Information for 11-TAGGCTAC (Motif 20)

A C G T C G T A A C T G A C T G A G T C A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A C T G A G T C A G T C A C G T C G T A
p-value:1e-17
log p-value:-3.927e+01
Information Content per bp:1.530
Number of Target Sequences with motif54.0
Percentage of Target Sequences with motif1.30%
Number of Background Sequences with motif135.7
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets92.9 +/- 50.8bp
Average Position of motif in Background102.4 +/- 68.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0154.1_Osr1_2/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TAGGCTAC-------
ACATGCTACCTAATAC
 A C G T A C G T C G T A A C T G A C T G A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TAGGCTAC
TWGTCTGV
 A C G T C G T A A C T G A C T G A G T C A C G T C G T A A G T C
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

PB0051.1_Osr2_1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TAGGCTAC-------
CNNNGCTACTGTANNN
 A C G T A C G T C G T A A C T G A C T G A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

OSR1/MA1542.1/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TAGGCTAC----
--TGCTACTGTT
 A C G T C G T A A C T G A C T G A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G A C T T C A G A G T C G A C T G C T A G T A C A G C T C T A G A G C T C A G T

PB0155.1_Osr2_2/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TAGGCTAC-------
ACTTGCTACCTACACC
 A C G T A C G T C G T A A C T G A C T G A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

PB0050.1_Osr1_1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TAGGCTAC-------
TNNTGCTACTGTNNNN
 A C G T A C G T C G T A A C T G A C T G A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TAGGCTAC
--NGCTN-
 A C G T C G T A A C T G A C T G A G T C A C G T C G T A A G T C
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

POL013.1_MED-1/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TAGGCTAC-
---GCTCCG
 A C G T C G T A A C T G A C T G A G T C A C G T C G T A A G T C A C G T
A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

PB0181.1_Spdef_2/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TAGGCTAC----
CTACTAGGATGTNNTN
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:10
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------TAGGCTAC-
KGTTGCTAGGMAACA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G A G T C A C G T C G T A A G T C A C G T
C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A