1	chr1	1005546	1005547	chunk0001_11_1	4.93365	AR_DHT_Control	chr1	1005446	1005607	-247950815	-	MLT1H	LTR	ERVL-MaLR	-294	255	48	1
2	chr1	3767805	3767806	chunk0001_112_1	8.06501	AR_DHT_Control	chr1	3767798	3767921	-245188501	-	MIR	SINE	MIR	-15	247	124	4
3	chr1	4144574	4144575	chunk0001_118_1	31.16983	SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh;AR_DHT_Control	chr1	4144323	4144933	-244811489	+	(TCA)n	Simple_repeat	Simple_repeat	1	617	0	4
4	chr1	6052785	6052786	chunk0001_148_1	10.0524	AR_DHT_Control	chr1	6052768	6052920	-242903502	-	MER53	DNA	hAT	-28	165	1	7
5	chr1	6399019	6399020	chunk0001_164_1	7.42871	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	6398769	6399550	-242556872	+	L2a	LINE	L2	2300	3420	-6	8
6	chr1	6928941	6928942	chunk0001_177_1	54.11072	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	6928614	6928973	-242027449	+	L2b	LINE	L2	2966	3362	-13	9
7	chr1	10056441	10056442	chunk0001_364_1	17.41301	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	10056408	10056565	-238899857	-	L2a	LINE	L2	-1	3425	3268	1
8	chr1	1577498	1577499	chunk0001_39_1	5.0408	AR_DHT_Control	chr1	1577276	1578972	-247377450	+	MER52A	LTR	ERV1	1	1755	0	1
9	chr1	10661992	10661993	chunk0001_392_1	4.62745	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	10661368	10662760	-238293662	+	(AC)n	Simple_repeat	Simple_repeat	1	1420	0	1
10	chr1	11586428	11586429	chunk0001_440_1	9.01771	AR_DHT_Control	chr1	11586202	11586452	-237369970	-	MIRb	SINE	MIR	-15	253	3	1
11	chr1	11759479	11759480	chunk0001_446_1	8.45722	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	11759382	11759515	-237196907	-	MIRc	SINE	MIR	0	268	145	1
12	chr1	11808543	11808544	chunk0001_448_1	8.06943	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	11808393	11808790	-237147632	-	L1MC5	LINE	L1	-149	9155	8731	1
13	chr1	1847442	1847443	chunk0001_47_1	8.24382	AR_DHT_Control	chr1	1846859	1848097	-247108325	+	Tigger2	DNA	TcMar-Tigger	984	2245	-473	2
14	chr1	2121300	2121301	chunk0001_59_1	4.9245	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	2121151	2121339	-246835083	-	MLT-int	LTR	ERVL-MaLR	-26	1709	1496	2
15	chr1	2583995	2583996	chunk0001_78_1	7.30485	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	2583978	2584292	-246372130	+	MLT1I	LTR	ERVL-MaLR	64	394	-17	3
16	chr1	2896946	2896947	chunk0001_91_1	7.99358	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	2896562	2897217	-246059205	+	(CA)n	Simple_repeat	Simple_repeat	2	645	0	3
17	chr1	15820980	15820981	chunk0002_111_1	60.1668	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	15820772	15820987	-233135435	+	AluJr	SINE	Alu	85	302	-10	2
18	chr1	12202380	12202381	chunk0002_13_1	4.73293	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	12202224	12202619	-236753803	+	L2c	LINE	L2	2925	3348	-39	1
19	chr1	17012146	17012147	chunk0002_139_1	7.36432	AR_DHT_Control	chr1	17012089	17012262	-231944160	+	MIRb	SINE	MIR	25	207	-61	2
20	chr1	17866885	17866886	chunk0002_149_1	6.48643	AR_DHT_Control	chr1	17866728	17866909	-231089513	+	MIR3	SINE	MIR	16	198	-10	3
21	chr1	18165707	18165708	chunk0002_156_1	17.67436	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	18165572	18166162	-230790260	+	LTR10C	LTR	ERV1	1	591	0	3
22	chr1	18166536	18166537	chunk0002_157_1	5.86499	AR_DHT_Control	chr1	18166349	18166598	-230789824	+	MIRb	SINE	MIR	4	250	-18	3
23	chr1	18298879	18298880	chunk0002_162_1	45.7629	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	18298825	18298951	-230657471	+	L2a	LINE	L2	3287	3421	-5	3
24	chr1	19427359	19427360	chunk0002_191_1	118.4056	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	19427177	19427466	-229528956	-	MamRep434	DNA	TcMar-Tigger	-105	321	6	3
25	chr1	19987857	19987858	chunk0002_225_1	17.33585	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	19987484	19988110	-228968312	-	L1MC4a	LINE	L1	-1861	6021	5464	3
26	chr1	21310190	21310191	chunk0002_257_1	17.1871	AR_DHT_Control	chr1	21310162	21310574	-227645848	-	MLT1K	LTR	ERVL-MaLR	-116	479	40	3
27	chr1	23830401	23830402	chunk0002_308_1	37.6171	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	23830217	23830441	-225125981	+	L1MB4	LINE	L1	5696	5923	-257	4
28	chr1	23997953	23997954	chunk0002_313_1	11.1716	AR_DHT_Control	chr1	23997824	23998467	-224957955	+	L1MB5	LINE	L1	5520	6174	0	4
29	chr1	25032536	25032537	chunk0002_342_1	46.17046	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	25032385	25033152	-223923270	-	Tigger13a	DNA	TcMar-Tigger	-1	770	4	4
30	chr1	25141983	25141984	chunk0002_344_1	7.80475	AR_DHT_Control	chr1	25141929	25142102	-223814320	-	MIR3	SINE	MIR	-27	181	10	4
31	chr1	26235174	26235175	chunk0002_369_1	12.1095	AR_DHT_Control	chr1	26235153	26235233	-222721189	+	L2b	LINE	L2	3291	3371	-4	4
32	chr1	26939738	26939739	chunk0002_391_1	6.13982	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	26939698	26939858	-222016564	-	MER5A	DNA	hAT-Charlie	-18	171	10	5
33	chr1	27234624	27234625	chunk0002_397_1	12.6114	Merged_Lncap_AR_Veh	chr1	27234575	27234625	-221721797	+	(CGCAGG)n	Simple_repeat	Simple_repeat	1	50	0	5
34	chr1	27272746	27272747	chunk0002_398_1	6.48643	AR_DHT_Control	chr1	27272693	27272922	-221683500	+	AluJr	SINE	Alu	64	300	-12	5
35	chr1	28248407	28248408	chunk0002_442_1	7.38582	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	28248317	28248471	-220707951	+	MIR3	SINE	MIR	46	201	-7	5
36	chr1	14159741	14159742	chunk0002_75_1	7.92341	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	14158074	14160688	-234795734	-	L1MA2	LINE	L1	-4895	2670	16	2
37	chr1	32570612	32570613	chunk0003_126_1	6.79799	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	32569920	32570876	-216385546	-	L1ME2	LINE	L1	-1036	5608	4662	6
38	chr1	33377135	33377136	chunk0003_162_1	14.61107	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	33377072	33377287	-215579135	+	MIRb	SINE	MIR	26	262	-6	6
39	chr1	33688119	33688120	chunk0003_183_1	5.89231	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	33687910	33688314	-215268108	+	L1ME3G	LINE	L1	495	636	-288	6
40	chr1	34113697	34113698	chunk0003_193_1	5.73469	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	34113632	34114040	-214842382	+	L1MB2	LINE	L1	675	1068	-5497	6
41	chr1	29136581	29136582	chunk0003_21_1	8.66151	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	29136548	29136674	-219819748	-	L1ME4c	LINE	L1	-320	510	380	5
42	chr1	35688214	35688215	chunk0003_230_1	30.73825	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	35687916	35688216	-213268206	+	AluSz	SINE	Alu	1	299	-13	6
43	chr1	37464314	37464315	chunk0003_286_1	4.73293	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	37464145	37464588	-211491834	+	Charlie21a	DNA	hAT-Charlie	780	1211	-2	7
44	chr1	38951222	38951223	chunk0003_336_1	9.78588	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	38951074	38951285	-210005137	-	MER103C	DNA	hAT-Charlie	-12	285	81	7
45	chr1	30216722	30216723	chunk0003_35_1	7.74912	AR_DHT_Control	chr1	30216439	30217081	-218739341	+	(AC)n	Simple_repeat	Simple_repeat	1	644	0	5
46	chr1	30250759	30250760	chunk0003_36_1	9.35087	AR_DHT_Control	chr1	30250722	30250849	-218705573	-	MIRb	SINE	MIR	-89	179	65	5
47	chr1	39366639	39366640	chunk0003_361_1	20.63115	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	39366496	39366696	-209589726	-	L1MC5a	LINE	L1	-1682	4464	4229	7
48	chr1	30502446	30502447	chunk0003_38_1	21.0778	AR_DHT_Control	chr1	30502359	30502629	-218453793	+	MLT1C	LTR	ERVL-MaLR	176	463	-4	5
49	chr1	40030845	40030846	chunk0003_401_1	50.4628	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	40030249	40030959	-208925463	+	L2b	LINE	L2	2647	3361	-14	7
50	chr1	40339064	40339065	chunk0003_414_1	6.48643	AR_DHT_Control	chr1	40339015	40339174	-208617248	+	MIRb	SINE	MIR	3	164	-104	7
51	chr1	41432467	41432468	chunk0003_448_1	15.4138	AR_DHT_Control	chr1	41432330	41432520	-207523902	+	MLT1B	LTR	ERVL-MaLR	1	194	-171	8
52	chr1	41773283	41773284	chunk0003_459_1	7.62365	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	41773099	41773336	-207183086	-	MIRb	SINE	MIR	-15	253	3	8
53	chr1	41790445	41790446	chunk0003_462_1	36.39079	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	41790104	41790492	-207165930	+	MSTB1	LTR	ERVL-MaLR	1	432	0	8
54	chr1	31277325	31277326	chunk0003_69_1	89.9394	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	31277216	31277395	-217679027	+	L1ME4a	LINE	L1	5930	6109	-15	6
55	chr1	31422584	31422585	chunk0003_78_1	12.2543	AR_DHT_Control	chr1	31422464	31422655	-217533767	+	L2c	LINE	L2	3119	3317	-70	6
56	chr1	31768229	31768230	chunk0003_88_1	7.59394	AR_DHT_Control	chr1	31768146	31768870	-217187552	+	L2a	LINE	L2	2598	3426	0	6
57	chr1	44730811	44730812	chunk0004_130_1	6.25826	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	44730708	44730899	-204225523	+	AluSx4	SINE	Alu	7	221	-89	8
58	chr1	44899233	44899234	chunk0004_139_1	22.421	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	44899157	44899338	-204057084	-	L1ME1	LINE	L1	-8	6171	5995	8
59	chr1	45551241	45551242	chunk0004_162_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	45551236	45551450	-203404972	+	MIRb	SINE	MIR	13	256	-6	8
60	chr1	46182056	46182057	chunk0004_188_1	6.29634	AR_DHT_Control	chr1	46181953	46182103	-202774319	-	L2b	LINE	L2	-723	2696	2538	8
61	chr1	46846959	46846960	chunk0004_220_1	104.5498	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	46846137	46850891	-202105531	+	L1PA5	LINE	L1	4	4710	-1436	9
62	chr1	47592173	47592174	chunk0004_250_1	4.56189	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	47591313	47592203	-201364219	+	(GT)n	Simple_repeat	Simple_repeat	1	915	0	9
63	chr1	47809861	47809862	chunk0004_256_1	6.58135	AR_DHT_Control	chr1	47809788	47809910	-201146512	+	MIR3	SINE	MIR	21	146	-84	9
64	chr1	48396335	48396336	chunk0004_272_1	26.16638	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	48395819	48396950	-200559472	+	L1MB3	LINE	L1	5087	6183	0	9
65	chr1	50821729	50821730	chunk0004_343_1	5.55081	AR_DHT_Control	chr1	50821543	50821761	-198134661	+	MIR	SINE	MIR	20	248	-14	9
66	chr1	51467197	51467198	chunk0004_354_1	48.7794	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	51466875	51467579	-197488843	+	L1ME4b	LINE	L1	9	651	-241	9
67	chr1	51679753	51679754	chunk0004_375_1	17.22251	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	51679502	51680009	-197276413	+	MER44B	DNA	TcMar-Tigger	1	549	-1	9
68	chr1	51956550	51956551	chunk0004_391_1	5.95209	AR_DHT_Control	chr1	51956497	51956720	-196999702	+	L2b	LINE	L2	2918	3138	-237	9
69	chr1	52126062	52126063	chunk0004_397_1	8.15319	AR_DHT_Control	chr1	52125768	52126368	-196830054	-	Tigger6a	DNA	TcMar-Tigger	-441	642	1	1
70	chr1	52259915	52259916	chunk0004_405_1	6.36834	AR_DHT_Control	chr1	52259862	52260322	-196696100	-	L1ME3G	LINE	L1	-328	596	88	1
71	chr1	52307083	52307084	chunk0004_408_1	13.71612	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	52305489	52307095	-196649327	+	MER52A	LTR	ERV1	1	1755	0	1
72	chr1	42931845	42931846	chunk0004_42_1	5.33775	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	42931543	42931852	-206024570	+	AluSz	SINE	Alu	1	307	-5	8
73	chr1	52523611	52523612	chunk0004_421_1	7.69414	AR_DHT_Control	chr1	52523323	52523626	-196432796	+	AluSz	SINE	Alu	1	311	-1	1
74	chr1	52574770	52574771	chunk0004_422_1	4.74037	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	52574592	52574972	-196381450	+	L2c	LINE	L2	2990	3387	0	1
75	chr1	43492812	43492813	chunk0004_71_1	7.62093	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	43492693	43493121	-205463301	-	LTR3B	LTR	ERVK	-4	433	1	8
76	chr1	43550350	43550351	chunk0004_75_1	6.05516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	43550347	43550386	-205406036	+	(GCCCC)n	Simple_repeat	Simple_repeat	1	39	0	8
77	chr1	43793370	43793371	chunk0004_92_1	13.3182	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	43793230	43793468	-205162954	-	L1MA3	LINE	L1	0	6305	6068	8
78	chr1	43831046	43831047	chunk0004_93_1	9.35087	AR_DHT_Control	chr1	43830975	43831186	-205125236	-	MIRc	SINE	MIR	-14	254	19	8
79	chr1	43847902	43847903	chunk0004_97_1	18.32205	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	43847809	43848289	-205108133	-	L1MEc	LINE	L1	-4481	1919	1413	8
80	chr1	53919224	53919225	chunk0005_1_1	13.2288	AR_DHT_Control	chr1	53919152	53919277	-195037145	+	MLT1H	LTR	ERVL-MaLR	43	167	-322	1
81	chr1	56765128	56765129	chunk0005_116_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	56765072	56765923	-192190499	-	L1MDa	LINE	L1	-5731	902	18	1
82	chr1	56765810	56765811	chunk0005_117_1	6.54035	AR_DHT_Control	chr1	56765072	56765923	-192190499	-	L1MDa	LINE	L1	-5731	902	18	1
83	chr1	57011803	57011804	chunk0005_128_1	7.41979	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	57011708	57011876	-191944546	-	MIRb	SINE	MIR	-17	251	54	1
84	chr1	58118995	58118996	chunk0005_150_1	11.9693	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	58118962	58119035	-190837387	+	MER33	DNA	hAT-Charlie	8	90	-2534	1
85	chr1	58295061	58295062	chunk0005_159_1	18.94994	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	58295049	58295271	-190661151	+	L2b	LINE	L2	3137	3375	0	1
86	chr1	58483523	58483524	chunk0005_163_1	5.59693	AR_DHT_Control	chr1	58483509	58483621	-190472801	+	L2c	LINE	L2	3288	3383	-4	1
87	chr1	59460792	59460793	chunk0005_234_1	22.9912	AR_DHT_Control	chr1	59460097	59461770	-189494652	+	L1PA6	LINE	L1	175	1856	-4328	1
88	chr1	59831674	59831675	chunk0005_268_1	7.67158	AR_DHT_Control	chr1	59831162	59831882	-189124540	-	L1ME1	LINE	L1	-5626	774	63	1
89	chr1	59917450	59917451	chunk0005_273_1	5.69226	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	59917352	59917516	-189038906	-	MIR	SINE	MIR	-37	225	40	1
90	chr1	60126956	60126957	chunk0005_292_1	6.6833	AR_DHT_Control	chr1	60126786	60127946	-188828476	+	ERVL-E-int	LTR	ERVL	4051	5245	-422	1
91	chr1	54601088	54601089	chunk0005_30_1	4.83532	AR_DHT_Control	chr1	54601066	54601204	-194355218	+	(GT)n	Simple_repeat	Simple_repeat	1	138	0	1
92	chr1	60388134	60388135	chunk0005_302_1	6.22495	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	60388047	60388453	-188567969	-	LTR16A1	LTR	ERVL	-7	449	8	1
93	chr1	60765199	60765200	chunk0005_319_1	15.00521	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	60765129	60765270	-188191152	+	MER58A	DNA	hAT-Charlie	65	224	0	1
94	chr1	54725043	54725044	chunk0005_32_1	4.63316	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	54724772	54725624	-194230798	+	L1M4	LINE	L1	1	846	-6671	1
95	chr1	54834235	54834236	chunk0005_33_1	31.9155	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	54834148	54834246	-194122176	+	L2b	LINE	L2	3061	3166	-209	1
96	chr1	61143923	61143924	chunk0005_338_1	19.85371	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	61143872	61144028	-187812394	+	Tigger15a	DNA	TcMar-Tigger	86	251	-464	1
97	chr1	54834946	54834947	chunk0005_34_1	12.90298	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	54834896	54835043	-194121379	-	L1ME2z	LINE	L1	-95	6349	6199	1
98	chr1	54881217	54881218	chunk0005_37_1	43.6852	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	54881169	54882144	-194074278	+	L1PA13	LINE	L1	5162	6163	0	1
99	chr1	61700613	61700614	chunk0005_376_1	42.1484	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	61700610	61700658	-187255764	-	L2b	LINE	L2	-3	3372	3325	1
100	chr1	62659801	62659802	chunk0005_414_1	25.17201	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	62658974	62660392	-186296030	+	L1MDa	LINE	L1	1935	3361	-3176	1
101	chr1	62707529	62707530	chunk0005_419_1	28.90336	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	62707122	62707791	-186248631	-	L2c	LINE	L2	-15	3372	2711	1
102	chr1	54888527	54888528	chunk0005_43_1	50.5775	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	54888143	54888563	-194067859	+	L2b	LINE	L2	2932	3374	-1	1
103	chr1	63245364	63245365	chunk0005_434_1	26.09449	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	63245158	63245576	-185710846	-	MLT1A1	LTR	ERVL-MaLR	-1	407	2	1
104	chr1	63298993	63298994	chunk0005_438_1	13.2288	AR_DHT_Control	chr1	63298934	63299090	-185657332	+	L2c	LINE	L2	3231	3386	-1	1
105	chr1	63421065	63421066	chunk0005_443_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	63420932	63421153	-185535269	-	L2a	LINE	L2	-5	3421	3181	1
106	chr1	55149690	55149691	chunk0005_53_1	11.0099	AR_DHT_Control	chr1	55149589	55149896	-193806526	+	Kanga11a	DNA	TcMar-Tc2	1	311	-659	1
