Information for 7-GTGAGTACAT (Motif 4)

C T A G A C G T A C T G C G T A A C T G A C G T C G T A A T G C C G T A C G A T
Reverse Opposite:
C G T A C G A T A T C G A C G T C G T A A G T C A C G T A G T C G T C A A G T C
p-value:1e-5
log p-value:-1.331e+01
Information Content per bp:1.922
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif62.6
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets97.6 +/- 63.8bp
Average Position of motif in Background94.9 +/- 53.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MSANTD3/MA1523.1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GTGAGTACAT
GTGAGTGNAC
 C T A G A C G T A C T G C G T A A C T G A C G T C G T A A T G C C G T A C G A T
C A T G C A G T C T A G C G T A C T A G G C A T C T A G A C G T T G C A T A G C

PB0096.1_Zfp187_1/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GTGAGTACAT--
TTATTAGTACATAN
 A C G T A C G T C T A G A C G T A C T G C G T A A C T G A C G T C G T A A T G C C G T A C G A T A C G T A C G T
C A G T C G A T C G T A G A C T C G A T T C G A C T A G G A C T G C T A A G T C C T G A A G C T C T G A T C G A

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GTGAGTACAT
TTAAGTGCTT
 C T A G A C G T A C T G C G T A A C T G A C G T C G T A A T G C C G T A C G A T
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

VDR/MA0693.2/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GTGAGTACAT
-TGAGTTCA-
 C T A G A C G T A C T G C G T A A C T G A C G T C G T A A T G C C G T A C G A T
A C G T G A C T T C A G C T G A A C T G A C G T C A G T G A T C C T G A A C G T

PH0117.1_Nkx3-1/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GTGAGTACAT----
NATTTAAGTACTTANNA
 A C G T A C G T A C G T C T A G A C G T A C T G C G T A A C T G A C G T C G T A A T G C C G T A C G A T A C G T A C G T A C G T A C G T
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GTGAGTACAT-----
TTCNAAGTACTTNNNNN
 A C G T A C G T C T A G A C G T A C T G C G T A A C T G A C G T C G T A A T G C C G T A C G A T A C G T A C G T A C G T A C G T A C G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

DUXA/MA0884.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTGAGTACAT---
NTGATTAAATTAN
 C T A G A C G T A C T G C G T A A C T G A C G T C G T A A T G C C G T A C G A T A C G T A C G T A C G T
G A C T G C A T T C A G T G C A A G C T A C G T T C G A T C G A C T G A A G C T G A C T C T G A C T A G

PH0112.1_Nkx2-3/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GTGAGTACAT----
CTTTAAGTACTTAATG
 A C G T A C G T C T A G A C G T A C T G C G T A A C T G A C G T C G T A A T G C C G T A C G A T A C G T A C G T A C G T A C G T
G A T C A G C T A G C T G C A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C T G A G A C T C T A G

Foxl2/MA1607.1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTGAGTACAT---
NNTGTTTACATANN
 A C G T C T A G A C G T A C T G C G T A A C T G A C G T C G T A A T G C C G T A C G A T A C G T A C G T A C G T
A G C T C G A T C G A T C T A G G A C T C G A T C A G T G C T A G A T C G C T A G C A T G C T A G C A T G A C T

PB0104.1_Zscan4_1/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GTGAGTACAT---
NTNTATGTGCACATNNN
 A C G T A C G T A C G T A C G T C T A G A C G T A C T G C G T A A C T G A C G T C G T A A T G C C G T A C G A T A C G T A C G T A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A