Information for 12-CCTAACCCTAAC (Motif 8)

A G T C A T G C A C G T C T G A T G C A A G T C A G T C A G T C A G C T C G T A G T C A A G T C
Reverse Opposite:
A C T G A C G T A C G T T C G A A C T G A C T G C T A G A C G T A G C T C G T A A T C G A C T G
p-value:1e-57
log p-value:-1.328e+02
Information Content per bp:1.976
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets100.4 +/- 51.2bp
Average Position of motif in Background79.3 +/- 47.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)12.47
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCTAACCCTAAC
GCTAATCC----
A G T C A T G C A C G T C T G A T G C A A G T C A G T C A G T C A G C T C G T A G T C A A G T C
A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T A C G T A C G T

ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCTAACCCTAAC----
-TTAACCCTTTVNKKN
A G T C A T G C A C G T C T G A T G C A A G T C A G T C A G T C A G C T C G T A G T C A A G T C A C G T A C G T A C G T A C G T
A C G T C A G T G A C T C G T A G C T A G T A C G A T C G T A C G A C T A G C T A C G T T G A C C G T A C A G T A C G T A T G C

OTX2/MA0712.2/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCTAACCCTAAC
NNCTAATCCCNN-
A C G T A G T C A T G C A C G T C T G A T G C A A G T C A G T C A G T C A G C T C G T A G T C A A G T C
G C A T G C A T G A T C G C A T C G T A G T C A C A G T G A T C G A T C G A T C G C A T C G A T A C G T

PITX1/MA0682.2/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CCTAACCCTAAC
-CTAATCCC---
A G T C A T G C A C G T C T G A T G C A A G T C A G T C A G T C A G C T C G T A G T C A A G T C
A C G T G A T C A C G T C G T A C G T A A C G T G T A C A G T C G T A C A C G T A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCTAACCCTAAC
CTTAATCCC---
A G T C A T G C A C G T C T G A T G C A A G T C A G T C A G T C A G C T C G T A G T C A A G T C
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T A C G T

PSE(SNAPc)/K562-mStart-Seq/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCTAACCCTAAC-------
WAVTCACCMTAASYDAAAAG
A C G T A G T C A T G C A C G T C T G A T G C A A G T C A G T C A G T C A G C T C G T A G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C T G A T A C G G A C T G A T C T C G A G A T C G A T C T G C A G A C T T C G A C G T A A T C G A G T C C G A T C G T A C G T A G T C A C G T A C T A G

Dmbx1/MA0883.1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCTAACCCTAAC--
NNNATTAATCCGNTTNA
A C G T A C G T A C G T A G T C A T G C A C G T C T G A T G C A A G T C A G T C A G T C A G C T C G T A G T C A A G T C A C G T A C G T
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCTAACCCTAAC--
NNNATTAATCCGNTTNA
A C G T A C G T A C G T A G T C A T G C A C G T C T G A T G C A A G T C A G T C A G T C A G C T C G T A G T C A A G T C A C G T A C G T
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CCTAACCCTAAC
-YTAATCCY---
A G T C A T G C A C G T C T G A T G C A A G T C A G T C A G T C A G C T C G T A G T C A A G T C
A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCTAACCCTAAC
CCTAATCCGC--
A G T C A T G C A C G T C T G A T G C A A G T C A G T C A G T C A G C T C G T A G T C A A G T C
T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C A C G T A C G T