107	chr1	55781161	55781162	chunk0005_69_1	21.02921	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	55779895	55783183	-193173239	-	ERVL-int	LTR	ERVL	0	5757	2244	1
108	chr1	56007759	56007760	chunk0005_79_1	5.0408	AR_DHT_Control	chr1	56007485	56008333	-192948089	+	LTR82A	LTR	ERVL	20	865	-7	1
109	chr1	56240101	56240102	chunk0005_88_1	17.07294	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	56239893	56240690	-192715732	+	L1MC5	LINE	L1	8506	9289	-15	1
110	chr1	56340222	56340223	chunk0005_90_1	5.36932	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	56339826	56340459	-192615963	+	L1M2c	LINE	L1	8	657	-6132	1
111	chr1	65277043	65277044	chunk0006_101_1	8.27376	AR_DHT_Control	chr1	65276662	65277123	-183679299	-	L1MEg	LINE	L1	-5768	467	10	1
112	chr1	65719514	65719515	chunk0006_119_1	7.27655	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	65717010	65719916	-183236506	-	L1M1	LINE	L1	-4630	2935	23	1
113	chr1	65764211	65764212	chunk0006_123_1	36.7997	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	65764089	65764604	-183191818	+	LTR37-int	LTR	ERV1	3430	3965	-95	1
114	chr1	67880257	67880258	chunk0006_212_1	17.55529	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	67880221	67880294	-181076128	+	L2b	LINE	L2	3294	3364	-11	1
115	chr1	68078526	68078527	chunk0006_214_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	68078313	68079151	-180877271	-	L1PA14	LINE	L1	-5797	892	4	1
116	chr1	68851907	68851908	chunk0006_235_1	13.8979	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	68851137	68852192	-180104230	-	L1PB3	LINE	L1	-363	5791	4705	1
117	chr1	70355139	70355140	chunk0006_275_1	5.82105	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	70355067	70355173	-178601249	-	L2b	LINE	L2	-4	3383	3274	1
118	chr1	71463066	71463067	chunk0006_315_1	9.54045	AR_DHT_Control	chr1	71463006	71463282	-177493140	-	L2a	LINE	L2	0	3426	3163	1
119	chr1	71473511	71473512	chunk0006_318_1	6.35715	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	71473463	71474063	-177482359	+	LTR80B	LTR	ERVL	1	579	-5	1
120	chr1	71875617	71875618	chunk0006_329_1	6.48643	AR_DHT_Control	chr1	71875555	71875685	-177080737	-	MER91A	DNA	hAT-Tip100	-66	130	1	1
121	chr1	73203523	73203524	chunk0006_369_1	30.3634	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	73203440	73203742	-175752680	+	L1M4c	LINE	L1	3529	3875	-2851	1
122	chr1	64349307	64349308	chunk0006_38_1	5.46037	AR_DHT_Control	chr1	64349002	64349715	-184606707	+	(GT)n	Simple_repeat	Simple_repeat	1	758	0	1
123	chr1	75969696	75969697	chunk0006_412_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	75969358	75969907	-172986515	-	L2c	LINE	L2	0	3375	2815	1
124	chr1	76752114	76752115	chunk0006_443_1	9.28589	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	76752073	76752244	-172204178	+	Tigger19a	DNA	TcMar-Tigger	136	322	-1	1
125	chr1	64564499	64564500	chunk0006_58_1	13.52479	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	64564004	64564610	-184391812	+	MER34C2	LTR	ERV1	3	555	0	1
126	chr1	64727574	64727575	chunk0006_63_1	23.6354	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	64727479	64727575	-184228847	+	L3b	LINE	CR1	4964	5067	-165	1
127	chr1	64872591	64872592	chunk0006_72_1	31.5634	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	64872359	64872686	-184083736	+	L2a	LINE	L2	3102	3426	0	1
128	chr1	64932693	64932694	chunk0006_74_1	4.88212	AR_DHT_Control	chr1	64932608	64932718	-184023704	-	L1MD3	LINE	L1	0	8042	7887	1
129	chr1	78878568	78878569	chunk0007_106_1	14.2024	AR_DHT_Control	chr1	78872619	78880488	-170075934	+	HERVH-int	LTR	ERV1	1	7713	0	1
130	chr1	79133262	79133263	chunk0007_126_1	63.8592	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	79132742	79133472	-169822950	+	HAL1	LINE	L1	1113	1958	-549	1
131	chr1	79190773	79190774	chunk0007_132_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	79190612	79191087	-169765335	+	LTR1F	LTR	ERV1	296	772	0	1
132	chr1	79346861	79346862	chunk0007_142_1	6.73207	AR_DHT_Control	chr1	79346533	79347325	-169609097	-	Tigger3b	DNA	TcMar-Tigger	-389	842	1	1
133	chr1	79474218	79474219	chunk0007_146_1	5.33775	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	79474198	79474226	-169482196	+	(AC)n	Simple_repeat	Simple_repeat	1	28	0	1
134	chr1	79893920	79893921	chunk0007_161_1	13.2288	AR_DHT_Control	chr1	79888611	79894731	-169061691	-	L1PA3	LINE	L1	0	6155	4	1
135	chr1	80730341	80730342	chunk0007_184_1	23.8143	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	80730189	80730853	-168225569	-	ERVL-E-int	LTR	ERVL	-2513	3154	2472	1
136	chr1	81005061	81005062	chunk0007_192_1	9.02033	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	81004937	81005385	-167951037	+	LTR16B	LTR	ERVL	2	461	-2	1
137	chr1	81660332	81660333	chunk0007_218_1	20.55168	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	81660311	81660487	-167295935	-	MamSINE1	SINE	tRNA-RTE	-69	221	12	1
138	chr1	82850439	82850440	chunk0007_256_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	82850306	82850496	-166105926	-	LTR33	LTR	ERVL	-316	199	5	1
139	chr1	84779271	84779272	chunk0007_337_1	7.09275	AR_DHT_Control	chr1	84779149	84779388	-164177034	-	L2a	LINE	L2	-124	3302	3044	1
140	chr1	84805567	84805568	chunk0007_338_1	11.10966	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	84805515	84805713	-164150709	-	L1ME4c	LINE	L1	-281	549	350	1
141	chr1	77667455	77667456	chunk0007_34_1	15.26856	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	77667263	77667575	-171288847	-	L3	LINE	CR1	-1495	2604	2240	1
142	chr1	84835300	84835301	chunk0007_345_1	35.9721	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	84834745	84835956	-164120466	-	L3	LINE	CR1	0	4099	2879	1
143	chr1	84947666	84947667	chunk0007_364_1	7.78444	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	84947239	84947983	-164008439	+	L1M2	LINE	L1	393	1412	-6154	1
144	chr1	85355803	85355804	chunk0007_386_1	14.28006	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	85355618	85356223	-163600199	+	L1ME3D	LINE	L1	5611	6242	0	1
145	chr1	85504461	85504462	chunk0007_400_1	15.94008	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	85504360	85504518	-163451904	-	MamGypsy2-LTR	LTR	Gypsy	-5	178	22	1
146	chr1	77745533	77745534	chunk0007_41_1	30.9497	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	77744859	77745606	-171210816	-	L1P1	LINE	L1	-3428	2718	1982	1
147	chr1	86281578	86281579	chunk0007_421_1	6.6833	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	86280522	86282644	-162673778	+	ERVL-B4-int	LTR	ERVL	3541	5714	0	1
148	chr1	86971117	86971118	chunk0007_449_1	26.82614	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	86971084	86971175	-161985247	-	L2c	LINE	L2	-1	3386	3301	1
149	chr1	78549650	78549651	chunk0007_89_1	140.28838	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;Merged_Lncap_AR_Veh	chr1	78548415	78549851	-170406571	+	L1PA16	LINE	L1	4125	5531	-635	1
150	chr1	91253603	91253604	chunk0008_102_1	6.26854	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	91252942	91255672	-157700750	+	L1PREC2	LINE	L1	2	4183	-3972	1
151	chr1	91338570	91338571	chunk0008_105_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	91337868	91340017	-157616405	+	L1PA14	LINE	L1	193	2362	-4327	1
152	chr1	91430040	91430041	chunk0008_107_1	5.59693	AR_DHT_Control	chr1	91429849	91430292	-157526130	+	MLT1D	LTR	ERVL-MaLR	5	504	-1	1
153	chr1	87372833	87372834	chunk0008_12_1	7.67158	AR_DHT_Control	chr1	87372761	87372855	-161583567	+	MLT1O	LTR	ERVL-MaLR	104	190	-352	1
154	chr1	92006082	92006083	chunk0008_137_1	4.40478	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	92005974	92006251	-156950171	-	L1MEc	LINE	L1	-3238	3081	2785	1
155	chr1	92315666	92315667	chunk0008_148_1	10.4004	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	92315645	92315730	-156640692	+	X7A_LINE	LINE	CR1	121	221	-46	1
156	chr1	93908497	93908498	chunk0008_221_1	10.5437	AR_DHT_Control	chr1	93908475	93908555	-155047867	-	L1MA4A	LINE	L1	-59	6241	6172	1
157	chr1	93945049	93945050	chunk0008_223_1	10.1791	AR_DHT_Control	chr1	93944471	93945169	-155011253	-	L1MA6	LINE	L1	-3	6297	5608	1
158	chr1	94004425	94004426	chunk0008_226_1	20.37101	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	94003937	94005227	-154951195	-	L1MC4a	LINE	L1	-979	6903	5583	1
159	chr1	94490651	94490652	chunk0008_254_1	17.0078	AR_DHT_Control	chr1	94490098	94491149	-154465273	-	L1MA9	LINE	L1	-16	6296	5263	1
160	chr1	94646610	94646611	chunk0008_269_1	5.98896	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	94646461	94646617	-154309805	-	L2c	LINE	L2	0	3375	3246	1
161	chr1	94738717	94738718	chunk0008_274_1	6.7814	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	94737944	94738786	-154217636	-	L1PA16	LINE	L1	-1	6165	5294	1
162	chr1	95138585	95138586	chunk0008_311_1	10.6202	AR_DHT_Control	chr1	95138433	95138905	-153817517	-	Tigger3b	DNA	TcMar-Tigger	0	1231	946	1
163	chr1	95189594	95189595	chunk0008_315_1	5.6425	AR_DHT_Control	chr1	95188441	95190092	-153766330	-	L1MC3	LINE	L1	-625	7160	5428	1
164	chr1	88683912	88683913	chunk0008_33_1	5.95444	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	88683884	88683929	-160272493	+	A-rich	Low_complexity	Low_complexity	1	45	0	1
165	chr1	96029045	96029046	chunk0008_347_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	96028017	96029468	-152926954	-	MER52A	LTR	ERV1	0	1755	1	1
166	chr1	96931253	96931254	chunk0008_378_1	20.60425	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	96931177	96931272	-152025150	-	MER67C	LTR	ERV1	-614	97	3	1
167	chr1	97356357	97356358	chunk0008_396_1	12.2728	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	97355253	97357501	-151598921	-	L1MA7	LINE	L1	0	6291	4125	1
168	chr1	99345711	99345712	chunk0008_428_1	5.03921	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	99345674	99345904	-149610518	-	MIRb	SINE	MIR	-17	251	11	1
169	chr1	88994182	88994183	chunk0008_44_1	5.07296	AR_DHT_Control	chr1	88993941	88994245	-159962177	-	MER90	LTR	ERV1	-269	306	1	1
170	chr1	99685711	99685712	chunk0008_449_1	6.22495	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	99685615	99685784	-149270638	+	MamRTE1	LINE	RTE-BovB	2159	2359	-1453	1
171	chr1	89489481	89489482	chunk0008_60_1	4.71246	AR_DHT_Control	chr1	89488618	89490445	-159465977	+	L1M1	LINE	L1	17	1846	-5719	1
172	chr1	89545490	89545491	chunk0008_61_1	6.84874	AR_DHT_Control	chr1	89545294	89545507	-159410915	-	MIRc	SINE	MIR	-28	240	2	1
173	chr1	102588675	102588676	chunk0009_107_1	14.1296	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	102588529	102588839	-146367583	-	MLT1B	LTR	ERVL-MaLR	0	390	100	1
174	chr1	102840297	102840298	chunk0009_118_1	20.36039	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	102837115	102840789	-146115633	+	HERVK3-int	LTR	ERVK	3495	7200	-2	1
175	chr1	103445939	103445940	chunk0009_127_1	26.1717	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	103445350	103446739	-145509683	+	L1PA11	LINE	L1	4777	6166	-8	1
176	chr1	104472673	104472674	chunk0009_133_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	104470861	104473858	-144482564	+	ERVL-B4-int	LTR	ERVL	2434	5468	-186	1
177	chr1	104807669	104807670	chunk0009_143_1	52.8255	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	104807576	104807988	-144148434	+	L1M4a2	LINE	L1	458	875	-1781	1
178	chr1	104947302	104947303	chunk0009_151_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	104947026	104947665	-144008757	+	THE1D-int	LTR	ERVL-MaLR	538	1200	-431	1
179	chr1	100006484	100006485	chunk0009_16_1	4.83532	AR_DHT_Control	chr1	100005056	100006760	-148949662	-	L1M2	LINE	L1	-4330	3236	1502	1
180	chr1	105396219	105396220	chunk0009_170_1	66.53463	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	105395304	105396364	-143560058	-	L1MA2	LINE	L1	-4619	2946	1784	1
181	chr1	105621610	105621611	chunk0009_178_1	14.07255	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	105620946	105623326	-143333096	-	L1M3c	LINE	L1	-3981	3584	1542	1
182	chr1	105695150	105695151	chunk0009_181_1	6.38514	AR_DHT_Control	chr1	105694712	105695415	-143261007	-	L1MEc	LINE	L1	-5420	980	231	1
183	chr1	105785304	105785305	chunk0009_186_1	6.48643	AR_DHT_Control	chr1	105784959	105785392	-143171030	+	MLT1D	LTR	ERVL-MaLR	1	423	-82	1
184	chr1	106044843	106044844	chunk0009_202_1	26.50203	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	106044649	106045354	-142911068	+	L1MC1	LINE	L1	5447	6128	-205	1
185	chr1	106644399	106644400	chunk0009_225_1	96.0241	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	106644340	106644546	-142311876	-	MIR	SINE	MIR	0	262	29	1
186	chr1	107790385	107790386	chunk0009_296_1	15.36106	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	107790320	107790592	-141165830	-	L2a	LINE	L2	-23	3403	3102	1
187	chr1	108571120	108571121	chunk0009_313_1	11.2868	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	108570354	108571624	-140384798	-	L2	LINE	L2	-1783	1636	190	1
188	chr1	108704815	108704816	chunk0009_320_1	45.1777	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	108704720	108704841	-140251581	-	MamRep1879	DNA	hAT-Tip100?	-37	179	56	1
189	chr1	108953614	108953615	chunk0009_327_1	7.74912	AR_DHT_Control	chr1	108953572	108953655	-140002767	+	L2b	LINE	L2	3287	3365	-10	1
190	chr1	111142822	111142823	chunk0009_430_1	17.504	AR_DHT_Control	chr1	111142671	111142867	-137813555	-	L2b	LINE	L2	-15	3372	3188	1
191	chr1	111156355	111156356	chunk0009_433_1	5.40815	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	111155837	111156476	-137799946	-	L1MA5	LINE	L1	-2974	3166	2585	1
192	chr1	111406449	111406450	chunk0009_443_1	53.7145	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	111406268	111406504	-137549918	+	LTR41	LTR	ERVL	9	247	-521	1
193	chr1	100570742	100570743	chunk0009_54_1	12.1095	AR_DHT_Control	chr1	100570172	100571289	-148385133	+	L1PREC2	LINE	L1	2827	3931	-2215	1
194	chr1	100603661	100603662	chunk0009_55_1	21.6566	AR_DHT_Control	chr1	100598238	100604384	-148352038	-	L1PA5	LINE	L1	0	6154	6	1
195	chr1	101156322	101156323	chunk0009_84_1	7.74912	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	101156305	101156442	-147799980	-	MLT1J2	LTR	ERVL-MaLR	-301	147	1	1
196	chr1	114457559	114457560	chunk0010_118_1	36.7567	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	114457297	114457827	-134498595	+	MER21-int	LTR	ERVL	1943	2462	-1729	1
197	chr1	114539223	114539224	chunk0010_129_1	16.11841	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	114539070	114539485	-134416937	-	HAL1	LINE	L1	-1744	763	288	1
198	chr1	112054739	112054740	chunk0010_13_1	55.3814	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	112054569	112055264	-136901158	+	L1MC4	LINE	L1	7392	8040	-2	1
199	chr1	115644536	115644537	chunk0010_167_1	7.38769	AR_DHT_Control	chr1	115644518	115644566	-133311856	+	(GTTTGAA)n	Simple_repeat	Simple_repeat	1	50	0	1
200	chr1	116556815	116556816	chunk0010_251_1	9.63374	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	116556784	116557001	-132399421	-	MER102a	DNA	hAT-Charlie	-56	275	72	1
201	chr1	117336666	117336667	chunk0010_277_1	7.09019	AR_DHT_Control	chr1	117335499	117336856	-131619566	+	MamGyp-int	LTR	Gypsy	397	1716	-3387	2
202	chr1	118069888	118069889	chunk0010_316_1	22.49905	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	118069358	118070014	-130886408	-	L2a	LINE	L2	-739	2680	1953	2
203	chr1	118321611	118321612	chunk0010_330_1	6.94032	AR_DHT_Control	chr1	118321526	118321783	-130634639	+	LTR37B	LTR	ERV1	193	468	0	2
204	chr1	119238545	119238546	chunk0010_379_1	4.73472	AR_DHT_Control	chr1	119238530	119238714	-129717708	+	MER5A	DNA	hAT-Charlie	4	189	0	2
205	chr1	119347274	119347275	chunk0010_385_1	4.73472	AR_DHT_Control	chr1	119346821	119347458	-129608964	-	MER4-int	LTR	ERV1	-4103	2495	1820	2
206	chr1	111822926	111822927	chunk0010_4_1	7.20445	AR_DHT_Control	chr1	111822878	111823030	-137133392	-	MIRb	SINE	MIR	-40	228	55	1
207	chr1	119675086	119675087	chunk0010_419_1	4.71246	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	119674919	119675108	-129281314	+	MER20	DNA	hAT-Charlie	41	219	0	2
208	chr1	119747134	119747135	chunk0010_423_1	5.47663	AR_DHT_Control	chr1	119747077	119747145	-129209277	-	MamRep38	DNA	hAT	-220	75	3	2
209	chr1	113027241	113027242	chunk0010_61_1	5.99997	AR_DHT_Control	chr1	113027162	113027362	-135929060	+	MIRb	SINE	MIR	9	222	-46	1
210	chr1	113420017	113420018	chunk0010_82_1	4.5547	AR_DHT_Control	chr1	113420016	113420273	-135536149	+	L3	LINE	CR1	3829	4096	-3	1
