Information for 16-GGCAGTCT (Motif 23)

A C T G A C T G A G T C G T C A A C T G A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A G T C A C G T A C T G A G T C A G T C
p-value:1e-13
log p-value:-3.171e+01
Information Content per bp:1.976
Number of Target Sequences with motif75.0
Percentage of Target Sequences with motif1.81%
Number of Background Sequences with motif283.2
Percentage of Background Sequences with motif0.65%
Average Position of motif in Targets98.7 +/- 52.6bp
Average Position of motif in Background104.6 +/- 64.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGCAGTCT--
VBSYGTCTGG
 A C T G A C T G A G T C G T C A A C T G A C G T A G T C A C G T A C G T A C G T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GGCAGTCT--
--CTGTCTGG
 A C T G A C T G A G T C G T C A A C T G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

PB0149.1_Myb_2/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GGCAGTCT----
NNNTGGCAGTTGGTNN
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C G T C A A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

PB0203.1_Zfp691_2/Jaspar

Match Rank:4
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----GGCAGTCT----
NTNNNAGGAGTCTCNTN
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C G T C A A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GGCAGTCT
TNNGGGCAG---
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C G T C A A C T G A C G T A G T C A C G T
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GGCAGTCT--
--TWGTCTGV
 A C T G A C T G A G T C G T C A A C T G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

POL002.1_INR/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GGCAGTCT-
-TCAGTCTT
 A C T G A C T G A G T C G T C A A C T G A C G T A G T C A C G T A C G T
A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T

ETV5/MA0765.2/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GGCAGTCT
NCCGGAAGTNN
 A C G T A C G T A C G T A C T G A C T G A G T C G T C A A C T G A C G T A G T C A C G T
T C A G T A G C T G A C T A C G T A C G T C G A C T G A T A C G A G C T T A C G T A C G

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGCAGTCT-
TGGCAGTTGG
 A C G T A C T G A C T G A G T C G T C A A C T G A C G T A G T C A C G T A C G T
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G

Elf4(ETS)/BMDM-Elf4-ChIP-Seq(GSE88699)/Homer

Match Rank:10
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GGCAGTCT
AMCMGGAAGT--
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C G T C A A C T G A C G T A G T C A C G T
C G T A G T C A T A G C T G C A A C T G T A C G T C G A G C T A T C A G G A C T A C G T A C G T