Information for 4-GTACTTCTTTGT (Motif 4)

T C A G G C A T G C T A G T A C G C A T A C G T G A T C G A C T G C A T C G A T T C A G A G C T
Reverse Opposite:
C T G A A G T C C G T A C G T A C T G A C T A G T G C A C G T A C A T G C G A T C G T A A G T C
p-value:1e-81
log p-value:-1.872e+02
Information Content per bp:1.691
Number of Target Sequences with motif306.0
Percentage of Target Sequences with motif7.37%
Number of Background Sequences with motif868.9
Percentage of Background Sequences with motif1.99%
Average Position of motif in Targets98.7 +/- 50.6bp
Average Position of motif in Background99.7 +/- 60.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---GTACTTCTTTGT-----
NNTGTTCTTTTTTGTTTACT
 A C G T A C G T A C G T T C A G G C A T G C T A G T A C G C A T A C G T G A T C G A C T G C A T C G A T T C A G A G C T A C G T A C G T A C G T A C G T A C G T
G C A T G C T A C G A T A T C G G C A T C G A T G A T C G A C T G C A T A G C T A G C T A G C T G C A T T C A G A C G T A C G T A C G T C T G A G A T C G C A T

PB0071.1_Sox4_1/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GTACTTCTTTGT------
-TNNTCCTTTGTTCTNNT
 T C A G G C A T G C T A G T A C G C A T A C G T G A T C G A C T G C A T C G A T T C A G A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

PB0166.1_Sox12_2/Jaspar

Match Rank:3
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GTACTTCTTTGT------
--ANTCCTTTGTCTNNNN
 T C A G G C A T G C T A G T A C G C A T A C G T G A T C G A C T G C A T C G A T T C A G A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

SOX10/MA0442.2/Jaspar

Match Rank:4
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:GTACTTCTTTGT---
----NNCTTTGTTNN
 T C A G G C A T G C T A G T A C G C A T A C G T G A T C G A C T G C A T C G A T T C A G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T

PB0061.1_Sox11_1/Jaspar

Match Rank:5
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GTACTTCTTTGT------
-NNNTCCTTTGTTCTNNN
 T C A G G C A T G C T A G T A C G C A T A C G T G A T C G A C T G C A T C G A T T C A G A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

SOX4/MA0867.2/Jaspar

Match Rank:6
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:GTACTTCTTTGT--
----NCCTTTGTTC
 T C A G G C A T G C T A G T A C G C A T A C G T G A T C G A C T G C A T C G A T T C A G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A G T C G A T C C G A T A G C T A G C T T A C G C G A T A G C T G A T C

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:7
Score:0.65
Offset:5
Orientation:forward strand
Alignment:GTACTTCTTTGT---
-----CCWTTGTYYB
 T C A G G C A T G C T A G T A C G C A T A C G T G A T C G A C T G C A T C G A T T C A G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:8
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GTACTTCTTTGT
--ACTTCCTBGT
 T C A G G C A T G C T A G T A C G C A T A C G T G A T C G A C T G C A T C G A T T C A G A G C T
A C G T A C G T T C G A A G T C A G C T C G A T A G T C A T G C A C G T A T G C T C A G C G A T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:9
Score:0.63
Offset:5
Orientation:forward strand
Alignment:GTACTTCTTTGT---
-----YCTTTGTTCC
 T C A G G C A T G C T A G T A C G C A T A C G T G A T C G A C T G C A T C G A T T C A G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer

Match Rank:10
Score:0.63
Offset:4
Orientation:forward strand
Alignment:GTACTTCTTTGT----
----BCCWTTGTBYKV
 T C A G G C A T G C T A G T A C G C A T A C G T G A T C G A C T G C A T C G A T T C A G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A T G C G A C T A C T G T A C G