211	chr1	113488735	113488736	chunk0010_87_1	8.27376	AR_DHT_Control	chr1	113488204	113494515	-135461907	+	L1PA13	LINE	L1	334	6772	-11	1
212	chr1	113739783	113739784	chunk0010_92_1	19.87735	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	113739452	113740746	-135215676	-	L1MA5	LINE	L1	-3	6297	4959	1
213	chr1	146037123	146037124	chunk0011_113_1	6.45888	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	146037060	146037132	-102919290	+	tRNA-Gly-GGA	tRNA	tRNA	1	72	-3	2
214	chr1	147163263	147163264	chunk0011_130_1	14.2056	AR_DHT_Control	chr1	147163102	147163859	-101792563	+	L1MB7	LINE	L1	5407	6168	-16	2
215	chr1	147242375	147242376	chunk0011_139_1	29.24348	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	147242301	147242400	-101714022	+	L2b	LINE	L2	3271	3374	-1	2
216	chr1	147389043	147389044	chunk0011_144_1	5.16131	AR_DHT_Control	chr1	147388613	147390776	-101565646	+	L1P4d	LINE	L1	1	2210	-4725	2
217	chr1	147437275	147437276	chunk0011_145_1	13.2796	AR_DHT_Control	chr1	147436985	147437602	-101518820	-	LTR51	LTR	ERV1	0	671	1	2
218	chr1	147642255	147642256	chunk0011_164_1	17.38226	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	147642250	147642338	-101314084	-	L2b	LINE	L2	0	3375	3286	2
219	chr1	148263583	148263584	chunk0011_176_1	13.12022	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	148263476	148263632	-100692790	+	U1	snRNA	snRNA	2	164	-1	2
220	chr1	148334726	148334727	chunk0011_179_1	9.06829	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	148334611	148334766	-100621656	-	U1	snRNA	snRNA	-1	164	2	2
221	chr1	149919240	149919241	chunk0011_193_1	5.28878	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	149919021	149919567	-99036855	-	MamRep605	LTR?	LTR?	-50	799	204	2
222	chr1	125166671	125166672	chunk0011_2_1	24.1334	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	125164017	125167986	-123788436	+	(GATTC)n	Simple_repeat	Simple_repeat	5	4104	0	2
223	chr1	150207651	150207652	chunk0011_221_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	150207382	150207902	-98748520	+	MER89	LTR	ERV1	1	541	-18	2
224	chr1	150362977	150362978	chunk0011_227_1	7.34658	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	150362870	150363244	-98593178	+	L2a	LINE	L2	3034	3426	0	2
225	chr1	150937236	150937237	chunk0011_261_1	10.231	AR_DHT_Control	chr1	150937147	150937471	-98018951	+	L1MB2	LINE	L1	5776	6125	-46	2
226	chr1	151428197	151428198	chunk0011_283_1	5.66005	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	151428196	151428260	-97528162	+	G-rich	Low_complexity	Low_complexity	1	64	0	2
227	chr1	151563590	151563591	chunk0011_299_1	6.9031	AR_DHT_Control	chr1	151563325	151563647	-97392775	+	Tigger3a	DNA	TcMar-Tigger	14	348	0	2
228	chr1	151739958	151739959	chunk0011_304_1	6.18182	AR_DHT_Control	chr1	151739651	151740094	-97216328	+	LTR16	LTR	ERVL	1	438	0	2
229	chr1	152199053	152199054	chunk0011_341_1	9.45492	AR_DHT_Control	chr1	152198623	152199064	-96757358	-	L1ME3Cz	LINE	L1	-70	927	422	2
230	chr1	153049610	153049611	chunk0011_360_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	153048825	153051603	-95904819	+	L1PA11	LINE	L1	6	2758	-4027	2
231	chr1	153849101	153849102	chunk0011_383_1	45.227	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	153849032	153849150	-95107272	-	FLAM_A	SINE	Alu	-13	129	1	2
232	chr1	144103696	144103697	chunk0011_71_1	51.6783	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	144101292	144106919	-104849503	+	(TGGCTGGCT)n	Simple_repeat	Simple_repeat	1	5911	0	2
233	chr1	144104517	144104518	chunk0011_74_1	86.7242	Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	144101292	144106919	-104849503	+	(TGGCTGGCT)n	Simple_repeat	Simple_repeat	1	5911	0	2
234	chr1	156501052	156501053	chunk0012_101_1	5.48709	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	156501040	156501087	-92455335	+	G-rich	Low_complexity	Low_complexity	1	47	0	2
235	chr1	156559948	156559949	chunk0012_104_1	75.20028	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	156559874	156559981	-92396441	-	L2	LINE	L2	-570	2849	2730	2
236	chr1	157315641	157315642	chunk0012_141_1	5.73594	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	157315264	157319281	-91637141	+	L1PA6	LINE	L1	5	3983	-2163	2
237	chr1	157683371	157683372	chunk0012_146_1	4.9245	AR_DHT_Control	chr1	157683342	157683455	-91272967	-	MIR3	SINE	MIR	-21	187	84	2
238	chr1	157910939	157910940	chunk0012_152_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	157909694	157911341	-91045081	+	MSTB2-int	LTR	ERVL-MaLR	1	1650	-1	2
239	chr1	158201430	158201431	chunk0012_165_1	62.4151	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	158201119	158203041	-90753381	+	L1MEf	LINE	L1	2387	4236	-1910	2
240	chr1	158507120	158507121	chunk0012_168_1	4.56426	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	158505036	158507710	-90448712	-	L1M1	LINE	L1	-4080	3485	22	2
241	chr1	159868183	159868184	chunk0012_196_1	4.98725	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	159868172	159868466	-89087956	+	L3	LINE	CR1	3776	4094	-5	2
242	chr1	160194249	160194250	chunk0012_220_1	5.51891	AR_DHT_Control	chr1	160193931	160194901	-88761521	+	(CA)n	Simple_repeat	Simple_repeat	1	1021	0	2
243	chr1	160315558	160315559	chunk0012_228_1	24.76814	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	160314961	160315619	-88640803	+	L1MA4	LINE	L1	1241	1940	-4625	2
244	chr1	160320165	160320166	chunk0012_229_1	7.20445	AR_DHT_Control	chr1	160318497	160320327	-88636095	+	L1MA4	LINE	L1	3007	4853	-2709	2
245	chr1	161703240	161703241	chunk0012_262_1	5.58563	AR_DHT_Control	chr1	161703136	161703806	-87252616	+	L1ME1	LINE	L1	5567	6178	-1	2
246	chr1	154714261	154714262	chunk0012_3_1	7.82433	AR_DHT_Control	chr1	154713960	154714648	-94241774	+	(GT)n	Simple_repeat	Simple_repeat	1	744	0	2
247	chr1	162475737	162475738	chunk0012_326_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	162475109	162476295	-86480127	+	L1MA3	LINE	L1	303	2177	-5388	2
248	chr1	162678568	162678569	chunk0012_348_1	7.34658	AR_DHT_Control	chr1	162678492	162678573	-86277849	-	MIR3	SINE	MIR	-15	193	112	2
249	chr1	162930728	162930729	chunk0012_367_1	62.59537	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	162930684	162930800	-86025622	-	MIR3	SINE	MIR	-46	162	48	2
250	chr1	163537997	163537998	chunk0012_385_1	7.40938	AR_DHT_Control	chr1	163537984	163538180	-85418242	+	MIR	SINE	MIR	22	219	-11	2
251	chr1	163917250	163917251	chunk0012_402_1	9.69227	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	163917092	163917624	-85038798	-	L1M2c	LINE	L1	-6206	1360	464	2
252	chr1	164061504	164061505	chunk0012_406_1	7.42871	AR_DHT_Control	chr1	164060953	164061960	-84894462	+	L1PA13	LINE	L1	14	970	-5815	2
253	chr1	164075749	164075750	chunk0012_407_1	21.26869	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	164075257	164077779	-84878643	-	L1MC4	LINE	L1	-873	5341	2721	2
254	chr1	164166594	164166595	chunk0012_412_1	48.5358	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	164166560	164172086	-84784336	+	L1PA6	LINE	L1	616	6153	-1	2
255	chr1	164465932	164465933	chunk0012_416_1	7.36432	AR_DHT_Control	chr1	164465892	164466334	-84490088	-	ERV3-16A3_I-int	LTR	ERVL	-144	5082	4625	2
256	chr1	165001255	165001256	chunk0012_440_1	22.53094	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	165001108	165001585	-83954837	-	L2b	LINE	L2	-3	3423	2931	2
257	chr1	155522089	155522090	chunk0012_59_1	37.2298	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	155522038	155522139	-93434283	+	L1MA3	LINE	L1	6197	6300	-5	2
258	chr1	156301916	156301917	chunk0012_94_1	7.53305	AR_DHT_Control	chr1	156301545	156302024	-92654398	+	LTR27C	LTR	ERV1	255	766	-1	2
259	chr1	156302959	156302960	chunk0012_95_1	5.73469	AR_DHT_Control	chr1	156302818	156302985	-92653437	-	L1ME4b	LINE	L1	-255	637	436	2
260	chr1	167793924	167793925	chunk0013_103_1	15.1066	AR_DHT_Control	chr1	167793816	167794017	-81162405	+	L4_A_Mam	LINE	RTE-X	4673	4871	-119	2
261	chr1	167932919	167932920	chunk0013_117_1	14.7139	AR_DHT_Control	chr1	167932837	167933040	-81023382	-	L4_A_Mam	LINE	RTE-X	-663	4327	4127	2
262	chr1	167959513	167959514	chunk0013_122_1	17.1928	AR_DHT_Control	chr1	167958724	167960293	-80996129	-	L1MC1	LINE	L1	-17	6491	4926	2
263	chr1	168027093	168027094	chunk0013_124_1	7.80475	AR_DHT_Control	chr1	168026342	168027221	-80929201	-	L2	LINE	L2	-567	2852	1909	2
264	chr1	168926480	168926481	chunk0013_179_1	9.07871	AR_DHT_Control	chr1	168926375	168926755	-80029667	+	MER119	DNA	hAT-Charlie	31	422	-161	2
265	chr1	169059373	169059374	chunk0013_184_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	169059362	169059387	-79897035	+	(T)n	Simple_repeat	Simple_repeat	1	25	0	2
266	chr1	169161352	169161353	chunk0013_191_1	20.0638	AR_DHT_Control	chr1	169161319	169161417	-79795005	+	MamRep564	Unknown	Unknown	194	288	-69	2
267	chr1	169383612	169383613	chunk0013_204_1	11.4842	AR_DHT_Control	chr1	169383154	169383737	-79572685	+	L2a	LINE	L2	1471	2192	-1227	2
268	chr1	170531951	170531952	chunk0013_277_1	6.22495	AR_DHT_Control	chr1	170531951	170531984	-78424438	+	GA-rich	Low_complexity	Low_complexity	1	33	0	2
269	chr1	171017785	171017786	chunk0013_288_1	7.57442	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	171017138	171018900	-77937522	+	L1PA8	LINE	L1	3	1796	-4687	2
270	chr1	171119432	171119433	chunk0013_291_1	5.20246	AR_DHT_Control	chr1	171119369	171119466	-77836956	-	MER20B	DNA	hAT-Charlie	0	783	689	2
271	chr1	171353695	171353696	chunk0013_313_1	73.1717	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	171353333	171353761	-77602661	+	L2a	LINE	L2	2817	3352	-74	2
272	chr1	171555883	171555884	chunk0013_325_1	30.7462	AR_DHT_Control	chr1	171550468	171556557	-77399865	-	L1PA6	LINE	L1	0	6154	5	2
273	chr1	171641079	171641080	chunk0013_329_1	4.15945	AR_DHT_Control	chr1	171640855	171641230	-77315192	+	L1MC1	LINE	L1	5939	6332	-1	2
274	chr1	172261635	172261636	chunk0013_354_1	5.20246	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	172261112	172262754	-76693668	-	L1MA4A	LINE	L1	-5104	2462	718	2
275	chr1	172356809	172356810	chunk0013_359_1	58.7892	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	172356789	172357809	-76598613	+	L1MC4a	LINE	L1	6758	7873	-9	2
276	chr1	172680945	172680946	chunk0013_386_1	4.81216	AR_DHT_Control	chr1	172680830	172681027	-76275395	+	LTR33A_	LTR	ERVL	143	351	-180	2
277	chr1	172727715	172727716	chunk0013_387_1	4.36616	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	172726723	172728737	-76227685	+	L1PA15-16	LINE	L1	4	1950	-4985	2
278	chr1	172847967	172847968	chunk0013_392_1	6.33484	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	172847552	172849787	-76106635	-	LTR19-int	LTR	ERV1	-1121	4465	1738	2
279	chr1	172905637	172905638	chunk0013_397_1	4.84918	AR_DHT_Control	chr1	172905443	172905822	-76050600	-	LTR16A2	LTR	ERVL	-89	406	3	2
280	chr1	173079423	173079424	chunk0013_409_1	6.88185	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	173079108	173079611	-75876811	+	L1PA15	LINE	L1	339	822	-5963	2
281	chr1	173258057	173258058	chunk0013_417_1	5.98896	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	173257352	173258102	-75698320	-	MER77B	LTR	ERVL	-115	823	39	2
282	chr1	173288137	173288138	chunk0013_418_1	13.35637	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	173288057	173288162	-75668260	+	L1ME1	LINE	L1	2467	2572	-3574	2
283	chr1	173300832	173300833	chunk0013_420_1	8.40061	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	173300798	173300946	-75655476	+	MIRb	SINE	MIR	26	194	-74	2
284	chr1	173452053	173452054	chunk0013_428_1	47.2222	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	173451879	173452056	-75504366	+	ERVL-E-int	LTR	ERVL	647	816	-4851	2
285	chr1	167594980	167594981	chunk0013_76_1	25.5243	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	167594883	167595285	-81361137	-	MER57B1	LTR	ERV1	0	401	2	2
286	chr1	167671992	167671993	chunk0013_86_1	66.48892	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	167671930	167672308	-81284114	+	L2a	LINE	L2	2961	3412	-14	2
287	chr1	176911830	176911831	chunk0014_113_1	11.2223	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	176911033	176912059	-72044363	-	Tigger3b	DNA	TcMar-Tigger	-135	1096	4	2
288	chr1	178126112	178126113	chunk0014_148_1	5.08049	AR_DHT_Control	chr1	178125987	178126209	-70830213	-	MIR	SINE	MIR	-1	261	19	2
289	chr1	178163637	178163638	chunk0014_153_1	17.25246	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	178163260	178164020	-70792402	-	L1MB7	LINE	L1	-942	5204	4387	2
290	chr1	178304662	178304663	chunk0014_165_1	7.74912	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	178304543	178304699	-70651723	-	L2	LINE	L2	-1386	2033	1878	2
291	chr1	178572054	178572055	chunk0014_178_1	6.58746	AR_DHT_Control	chr1	178571799	178572122	-70384300	-	L1M4	LINE	L1	-6449	1068	727	2
292	chr1	179330055	179330056	chunk0014_214_1	7.77075	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	179330001	179330737	-69625685	-	LTR8B	LTR	ERV1	0	820	1	2
293	chr1	179954778	179954779	chunk0014_241_1	6.13915	AR_DHT_Control	chr1	179954760	179954795	-69001627	+	(CGCAGC)n	Simple_repeat	Simple_repeat	1	36	0	2
294	chr1	180073975	180073976	chunk0014_250_1	102.8165	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	180073953	180074004	-68882418	+	(TT)n	Simple_repeat	Simple_repeat	1	51	0	2
295	chr1	180126903	180126904	chunk0014_256_1	18.57009	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	180126769	180126986	-68829436	-	MIR	SINE	MIR	-1	261	32	2
296	chr1	180311979	180311980	chunk0014_270_1	36.6936	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	180311967	180312744	-68643678	-	L1ME3A	LINE	L1	-1378	4768	3943	2
297	chr1	180666280	180666281	chunk0014_292_1	6.35715	AR_DHT_Control	chr1	180665963	180666918	-68289504	-	L1M4c	LINE	L1	-1151	5487	4549	2
298	chr1	180987162	180987163	chunk0014_300_1	6.26417	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	180986956	180987545	-67968877	+	L2a	LINE	L2	2727	3426	0	2
299	chr1	182029480	182029481	chunk0014_327_1	10.0039	AR_DHT_Control	chr1	182028925	182029560	-66926862	+	L2b	LINE	L2	2539	3298	-77	2
300	chr1	182066612	182066613	chunk0014_329_1	6.9063	AR_DHT_Control	chr1	182066598	182066827	-66889595	+	MIRb	SINE	MIR	27	268	0	2
301	chr1	182484959	182484960	chunk0014_364_1	5.40372	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	182483731	182485450	-66470972	-	L1M2a	LINE	L1	-5651	1517	3	2
302	chr1	182578275	182578276	chunk0014_366_1	6.6351	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	182577522	182578500	-66377922	+	L1PB4	LINE	L1	4531	5520	-636	2
303	chr1	182579119	182579120	chunk0014_367_1	10.08909	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	182578753	182579224	-66377198	+	L1PB4	LINE	L1	5659	6144	-12	2
304	chr1	182743857	182743858	chunk0014_386_1	13.01709	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	182743788	182743883	-66212539	+	(AC)n	Simple_repeat	Simple_repeat	1	98	0	2
305	chr1	182893565	182893566	chunk0014_398_1	7.47918	AR_DHT_Control	chr1	182893525	182893773	-66062649	-	MER50	LTR	ERV1	-500	234	1	2
306	chr1	182911535	182911536	chunk0014_399_1	10.3593	AR_DHT_Control	chr1	182911189	182911930	-66044492	+	L1MB5	LINE	L1	835	1580	-5937	2
307	chr1	183789809	183789810	chunk0014_443_1	8.35541	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	183789690	183789826	-65166596	-	MLT1J	LTR	ERVL-MaLR	0	512	374	2
308	chr1	176567572	176567573	chunk0014_88_1	111.38045	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	176567539	176567792	-72388630	-	L2c	LINE	L2	0	3387	3139	2
309	chr1	176595746	176595747	chunk0014_93_1	6.79294	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	176595702	176595941	-72360481	-	L2b	LINE	L2	0	3375	3135	2
310	chr1	176717316	176717317	chunk0014_99_1	4.88663	AR_DHT_Control	chr1	176717152	176717678	-72238744	+	MER66C	LTR	ERV1	1	541	-14	2
311	chr1	185164498	185164499	chunk0015_108_1	15.248	AR_DHT_Control	chr1	185163693	185165443	-63790979	-	Tigger1	DNA	TcMar-Tigger	-625	1793	4	2
312	chr1	185317270	185317271	chunk0015_116_1	4.31195	AR_DHT_Control	chr1	185317243	185317318	-63639104	+	(GCC)n	Simple_repeat	Simple_repeat	1	76	0	2
313	chr1	184180542	184180543	chunk0015_12_1	9.45492	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	184180394	184180548	-64775874	+	MER2	DNA	TcMar-Tigger	207	345	0	2
314	chr1	185358883	185358884	chunk0015_121_1	12.32763	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	185358277	185359739	-63596683	+	L1P4a	LINE	L1	41	1605	-4898	2
