Information for 2-CTGTATGAGGTG (Motif 3)

A G T C G A C T C T A G A C G T C G T A A C G T A T C G C G T A A C T G A C T G A C G T C A T G
Reverse Opposite:
G A T C C G T A A G T C A G T C A C G T A T G C C G T A A C G T C G T A A G T C C T G A A C T G
p-value:1e-87
log p-value:-2.014e+02
Information Content per bp:1.870
Number of Target Sequences with motif48.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets95.6 +/- 52.4bp
Average Position of motif in Background173.6 +/- 2.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX3/MA0684.2/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CTGTATGAGGTG--
--NNTTGAGGTTNN
 A G T C G A C T C T A G A C G T C G T A A C G T A T C G C G T A A C T G A C T G A C G T C A T G A C G T A C G T
A C G T A C G T C T G A C G A T G A C T C G A T A C T G G C T A A C T G C T A G G A C T A G C T C G A T G C A T

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CTGTATGAGGTG
TNCCATATATGG--
 A C G T A C G T A G T C G A C T C T A G A C G T C G T A A C G T A T C G C G T A A C T G A C T G A C G T C A T G
C A G T A C T G G A T C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G A T C G A C G T A C G T

ATF2/MA1632.1/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CTGTATGAGGTG---
--AAATGAGGTCATT
 A G T C G A C T C T A G A C G T C G T A A C G T A T C G C G T A A C T G A C T G A C G T C A T G A C G T A C G T A C G T
A C G T A C G T C G T A C T G A T C G A G A C T C A T G G C T A A C T G T C A G G C A T G T A C C T G A A G C T G A C T

SREBF1(var.2)/MA0829.2/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CTGTATGAGGTG----
--NNATCAGGTGATNN
 A G T C G A C T C T A G A C G T C G T A A C G T A T C G C G T A A C T G A C T G A C G T C A T G A C G T A C G T A C G T A C G T
A C G T A C G T C T G A T C A G T C G A C G A T T A G C C G T A A T C G T A C G C G A T T A C G C G T A A G C T A G T C G A C T

SREBF1/MA0595.1/Jaspar

Match Rank:5
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CTGTATGAGGTG--
----GTGGGGTGAT
 A G T C G A C T C T A G A C G T C G T A A C G T A T C G C G T A A C T G A C T G A C G T C A T G A C G T A C G T
A C G T A C G T A C G T A C G T T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T

SREBF2/MA0596.1/Jaspar

Match Rank:6
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CTGTATGAGGTG--
----ATGGGGTGAT
 A G T C G A C T C T A G A C G T C G T A A C G T A T C G C G T A A C T G A C T G A C G T C A T G A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T

SIX1/MA1118.1/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CTGTATGAGGTG--
---TATCAGGTTAC
 A G T C G A C T C T A G A C G T C G T A A C G T A T C G C G T A A C T G A C T G A C G T C A T G A C G T A C G T
A C G T A C G T A C G T C A G T T G C A G C A T G A T C C G T A C A T G C T A G G C A T C G A T G C T A G T A C

PB0078.1_Srf_1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CTGTATGAGGTG
TTCCATATATGGAA
 A C G T A C G T A G T C G A C T C T A G A C G T C G T A A C G T A T C G C G T A A C T G A C T G A C G T C A T G
G C A T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A G C A T C T A G C A T G G C A T G T C A

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:9
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CTGTATGAGGTG
-----TGACGT-
 A G T C G A C T C T A G A C G T C G T A A C G T A T C G C G T A A C T G A C T G A C G T C A T G
A C G T A C G T A C G T A C G T A C G T A C G T C A T G C G T A A G T C A C T G G A C T A C G T

MF0008.1_MADS_class/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTGTATGAGGTG
CCATATATGG--
 A G T C G A C T C T A G A C G T C G T A A C G T A T C G C G T A A C T G A C T G A C G T C A T G
G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G A C G T A C G T