Information for 18-GCNGCYGCCG (Motif 21)

A T C G A T G C G T A C A T C G A T G C A G T C C A T G A T G C A G T C T A C G
Reverse Opposite:
A T G C T C A G T A C G G T A C T C A G A T C G T A G C C A T G A T C G T A G C
p-value:1e-14
log p-value:-3.262e+01
Information Content per bp:1.559
Number of Target Sequences with motif66.0
Percentage of Target Sequences with motif1.59%
Number of Background Sequences with motif226.0
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets94.6 +/- 53.7bp
Average Position of motif in Background104.6 +/- 49.0bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ascl2(bHLH)/ESC-Ascl2-ChIP-Seq(GSE97712)/Homer

Match Rank:1
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-GCNGCYGCCG-
DGCAGCTGCYSS
 A C G T A T C G A T G C G T A C A T C G A T G C A G T C C A T G A T G C A G T C T A C G A C G T
C T G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A T C A T G C A T G C

PB0003.1_Ascl2_1/Jaspar

Match Rank:2
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----GCNGCYGCCG--
NNNNAGCAGCTGCTGAN
 A C G T A C G T A C G T A C G T A C G T A T C G A T G C G T A C A T C G A T G C A G T C C A T G A T G C A G T C T A C G A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

ASCL1/MA1100.2/Jaspar

Match Rank:3
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GCNGCYGCCG
NGCAGCTGCN-
 A C G T A T C G A T G C G T A C A T C G A T G C A G T C C A T G A T G C A G T C T A C G
T C A G T C A G G A T C G T C A A T C G T A G C C G A T C T A G A G T C A G T C A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:4
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GCNGCYGCCG
CGCAGCTGCG-
 A C G T A T C G A T G C G T A C A T C G A T G C A G T C C A T G A T G C A G T C T A C G
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:5
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GCNGCYGCCG-
AGCAGCTGCTNN
 A C G T A T C G A T G C G T A C A T C G A T G C A G T C C A T G A T G C A G T C T A C G A C G T
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GCNGCYGCCG
NCAGCTGCTG
 A T C G A T G C G T A C A T C G A T G C A G T C C A T G A T G C A G T C T A C G
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

MYOG/MA0500.2/Jaspar

Match Rank:7
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GCNGCYGCCG
CAGCAGCTGCTG
 A C G T A C G T A T C G A T G C G T A C A T C G A T G C A G T C C A T G A T G C A G T C T A C G
T A G C C T G A T C A G A G T C T C G A A C T G T G A C A G C T T C A G A G T C G A C T A T C G

Ascl2/MA0816.1/Jaspar

Match Rank:8
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GCNGCYGCCG
AGCAGCTGCT-
 A C G T A T C G A T G C G T A C A T C G A T G C A G T C C A T G A T G C A G T C T A C G
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T

BHLHE22(var.2)/MA1635.1/Jaspar

Match Rank:9
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GCNGCYGCCG
NNCAGCTGNN-
 A C G T A T C G A T G C G T A C A T C G A T G C A G T C C A T G A T G C A G T C T A C G
A T G C T A C G A T G C T C G A A T C G T A G C A G C T T C A G A T G C T A C G A C G T

ASCL1(var.2)/MA1631.1/Jaspar

Match Rank:10
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GCNGCYGCCG-
CAGCACCTGCCCC
 A C G T A C G T A T C G A T G C G T A C A T C G A T G C A G T C C A T G A T G C A G T C T A C G A C G T
A T G C C G T A T A C G A T G C C T G A A T G C T A G C A G C T T A C G A T G C G A T C A T G C A T G C