315	chr1	186082404	186082405	chunk0015_143_1	8.62865	AR_DHT_Control	chr1	186082217	186082650	-62873772	-	MLT1H	LTR	ERVL-MaLR	-13	476	1	2
316	chr1	186566550	186566551	chunk0015_163_1	61.4816	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	186566488	186566746	-62389676	+	L2c	LINE	L2	3087	3387	0	2
317	chr1	187172430	187172431	chunk0015_181_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	187171448	187172769	-61783653	-	L1PB4	LINE	L1	-5656	1197	1	2
318	chr1	188397300	188397301	chunk0015_269_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	188396563	188397740	-60558682	+	L1MA5	LINE	L1	400	1543	-6023	2
319	chr1	188458847	188458848	chunk0015_273_1	7.42871	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	188458772	188458973	-60497449	-	MER45R	DNA	hAT-Tip100	-1381	200	2	2
320	chr1	188639252	188639253	chunk0015_284_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	188639063	188639524	-60316898	-	L1MDa	LINE	L1	-5929	611	135	2
321	chr1	188770207	188770208	chunk0015_292_1	20.65621	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	188770099	188774996	-60181426	+	L1PA10	LINE	L1	1746	6646	-49	2
322	chr1	188822076	188822077	chunk0015_296_1	11.8854	AR_DHT_Control	chr1	188822074	188822111	-60134311	+	(GA)n	Simple_repeat	Simple_repeat	1	37	0	2
323	chr1	188856010	188856011	chunk0015_297_1	9.13774	AR_DHT_Control	chr1	188855679	188856395	-60100027	-	L1ME2	LINE	L1	-70	6094	5273	2
324	chr1	188874519	188874520	chunk0015_300_1	7.63982	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	188874224	188874955	-60081467	-	LTR1B0	LTR	ERV1	0	742	1	2
325	chr1	188964961	188964962	chunk0015_305_1	5.48709	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	188964711	188965001	-59991421	-	MLT1A	LTR	ERVL-MaLR	0	374	88	2
326	chr1	189130120	189130121	chunk0015_308_1	25.7984	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	189129933	189130716	-59825706	+	L1MB8	LINE	L1	5385	6176	-2	2
327	chr1	189132849	189132850	chunk0015_310_1	6.05516	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	189132840	189132934	-59823488	-	MamRTE1	LINE	RTE-BovB	-720	3092	3004	2
328	chr1	189246011	189246012	chunk0015_315_1	75.8128	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	189245905	189246453	-59709969	+	L2a	LINE	L2	2807	3426	0	2
329	chr1	189372041	189372042	chunk0015_320_1	5.86499	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	189371988	189372868	-59583554	-	L1ME1	LINE	L1	-10	6169	5197	2
330	chr1	189616073	189616074	chunk0015_328_1	41.0942	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	189615554	189616838	-59339584	+	L1MEd	LINE	L1	3307	4701	-1445	2
331	chr1	189708737	189708738	chunk0015_330_1	7.52656	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	189708211	189710067	-59246355	+	L1PA15	LINE	L1	496	2333	-4452	2
332	chr1	190190266	190190267	chunk0015_352_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	190189993	190190545	-58765877	-	L1M3e	LINE	L1	-6491	998	466	2
333	chr1	190367115	190367116	chunk0015_359_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	190366501	190368074	-58588348	-	THE1C-int	LTR	ERVL-MaLR	0	1631	5	2
334	chr1	190683022	190683023	chunk0015_388_1	29.94486	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	190682884	190683106	-58273316	-	L1MCb	LINE	L1	-936	5628	5408	2
335	chr1	190886967	190886968	chunk0015_396_1	43.00853	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	190886486	190887234	-58069188	+	MLT1J2-int	LTR	ERVL-MaLR	357	1231	-156	2
336	chr1	191112037	191112038	chunk0015_405_1	9.94664	AR_DHT_Control	chr1	191111824	191112070	-57844352	-	L1M7	LINE	L1	-4693	1525	1264	2
337	chr1	191175138	191175139	chunk0015_411_1	8.76676	AR_DHT_Control	chr1	191174033	191176756	-57779666	-	Tigger2	DNA	TcMar-Tigger	0	2718	2	2
338	chr1	191302736	191302737	chunk0015_413_1	6.62034	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	191300721	191303747	-57652675	-	L1PA16	LINE	L1	-3399	3084	5	2
339	chr1	191481130	191481131	chunk0015_418_1	13.9477	AR_DHT_Control	chr1	191480692	191481211	-57475211	+	LTR38	LTR	ERV1	30	556	0	2
340	chr1	191533381	191533382	chunk0015_422_1	8.52187	AR_DHT_Control	chr1	191533027	191534866	-57421556	+	L1M2	LINE	L1	1	2936	-4171	2
341	chr1	191607961	191607962	chunk0015_430_1	10.5201	AR_DHT_Control	chr1	191607906	191608207	-57348215	-	MER50B	LTR	ERV1	0	697	407	2
342	chr1	191609030	191609031	chunk0015_431_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	191608966	191609131	-57347291	+	HERVL18-int	LTR	ERVL	2	165	-5882	2
343	chr1	184743671	184743672	chunk0015_69_1	27.30555	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	184743631	184744247	-64212175	+	L1ME1	LINE	L1	4685	5310	-836	2
344	chr1	185073075	185073076	chunk0015_99_1	17.34177	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	185073008	185073285	-63883137	-	L1ME3G	LINE	L1	-2068	5814	5637	2
345	chr1	195894505	195894506	chunk0016_107_1	13.54415	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	195894266	195894742	-53061680	-	MER70A	LTR	ERVL	0	472	1	2
346	chr1	195979852	195979853	chunk0016_108_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	195979831	195980325	-52976097	-	LTR55	LTR	ERVL?	-17	531	1	2
347	chr1	196896489	196896490	chunk0016_122_1	7.17788	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	196896119	196896837	-52059585	-	L1M4c	LINE	L1	-5579	805	19	2
348	chr1	197027776	197027777	chunk0016_133_1	4.19326	AR_DHT_Control	chr1	197027723	197028287	-51928135	-	L1MA9	LINE	L1	0	6312	5766	2
349	chr1	197212101	197212102	chunk0016_139_1	16.36286	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	197211762	197212776	-51743646	+	L1ME1	LINE	L1	5117	6178	-1	2
350	chr1	198091654	198091655	chunk0016_180_1	6.37684	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	198091643	198091760	-50864662	-	LTR16B	LTR	ERVL	-5	458	343	2
351	chr1	192668375	192668376	chunk0016_2_1	5.46037	AR_DHT_Control	chr1	192662965	192669094	-56287328	-	L1PA6	LINE	L1	-3	6151	5	2
352	chr1	199045773	199045774	chunk0016_217_1	5.44741	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	199045694	199051921	-49904501	+	L1PA16	LINE	L1	3	6473	-18	2
353	chr1	199046605	199046606	chunk0016_218_1	6.71486	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	199045694	199051921	-49904501	+	L1PA16	LINE	L1	3	6473	-18	2
354	chr1	199462643	199462644	chunk0016_224_1	4.86605	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	199462374	199462805	-49493617	+	L1M1	LINE	L1	1532	1954	-5532	2
355	chr1	199488680	199488681	chunk0016_225_1	15.3685	AR_DHT_Control	chr1	199488490	199488698	-49467724	-	L3	LINE	CR1	-835	3264	3044	2
356	chr1	199947942	199947943	chunk0016_244_1	4.96282	AR_DHT_Control	chr1	199947818	199948119	-49008303	-	L1PA12	LINE	L1	-11	6157	5861	2
357	chr1	201245204	201245205	chunk0016_297_1	5.73469	AR_DHT_Control	chr1	201245005	201245396	-47711026	+	MLT1A	LTR	ERVL-MaLR	1	370	-4	2
358	chr1	201266645	201266646	chunk0016_299_1	66.6655	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	201266451	201266925	-47689497	-	HAL1b	LINE	L1	-1253	1168	640	2
359	chr1	201461218	201461219	chunk0016_310_1	17.35869	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	201461174	201461416	-47495006	-	L2c	LINE	L2	-20	3367	3118	2
360	chr1	202064739	202064740	chunk0016_353_1	12.1937	AR_DHT_Control	chr1	202064497	202064795	-46891627	+	L1MB7	LINE	L1	5371	5674	-510	2
361	chr1	193122122	193122123	chunk0016_40_1	10.0039	AR_DHT_Control	chr1	193122095	193122150	-55834272	+	GA-rich	Low_complexity	Low_complexity	1	55	0	2
362	chr1	203257207	203257208	chunk0016_403_1	8.27376	AR_DHT_Control	chr1	203256484	203257899	-45698523	+	L1P2	LINE	L1	2	1420	-4764	2
363	chr1	193145349	193145350	chunk0016_41_1	23.33932	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	193144444	193145718	-55810704	+	Charlie1	DNA	hAT-Charlie	1442	2760	-21	2
364	chr1	193261501	193261502	chunk0016_50_1	9.31879	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	193261479	193261666	-55694756	-	Charlie7	DNA	hAT-Charlie	-2044	568	375	2
365	chr1	193597970	193597971	chunk0016_68_1	6.75651	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	193597959	193598197	-55358225	-	Charlie2b	DNA	hAT-Charlie	-1	2781	2568	2
366	chr1	193855135	193855136	chunk0016_77_1	11.9014	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	193855012	193855365	-55101057	-	Tigger3a	DNA	TcMar-Tigger	0	348	2	2
367	chr1	192707453	192707454	chunk0016_8_1	4.81216	AR_DHT_Control	chr1	192707398	192707501	-56248921	+	MLT1B	LTR	ERVL-MaLR	1	87	-303	2
368	chr1	194231062	194231063	chunk0016_82_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	194229952	194231072	-54725350	-	MER52C	LTR	ERV1	0	1278	1	2
369	chr1	194437116	194437117	chunk0016_87_1	7.63982	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	194436770	194438003	-54518419	+	L1PA13	LINE	L1	2	1487	-5299	2
370	chr1	195218644	195218645	chunk0016_97_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	195218186	195219154	-53737268	+	LTR2752	LTR	ERV1	233	1263	0	2
371	chr1	195237662	195237663	chunk0016_98_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	195237234	195238745	-53717677	+	MER52A	LTR	ERV1	1	1755	0	2
372	chr1	206526281	206526282	chunk0017_129_1	6.77976	AR_DHT_Control	chr1	206526269	206526293	-42430129	+	(GT)n	Simple_repeat	Simple_repeat	1	24	0	3
373	chr1	206916268	206916269	chunk0017_155_1	4.88212	AR_DHT_Control	chr1	206916181	206916730	-42039692	+	L3	LINE	CR1	1380	1998	-2101	3
374	chr1	206999163	206999164	chunk0017_159_1	71.3343	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	206998980	206999316	-41957106	-	Tigger3a	DNA	TcMar-Tigger	0	348	3	3
375	chr1	207628975	207628976	chunk0017_200_1	11.5972	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	207628929	207629199	-41327223	-	CR1_Mam	LINE	CR1	-587	1617	1338	3
376	chr1	207938286	207938287	chunk0017_216_1	9.07871	AR_DHT_Control	chr1	207938136	207938469	-41017953	-	MER57C2	LTR	ERV1	-44	390	1	3
377	chr1	208051768	208051769	chunk0017_231_1	12.86165	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	208051734	208051839	-40904583	-	L2c	LINE	L2	-2	3385	3258	3
378	chr1	208497038	208497039	chunk0017_245_1	6.79294	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	208492081	208497792	-40458630	-	L1PA16	LINE	L1	-1149	5700	2	3
379	chr1	208499719	208499720	chunk0017_246_1	14.33706	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	208499500	208499884	-40456538	-	MER97b	DNA	hAT-Tip100	-276	773	375	3
380	chr1	208515611	208515612	chunk0017_249_1	13.35622	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	208515133	208515697	-40440725	-	MER41B	LTR	ERV1	-11	543	1	3
381	chr1	209856585	209856586	chunk0017_283_1	6.69935	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	209856207	209856624	-39099798	+	MLT1J	LTR	ERVL-MaLR	4	460	-52	3
382	chr1	209900357	209900358	chunk0017_284_1	6.9031	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	209900042	209900645	-39055777	+	LTR50	LTR	ERVL	9	706	-89	3
383	chr1	211146090	211146091	chunk0017_301_1	6.86162	AR_DHT_Control	chr1	211145938	211146284	-37810138	+	L2	LINE	L2	1078	1455	-1964	3
384	chr1	211187398	211187399	chunk0017_306_1	4.26208	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	211187315	211188203	-37768219	-	L1MC4	LINE	L1	-385	7657	6535	3
385	chr1	211703792	211703793	chunk0017_341_1	6.39136	AR_DHT_Control	chr1	211703337	211703813	-37252609	+	MLT1C	LTR	ERVL-MaLR	1	467	0	3
386	chr1	211742568	211742569	chunk0017_345_1	5.69226	AR_DHT_Control	chr1	211742398	211742740	-37213682	-	Charlie2a	DNA	hAT-Charlie	-2353	508	104	3
387	chr1	211947993	211947994	chunk0017_363_1	7.87199	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	211947569	211948060	-37008362	-	LTR22B	LTR	ERVK	0	492	1	3
388	chr1	212088683	212088684	chunk0017_373_1	10.0431	AR_DHT_Control	chr1	212088342	212088780	-36867642	-	L2c	LINE	L2	-8	3379	2917	3
389	chr1	212133463	212133464	chunk0017_377_1	230.8828	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	212132860	212133701	-36822721	+	L1MD2	LINE	L1	5049	5919	-440	3
390	chr1	212566113	212566114	chunk0017_399_1	7.02986	AR_DHT_Control	chr1	212566106	212566235	-36390187	+	MIRc	SINE	MIR	17	144	-124	3
391	chr1	213070693	213070694	chunk0017_416_1	27.6681	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	213070430	213070829	-35885593	-	MER57B1	LTR	ERV1	0	401	1	3
392	chr1	213196689	213196690	chunk0017_427_1	10.4825	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	213195847	213196833	-35759589	-	L1PB1	LINE	L1	-359	6508	5516	3
393	chr1	213518653	213518654	chunk0017_432_1	24.4073	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	213518635	213518801	-35437621	-	Helitron1Nb_Mam	RC	Helitron	-946	170	1	3
394	chr1	214460668	214460669	chunk0017_456_1	9.34168	AR_DHT_Control	chr1	214460645	214460725	-34495697	+	L2b	LINE	L2	2984	3065	-322	3
395	chr1	214584209	214584210	chunk0017_466_1	91.1219	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	214583632	214584474	-34371948	+	Tigger2b_Pri	DNA	TcMar-Tigger	1	850	-218	3
396	chr1	205610811	205610812	chunk0017_70_1	15.50103	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	205610768	205610832	-43345590	+	(AC)n	Simple_repeat	Simple_repeat	1	64	0	3
397	chr1	215365304	215365305	chunk0018_18_1	7.91804	AR_DHT_Control	chr1	215362981	215366038	-33590384	-	L1P2	LINE	L1	-3053	3093	35	3
398	chr1	219371770	219371771	chunk0018_205_1	5.08478	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	219371512	219371907	-29584515	+	MER57B2	LTR	ERV1	1	403	0	3
399	chr1	219531935	219531936	chunk0018_217_1	14.791	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	219531867	219532306	-29424116	+	Tigger2a	DNA	TcMar-Tigger	1	433	-1	3
400	chr1	220238911	220238912	chunk0018_255_1	9.79599	AR_DHT_Control	chr1	220238612	220239005	-28717417	+	L2c	LINE	L2	3000	3383	-4	3
401	chr1	220474930	220474931	chunk0018_268_1	6.7814	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	220474850	220476259	-28480163	-	LTR12C	LTR	ERV1	0	1579	3	3
402	chr1	215612625	215612626	chunk0018_33_1	13.28851	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	215612599	215612821	-33343601	+	MIRb	SINE	MIR	25	260	-8	3
403	chr1	221929214	221929215	chunk0018_368_1	7.0729	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	221927607	221931877	-27024545	+	L1MA3	LINE	L1	11	4343	-3222	3
404	chr1	221941419	221941420	chunk0018_369_1	8.10772	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	221941333	221941864	-27014558	-	MER31-int	LTR	ERV1	-383	5804	5266	3
405	chr1	222615654	222615655	chunk0018_400_1	15.35921	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	222615172	222615888	-26340534	-	L2a	LINE	L2	-5	3421	2647	3
406	chr1	216261818	216261819	chunk0018_47_1	6.18774	AR_DHT_Control	chr1	216261663	216262805	-32693617	+	L1MA5	LINE	L1	1138	2272	-4517	3
407	chr1	216399669	216399670	chunk0018_50_1	9.50609	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	216399585	216402398	-32554024	+	L1MDa	LINE	L1	640	3344	-3193	3
408	chr1	217152389	217152390	chunk0018_74_1	7.14391	AR_DHT_Control	chr1	217152330	217152547	-31803875	+	MamSINE1	SINE	tRNA-RTE	6	256	-34	3
409	chr1	217639449	217639450	chunk0018_95_1	11.7718	AR_DHT_Control	chr1	217638629	217639521	-31316901	+	L1MEj	LINE	L1	531	1466	-694	3
410	chr1	224935699	224935700	chunk0019_104_1	8.21408	AR_DHT_Control	chr1	224933915	224939048	-24017374	+	L1MA4	LINE	L1	2179	7431	-288	3
411	chr1	225138362	225138363	chunk0019_112_1	8.41215	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	225137647	225138967	-23817455	-	L1PA11	LINE	L1	-5211	2370	1	3
412	chr1	225657678	225657679	chunk0019_134_1	86.2791	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	225657674	225657835	-23298587	-	MER130	DNA	DNA	-1241	353	169	3
413	chr1	223419988	223419989	chunk0019_14_1	39.59762	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	223419837	223420066	-25536356	-	MIRb	SINE	MIR	-8	260	13	3
414	chr1	226135085	226135086	chunk0019_170_1	5.53391	AR_DHT_Control	chr1	226134516	226135223	-22821199	+	L2b	LINE	L2	2590	3371	-4	3
415	chr1	226534671	226534672	chunk0019_181_1	7.44578	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	226534589	226534989	-22421433	+	MLT1K	LTR	ERVL-MaLR	3	429	-166	3
416	chr1	223623377	223623378	chunk0019_20_1	4.89968	AR_DHT_Control	chr1	223623257	223623514	-25332908	-	MIRb	SINE	MIR	-8	260	4	3
417	chr1	227306482	227306483	chunk0019_224_1	7.77075	AR_DHT_Control	chr1	227306237	227306688	-21649734	+	MamRTE1	LINE	RTE-BovB	3262	3751	-61	3
