Information for 11-CAGTACGTGC (Motif 9)

T G A C G C T A C T A G C A G T C G T A T A G C T A C G C A G T C A T G G T A C
Reverse Opposite:
C A T G G T A C G T C A A T G C A T C G G C A T G T C A A G T C C G A T A C T G
p-value:1e-312
log p-value:-7.200e+02
Information Content per bp:1.626
Number of Target Sequences with motif5869.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif3355.9
Percentage of Background Sequences with motif5.41%
Average Position of motif in Targets99.4 +/- 54.0bp
Average Position of motif in Background100.8 +/- 66.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF1A/MA1106.1/Jaspar

Match Rank:1
Score:0.75
Offset:2
Orientation:forward strand
Alignment:CAGTACGTGC--
--GTACGTGCCC
 T G A C G C T A C T A G C A G T C G T A T A G C T A C G C A G T C A T G G T A C A C G T A C G T
A C G T A C G T T A C G A G C T C G T A A G T C C T A G A G C T T C A G G T A C A T G C A T G C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:2
Score:0.73
Offset:2
Orientation:forward strand
Alignment:CAGTACGTGC
--RTACGTGC
 T G A C G C T A C T A G C A G T C G T A T A G C T A C G C A G T C A T G G T A C
A C G T A C G T C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:3
Score:0.72
Offset:2
Orientation:forward strand
Alignment:CAGTACGTGC
--GGACGTGC
 T G A C G C T A C T A G C A G T C G T A T A G C T A C G C A G T C A T G G T A C
A C G T A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:4
Score:0.71
Offset:3
Orientation:forward strand
Alignment:CAGTACGTGC-
---TACGTGCV
 T G A C G C T A C T A G C A G T C G T A T A G C T A C G C A G T C A T G G T A C A C G T
A C G T A C G T A C G T A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:5
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CAGTACGTGC
GGGTACGTGC
 T G A C G C T A C T A G C A G T C G T A T A G C T A C G C A G T C A T G G T A C
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C

SOHLH2/MA1560.1/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CAGTACGTGC-
-CGCACGTGCA
 T G A C G C T A C T A G C A G T C G T A T A G C T A C G C A G T C A T G G T A C A C G T
A C G T G A T C A C T G G A T C C T G A A T G C C A T G G A C T C T A G T G A C T C G A

ASCL1(var.2)/MA1631.1/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CAGTACGTGC---
CAGCACCTGCCCC
 T G A C G C T A C T A G C A G T C G T A T A G C T A C G C A G T C A T G G T A C A C G T A C G T A C G T
A T G C C G T A T A C G A T G C C T G A A T G C T A G C A G C T T A C G A T G C G A T C A T G C A T G C

TCF4/MA0830.2/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CAGTACGTGC---
CGGCACCTGCCCC
 T G A C G C T A C T A G C A G T C G T A T A G C T A C G C A G T C A T G G T A C A C G T A C G T A C G T
A T G C C A T G T A C G T A G C T C G A A T G C T A G C A G C T T A C G A T G C G A T C A T G C A T G C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CAGTACGTGC--
SNGCACCTGCHS
 T G A C G C T A C T A G C A G T C G T A T A G C T A C G C A G T C A T G G T A C A C G T A C G T
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:10
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CAGTACGTGC--
GVACAGNMTGTYCTB
 A C G T A C G T A C G T T G A C G C T A C T A G C A G T C G T A T A G C T A C G C A G T C A T G G T A C A C G T A C G T
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G