Information for 19-MTCCCAGTAGGG (Motif 18)

T G A C A C G T A T G C A T G C G T A C G T C A A C T G A C G T G C T A A T C G A C T G A C T G
Reverse Opposite:
A G T C A G T C A T G C C G A T C G T A A G T C C A G T A C T G A T C G A T C G G T C A A C T G
p-value:1e-89
log p-value:-2.065e+02
Information Content per bp:1.795
Number of Target Sequences with motif107.0
Percentage of Target Sequences with motif0.17%
Number of Background Sequences with motif7.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets101.0 +/- 53.5bp
Average Position of motif in Background102.9 +/- 40.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-MTCCCAGTAGGG--
GCACAYAGTAGGKCY
 A C G T T G A C A C G T A T G C A T G C G T A C G T C A A C T G A C G T G C T A A T C G A C T G A C T G A C G T A C G T
C T A G G A T C T C G A A T G C T C G A A G C T C T G A A C T G A C G T C T G A A C T G A C T G A C G T A G T C G A T C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.67
Offset:2
Orientation:forward strand
Alignment:MTCCCAGTAGGG--
--CACAGCAGGGGG
 T G A C A C G T A T G C A T G C G T A C G T C A A C T G A C G T G C T A A T C G A C T G A C T G A C G T A C G T
A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

ZKSCAN1/MA1585.1/Jaspar

Match Rank:3
Score:0.67
Offset:3
Orientation:forward strand
Alignment:MTCCCAGTAGGG-
---ATAGTAGGTG
 T G A C A C G T A T G C A T G C G T A C G T C A A C T G A C G T G C T A A T C G A C T G A C T G A C G T
A C G T A C G T A C G T T C G A A G C T T G C A C T A G A C G T G T C A A T C G C A T G A G C T T A C G

Zic2/MA1629.1/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:MTCCCAGTAGGG--
CTCACAGCAGGGGG
 T G A C A C G T A T G C A T G C G T A C G T C A A C T G A C G T G C T A A T C G A C T G A C T G A C G T A C G T
T G A C C A G T T G A C G C T A T A G C G T C A T A C G A G T C C T G A C A T G A T C G C T A G T C A G T C A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:MTCCCAGTAGGG----
-DCHCAGCAGGRGGCC
 T G A C A C G T A T G C A T G C G T A C G T C A A C T G A C G T G C T A A T C G A C T G A C T G A C G T A C G T A C G T A C G T
A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:6
Score:0.66
Offset:2
Orientation:forward strand
Alignment:MTCCCAGTAGGG-
--CACAGCAGGGG
 T G A C A C G T A T G C A T G C G T A C G T C A A C T G A C G T G C T A A T C G A C T G A C T G A C G T
A C G T A C G T T A G C T C G A A G T C T G C A T A C G A G T C T C G A A T C G A C T G T A C G T C A G

Zic2(Zf)/ESC-Zic2-ChIP-Seq(SRP197560)/Homer

Match Rank:7
Score:0.65
Offset:2
Orientation:forward strand
Alignment:MTCCCAGTAGGG--
--CHCAGCRGGRGG
 T G A C A C G T A T G C A T G C G T A C G T C A A C T G A C G T G C T A A T C G A C T G A C T G A C G T A C G T
A C G T A C G T T G A C G T C A A G T C G C T A C T A G A G T C C T G A C A T G A C T G C T A G T A C G T C A G

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-MTCCCAGTAGGG--
CCACACAGCAGGAGA
 A C G T T G A C A C G T A T G C A T G C G T A C G T C A A C T G A C G T G C T A A T C G A C T G A C T G A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0205.1_Zic1_2/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-MTCCCAGTAGGG--
CCACACAGCAGGAGA
 A C G T T G A C A C G T A T G C A T G C G T A C G T C A A C T G A C G T G C T A A T C G A C T G A C T G A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:MTCCCAGTAGGG
-DCTCAGCAGG-
 T G A C A C G T A T G C A T G C G T A C G T C A A C T G A C G T G C T A A T C G A C T G A C T G
A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T