418	chr1	227605547	227605548	chunk0019_249_1	7.2534	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	227605192	227606015	-21350407	-	L1MB7	LINE	L1	-1741	4405	3594	3
419	chr1	228526974	228526975	chunk0019_276_1	6.49378	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	228526838	228527171	-20429251	+	L1MB4	LINE	L1	118	475	-6132	3
420	chr1	229191451	229191452	chunk0019_325_1	5.29288	AR_DHT_Control	chr1	229190849	229191640	-19764782	+	L1ME5	LINE	L1	5209	5978	-216	3
421	chr1	229426039	229426040	chunk0019_346_1	4.66817	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	229425993	229426256	-19530166	+	MLT1C	LTR	ERVL-MaLR	199	555	0	3
422	chr1	229485494	229485495	chunk0019_347_1	26.978	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	229485447	229485582	-19470840	+	HAL1	LINE	L1	2012	2148	-359	3
423	chr1	229715192	229715193	chunk0019_361_1	4.81216	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	229715068	229715562	-19240860	+	MER66C	LTR	ERV1	1	541	-14	3
424	chr1	224012708	224012709	chunk0019_37_1	14.13788	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	224011690	224016553	-24939869	+	(AATGG)n	Simple_repeat	Simple_repeat	1	4914	0	3
425	chr1	229905316	229905317	chunk0019_376_1	7.69373	AR_DHT_Control	chr1	229904168	229905656	-19050766	+	L1ME1	LINE	L1	5378	6974	0	3
426	chr1	224013934	224013935	chunk0019_39_1	9.95159	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	224011690	224016553	-24939869	+	(AATGG)n	Simple_repeat	Simple_repeat	1	4914	0	3
427	chr1	224014898	224014899	chunk0019_40_1	23.62083	Merged_Lncap_AR_Veh;AR_DHT_Control	chr1	224011690	224016553	-24939869	+	(AATGG)n	Simple_repeat	Simple_repeat	1	4914	0	3
428	chr1	230758280	230758281	chunk0019_418_1	11.6937	AR_DHT_Control	chr1	230758257	230758382	-18198040	+	L2b	LINE	L2	3247	3373	-2	3
429	chr1	224107046	224107047	chunk0019_45_1	6.54004	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	224106413	224107053	-24849369	-	LTR41	LTR	ERVL	-70	698	1	3
430	chr1	224113463	224113464	chunk0019_46_1	5.60881	AR_DHT_Control	chr1	224113385	224113726	-24842696	-	L1MB7	LINE	L1	-17	6167	5812	3
431	chr1	224543372	224543373	chunk0019_90_1	8.58456	AR_DHT_Control	chr1	224542842	224543606	-24412816	+	MER21C	LTR	ERVL	3	821	-117	3
432	chr1	233052634	233052635	chunk0020_108_1	4.86605	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	233052632	233052759	-15903663	+	L2a	LINE	L2	3261	3424	-2	3
433	chr1	233497977	233497978	chunk0020_125_1	9.89478	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	233497718	233498384	-15458038	-	LTR35B	LTR	ERV1	0	605	1	3
434	chr1	233520799	233520800	chunk0020_126_1	7.97093	AR_DHT_Control	chr1	233520603	233521196	-15435226	+	MLT2B3	LTR	ERVL	1	554	0	3
435	chr1	233602357	233602358	chunk0020_130_1	7.48106	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	233602276	233602387	-15354035	-	L2a	LINE	L2	0	3426	3312	3
436	chr1	233623482	233623483	chunk0020_133_1	7.64898	AR_DHT_Control	chr1	233623225	233623579	-15332843	+	L1MA5A	LINE	L1	5936	6297	0	3
437	chr1	233714952	233714953	chunk0020_144_1	22.98845	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	233714837	233715454	-15240968	-	LTR82B	LTR	ERVL	-6	824	189	3
438	chr1	233981359	233981360	chunk0020_153_1	5.54895	AR_DHT_Control	chr1	233981023	233981929	-14974493	-	L1MD2	LINE	L1	-15	6344	5404	3
439	chr1	234437951	234437952	chunk0020_168_1	17.5792	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	234437554	234439543	-14516879	+	L1MEf	LINE	L1	44	2082	-4160	3
440	chr1	234610943	234610944	chunk0020_180_1	5.68236	AR_DHT_Control	chr1	234610919	234610971	-14345451	+	G-rich	Low_complexity	Low_complexity	1	52	0	3
441	chr1	234831411	234831412	chunk0020_187_1	14.4596	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	234831400	234831658	-14124764	+	AluJr	SINE	Alu	1	278	-34	3
442	chr1	234862027	234862028	chunk0020_188_1	33.6479	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	234861430	234862046	-14094376	+	L1ME4b	LINE	L1	5	671	-221	3
443	chr1	235769238	235769239	chunk0020_233_1	6.9447	AR_DHT_Control	chr1	235768948	235769357	-13187065	-	L2b	LINE	L2	0	3375	2949	3
444	chr1	235802636	235802637	chunk0020_236_1	8.62865	AR_DHT_Control	chr1	235802470	235802705	-13153717	+	L2b	LINE	L2	3058	3321	-54	3
445	chr1	236097337	236097338	chunk0020_248_1	88.7408	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;Merged_Lncap_AR_Veh	chr1	236097247	236097348	-12859074	-	LTR10A	LTR	ERV1	-357	252	106	3
446	chr1	231861951	231861952	chunk0020_26_1	9.41864	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	231861904	231862019	-17094403	-	MER63B	DNA	hAT-Blackjack	0	436	317	3
447	chr1	237029546	237029547	chunk0020_287_1	3.55697	AR_DHT_Control	chr1	237029334	237029551	-11926871	+	Plat_L3	LINE	CR1	2234	2466	-1120	3
448	chr1	237679979	237679980	chunk0020_318_1	5.66005	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	237679933	237680091	-11276331	+	MIRb	SINE	MIR	11	181	-87	3
449	chr1	239084818	239084819	chunk0020_342_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	239079239	239085375	-9871047	-	L1PB1	LINE	L1	-3	6864	575	3
450	chr1	239696331	239696332	chunk0020_363_1	14.5159	AR_DHT_Control	chr1	239696324	239696356	-9260066	+	MIRc	SINE	MIR	218	249	-19	3
451	chr1	239761109	239761110	chunk0020_369_1	5.93784	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	239760590	239762174	-9194248	-	L1MEc	LINE	L1	-873	1807	35	3
452	chr1	239859256	239859257	chunk0020_375_1	5.88709	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	239858591	239859393	-9097029	-	L1MB5	LINE	L1	-9	6165	5370	3
453	chr1	241306544	241306545	chunk0020_407_1	7.66459	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	241306128	241306853	-7649569	+	(CA)n	Simple_repeat	Simple_repeat	1	728	0	3
454	chr1	241457483	241457484	chunk0020_411_1	4.15945	AR_DHT_Control	chr1	241457254	241457829	-7498593	-	MER67C	LTR	ERV1	-96	615	13	3
455	chr1	242108352	242108353	chunk0020_442_1	8.51012	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	242108341	242108570	-6847852	+	L2	LINE	L2	334	584	-2835	3
456	chr1	232665268	232665269	chunk0020_69_1	25.534	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	232665139	232665844	-16290578	+	L1MEg	LINE	L1	1307	2100	-3984	3
457	chr10	4141551	4141552	chunk0021_143_1	7.83042	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	4141338	4141776	-129655646	-	L1MCc	LINE	L1	-5172	1251	784	3
458	chr10	4751602	4751603	chunk0021_156_1	5.48709	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	4750107	4751884	-129045538	+	L1MEf	LINE	L1	595	2392	-3754	3
459	chr10	5071914	5071915	chunk0021_162_1	5.6425	AR_DHT_Control	chr10	5071504	5072037	-128725385	+	MER67A	LTR	ERV1	1	542	-1	3
460	chr10	5780610	5780611	chunk0021_198_1	14.35285	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	5780249	5781345	-128016077	+	L1ME2	LINE	L1	3963	5085	-1061	3
461	chr10	547021	547022	chunk0021_24_1	18.05815	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	546302	547141	-133250281	-	Charlie1	DNA	hAT-Charlie	-150	2631	1669	3
462	chr1	242855017	242855018	chunk0021_242_1	6.44773	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	242849171	242855668	-6100754	-	L1PB1	LINE	L1	-1	6866	260	3
463	chr1	244545710	244545711	chunk0021_290_1	5.9324	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	244544099	244546064	-4410358	+	ERVL-B4-int	LTR	ERVL	1744	3742	-1972	3
464	chr1	245062988	245062989	chunk0021_314_1	6.7814	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	245062646	245063542	-3892880	-	ERV3-16A3_I-int	LTR	ERVL	-3579	1647	740	3
465	chr1	245277137	245277138	chunk0021_320_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	245276875	245277255	-3679167	+	MLT1C	LTR	ERVL-MaLR	80	455	-12	3
466	chr10	848431	848432	chunk0021_33_1	5.40763	AR_DHT_Control	chr10	848195	848770	-132948652	+	L1MC1	LINE	L1	613	1242	-5158	3
467	chr10	853241	853242	chunk0021_35_1	7.24519	AR_DHT_Control	chr10	853195	853401	-132944021	-	Tigger1	DNA	TcMar-Tigger	0	2418	2216	3
468	chr1	246404907	246404908	chunk0021_374_1	45.4378	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	246404902	246404960	-2551462	-	L1MA5	LINE	L1	0	6300	6257	3
469	chr1	246689710	246689711	chunk0021_405_1	5.24411	AR_DHT_Control	chr1	246689571	246689829	-2266593	+	LTR41	LTR	ERVL	24	280	-488	3
470	chr1	246710164	246710165	chunk0021_406_1	6.48643	AR_DHT_Control	chr1	246710027	246710263	-2246159	-	MER67A	LTR	ERV1	0	543	288	3
471	chr1	246775541	246775542	chunk0021_410_1	79.45942	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	246775428	246775772	-2180650	-	L1ME3B	LINE	L1	-1954	4192	3825	3
472	chr1	246845905	246845906	chunk0021_414_1	14.42046	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	246845894	246845962	-2110460	-	MER63B	DNA	hAT-Blackjack	-371	65	3	3
473	chr1	247035172	247035173	chunk0021_422_1	5.69781	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	247035069	247035195	-1921227	-	HERVL74-int	LTR	ERVL	-3189	140	2	3
474	chr1	248205316	248205317	chunk0021_439_1	9.01771	AR_DHT_Control	chr1	248204246	248210286	-746136	-	L1PB1	LINE	L1	-1	6866	833	3
475	chr10	264220	264221	chunk0021_6_1	10.4378	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	264119	264297	-133533125	-	LTR56	LTR	ERV1	-111	334	153	3
476	chr10	1375792	1375793	chunk0021_69_1	6.46845	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	1375735	1376104	-132421318	+	(CA)n	Simple_repeat	Simple_repeat	1	380	0	3
477	chr10	2672533	2672534	chunk0021_94_1	6.75904	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	2672274	2672733	-131124689	-	MLT1H	LTR	ERVL-MaLR	-46	503	66	3
478	chr10	10049823	10049824	chunk0022_103_1	20.94404	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	10049817	10050141	-123747281	+	AluJr	SINE	Alu	1	302	-10	3
479	chr10	10101800	10101801	chunk0022_106_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	10101261	10103900	-123693522	-	LTR53-int	LTR	ERVL	-325	3004	315	3
480	chr10	11512725	11512726	chunk0022_118_1	3.72052	AR_DHT_Control	chr10	11512575	11512807	-122284615	+	L2c	LINE	L2	2911	3166	-221	3
481	chr10	13556954	13556955	chunk0022_199_1	3.9241	AR_DHT_Control	chr10	13556915	13557151	-120240271	-	HAL1	LINE	L1	-2295	212	1	3
482	chr10	13587508	13587509	chunk0022_201_1	12.831	AR_DHT_Control	chr10	13587325	13587915	-120209507	+	MER51C	LTR	ERV1	1	639	-1	3
483	chr10	14413680	14413681	chunk0022_243_1	5.6503	AR_DHT_Control	chr10	14413626	14414056	-119383366	+	L1MA9	LINE	L1	5703	6161	-130	3
484	chr10	15232413	15232414	chunk0022_279_1	35.13399	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	15232170	15232526	-118564896	+	L2a	LINE	L2	3017	3425	-1	3
485	chr10	15797605	15797606	chunk0022_308_1	33.58194	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	15797504	15797652	-117999770	-	L1ME4b	LINE	L1	-379	513	363	3
486	chr10	16166702	16166703	chunk0022_317_1	7.53305	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	16165423	16167378	-117630044	-	HERVL-int	LTR	ERVL	0	5654	3709	3
487	chr10	16559168	16559169	chunk0022_330_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	16554152	16559883	-117237539	-	L1PA15	LINE	L1	-360	6507	4	3
488	chr10	16897137	16897138	chunk0022_344_1	15.1785	AR_DHT_Control	chr10	16895383	16897909	-116899513	-	L1MDb	LINE	L1	-3493	3044	404	3
489	chr10	17585022	17585023	chunk0022_378_1	9.21264	AR_DHT_Control	chr10	17584990	17585409	-116212013	+	MER57A1	LTR	ERV1	11	432	0	3
490	chr10	18640642	18640643	chunk0022_418_1	6.13293	AR_DHT_Control	chr10	18640565	18640768	-115156654	+	L1ME2	LINE	L1	5943	6162	-2	3
491	chr10	19184169	19184170	chunk0022_425_1	7.22694	AR_DHT_Control	chr10	19184004	19184384	-114613038	-	LTR86A1	LTR	ERVL	-129	384	4	4
492	chr10	19296847	19296848	chunk0022_428_1	4.30231	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	19296723	19297104	-114500318	+	L4_A_Mam	LINE	RTE-X	4537	4913	-77	4
493	chr10	19904405	19904406	chunk0022_451_1	6.49378	AR_DHT_Control	chr10	19904349	19904783	-113892639	-	L1PBa	LINE	L1	-6663	200	1	4
494	chr10	23304605	23304606	chunk0023_116_1	6.88185	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	23303758	23305354	-110492068	+	L1M3a	LINE	L1	9	1088	-4867	4
495	chr10	24251840	24251841	chunk0023_153_1	11.02048	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	24251721	24251994	-109545428	+	MIRb	SINE	MIR	4	259	-9	4
496	chr10	25119464	25119465	chunk0023_193_1	16.44842	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	25119417	25119511	-108677911	-	L1ME4a	LINE	L1	-538	5586	5494	4
497	chr10	25280753	25280754	chunk0023_203_1	7.36432	AR_DHT_Control	chr10	25280741	25280853	-108516569	+	L1MEd	LINE	L1	2761	2821	-3325	4
498	chr10	25319287	25319288	chunk0023_204_1	18.7748	AR_DHT_Control	chr10	25319099	25319454	-108477968	+	L2c	LINE	L2	3019	3366	-9	4
499	chr10	25367816	25367817	chunk0023_209_1	7.36432	AR_DHT_Control	chr10	25367655	25367882	-108429540	-	L1ME3	LINE	L1	-3623	2523	2289	4
500	chr10	25397121	25397122	chunk0023_210_1	7.56068	AR_DHT_Control	chr10	25397094	25397205	-108400217	-	MLT1E1A	LTR	ERVL-MaLR	-497	156	45	4
501	chr10	25659586	25659587	chunk0023_217_1	5.64367	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	25658640	25659930	-108137492	-	L1MA2	LINE	L1	-2807	4758	3415	4
502	chr10	25665897	25665898	chunk0023_219_1	20.43272	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	25665617	25666627	-108130795	-	L1ME1	LINE	L1	-5292	1108	50	4
503	chr10	27547531	27547532	chunk0023_259_1	19.40829	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	27547351	27547863	-106249559	-	L2a	LINE	L2	-1	3425	2843	4
504	chr10	28900643	28900644	chunk0023_308_1	8.22827	AR_DHT_Control	chr10	28900508	28900838	-104896584	+	MLT2B4	LTR	ERVL	1	355	-165	4
505	chr10	29012618	29012619	chunk0023_309_1	4.42675	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	29012534	29012624	-104784798	-	L1MD2	LINE	L1	-1	6358	6267	4
506	chr10	29044065	29044066	chunk0023_312_1	10.3174	AR_DHT_Control	chr10	29043902	29044102	-104753320	-	AluJb	SINE	Alu	-24	288	86	4
507	chr10	29534778	29534779	chunk0023_341_1	15.17966	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	29534638	29534840	-104262582	+	MIRb	SINE	MIR	26	250	-18	4
508	chr10	29791809	29791810	chunk0023_353_1	12.57703	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr10	29791665	29791819	-104005603	+	MER5A	DNA	hAT-Charlie	3	189	0	4
509	chr10	29998167	29998168	chunk0023_362_1	14.69389	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr10	29998006	29998439	-103798983	+	(AC)n	Simple_repeat	Simple_repeat	1	460	0	4
510	chr10	30231188	30231189	chunk0023_373_1	5.9729	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	30230803	30231435	-103565987	+	LTR36	LTR	ERV1	1	611	0	4
511	chr10	30414239	30414240	chunk0023_378_1	7.36432	AR_DHT_Control	chr10	30414058	30414258	-103383164	-	MamGypLTR3a	LTR	Gypsy	-159	822	639	4
512	chr10	30437396	30437397	chunk0023_379_1	5.60066	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	30437330	30437549	-103359873	-	MIR	SINE	MIR	-26	236	31	4
513	chr10	31233514	31233515	chunk0023_413_1	8.64577	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	31232608	31237348	-102560074	+	L1MA5	LINE	L1	401	5826	-1736	4
514	chr10	31508403	31508404	chunk0023_420_1	4.55016	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	31505105	31509564	-102287858	-	L1MA4A	LINE	L1	-2314	5248	720	4
515	chr10	32332432	32332433	chunk0023_458_1	13.16419	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr10	32332363	32332572	-101464850	+	MLT1F	LTR	ERVL-MaLR	1	241	-307	4
516	chr10	21965679	21965680	chunk0023_60_1	56.3318	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	21965424	21965940	-111831482	+	MER41C	LTR	ERV1	1	521	0	4
517	chr10	22278419	22278420	chunk0023_81_1	14.0237	AR_DHT_Control	chr10	22278132	22278435	-111518987	+	AluY	SINE	Alu	1	302	-9	4
518	chr10	34633516	34633517	chunk0024_105_1	58.5013	AR_DHT_Control	chr10	34633071	34633925	-99163497	-	L1MA7	LINE	L1	-39	6252	5410	4
519	chr10	32862707	32862708	chunk0024_11_1	35.58731	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	32862565	32863336	-100934086	+	L1M2a	LINE	L1	5028	5844	-1317	4
520	chr10	34999309	34999310	chunk0024_131_1	11.2514	AR_DHT_Control	chr10	34999278	34999582	-98797840	+	ERVL-B4-int	LTR	ERVL	422	726	-4988	4
521	chr10	35149399	35149400	chunk0024_142_1	5.20246	AR_DHT_Control	chr10	35148992	35149422	-98648000	-	L2c	LINE	L2	0	3387	2911	4
522	chr10	35237839	35237840	chunk0024_147_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	35237539	35237931	-98559491	-	LTR49-int	LTR	ERV1	-7115	1092	721	4
