Information for 23-AGAGAGAGAGAS (Motif 26)

T G C A A T C G C T G A T A C G C T G A T A C G C T G A T A C G C G T A T A C G C G T A A T C G
Reverse Opposite:
T A G C G C A T A T G C G C A T A T G C A G C T A T G C G A C T A T G C A G C T T A G C A C G T
p-value:1e-6
log p-value:-1.513e+01
Information Content per bp:1.692
Number of Target Sequences with motif168.0
Percentage of Target Sequences with motif4.05%
Number of Background Sequences with motif1174.4
Percentage of Background Sequences with motif2.69%
Average Position of motif in Targets94.9 +/- 49.7bp
Average Position of motif in Background102.7 +/- 63.9bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.3/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AGAGAGAGAGAS
NAGAGAAAGNA--
 A C G T T G C A A T C G C T G A T A C G C T G A T A C G C T G A T A C G C G T A T A C G C G T A A T C G
C T G A C T G A C A T G G C T A C A T G G C T A C G T A G C T A C A T G C G T A C T G A A C G T A C G T

Stat2/MA1623.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGAGAGAGAGAS-
AGAAACAGAAACT
 T G C A A T C G C T G A T A C G C T G A T A C G C T G A T A C G C G T A T A C G C G T A A T C G A C G T
C T G A C T A G C T G A G C T A T C G A T A G C G C T A C T A G T C G A C T G A T C G A T A G C G C A T

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AGAGAGAGAGAS
RHHCAGAGAGGB--
 A C G T A C G T T G C A A T C G C T G A T A C G C T G A T A C G C T G A T A C G C G T A T A C G C G T A A T C G
T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGAGAGAGAGAS
GAAAGTGAAAGT-
 A C G T T G C A A T C G C T G A T A C G C T G A T A C G C T G A T A C G C G T A T A C G C G T A A T C G
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGAGAGAGAGAS-
-GAAAGTGAAAGT
 T G C A A T C G C T G A T A C G C T G A T A C G C T G A T A C G C G T A T A C G C G T A A T C G A C G T
A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

PRDM4/MA1647.1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGAGAGAGAGAS
-NAGAAACAGNN
 T G C A A T C G C T G A T A C G C T G A T A C G C T G A T A C G C G T A T A C G C G T A A T C G
A C G T C G A T C G T A C A T G C G T A T C G A C G T A A G T C G C T A A T C G G T C A G A T C

PB0166.1_Sox12_2/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGAGAGAGAGAS----
AAACAGACAAAGGAAT
 T G C A A T C G C T G A T A C G C T G A T A C G C T G A T A C G C G T A T A C G C G T A A T C G A C G T A C G T A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGAGAGAGAGAS-
-GAAACTGAAACT
 T G C A A T C G C T G A T A C G C T G A T A C G C T G A T A C G C G T A T A C G C G T A A T C G A C G T
A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

PB0140.1_Irf6_2/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---AGAGAGAGAGAS
NNNACCGAGAGTNNN
 A C G T A C G T A C G T T G C A A T C G C T G A T A C G C T G A T A C G C T G A T A C G C G T A T A C G C G T A A T C G
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AGAGAGAGAGAS
AGGTGNCAGACAG
 A C G T T G C A A T C G C T G A T A C G C T G A T A C G C T G A T A C G C G T A T A C G C G T A A T C G
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G