Motif 7

Information for 22-CGSCGCCGCSGC (Motif 7)

Reverse Opposite:

p-value:	1e-1
log p-value:	-3.456e+00
Information Content per bp:	1.504
Number of Target Sequences with motif	23.0
Percentage of Target Sequences with motif	0.49%
Number of Background Sequences with motif	141.1
Percentage of Background Sequences with motif	0.32%
Average Position of motif in Targets	111.1 +/- 66.9bp
Average Position of motif in Background	98.6 +/- 46.3bp
Strand Bias (log2 ratio + to - strand density)	-0.1
Multiplicity (# of sites on avg that occur together)	1.22
Motif File:	file (matrix) reverse opposite
SVG Files for Logos:	forward logo reverse opposite

Matches to Known Motifs

PB0010.1_Egr1_1/Jaspar

Match Rank:	1
Score:	0.63
Offset:	1
Orientation:	forward strand
Alignment:	CGSCGCCGCSGC--- -TCCGCCCCCGCATT

NRF1/MA0506.1/Jaspar

Match Rank:	2
Score:	0.61
Offset:	1
Orientation:	reverse strand
Alignment:	CGSCGCCGCSGC -TGCGCAGGCGC

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:	3
Score:	0.58
Offset:	0
Orientation:	forward strand
Alignment:	CGSCGCCGCSGC CTGCGCATGCGC

Zfx/MA0146.2/Jaspar

Match Rank:	4
Score:	0.56
Offset:	1
Orientation:	forward strand
Alignment:	CGSCGCCGCSGC--- -GGGGCCGAGGCCTG

EGR3/MA0732.1/Jaspar

Match Rank:	5
Score:	0.56
Offset:	0
Orientation:	forward strand
Alignment:	CGSCGCCGCSGC--- CTACGCCCACGCACT

EGR1/MA0162.4/Jaspar

Match Rank:	6
Score:	0.56
Offset:	0
Orientation:	forward strand
Alignment:	CGSCGCCGCSGC-- CCACGCCCACGCCC

KLF15/MA1513.1/Jaspar

Match Rank:	7
Score:	0.55
Offset:	-1
Orientation:	forward strand
Alignment:	-CGSCGCCGCSGC GCCCCGCCCCC--

Sp1(Zf)/Promoter/Homer

Match Rank:	8
Score:	0.55
Offset:	1
Orientation:	reverse strand
Alignment:	CGSCGCCGCSGC- -GGGGGCGGGGCC

PB0101.1_Zic1_1/Jaspar

Match Rank:	9
Score:	0.54
Offset:	0
Orientation:	reverse strand
Alignment:	CGSCGCCGCSGC-- CCCCCCCGGGGGNN

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:	10
Score:	0.53
Offset:	0
Orientation:	reverse strand
Alignment:	CGSCGCCGCSGC- TGCCCNNAGGGCA