523	chr10	35250552	35250553	chunk0024_148_1	5.16131	AR_DHT_Control	chr10	35250433	35250615	-98546807	+	MER5A	DNA	hAT-Charlie	7	189	0	4
524	chr10	35470326	35470327	chunk0024_157_1	7.62275	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	35469562	35470366	-98327056	+	(GACA)n	Simple_repeat	Simple_repeat	1	818	0	4
525	chr10	35591318	35591319	chunk0024_163_1	7.27655	AR_DHT_Control	chr10	35591247	35592330	-98205092	+	L1MEc	LINE	L1	34	1353	-1399	4
526	chr10	36254432	36254433	chunk0024_196_1	22.50674	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	36254303	36254499	-97542923	-	MIR	SINE	MIR	-25	243	19	4
527	chr10	36321745	36321746	chunk0024_197_1	8.93723	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	36321209	36322545	-97474877	+	L1PA15	LINE	L1	4784	6158	-7	4
528	chr10	38579003	38579004	chunk0024_242_1	55.8241	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;Merged_Lncap_AR_Veh	chr10	38573338	38582821	-95214601	+	(AATGG)n	Simple_repeat	Simple_repeat	1	9498	0	4
529	chr10	38912586	38912587	chunk0024_254_1	43.39064	Merged_Lncap_AR_Veh;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	38911580	38913438	-94883984	+	(GAGTG)n	Simple_repeat	Simple_repeat	1	1866	0	4
530	chr10	38918677	38918678	chunk0024_255_1	8.0483	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	38918658	38918713	-94878709	+	AluSz6	SINE	Alu	225	280	-32	4
531	chr10	38919182	38919183	chunk0024_257_1	34.70696	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr10	38918720	38919342	-94878080	+	(GAATG)n	Satellite	Satellite	4	625	0	4
532	chr10	38919909	38919910	chunk0024_260_1	36.49164	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr10	38919408	38919967	-94877455	+	(GAATG)n	Satellite	Satellite	4	561	0	4
533	chr10	41858423	41858424	chunk0024_267_1	11.6789	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	41856985	41889331	-91908091	+	(ATGGA)n	Simple_repeat	Simple_repeat	1	32999	0	4
534	chr10	41859518	41859519	chunk0024_268_1	9.51856	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	41856985	41889331	-91908091	+	(ATGGA)n	Simple_repeat	Simple_repeat	1	32999	0	4
535	chr10	41860071	41860072	chunk0024_271_1	29.80409	SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh;AR_DHT_Control	chr10	41856985	41889331	-91908091	+	(ATGGA)n	Simple_repeat	Simple_repeat	1	32999	0	4
536	chr10	41875457	41875458	chunk0024_273_1	53.93303	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh;AR_DHT_Control	chr10	41856985	41889331	-91908091	+	(ATGGA)n	Simple_repeat	Simple_repeat	1	32999	0	4
537	chr10	41882047	41882048	chunk0024_276_1	47.93866	AR_DHT_Control;Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	41856985	41889331	-91908091	+	(ATGGA)n	Simple_repeat	Simple_repeat	1	32999	0	4
538	chr10	41884019	41884020	chunk0024_280_1	32.28828	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;Merged_Lncap_AR_Veh	chr10	41856985	41889331	-91908091	+	(ATGGA)n	Simple_repeat	Simple_repeat	1	32999	0	4
539	chr10	41903479	41903480	chunk0024_282_1	27.7493	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr10	41887331	41916263	-91881159	+	(AATGG)n	Simple_repeat	Simple_repeat	1	29510	0	4
540	chr10	41915020	41915021	chunk0024_283_1	13.2094	AR_DHT_Control	chr10	41887331	41916263	-91881159	+	(AATGG)n	Simple_repeat	Simple_repeat	1	29510	0	4
541	chr10	42080069	42080070	chunk0024_288_1	11.4584	AR_DHT_Control	chr10	42079956	42080088	-91717334	+	(ATCGAATGGAATC)n	Simple_repeat	Simple_repeat	1	149	0	4
542	chr10	43628545	43628546	chunk0024_353_1	31.91735	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	43628446	43629216	-90168206	+	LTR101_Mam	LTR	ERVL	1	807	-22	4
543	chr10	44091698	44091699	chunk0024_361_1	33.7193	AR_DHT_Control	chr10	44090920	44097056	-89700366	+	L1PA6	LINE	L1	4	6152	-2	4
544	chr10	44633303	44633304	chunk0024_376_1	6.86162	AR_DHT_Control	chr10	44633180	44633508	-89163914	+	L1M4	LINE	L1	5202	5551	-628	4
545	chr10	44636790	44636791	chunk0024_377_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	44634769	44637404	-89160018	-	Tigger2	DNA	TcMar-Tigger	-34	2684	1	4
546	chr10	33472280	33472281	chunk0024_39_1	14.5882	AR_DHT_Control	chr10	33471801	33472340	-100325082	-	L1MA2	LINE	L1	0	6304	5737	4
547	chr10	45823073	45823074	chunk0024_421_1	12.1886	AR_DHT_Control	chr10	45823073	45823458	-87973964	+	L2a	LINE	L2	2960	3421	-5	4
548	chr10	34469687	34469688	chunk0024_91_1	117.2435	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	34469660	34469855	-99327567	+	L1ME4b	LINE	L1	696	890	-2	4
549	chr10	34532949	34532950	chunk0024_98_1	11.1388	AR_DHT_Control	chr10	34532847	34533180	-99264242	-	Tigger3a	DNA	TcMar-Tigger	0	348	3	4
550	chr10	50596767	50596768	chunk0025_102_1	4.46365	AR_DHT_Control	chr10	50596720	50596899	-83200523	-	MIRb	SINE	MIR	-9	259	83	4
551	chr10	50614609	50614610	chunk0025_103_1	4.15002	AR_DHT_Control	chr10	50614485	50614679	-83182743	+	MER5A	DNA	hAT-Charlie	1	189	0	4
552	chr10	51074703	51074704	chunk0025_108_1	18.29367	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr10	51074668	51074730	-82722692	+	(GAGCTG)n	Simple_repeat	Simple_repeat	1	62	0	4
553	chr10	51862130	51862131	chunk0025_128_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	51861790	51862787	-81934635	-	LTR27E	LTR	ERV1	0	1077	1	4
554	chr10	52255675	52255676	chunk0025_148_1	30.18726	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr10	52255573	52255713	-81541709	-	L2c	LINE	L2	-36	3339	3185	4
555	chr10	53123331	53123332	chunk0025_180_1	5.6425	AR_DHT_Control	chr10	53122849	53123789	-80673633	-	MER21-int	LTR	ERVL	-1114	3077	2072	4
556	chr10	53404033	53404034	chunk0025_199_1	13.69123	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	53402938	53405196	-80392226	+	L1PBb	LINE	L1	186	1643	-5220	4
557	chr10	53534057	53534058	chunk0025_201_1	11.01058	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	53533996	53534099	-80263323	-	LTR16E1	LTR	ERVL	-24	514	413	4
558	chr10	53986594	53986595	chunk0025_224_1	30.2719	AR_DHT_Control	chr10	53986090	53986865	-79810557	+	L1MB1	LINE	L1	5278	6043	-125	4
559	chr10	54223419	54223420	chunk0025_236_1	103.0946	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	54223330	54223544	-79573878	-	L1ME1	LINE	L1	-1066	5080	4873	4
560	chr10	54277401	54277402	chunk0025_240_1	25.7015	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	54277271	54277453	-79519969	+	MLT1I-int	LTR	ERVL-MaLR	26	212	-1175	4
561	chr10	55409866	55409867	chunk0025_262_1	11.3519	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	55409575	55409970	-78387452	+	L1ME5	LINE	L1	5776	6187	-7	4
562	chr10	58509736	58509737	chunk0025_361_1	37.666	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	58509038	58510728	-75286694	+	L2a	LINE	L2	1242	3057	-362	4
563	chr10	58630041	58630042	chunk0025_366_1	5.77762	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	58629990	58630159	-75167263	+	MLT1M	LTR	ERVL-MaLR	95	262	-410	4
564	chr10	59375565	59375566	chunk0025_396_1	14.14623	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	59375293	59375779	-74421643	-	MER110A	LTR	ERV1	0	491	44	4
565	chr10	49419182	49419183	chunk0025_50_1	9.06209	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	49419077	49419235	-84378187	+	MIRc	SINE	MIR	13	196	-72	4
566	chr10	50561480	50561481	chunk0025_94_1	26.43223	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	50561395	50561483	-83235939	+	MIR3	SINE	MIR	113	201	-7	4
567	chr10	62048325	62048326	chunk0026_129_1	8.49128	AR_DHT_Control	chr10	62048225	62048433	-71748989	-	L2c	LINE	L2	-5	3382	3183	4
568	chr10	62292219	62292220	chunk0026_142_1	32.4975	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	62292077	62292312	-71505110	+	L4_A_Mam	LINE	RTE-X	3837	4059	-931	4
569	chr10	63297843	63297844	chunk0026_174_1	6.04605	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	63297172	63298337	-70499085	+	LTR2752	LTR	ERV1	64	1246	-17	4
570	chr10	63487565	63487566	chunk0026_181_1	37.8227	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	63487557	63487711	-70309711	-	L2c	LINE	L2	-2183	1236	1073	4
571	chr10	60630857	60630858	chunk0026_20_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	60630837	60631139	-73166283	-	L2a	LINE	L2	-646	2773	2471	4
572	chr10	60646119	60646120	chunk0026_21_1	12.9431	AR_DHT_Control	chr10	60645804	60646430	-73150992	-	L2c	LINE	L2	-17	3409	2719	4
573	chr10	64796188	64796189	chunk0026_220_1	7.36432	AR_DHT_Control	chr10	64795873	64796268	-69001154	+	L2a	LINE	L2	2911	3361	-65	4
574	chr10	64867973	64867974	chunk0026_221_1	82.1651	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	64867287	64867987	-68929435	-	MER61E	LTR	ERV1	-5	774	1	4
575	chr10	66414963	66414964	chunk0026_248_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	66414210	66418556	-67378866	+	L1MA4A	LINE	L1	720	5092	-2470	4
576	chr10	66487662	66487663	chunk0026_250_1	12.3053	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	66487526	66487699	-67309723	+	L1MA9	LINE	L1	6125	6289	-23	4
577	chr10	66513547	66513548	chunk0026_252_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	66513274	66513805	-67283617	-	L1MA5A	LINE	L1	-5290	2276	1357	4
578	chr10	66656566	66656567	chunk0026_257_1	29.94405	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	66656172	66656587	-67140835	+	L3	LINE	CR1	3646	4089	-10	4
579	chr10	68620497	68620498	chunk0026_344_1	8.27376	AR_DHT_Control	chr10	68620204	68621142	-65176280	-	L1MB8	LINE	L1	-57	6121	5101	4
580	chr10	69538806	69538807	chunk0026_387_1	6.62034	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	69538736	69538842	-64258580	-	MER115	DNA	hAT-Tip100	-263	430	322	4
581	chr10	70448619	70448620	chunk0026_414_1	52.9384	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	70448538	70448888	-63348534	+	AluSz	SINE	Alu	1	302	-10	4
582	chr10	74014937	74014938	chunk0027_107_1	18.56256	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	74014708	74014985	-59782437	-	AluJb	SINE	Alu	-26	286	2	4
583	chr10	74688137	74688138	chunk0027_149_1	107.5049	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	74687686	74688449	-59108973	+	L2a	LINE	L2	2542	3426	0	4
584	chr10	74823936	74823937	chunk0027_158_1	9.86811	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	74823843	74824028	-58973394	-	MER131	DNA?	DNA?	0	215	40	4
585	chr10	74947513	74947514	chunk0027_167_1	44.1379	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	74947490	74947532	-58849890	-	L2b	LINE	L2	0	3375	3334	4
586	chr10	75649519	75649520	chunk0027_193_1	15.9321	AR_DHT_Control	chr10	75649424	75650444	-58146978	-	L1MB3	LINE	L1	-327	5856	4801	4
587	chr10	76703424	76703425	chunk0027_236_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	76702610	76705964	-57091458	+	L1M1	LINE	L1	16	3421	-4144	4
588	chr10	77268015	77268016	chunk0027_261_1	7.47918	AR_DHT_Control	chr10	77268007	77268102	-56529320	+	MER94	DNA	hAT-Blackjack	36	132	-2	4
589	chr10	77486507	77486508	chunk0027_278_1	64.2484	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	77486302	77486537	-56310885	+	MIR	SINE	MIR	22	262	0	4
590	chr10	77624694	77624695	chunk0027_295_1	5.95209	AR_DHT_Control	chr10	77624685	77624738	-56172684	-	MIRc	SINE	MIR	-132	136	80	4
591	chr10	78111463	78111464	chunk0027_316_1	5.40815	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	78111374	78111601	-55685821	+	MLT1K	LTR	ERVL-MaLR	60	301	-294	4
592	chr10	78426351	78426352	chunk0027_328_1	85.0445	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	78426321	78426473	-55370949	-	MER63A	DNA	hAT-Blackjack	-45	165	1	4
593	chr10	78513495	78513496	chunk0027_336_1	11.1604	AR_DHT_Control	chr10	78513419	78513560	-55283862	+	L3	LINE	CR1	3305	3449	-650	4
594	chr10	78973541	78973542	chunk0027_358_1	6.9063	AR_DHT_Control	chr10	78973518	78973547	-54823875	+	(CAGCC)n	Simple_repeat	Simple_repeat	1	29	0	4
595	chr10	78995718	78995719	chunk0027_360_1	37.75961	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	78995675	78995896	-54801526	-	MIRc	SINE	MIR	-28	240	1	4
596	chr10	72436093	72436094	chunk0027_38_1	22.04555	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	72435420	72441564	-61355858	+	L1PA6	LINE	L1	177	6327	0	4
597	chr10	79615191	79615192	chunk0027_385_1	21.38964	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	79615150	79615394	-54182028	-	MIRb	SINE	MIR	-13	255	4	4
598	chr10	79996521	79996522	chunk0027_392_1	3.93339	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	79995536	79997000	-53800422	-	L1PA14	LINE	L1	-5256	1437	5	4
599	chr10	80386223	80386224	chunk0027_400_1	26.7525	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	80385803	80386272	-53411150	-	L1MCb	LINE	L1	-1612	4952	4476	4
600	chr10	80468788	80468789	chunk0027_409_1	6.60763	AR_DHT_Control	chr10	80468709	80468858	-53328564	-	AluJb	SINE	Alu	-3	309	137	4
601	chr10	80647484	80647485	chunk0027_417_1	15.25727	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	80647395	80647621	-53149801	+	MER58B	DNA	hAT-Charlie	1	232	-109	4
602	chr10	80783891	80783892	chunk0027_420_1	12.26455	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	80783888	80783909	-53013513	+	(GT)n	Simple_repeat	Simple_repeat	1	21	0	4
603	chr10	80946921	80946922	chunk0027_429_1	38.021	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	80946608	80947008	-52850414	+	MER34C	LTR	ERV1	129	538	-13	4
604	chr10	81286674	81286675	chunk0027_451_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	81286247	81287718	-52509704	+	L1PA15	LINE	L1	9	1561	-5128	4
605	chr10	72876419	72876420	chunk0027_54_1	17.07465	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	72876088	72876858	-60920564	+	L2	LINE	L2	824	1749	-1670	4
606	chr10	73087147	73087148	chunk0027_62_1	5.91555	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	73086969	73087264	-60710158	-	L1MD	LINE	L1	-507	5672	5402	4
607	chr10	73332435	73332436	chunk0027_76_1	10.1791	AR_DHT_Control	chr10	73331986	73333921	-60463501	+	L1MCa	LINE	L1	36	2140	-4611	4
608	chr10	73359732	73359733	chunk0027_78_1	5.56779	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	73359454	73360513	-60436909	+	L1MC4	LINE	L1	6945	8039	-3	4
609	chr10	87854332	87854333	chunk0028_174_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	87854098	87854600	-45942822	+	MLT1H-int	LTR	ERVL-MaLR	100	653	-756	5
610	chr10	88440005	88440006	chunk0028_182_1	20.56435	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	88439826	88440128	-45357294	+	L2c	LINE	L2	3053	3379	-8	5
611	chr10	89141549	89141550	chunk0028_207_1	46.921	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	89141511	89141605	-44655817	-	MIRb	SINE	MIR	-22	246	153	5
612	chr10	89251189	89251190	chunk0028_208_1	4.83532	AR_DHT_Control	chr10	89251113	89251326	-44546096	-	MIR	SINE	MIR	-18	244	14	5
613	chr10	89445518	89445519	chunk0028_213_1	14.9059	AR_DHT_Control	chr10	89444635	89450769	-44346653	+	L1PA6	LINE	L1	5	6154	0	5
614	chr10	89628149	89628150	chunk0028_223_1	76.7424	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	89627890	89628686	-44168736	+	L1MB8	LINE	L1	5356	6163	-15	5
615	chr10	89908415	89908416	chunk0028_235_1	19.88381	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	89905789	89908834	-43888588	-	L1PA13	LINE	L1	0	6783	3697	5
616	chr10	90289894	90289895	chunk0028_244_1	4.89968	AR_DHT_Control	chr10	90289883	90289928	-43507494	+	(AC)n	Simple_repeat	Simple_repeat	1	45	0	5
617	chr10	90589953	90589954	chunk0028_257_1	34.8543	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	90589940	90590120	-43207302	-	MER117	DNA	hAT-Charlie	-1	196	2	5
618	chr10	90749782	90749783	chunk0028_260_1	6.93299	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	90749680	90749847	-43047575	-	MIRb	SINE	MIR	-79	189	18	5
619	chr10	90847131	90847132	chunk0028_261_1	5.1	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	90847109	90847308	-42950114	+	MIRc	SINE	MIR	60	268	0	5
620	chr10	91023592	91023593	chunk0028_277_1	124.6034	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	91023556	91023736	-42773686	-	MamGypsy2-LTR	LTR	Gypsy	0	183	1	5
621	chr10	91527733	91527734	chunk0028_295_1	5.64811	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	91527647	91527791	-42269631	+	L1ME3G	LINE	L1	556	708	-216	5
622	chr10	91740535	91740536	chunk0028_311_1	8.11543	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	91737875	91741030	-42056392	-	L1PA15	LINE	L1	-743	3634	448	5
623	chr10	91804305	91804306	chunk0028_317_1	112.2299	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr10	91804216	91804314	-41993108	-	L2a	LINE	L2	-3	3423	3320	5
