Information for 12-TAYACTATAC (Motif 9)


Reverse Opposite:

p-value:1e-67
log p-value:-1.558e+02
Information Content per bp:1.589
Number of Target Sequences with motif1831.0
Percentage of Target Sequences with motif14.12%
Number of Background Sequences with motif2917.8
Percentage of Background Sequences with motif9.36%
Average Position of motif in Targets102.7 +/- 54.8bp
Average Position of motif in Background100.3 +/- 81.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.59
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0040.1_Foxq1/Jaspar

Match Rank:1
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TAYACTATAC
AATAAACAATN-

MA0032.1_FOXC1/Jaspar

Match Rank:2
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:TAYACTATAC-----
-------TACTNNNN

PB0106.1_Arid5a_2/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TAYACTATAC-------
CATACAATACGAAATAA

PB0168.1_Sox14_2/Jaspar

Match Rank:4
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TAYACTATAC---
CTCACACAATGGCGC

MA0084.1_SRY/Jaspar

Match Rank:5
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-TAYACTATAC
GTAAACAAT--

MA0078.1_Sox17/Jaspar

Match Rank:6
Score:0.48
Offset:2
Orientation:reverse strand
Alignment:TAYACTATAC-
--GACAATGNN

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:7
Score:0.48
Offset:-5
Orientation:reverse strand
Alignment:-----TAYACTATAC
ATTTGCATACAATGG

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-TAYACTATAC
BCAGACWA---

PB0091.1_Zbtb3_1/Jaspar

Match Rank:9
Score:0.47
Offset:-3
Orientation:forward strand
Alignment:---TAYACTATAC----
AATCGCACTGCATTCCG

MA0108.2_TBP/Jaspar

Match Rank:10
Score:0.47
Offset:-10
Orientation:reverse strand
Alignment:----------TAYACTATAC
NNNNNNCTTTTATAN-----