Information for 8-TAAATATTTG (Motif 5)

G A C T G T C A G T C A C T G A A G C T G T C A A C G T A C G T C A G T C T A G
Reverse Opposite:
A G T C G T C A C G T A T G C A A C G T C T G A G A C T A C G T C A G T C T G A
p-value:1e-896
log p-value:-2.065e+03
Information Content per bp:1.874
Number of Target Sequences with motif4732.0
Percentage of Target Sequences with motif7.33%
Number of Background Sequences with motif1545.7
Percentage of Background Sequences with motif2.49%
Average Position of motif in Targets101.9 +/- 55.1bp
Average Position of motif in Background98.2 +/- 60.3bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.79
Offset:-4
Orientation:reverse strand
Alignment:----TAAATATTTG
NNTNNCAATATTAG
 A C G T A C G T A C G T A C G T G A C T G T C A G T C A C T G A A G C T G T C A A C G T A C G T C A G T C T A G
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.79
Offset:-4
Orientation:reverse strand
Alignment:----TAAATATTTG
NNTNNCAATATTAG
 A C G T A C G T A C G T A C G T G A C T G T C A G T C A C T G A A G C T G T C A A C G T A C G T C A G T C T A G
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

MF0010.1_Homeobox_class/Jaspar

Match Rank:3
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TAAATATTTG
--AATAATT-
 G A C T G T C A G T C A C T G A A G C T G T C A A C G T A C G T C A G T C T A G
A C G T A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:4
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----TAAATATTTG
TATGTAAATAT---
 A C G T A C G T A C G T A C G T G A C T G T C A G T C A C T G A A G C T G T C A A C G T A C G T C A G T C T A G
G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T A C G T A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----TAAATATTTG
TATGTAAATAT---
 A C G T A C G T A C G T A C G T G A C T G T C A G T C A C T G A A G C T G T C A A C G T A C G T C A G T C T A G
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TAAATATTTG
ATGAATATTC-
 A C G T G A C T G T C A G T C A C T G A A G C T G T C A A C G T A C G T C A G T C T A G
G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C A C G T

LHX2/MA0700.2/Jaspar

Match Rank:7
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TAAATATTTG---
--NNTAATTGGNN
 G A C T G T C A G T C A C T G A A G C T G T C A A C G T A C G T C A G T C T A G A C G T A C G T A C G T
A C G T A C G T C G T A G C A T C G A T C G T A G C T A C G A T C G A T C T A G T A C G G C A T G C A T

PH0028.1_En1/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TAAATATTTG--
GNATTAATTAGTTNNC
 A C G T A C G T A C G T A C G T G A C T G T C A G T C A C T G A A G C T G T C A A C G T A C G T C A G T C T A G A C G T A C G T
A C T G G A T C T G C A G A C T G A C T C G T A C G T A A G C T A G C T C T G A C T A G A C G T A C G T A G T C A T C G A G T C

FOXA1/MA0148.4/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TAAATATTTG
ATGTAAACATGT-
 A C G T A C G T A C G T G A C T G T C A G T C A C T G A A G C T G T C A A C G T A C G T C A G T C T A G
C G T A C G A T C T A G G A C T T G C A G T C A C G T A G A T C G C T A C G A T C A T G C G A T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TAAATATTTG---
-GAATGTTTGTTT
 G A C T G T C A G T C A C T G A A G C T G T C A A C G T A C G T C A G T C T A G A C G T A C G T A C G T
A C G T C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T