624	chr10	91977406	91977407	chunk0028_327_1	20.0638	AR_DHT_Control	chr10	91977290	91977850	-41819572	-	L1MC1	LINE	L1	-377	5956	5370	5
625	chr10	92826648	92826649	chunk0028_375_1	28.56306	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	92826510	92827023	-40970399	-	L2a	LINE	L2	0	3426	2890	5
626	chr10	92849922	92849923	chunk0028_376_1	8.01864	AR_DHT_Control	chr10	92849877	92849957	-40947465	+	L2c	LINE	L2	3305	3381	-6	5
627	chr10	92903851	92903852	chunk0028_385_1	119.0923	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	92903637	92905466	-40891956	-	L1MC2	LINE	L1	-11	7128	5262	5
628	chr10	93745127	93745128	chunk0028_429_1	27.80329	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	93745062	93745140	-40052282	+	L2a	LINE	L2	3338	3425	-1	5
629	chr10	94489254	94489255	chunk0028_452_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	94488690	94489598	-39307824	-	L1MA2	LINE	L1	-6649	916	17	5
630	chr10	95133314	95133315	chunk0028_457_1	5.40815	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	95132810	95133902	-38663520	-	HUERS-P3-int	LTR	ERV1	-6351	1067	23	5
631	chr10	95172256	95172257	chunk0028_458_1	6.48643	AR_DHT_Control	chr10	95172067	95172312	-38625110	+	MIRb	SINE	MIR	4	259	-9	5
632	chr10	83653067	83653068	chunk0028_68_1	17.29229	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	83653004	83653115	-50144307	-	L1M3f	LINE	L1	-5214	114	1	4
633	chr10	84108220	84108221	chunk0028_94_1	7.36432	AR_DHT_Control	chr10	84108194	84108444	-49688978	-	PABL_B	LTR	ERV1	-1	666	419	4
634	chr10	84288014	84288015	chunk0028_99_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	84287573	84288060	-49509362	-	L2	LINE	L2	-2083	1336	816	4
635	chr10	98159555	98159556	chunk0029_114_1	17.8376	AR_DHT_Control	chr10	98159401	98160261	-35637161	-	L1MC4a	LINE	L1	-715	7327	6307	5
636	chr10	98582152	98582153	chunk0029_127_1	6.86162	AR_DHT_Control	chr10	98581609	98582484	-35214938	+	MER97a	DNA	hAT-Tip100	3	886	-4	5
637	chr10	98653110	98653111	chunk0029_131_1	23.6465	AR_DHT_Control	chr10	98653008	98655288	-35142134	-	L1MCa	LINE	L1	-3644	2920	398	5
638	chr10	99042601	99042602	chunk0029_134_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	99041170	99043202	-34754220	+	L1PA16	LINE	L1	829	3129	-5032	5
639	chr10	101694348	101694349	chunk0029_203_1	5.14476	AR_DHT_Control	chr10	101694327	101694375	-32103047	+	G-rich	Low_complexity	Low_complexity	1	51	0	5
640	chr10	101868165	101868166	chunk0029_208_1	47.9985	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	101867847	101868789	-31928633	+	Tigger2	DNA	TcMar-Tigger	1788	2591	-127	5
641	chr10	102658637	102658638	chunk0029_243_1	39.23345	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	102658633	102658701	-31138721	-	L2a	LINE	L2	-2	3424	3354	5
642	chr10	103992038	103992039	chunk0029_298_1	7.58612	AR_DHT_Control	chr10	103991957	103992120	-29805302	-	L2b	LINE	L2	-116	3259	3109	5
643	chr10	96124507	96124508	chunk0029_34_1	6.48643	AR_DHT_Control	chr10	96124231	96125093	-37672329	-	L1M4c	LINE	L1	-5493	2074	1186	5
644	chr10	107627109	107627110	chunk0029_362_1	77.9832	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	107626676	107627525	-26169897	+	L1MB8	LINE	L1	5283	6114	-64	5
645	chr10	108091007	108091008	chunk0029_375_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	108090410	108091125	-25706297	+	L1M1	LINE	L1	697	1412	-6153	5
646	chr10	109633235	109633236	chunk0029_402_1	23.2028	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	109632461	109633334	-24164088	+	MER4-int	LTR	ERV1	1594	2495	-4103	5
647	chr10	110045967	110045968	chunk0029_433_1	40.9424	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	110045479	110046488	-23750934	+	Tigger2b_Pri	DNA	TcMar-Tigger	2	1067	-1	5
648	chr10	97337146	97337147	chunk0029_96_1	37.52276	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	97337090	97337311	-36460111	+	MIRc	SINE	MIR	13	260	-8	5
649	chr10	97344678	97344679	chunk0029_98_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	97344399	97345030	-36452392	+	L2a	LINE	L2	2182	2856	-563	5
650	chr10	113720580	113720581	chunk0030_144_1	5.0408	AR_DHT_Control	chr10	113720172	113720842	-20076580	-	L1ME3A	LINE	L1	-15	6158	5397	5
651	chr10	114066965	114066966	chunk0030_166_1	23.84114	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	114066964	114067019	-19730403	-	MIR3	SINE	MIR	-3	205	150	5
652	chr10	114195360	114195361	chunk0030_180_1	20.1349	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	114195059	114196161	-19601261	-	L1MD1	LINE	L1	-3213	3324	2208	5
653	chr10	114636227	114636228	chunk0030_213_1	31.93214	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr10	114635939	114636234	-19161188	-	L2c	LINE	L2	-6	3381	3051	5
654	chr10	114722961	114722962	chunk0030_221_1	7.66966	AR_DHT_Control	chr10	114722793	114723116	-19074306	+	L2c	LINE	L2	3056	3387	0	5
655	chr10	115031148	115031149	chunk0030_238_1	20.1485	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	115030896	115031250	-18766172	+	L2b	LINE	L2	2912	3298	-128	5
656	chr10	116213292	116213293	chunk0030_264_1	24.89631	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	116213057	116213333	-17584089	+	L1M5	LINE	L1	5535	5823	-301	5
657	chr10	117921538	117921539	chunk0030_315_1	4.53037	AR_DHT_Control	chr10	117921460	117921961	-15875461	+	L2a	LINE	L2	2594	3153	-273	5
658	chr10	118431360	118431361	chunk0030_340_1	20.10317	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	118431229	118431793	-15365629	-	L1M5	LINE	L1	-1230	4916	4295	5
659	chr10	119041742	119041743	chunk0030_369_1	9.96971	AR_DHT_Control	chr10	119041640	119041744	-14755678	+	Tigger19b	DNA	TcMar-Tigger	364	459	-91	5
660	chr10	120085300	120085301	chunk0030_405_1	49.5722	AR_DHT_Control	chr10	120085201	120085360	-13712062	+	L1ME5	LINE	L1	5887	6058	-136	5
661	chr10	120101236	120101237	chunk0030_406_1	68.3392	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	120101137	120101265	-13696157	-	FLAM_C	SINE	Alu	-173	129	1	5
662	chr10	121022117	121022118	chunk0030_448_1	6.13992	AR_DHT_Control	chr10	121021748	121023153	-12774269	-	HAL1	LINE	L1	-6	2501	1076	5
663	chr10	111916324	111916325	chunk0030_56_1	7.48106	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	111916106	111916332	-21881090	+	MER58A	DNA	hAT-Charlie	1	216	-8	5
664	chr10	111963184	111963185	chunk0030_61_1	28.15804	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	111962711	111963243	-21834179	+	L2a	LINE	L2	2905	3408	-18	5
665	chr10	112396425	112396426	chunk0030_94_1	64.3392	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	112396308	112396532	-21400890	-	MER58A	DNA	hAT-Charlie	0	224	2	5
666	chr10	124186894	124186895	chunk0031_103_1	6.13915	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	124186846	124187169	-9610253	+	MLT1F	LTR	ERVL-MaLR	7	346	-202	5
667	chr10	124739285	124739286	chunk0031_122_1	7.15668	AR_DHT_Control	chr10	124739206	124739321	-9058101	+	MIR	SINE	MIR	1	125	-137	5
668	chr10	125282859	125282860	chunk0031_160_1	51.20991	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	125282749	125282901	-8514521	+	L3b	LINE	CR1	4732	4890	-342	5
669	chr10	125416162	125416163	chunk0031_167_1	6.62784	AR_DHT_Control	chr10	125416061	125416184	-8381238	+	(AC)n	Simple_repeat	Simple_repeat	1	123	0	5
670	chr10	125539037	125539038	chunk0031_170_1	102.8412	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	125538993	125539251	-8258171	+	MER130	DNA	DNA	1050	1310	-284	5
671	chr10	125633609	125633610	chunk0031_179_1	78.7052	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	125633498	125633661	-8163761	-	L1ME4c	LINE	L1	-39	791	615	5
672	chr10	121835605	121835606	chunk0031_18_1	26.74528	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	121835462	121835901	-11961521	+	L1MC5	LINE	L1	8831	9276	-28	5
673	chr10	125695125	125695126	chunk0031_189_1	68.60673	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	125694960	125695168	-8102254	+	MamRTE1	LINE	RTE-BovB	1924	2136	-1676	5
674	chr10	127044375	127044376	chunk0031_246_1	204.8943	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	127044209	127044435	-6752987	+	LTR82A	LTR	ERVL	469	691	-181	5
675	chr10	130081991	130081992	chunk0031_359_1	150.8785	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	130081067	130082178	-3715244	+	L1MC4a	LINE	L1	4484	4958	-1256	5
676	chr10	121401369	121401370	chunk0031_4_1	10.8433	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	121401232	121401865	-12395557	+	L1MD1	LINE	L1	5422	6072	-170	5
677	chr10	131877981	131877982	chunk0031_405_1	51.7567	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	131877278	131878532	-1918890	+	L1MC	LINE	L1	3980	5280	-866	5
678	chr10	132364460	132364461	chunk0031_425_1	78.63926	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	132364293	132364784	-1432638	+	(CACTCA)n	Simple_repeat	Simple_repeat	1	557	-29	5
679	chr10	132535175	132535176	chunk0031_439_1	6.28117	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	132535103	132535217	-1262205	+	(TGTGCA)n	Simple_repeat	Simple_repeat	1	124	0	5
680	chr10	132566532	132566533	chunk0031_442_1	6.37684	AR_DHT_Control	chr10	132566518	132566731	-1230691	+	L1M5	LINE	L1	3804	3998	-2148	5
681	chr10	122865019	122865020	chunk0031_63_1	22.40354	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	122864518	122865216	-10932206	-	L1MC2	LINE	L1	-125	6637	5875	5
682	chr10	123180658	123180659	chunk0031_81_1	23.99584	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	123180072	123180801	-10616621	+	L1MB3	LINE	L1	5431	6173	-10	5
683	chr10	123255095	123255096	chunk0031_86_1	13.67817	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	123254329	123255943	-10541479	+	(CAC)n	Simple_repeat	Simple_repeat	1	1663	0	5
684	chr11	3880060	3880061	chunk0032_114_1	8.82835	AR_DHT_Control	chr11	3880045	3880171	-131206451	+	MIRb	SINE	MIR	6	130	-138	5
685	chr11	4152293	4152294	chunk0032_122_1	21.98277	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	4152180	4152387	-130934235	-	L1MEc	LINE	L1	-4149	2251	2038	5
686	chr11	6489515	6489516	chunk0032_193_1	12.711	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	6489491	6489595	-128597027	+	L2a	LINE	L2	3309	3420	-6	5
687	chr11	6676437	6676438	chunk0032_197_1	41.4298	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	6676248	6677443	-128409179	+	L1MA9	LINE	L1	4845	6079	-233	5
688	chr11	9904070	9904071	chunk0032_313_1	100.3576	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	9903429	9904105	-125182517	-	MER50B	LTR	ERV1	0	697	1	5
689	chr11	9931360	9931361	chunk0032_315_1	11.1716	AR_DHT_Control	chr11	9930625	9933967	-125152655	+	L1PA6	LINE	L1	174	3493	-2834	5
690	chr11	10858303	10858304	chunk0032_367_1	7.38866	AR_DHT_Control	chr11	10858287	10858418	-124228204	-	MER5A	DNA	hAT-Charlie	0	189	57	5
691	chr11	11477847	11477848	chunk0032_386_1	29.57195	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr11	11477633	11477864	-123608758	+	LTR78	LTR	ERV1	1037	1299	-5	5
692	chr11	11562806	11562807	chunk0032_387_1	6.86821	AR_DHT_Control	chr11	11562767	11562906	-123523716	-	MIRb	SINE	MIR	-114	154	5	5
693	chr11	11596707	11596708	chunk0032_391_1	6.42963	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	11595514	11597660	-123488962	-	L1PA8A	LINE	L1	-582	6409	4131	5
694	chr11	11616224	11616225	chunk0032_395_1	76.3512	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	11616158	11616599	-123470023	+	L1ME4c	LINE	L1	68	570	-260	5
695	chr11	11692104	11692105	chunk0032_400_1	5.6425	AR_DHT_Control	chr11	11691544	11694642	-123391980	+	L1P2	LINE	L1	1	3085	-3061	5
696	chr11	11841958	11841959	chunk0032_405_1	6.58498	AR_DHT_Control	chr11	11841952	11842009	-123244613	+	(GGC)n	Simple_repeat	Simple_repeat	1	57	0	5
697	chr11	470150	470151	chunk0032_8_1	5.3309	AR_DHT_Control	chr11	469592	470578	-134616044	+	L1MC3	LINE	L1	6558	7751	-131	5
698	chr11	14676260	14676261	chunk0033_128_1	54.55183	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr11	14676214	14676690	-120409932	-	Tigger3c	DNA	TcMar-Tigger	0	602	106	5
699	chr11	15532667	15532668	chunk0033_151_1	98.5201	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	15531923	15533870	-119552752	+	L1MA6	LINE	L1	5120	7024	-236	5
700	chr11	16918759	16918760	chunk0033_203_1	21.05805	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	16918686	16918928	-118167694	-	MER113A	DNA	hAT-Charlie	0	314	54	5
701	chr11	20068488	20068489	chunk0033_301_1	7.59394	AR_DHT_Control	chr11	20068487	20068650	-115017972	+	MIRb	SINE	MIR	4	178	-90	6
702	chr11	20840569	20840570	chunk0033_320_1	17.24699	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	20840320	20840804	-114245818	-	MLT1G	LTR	ERVL-MaLR	0	591	33	6
703	chr11	23153366	23153367	chunk0033_367_1	8.57499	AR_DHT_Control	chr11	23153347	23153668	-111932954	+	L2b	LINE	L2	2987	3344	-43	6
704	chr11	24485459	24485460	chunk0033_394_1	109.9589	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	24485025	24485666	-110600956	-	L1MA1	LINE	L1	0	6302	5657	6
705	chr11	25058695	25058696	chunk0033_428_1	5.14616	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	25058663	25058733	-110027889	-	MIR3	SINE	MIR	-138	130	61	6
706	chr11	25515798	25515799	chunk0033_448_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	25515567	25516357	-109570265	-	LTR1B1	LTR	ERV1	0	818	1	6
707	chr11	13271179	13271180	chunk0033_45_1	36.6352	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	13271104	13271418	-121815204	-	L2b	LINE	L2	0	3387	3040	5
708	chr11	25697913	25697914	chunk0033_457_1	9.06209	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	25696996	25699504	-109387118	+	L1PA15-16	LINE	L1	2645	5128	-1787	6
709	chr11	13480732	13480733	chunk0033_62_1	59.05475	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	13479955	13483886	-121602736	+	L1PA5	LINE	L1	4	3910	-2236	5
710	chr11	14030226	14030227	chunk0033_86_1	17.46416	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	14030005	14030292	-121056330	+	MamTip3	DNA	hAT-Tip100	174	500	0	5
711	chr11	27929837	27929838	chunk0034_111_1	4.74037	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	27929050	27930380	-107156242	-	MER41-int	LTR	ERV1	0	5946	4590	6
712	chr11	28357618	28357619	chunk0034_125_1	4.14652	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	28357430	28357658	-106728964	+	MIR	SINE	MIR	1	251	-11	6
713	chr11	30223950	30223951	chunk0034_153_1	6.05102	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	30223900	30224213	-104862409	-	MER33	DNA	hAT-Charlie	0	324	4	6
714	chr11	30282002	30282003	chunk0034_155_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	30281548	30282996	-104803626	+	L1PA16	LINE	L1	57	1876	-4627	6
715	chr11	30475698	30475699	chunk0034_161_1	34.5076	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	30475283	30477801	-104608821	-	L1ME3D	LINE	L1	-15	6164	3554	6
716	chr11	31114883	31114884	chunk0034_175_1	15.00474	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	31114396	31114936	-103971686	-	L2a	LINE	L2	-168	3258	2645	6
717	chr11	31507577	31507578	chunk0034_180_1	148.1663	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	31507531	31507935	-103578687	+	L1MA8	LINE	L1	5854	6250	-41	6
718	chr11	33064710	33064711	chunk0034_222_1	18.7748	AR_DHT_Control	chr11	33064690	33064754	-102021868	-	L2c	LINE	L2	-30	3357	3295	6
719	chr11	33312940	33312941	chunk0034_227_1	5.24411	AR_DHT_Control	chr11	33312802	33313001	-101773621	-	MIRb	SINE	MIR	-46	222	14	6
720	chr11	33796921	33796922	chunk0034_236_1	52.1237	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	33796178	33797188	-101289434	+	L1MA2	LINE	L1	5573	6553	-249	6
721	chr11	35763503	35763504	chunk0034_347_1	30.7466	AR_DHT_Control	chr11	35763428	35763621	-99323001	+	MIR3	SINE	MIR	19	208	0	6
722	chr11	35901475	35901476	chunk0034_349_1	45.4725	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	35900769	35901490	-99185132	+	L1ME3A	LINE	L1	5331	6125	-48	6
723	chr11	37224910	37224911	chunk0034_399_1	6.6351	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	37223839	37225516	-97861106	-	MER52A	LTR	ERV1	0	1755	1	6
724	chr11	25848888	25848889	chunk0034_4_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	25848430	25851296	-109235326	+	L1M3c	LINE	L1	1359	4034	-3528	6
725	chr11	37364316	37364317	chunk0034_401_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	37363654	37366561	-97720061	+	L1PB3	LINE	L1	3	2004	-4859	6
726	chr11	37365188	37365189	chunk0034_402_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	37363654	37366561	-97720061	+	L1PB3	LINE	L1	3	2004	-4859	6
