC

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TCTCTCTC--
ACTTTCACTTTC

MA0513.1_SMAD2::SMAD3::SMAD4/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TCTCTCTC--
CTGTCTGTCACCT

PB0138.1_Irf4_2/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TCTCTCTC------
AGTATTCTCGGTTGC

MA0035.3_Gata1/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TCTCTCTC
TTCTTATCTGT-

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TCTCTCTC--
TGTCTGDCACCT

MA0527.1_ZBTB33/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TCTCTCTC--------
-CTCTCGCGAGATCTG