Information for 5-ACACHCCA (Motif 3)


Reverse Opposite:

p-value:1e-141
log p-value:-3.256e+02
Information Content per bp:1.520
Number of Target Sequences with motif1798.0
Percentage of Target Sequences with motif13.87%
Number of Background Sequences with motif2304.6
Percentage of Background Sequences with motif7.39%
Average Position of motif in Targets99.3 +/- 54.7bp
Average Position of motif in Background100.6 +/- 90.8bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)2.34
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-ACACHCCA-
ATCACCCCAT

MA0090.1_TEAD1/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-ACACHCCA---
CACATTCCTCCG

MA0596.1_SREBF2/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-ACACHCCA-
ATCACCCCAT

PB0098.1_Zfp410_1/Jaspar

Match Rank:4
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----ACACHCCA-----
NNNTCCATCCCATAANN

MA0595.1_SREBF1/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-ACACHCCA-
ATCACCCCAC

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--ACACHCCA
AASCACTCAA

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:7
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ACACHCCA--
RCATTCCWGG

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-ACACHCCA-
RSCACTYRAG

POL002.1_INR/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:forward strand
Alignment:ACACHCCA
TCAGTCTT

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---ACACHCCA-
CNGTCACGCCAC