Information for 2-ACABWNTGTWCY (Motif 2)

C G T A A G T C G C T A A T C G C G A T T C A G G C A T A C T G G A C T C G A T G A T C G A C T
Reverse Opposite:
C T G A C T A G G C T A C T G A T G A C C G T A A G T C G C T A T A G C C G A T T C A G G C A T
p-value:1e-4422
log p-value:-1.018e+04
Information Content per bp:1.560
Number of Target Sequences with motif17600.0
Percentage of Target Sequences with motif27.26%
Number of Background Sequences with motif5097.1
Percentage of Background Sequences with motif8.22%
Average Position of motif in Targets100.8 +/- 46.2bp
Average Position of motif in Background100.0 +/- 67.3bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:1
Score:0.91
Offset:-2
Orientation:reverse strand
Alignment:--ACABWNTGTWCY-
GVACAGNMTGTYCTB
 A C G T A C G T C G T A A G T C G C T A A T C G C G A T T C A G G C A T A C T G G A C T C G A T G A T C G A C T A C G T
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.91
Offset:-2
Orientation:reverse strand
Alignment:--ACABWNTGTWCY-
GRACAGWMTGTYCTB
 A C G T A C G T C G T A A G T C G C T A A T C G C G A T T C A G G C A T A C T G G A C T C G A T G A T C G A C T A C G T
C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:3
Score:0.91
Offset:-2
Orientation:reverse strand
Alignment:--ACABWNTGTWCY-
GAACADWATGTTCTT
 A C G T A C G T C G T A A G T C G C T A A T C G C G A T T C A G G C A T A C T G G A C T C G A T G A T C G A C T A C G T
C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.89
Offset:-3
Orientation:forward strand
Alignment:---ACABWNTGTWCY-
AGNACAGNCTGTTCTN
 A C G T A C G T A C G T C G T A A G T C G C T A A T C G C G A T T C A G G C A T A C T G G A C T C G A T G A T C G A C T A C G T
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.89
Offset:-4
Orientation:forward strand
Alignment:----ACABWNTGTWCY
NAGNACANNNTGTNCT
 A C G T A C G T A C G T A C G T C G T A A G T C G C T A A T C G C G A T T C A G G C A T A C T G G A C T C G A T G A T C G A C T
T A C G C T G A C T A G T C G A C G T A A G T C C T G A A T C G G C A T T A G C G A C T A C T G A C G T A G C T A G T C G A C T

NR3C2/MA0727.1/Jaspar

Match Rank:6
Score:0.87
Offset:-4
Orientation:reverse strand
Alignment:----ACABWNTGTWCY-
GGGAACATTGTGTTCCC
 A C G T A C G T A C G T A C G T C G T A A G T C G C T A A T C G C G A T T C A G G C A T A C T G G A C T C G A T G A T C G A C T A C G T
C A T G T C A G C T A G C G T A C T G A A T G C C T G A G A C T G C A T C T A G G A C T A T C G A C G T G C A T G T A C G A T C G T A C

NR3C1/MA0113.3/Jaspar

Match Rank:7
Score:0.86
Offset:-4
Orientation:reverse strand
Alignment:----ACABWNTGTWCY-
NGGAACATNATGTACCC
 A C G T A C G T A C G T A C G T C G T A A G T C G C T A A T C G C G A T T C A G G C A T A C T G G A C T C G A T G A T C G A C T A C G T
C A T G C T A G C T A G C G T A T G C A T A G C C T G A G A C T G C A T C T G A G A C T A T C G G C A T G C T A G A T C G A T C G A T C

Ar/MA0007.3/Jaspar

Match Rank:8
Score:0.84
Offset:-4
Orientation:forward strand
Alignment:----ACABWNTGTWCY-
GGGAACACGGTGTACCC
 A C G T A C G T A C G T A C G T C G T A A G T C G C T A A T C G C G A T T C A G G C A T A C T G G A C T C G A T G A T C G A C T A C G T
C T A G C T A G C T A G G C T A G T C A T A G C T C G A A G T C T A C G T C A G G A C T A T C G G C A T C G T A G A T C G A T C G A T C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.70
Offset:5
Orientation:reverse strand
Alignment:ACABWNTGTWCY---
-----CTGTTCCTGG
 C G T A A G T C G C T A A T C G C G A T T C A G G C A T A C T G G A C T C G A T G A T C G A C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

ZSCAN4/MA1155.1/Jaspar

Match Rank:10
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---ACABWNTGTWCY
TTTTCAGTGTGTGCA
 A C G T A C G T A C G T C G T A A G T C G C T A A T C G C G A T T C A G G C A T A C T G G A C T C G A T G A T C G A C T
G A C T G A C T C A G T G C A T T G A C T G C A C A T G A C G T C T A G G A C T A C T G C G A T A T C G A G T C C T G A