Information for 2-CABHNTGTAC (Motif 5)

A G T C C G T A A C T G G C A T C G T A G C A T C A T G G C A T G C T A G A T C
Reverse Opposite:
C T A G C G A T C G T A G T A C C G T A G C A T C G T A T G A C G C A T T C A G
p-value:1e-77
log p-value:-1.777e+02
Information Content per bp:1.544
Number of Target Sequences with motif1306.0
Percentage of Target Sequences with motif31.45%
Number of Background Sequences with motif8417.5
Percentage of Background Sequences with motif19.27%
Average Position of motif in Targets103.1 +/- 52.7bp
Average Position of motif in Background98.4 +/- 68.5bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.26
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:1
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---CABHNTGTAC--
GVACAGNMTGTYCTB
 A C G T A C G T A C G T A G T C C G T A A C T G G C A T C G T A G C A T C A T G G C A T G C T A G A T C A C G T A C G T
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---CABHNTGTAC--
GRACAGWMTGTYCTB
 A C G T A C G T A C G T A G T C C G T A A C T G G C A T C G T A G C A T C A T G G C A T G C T A G A T C A C G T A C G T
C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:3
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---CABHNTGTAC--
GAACADWATGTTCTT
 A C G T A C G T A C G T A G T C C G T A A C T G G C A T C G T A G C A T C A T G G C A T G C T A G A T C A C G T A C G T
C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T

NR3C1/MA0113.3/Jaspar

Match Rank:4
Score:0.76
Offset:-5
Orientation:reverse strand
Alignment:-----CABHNTGTAC--
NGGAACATNATGTACCC
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G G C A T C G T A G C A T C A T G G C A T G C T A G A T C A C G T A C G T
C A T G C T A G C T A G C G T A T G C A T A G C C T G A G A C T G C A T C T G A G A C T A T C G G C A T G C T A G A T C G A T C G A T C

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----CABHNTGTAC--
AGNACAGNCTGTTCTN
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G G C A T C G T A G C A T C A T G G C A T G C T A G A T C A C G T A C G T
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T

NR3C2/MA0727.1/Jaspar

Match Rank:6
Score:0.75
Offset:-5
Orientation:reverse strand
Alignment:-----CABHNTGTAC--
GGGAACATTGTGTTCCC
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G G C A T C G T A G C A T C A T G G C A T G C T A G A T C A C G T A C G T
C A T G T C A G C T A G C G T A C T G A A T G C C T G A G A C T G C A T C T A G G A C T A T C G A C G T G C A T G T A C G A T C G T A C

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.75
Offset:-5
Orientation:forward strand
Alignment:-----CABHNTGTAC-
NAGNACANNNTGTNCT
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G G C A T C G T A G C A T C A T G G C A T G C T A G A T C A C G T
T A C G C T G A C T A G T C G A C G T A A G T C C T G A A T C G G C A T T A G C G A C T A C T G A C G T A G C T A G T C G A C T

Ar/MA0007.3/Jaspar

Match Rank:8
Score:0.73
Offset:-5
Orientation:forward strand
Alignment:-----CABHNTGTAC--
GGGAACACGGTGTACCC
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G G C A T C G T A G C A T C A T G G C A T G C T A G A T C A C G T A C G T
C T A G C T A G C T A G G C T A G T C A T A G C T C G A A G T C T A C G T C A G G A C T A T C G G C A T C G T A G A T C G A T C G A T C

ZBTB32/MA1580.1/Jaspar

Match Rank:9
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CABHNTGTAC-
-ATACTGTACA
 A G T C C G T A A C T G G C A T C G T A G C A T C A T G G C A T G C T A G A T C A C G T
A C G T G C T A G A C T C T G A T G A C G C A T A T C G A C G T G C T A G A T C C G T A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:CABHNTGTAC----
----CTGTTCCTGG
 A G T C C G T A A C T G G C A T C G T A G C A T C A T G G C A T G C T A G A T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G