Information for 17-TATATGCG (Motif 16)

A C G T G T C A C G A T C G T A A C G T A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G G T A C C G T A A C G T C G T A A C G T C G T A
p-value:1e-16
log p-value:-3.811e+01
Information Content per bp:1.957
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif101.2
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets107.3 +/- 56.3bp
Average Position of motif in Background69.5 +/- 65.8bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.39
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0163.1_Six6_2/Jaspar

Match Rank:1
Score:0.70
Offset:-6
Orientation:forward strand
Alignment:------TATATGCG---
ATGGGATATATCCGCCT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G A T C G T A A C G T A C T G A G T C A C T G A C G T A C G T A C G T
T G C A C G A T A T C G T A C G A C T G T C G A G A C T C T G A A C G T G T C A A G C T G T A C A G T C T C A G G A T C G A T C C A G T

GCM2/MA0767.1/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TATATGCG----
--TATGCGGGTA
 A C G T G T C A C G A T C G T A A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A

SRF/MA0083.3/Jaspar

Match Rank:3
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------TATATGCG--
TGNCCATATATGGTCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G A T C G T A A C G T A C T G A G T C A C T G A C G T A C G T
G C A T A C T G G T C A G A T C A T G C C G T A C G A T T G C A A G C T G C T A G C A T T C A G A T C G C A G T T G A C C G T A

Bhlha15/MA0607.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TATATGCG
ACATATGG-
 A C G T A C G T G T C A C G A T C G T A A C G T A C T G A G T C A C T G
T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TATATGCG-------
NNNNATGCGGGTNNNN
 A C G T A C G T G T C A C G A T C G T A A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TATATGCG-
GHATATKCAT
 A C G T A C G T G T C A C G A T C G T A A C G T A C T G A G T C A C T G A C G T
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TATATGCG-
TTTTATKRGG
 A C G T A C G T G T C A C G A T C G T A A C G T A C T G A G T C A C T G A C G T
C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G

POL012.1_TATA-Box/Jaspar

Match Rank:8
Score:0.60
Offset:-8
Orientation:reverse strand
Alignment:--------TATATGCG
NNNNNNCTTTTATAN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G A T C G T A A C G T A C T G A G T C A C T G
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T

TBP/MA0108.2/Jaspar

Match Rank:9
Score:0.59
Offset:-8
Orientation:reverse strand
Alignment:--------TATATGCG
NNNNNNCTTTTATAN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G A T C G T A A C G T A C T G A G T C A C T G
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TATATGCG---
-ATATGCAAAT
 A C G T G T C A C G A T C G T A A C G T A C T G A G T C A C T G A C G T A C G T A C G T
A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T