Information for 7-CTGGCAGG (Motif 16)

G A T C C G A T A C T G T A C G A G T C C G T A C T A G T A C G
Reverse Opposite:
A T G C G A T C C G A T C T A G A T G C G T A C C G T A C T A G
p-value:1e-35
log p-value:-8.224e+01
Information Content per bp:1.716
Number of Target Sequences with motif1132.0
Percentage of Target Sequences with motif27.26%
Number of Background Sequences with motif8393.2
Percentage of Background Sequences with motif19.22%
Average Position of motif in Targets100.4 +/- 55.1bp
Average Position of motif in Background101.5 +/- 64.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.91
Offset:0
Orientation:forward strand
Alignment:CTGGCAGG
TTGCCAAG
 G A T C C G A T A C T G T A C G A G T C C G T A C T A G T A C G
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:2
Score:0.85
Offset:-2
Orientation:reverse strand
Alignment:--CTGGCAGG
VGCTGGCA--
 A C G T A C G T G A T C C G A T A C T G T A C G A G T C C G T A C T A G T A C G
T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-CTGGCAGG
NTTGGCANN
 A C G T G A T C C G A T A C T G T A C G A G T C C G T A C T A G T A C G
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-CTGGCAGG-
VBTGWCAGCB
 A C G T G A T C C G A T A C T G T A C G A G T C C G T A C T A G T A C G A C G T
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

MEIS2/MA0774.1/Jaspar

Match Rank:5
Score:0.77
Offset:0
Orientation:forward strand
Alignment:CTGGCAGG
TTGACAGC
 G A T C C G A T A C T G T A C G A G T C C G T A C T A G T A C G
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-CTGGCAGG
RHTGWCAR-
 A C G T G A T C C G A T A C T G T A C G A G T C C G T A C T A G T A C G
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--CTGGCAGG
ARNTGACA--
 A C G T A C G T G A T C C G A T A C T G T A C G A G T C C G T A C T A G T A C G
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:8
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--CTGGCAGG
NNTTGGCANN
 A C G T A C G T G A T C C G A T A C T G T A C G A G T C C G T A C T A G T A C G
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

MEIS3/MA0775.1/Jaspar

Match Rank:9
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CTGGCAGG
TTGACAGG
 G A T C C G A T A C T G T A C G A G T C C G T A C T A G T A C G
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

NFIC/MA0161.2/Jaspar

Match Rank:10
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CTGGCAGG--
NNTGCCAAGNN
 A C G T G A T C C G A T A C T G T A C G A G T C C G T A C T A G T A C G A C G T A C G T
G C A T T A G C G C A T C T A G G T A C A G T C C G T A T G C A A C T G C G A T C T G A