Information for 6-BTGCCARNNN (Motif 4)

A G T C C G A T A C T G A T G C A G T C C G T A C T G A C T A G C G T A A T G C
Reverse Opposite:
T A C G G C A T G A T C A G C T A C G T A C T G A T C G A G T C C G T A T C A G
p-value:1e-913
log p-value:-2.104e+03
Information Content per bp:1.656
Number of Target Sequences with motif17335.0
Percentage of Target Sequences with motif26.85%
Number of Background Sequences with motif10347.2
Percentage of Background Sequences with motif16.69%
Average Position of motif in Targets100.2 +/- 54.3bp
Average Position of motif in Background99.5 +/- 64.3bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.98
Offset:0
Orientation:forward strand
Alignment:BTGCCARNNN
TTGCCAAG--
 A G T C C G A T A C T G A T G C A G T C C G T A C T G A C T A G C G T A A T G C
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-BTGCCARNNN
CGTGCCAAG--
 A C G T A G T C C G A T A C T G A T G C A G T C C G T A C T G A C T A G C G T A A T G C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-BTGCCARNNN
GGTGCCAAGT-
 A C G T A G T C C G A T A C T G A T G C A G T C C G T A C T G A C T A G C G T A A T G C
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:4
Score:0.88
Offset:1
Orientation:forward strand
Alignment:BTGCCARNNN
-TGCCAGCB-
 A G T C C G A T A C T G A T G C A G T C C G T A C T G A C T A G C G T A A T G C
A C G T G A C T C T A G A T G C A G T C G T C A T A C G A T G C A T C G A C G T

NFIC/MA0161.2/Jaspar

Match Rank:5
Score:0.84
Offset:-1
Orientation:reverse strand
Alignment:-BTGCCARNNN
NNTGCCAAGNN
 A C G T A G T C C G A T A C T G A T G C A G T C C G T A C T G A C T A G C G T A A T G C
G C A T T A G C G C A T C T A G G T A C A G T C C G T A T G C A A C T G C G A T C T G A

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.81
Offset:1
Orientation:forward strand
Alignment:BTGCCARNNN
-TGTCANYT-
 A G T C C G A T A C T G A T G C A G T C C G T A C T G A C T A G C G T A A T G C
A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:7
Score:0.81
Offset:0
Orientation:forward strand
Alignment:BTGCCARNNN
ATGCCAACC-
 A G T C C G A T A C T G A T G C A G T C C G T A C T G A C T A G C G T A A T G C
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-BTGCCARNNN
RHTGWCAR---
 A C G T A G T C C G A T A C T G A T G C A G T C C G T A C T G A C T A G C G T A A T G C
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-BTGCCARNNN
VBTGWCAGCB-
 A C G T A G T C C G A T A C T G A T G C A G T C C G T A C T G A C T A G C G T A A T G C
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:10
Score:0.74
Offset:0
Orientation:forward strand
Alignment:BTGCCARNNN
TTGACAGC--
 A G T C C G A T A C T G A T G C A G T C C G T A C T G A C T A G C G T A A T G C
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T