727	chr11	38533530	38533531	chunk0034_427_1	88.45385	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	38533108	38533775	-96552847	-	HERVL-int	LTR	ERVL	-781	4886	4236	6
728	chr11	39381298	39381299	chunk0034_438_1	4.06817	AR_DHT_Control	chr11	39381117	39382083	-95704539	-	LTR1D	LTR	ERV1	0	975	1	6
729	chr11	27191193	27191194	chunk0034_74_1	23.42413	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	27190593	27191413	-107895209	+	L2	LINE	L2	2102	3012	-407	6
730	chr11	25928183	25928184	chunk0034_8_1	78.093	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	25928161	25928412	-109158210	-	LTR80B	LTR	ERVL	-316	268	1	6
731	chr11	42552976	42552977	chunk0035_114_1	11.8271	AR_DHT_Control	chr11	42552725	42553123	-92533499	+	MLT2C1	LTR	ERVL	1	397	0	6
732	chr11	42951503	42951504	chunk0035_146_1	15.7	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	42951459	42951597	-92135025	+	MLT1H	LTR	ERVL-MaLR	411	549	0	6
733	chr11	45147146	45147147	chunk0035_220_1	4.4788	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	45147135	45147171	-89939451	+	(CTCCTCG)n	Simple_repeat	Simple_repeat	1	37	0	6
734	chr11	45160517	45160518	chunk0035_221_1	6.57411	AR_DHT_Control	chr11	45160293	45160636	-89925986	-	L1ME3G	LINE	L1	-14	910	583	6
735	chr11	46268131	46268132	chunk0035_249_1	125.41174	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	46267812	46268242	-88818380	+	L1ME4b	LINE	L1	224	683	-209	6
736	chr11	40659661	40659662	chunk0035_31_1	8.24382	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	40658852	40660449	-94426173	+	MER52A	LTR	ERV1	1	1755	0	6
737	chr11	47553225	47553226	chunk0035_327_1	8.08101	AR_DHT_Control	chr11	47553220	47553291	-87533331	+	(GCGCCGA)n	Simple_repeat	Simple_repeat	1	77	0	6
738	chr11	48993624	48993625	chunk0035_355_1	23.4743	AR_DHT_Control	chr11	48993405	48993674	-86092948	-	Tigger3a	DNA	TcMar-Tigger	-50	298	22	6
739	chr11	49165353	49165354	chunk0035_361_1	85.58788	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	49164854	49165393	-85921229	+	L2a	LINE	L2	2791	3426	0	6
740	chr11	49195337	49195338	chunk0035_366_1	6.00544	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	49194739	49195873	-85890749	+	L1M5	LINE	L1	2286	3454	-2692	6
741	chr11	49196400	49196401	chunk0035_368_1	5.37017	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	49196315	49196900	-85889722	+	L1M5	LINE	L1	3474	4152	-1994	6
742	chr11	56180623	56180624	chunk0035_387_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	56180319	56181080	-78905542	+	L1MDa	LINE	L1	225	1068	-5565	6
743	chr11	40935919	40935920	chunk0035_40_1	29.56969	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	40935818	40935959	-94150663	+	MIRc	SINE	MIR	39	203	-65	6
744	chr11	56801731	56801732	chunk0035_407_1	14.6324	AR_DHT_Control	chr11	56801707	56801782	-78284840	-	L2a	LINE	L2	-5	3421	3342	6
745	chr11	57121667	57121668	chunk0035_420_1	7.38582	AR_DHT_Control	chr11	57121416	57122135	-77964487	+	MER21C	LTR	ERVL	222	936	-2	6
746	chr11	41545522	41545523	chunk0035_64_1	8.15319	AR_DHT_Control	chr11	41544729	41550920	-93535702	+	L1PA6	LINE	L1	1	6152	-2	6
747	chr11	39944294	39944295	chunk0035_7_1	5.59693	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	39943917	39944864	-95141758	-	L1MA8	LINE	L1	-4650	2915	2008	6
748	chr11	39984808	39984809	chunk0035_8_1	55.706	AR_DHT_Control	chr11	39984014	39990193	-95096429	+	L1PA5	LINE	L1	4	6153	-1	6
749	chr11	42025627	42025628	chunk0035_87_1	81.3901	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	42025514	42025905	-93060717	+	L1MA9	LINE	L1	5784	6175	-137	6
750	chr11	62050706	62050707	chunk0036_141_1	88.95969	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	62050223	62052820	-73033802	-	HERVK3-int	LTR	ERVK	-2	7200	4595	6
751	chr11	62621460	62621461	chunk0036_177_1	5.58563	AR_DHT_Control	chr11	62621149	62621731	-72464891	-	L2a	LINE	L2	0	3426	2828	6
752	chr11	62939387	62939388	chunk0036_189_1	43.5156	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	62939236	62939458	-72147164	-	L1ME5	LINE	L1	-8	6186	5955	6
753	chr11	63132677	63132678	chunk0036_191_1	15.2872	AR_DHT_Control	chr11	63130814	63133447	-71953175	-	L1PA7	LINE	L1	-3536	2610	5	6
754	chr11	64378440	64378441	chunk0036_242_1	59.55741	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	64378303	64378594	-70708028	-	L1ME4a	LINE	L1	-298	5826	5536	6
755	chr11	64561399	64561400	chunk0036_252_1	29.51156	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	64561287	64561445	-70525177	-	MIR	SINE	MIR	-75	187	25	6
756	chr11	65429165	65429166	chunk0036_285_1	4.67596	AR_DHT_Control	chr11	65428987	65429477	-69657145	-	L1ME4a	LINE	L1	-251	5873	5367	6
757	chr11	65560201	65560202	chunk0036_293_1	7.06178	AR_DHT_Control	chr11	65559963	65560213	-69526409	-	L2c	LINE	L2	-4	3383	3093	6
758	chr11	66694938	66694939	chunk0036_334_1	5.03761	AR_DHT_Control	chr11	66694711	66694985	-68391637	+	LTR41C	LTR	ERVL	1	271	-430	6
759	chr11	66782784	66782785	chunk0036_343_1	7.22694	AR_DHT_Control	chr11	66782365	66782786	-68303836	-	L1MEf	LINE	L1	-5938	462	34	6
760	chr11	66877597	66877598	chunk0036_350_1	7.97514	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	66877564	66877808	-68208814	+	L1ME4a	LINE	L1	5614	5887	-237	6
761	chr11	66887171	66887172	chunk0036_351_1	9.25272	AR_DHT_Control	chr11	66887057	66887739	-68198883	+	HAL1	LINE	L1	595	1342	-1165	6
762	chr11	58750357	58750358	chunk0036_36_1	20.6373	AR_DHT_Control	chr11	58749636	58752103	-76334519	+	L1PA6	LINE	L1	1	2466	-3680	6
763	chr11	67649763	67649764	chunk0036_386_1	8.3176	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	67649523	67649951	-67436671	+	(GT)n	Simple_repeat	Simple_repeat	1	431	0	6
764	chr11	58989264	58989265	chunk0036_42_1	21.2204	AR_DHT_Control	chr11	58983951	58990073	-76096549	-	L1PA6	LINE	L1	-4	6150	5	6
765	chr11	68498544	68498545	chunk0036_437_1	6.16169	AR_DHT_Control	chr11	68498492	68499136	-66587486	-	L1ME3A	LINE	L1	-151	6022	5292	6
766	chr11	68673891	68673892	chunk0036_454_1	5.99997	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	68673622	68673998	-66412624	+	MLT1G1	LTR	ERVL-MaLR	138	549	0	6
767	chr11	59154787	59154788	chunk0036_56_1	18.246	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr11	59154704	59155134	-75931488	+	LTR47A2	LTR	ERVL	1	432	0	6
768	chr11	59156203	59156204	chunk0036_58_1	23.18458	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	59155881	59156304	-75930318	+	Tigger17a	DNA	TcMar-Tigger	237	654	0	6
769	chr11	59617948	59617949	chunk0036_63_1	58.5375	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	59617826	59618458	-75468164	+	L1MC5a	LINE	L1	1995	2633	-144	6
770	chr11	59762055	59762056	chunk0036_68_1	6.8205	AR_DHT_Control	chr11	59761825	59762162	-75324460	-	L1MD3	LINE	L1	0	7995	7658	6
771	chr11	60893585	60893586	chunk0036_95_1	193.4837	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	60893556	60893672	-74192950	-	Tigger1	DNA	TcMar-Tigger	0	2418	2310	6
772	chr11	60913092	60913093	chunk0036_96_1	7.10145	AR_DHT_Control	chr11	60912641	60913600	-74173022	-	LTR1D	LTR	ERV1	0	975	3	6
773	chr11	61034314	61034315	chunk0036_99_1	4.9245	AR_DHT_Control	chr11	61034086	61034391	-74052231	+	LTR84b	LTR	ERVL	6	333	-428	6
774	chr11	72208395	72208396	chunk0037_106_1	10.5451	AR_DHT_Control	chr11	72208280	72209123	-62877499	+	L1MB2	LINE	L1	703	1549	-5104	6
775	chr11	72381461	72381462	chunk0037_113_1	5.40567	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	72380978	72383242	-62703380	+	L1M3e	LINE	L1	460	3035	-4531	6
776	chr11	72442121	72442122	chunk0037_115_1	10.1791	AR_DHT_Control	chr11	72441734	72442147	-62644475	-	MLT1E1A	LTR	ERVL-MaLR	-188	492	1	6
777	chr11	74035480	74035481	chunk0037_175_1	100.3162	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	74035294	74035578	-61051044	+	L2c	LINE	L2	3048	3391	-35	6
778	chr11	69223216	69223217	chunk0037_19_1	10.5451	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	69222824	69224833	-65861789	-	L1MD1	LINE	L1	-5	6628	4555	6
779	chr11	74325547	74325548	chunk0037_197_1	4.39832	AR_DHT_Control	chr11	74325419	74325569	-60761053	+	L2-1_AMi	LINE	L2	380	530	-705	6
780	chr11	74532671	74532672	chunk0037_207_1	8.27376	AR_DHT_Control	chr11	74532105	74532914	-60553708	-	L1MEc	LINE	L1	-5174	1226	339	6
781	chr11	74853231	74853232	chunk0037_220_1	6.54253	AR_DHT_Control	chr11	74853016	74853300	-60233322	-	L2a	LINE	L2	0	3426	3067	6
782	chr11	74956668	74956669	chunk0037_225_1	7.09019	AR_DHT_Control	chr11	74955938	74957190	-60129432	+	L2a	LINE	L2	2006	3421	-5	6
783	chr11	74963865	74963866	chunk0037_226_1	5.33775	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	74963784	74963873	-60122749	-	L3	LINE	CR1	-1302	2797	2710	6
784	chr11	74964160	74964161	chunk0037_227_1	5.44741	AR_DHT_Control	chr11	74964080	74964279	-60122343	-	L1MC	LINE	L1	-384	5789	5573	6
785	chr11	74984210	74984211	chunk0037_230_1	140.1802	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;Merged_Lncap_AR_Veh	chr11	74984155	74984558	-60102064	+	LTR40b	LTR	ERVL	2	462	0	6
786	chr11	75516706	75516707	chunk0037_255_1	6.29759	AR_DHT_Control	chr11	75516669	75516878	-59569744	-	MIR	SINE	MIR	-7	255	35	6
787	chr11	75692765	75692766	chunk0037_268_1	82.94	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	75692411	75693101	-59393521	-	L1MD2	LINE	L1	-227	6132	5429	6
788	chr11	75715181	75715182	chunk0037_270_1	53.9951	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	75715090	75715285	-59371337	+	L1MC	LINE	L1	5201	5403	-840	6
789	chr11	76963307	76963308	chunk0037_323_1	25.7533	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	76962900	76963486	-58123136	+	MER61F	LTR	ERV1	1	639	-37	6
790	chr11	77316924	77316925	chunk0037_337_1	4.83664	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	77316841	77317009	-57769613	+	Tigger10	DNA	TcMar-Tigger	641	815	-1029	6
791	chr11	77578753	77578754	chunk0037_352_1	6.81252	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	77578210	77579591	-57507031	+	MER4-int	LTR	ERV1	986	2537	-4061	6
792	chr11	78802281	78802282	chunk0037_388_1	33.7051	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	78802239	78802435	-56284187	-	MIR	SINE	MIR	-17	245	46	6
793	chr11	79866729	79866730	chunk0037_414_1	37.132	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	79864413	79870856	-55215766	+	L1PA7	LINE	L1	5	6469	0	6
794	chr11	80343922	80343923	chunk0037_438_1	6.35715	AR_DHT_Control	chr11	80343897	80343969	-54742653	-	MIRb	SINE	MIR	-120	148	79	6
795	chr11	80588091	80588092	chunk0037_448_1	52.2138	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	80587993	80588349	-54498273	-	L4_C_Mam	LINE	RTE-X	-256	4882	4533	6
796	chr11	68857738	68857739	chunk0037_5_1	6.48643	AR_DHT_Control	chr11	68857309	68857788	-66228834	-	L1ME4b	LINE	L1	-61	831	315	6
797	chr11	83923306	83923307	chunk0038_116_1	4.59852	AR_DHT_Control	chr11	83923288	83923472	-51163150	-	MIRc	SINE	MIR	-64	204	20	7
798	chr11	80899592	80899593	chunk0038_13_1	41.2391	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	80898985	80900084	-54186538	-	L1MB8	LINE	L1	-6	6172	5066	6
799	chr11	85878549	85878550	chunk0038_185_1	41.5937	AR_DHT_Control	chr11	85878098	85879445	-49207177	-	L1MD1	LINE	L1	0	6633	5235	7
800	chr11	86080605	86080606	chunk0038_192_1	90.8246	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	86080487	86081001	-49005621	-	L1MC1	LINE	L1	-673	5835	5333	7
801	chr11	86198519	86198520	chunk0038_197_1	106.1866	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	86198166	86199206	-48887416	+	L1MC1	LINE	L1	5323	6333	0	7
802	chr11	86248984	86248985	chunk0038_204_1	6.29634	AR_DHT_Control	chr11	86248736	86249004	-48837618	+	AluJb	SINE	Alu	1	288	-24	7
803	chr11	86962342	86962343	chunk0038_225_1	10.1791	AR_DHT_Control	chr11	86962070	86962519	-48124103	+	MLT2F	LTR	ERVL	6	491	-172	7
804	chr11	87036963	87036964	chunk0038_234_1	9.63948	AR_DHT_Control	chr11	87036792	87036990	-48049632	+	L2a	LINE	L2	3216	3425	-1	7
805	chr11	81119488	81119489	chunk0038_24_1	12.95178	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	81119397	81119575	-53967047	+	AmnSINE1	SINE	5S-Deu-L2	321	505	-70	6
806	chr11	89649146	89649147	chunk0038_273_1	9.00107	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	89648500	89649235	-45437387	-	L1M5	LINE	L1	-1994	4152	3455	7
807	chr11	90074268	90074269	chunk0038_283_1	10.1162	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	90074189	90074337	-45012285	+	AluSc	SINE	Alu	155	302	-7	7
808	chr11	90103785	90103786	chunk0038_285_1	12.35885	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	90103565	90104186	-44982436	+	L1MC	LINE	L1	5157	5799	-380	7
809	chr11	90120009	90120010	chunk0038_288_1	6.20286	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	90119785	90120096	-44966526	-	L1ME1	LINE	L1	-153	6199	5892	7
810	chr11	92942807	92942808	chunk0038_347_1	4.77556	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	92942782	92942842	-42143780	+	GA-rich	Low_complexity	Low_complexity	1	61	0	7
811	chr11	93257738	93257739	chunk0038_360_1	70.0373	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	93257512	93257779	-41828843	-	ORSL	DNA	hAT-Tip100	0	275	1	7
812	chr11	93359575	93359576	chunk0038_368_1	17.297	AR_DHT_Control	chr11	93359402	93361943	-41724679	+	L1MDa	LINE	L1	16	2723	-3814	7
813	chr11	93648185	93648186	chunk0038_397_1	16.6995	AR_DHT_Control	chr11	93648131	93648234	-41438388	-	Charlie17a	DNA	hAT-Charlie	-110	107	2	7
814	chr11	82235215	82235216	chunk0038_42_1	65.2142	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	82235172	82235299	-52851323	-	MIRb	SINE	MIR	-24	244	107	6
815	chr11	82682518	82682519	chunk0038_52_1	15.3991	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	82682499	82682531	-52404091	+	(GA)n	Simple_repeat	Simple_repeat	1	32	0	6
816	chr11	83052363	83052364	chunk0038_69_1	6.6351	AR_DHT_Control	chr11	83052160	83052402	-52034220	-	MIRc	SINE	MIR	-2	266	9	6
817	chr11	97854256	97854257	chunk0039_117_1	10.4825	AR_DHT_Control	chr11	97853946	97854652	-37231970	+	MER67C	LTR	ERV1	9	710	-1	7
818	chr11	97982519	97982520	chunk0039_119_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	97981975	97982839	-37103783	+	LTR27D	LTR	ERV1	3	1077	0	7
819	chr11	99079611	99079612	chunk0039_163_1	4.60172	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	99079610	99080056	-36006566	+	L2c	LINE	L2	2911	3369	-18	7
820	chr11	100435023	100435024	chunk0039_179_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	100434947	100435373	-34651249	+	LTR18B	LTR	ERVL	81	614	0	7
821	chr11	101227539	101227540	chunk0039_217_1	5.18995	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	101226817	101227595	-33859027	+	L1MEd	LINE	L1	562	1398	-5688	7
822	chr11	101511372	101511373	chunk0039_224_1	8.84892	AR_DHT_Control	chr11	101511325	101511430	-33575192	+	L2b	LINE	L2	3263	3375	0	7
823	chr11	101599031	101599032	chunk0039_226_1	4.74037	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	101598935	101599442	-33487180	+	L1M5	LINE	L1	3217	3740	-2406	7
824	chr11	101663365	101663366	chunk0039_227_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	101663241	101666127	-33420495	-	L1MA2	LINE	L1	-4219	3346	17	7
825	chr11	102214697	102214698	chunk0039_254_1	21.6471	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	102214658	102214703	-32871919	+	(ATATTTT)n	Simple_repeat	Simple_repeat	1	47	0	7
826	chr11	103336297	103336298	chunk0039_312_1	19.04782	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	103336153	103336918	-31749704	-	L1MA4	LINE	L1	-5	6295	5621	7
827	chr11	106172539	106172540	chunk0039_370_1	7.91029	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	106172244	106172674	-28913948	+	LTR56	LTR	ERV1	7	437	0	7
828	chr11	107500955	107500956	chunk0039_410_1	5.70484	AR_DHT_Control	chr11	107500110	107501542	-27585080	+	L1ME1	LINE	L1	4697	6169	-10	7
829	chr11	107582585	107582586	chunk0039_415_1	7.22694	AR_DHT_Control	chr11	107582516	107582621	-27504001	-	MER5A	DNA	hAT-Charlie	-2	187	86	7
830	chr11	108341097	108341098	chunk0039_446_1	9.28589	AR_DHT_Control	chr11	108341005	108341550	-26745072	+	L2a	LINE	L2	2828	3426	0	7
831	chr11	108370898	108370899	chunk0039_450_1	30.2667	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	108370879	108371225	-26715397	-	MER99	DNA	hAT?	0	831	456	7
832	chr11	96403604	96403605	chunk0039_70_1	35.13014	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	96403323	96404167	-38682455	+	L1MB7	LINE	L1	5318	6173	-11	7
833	chr11	96878126	96878127	chunk0039_75_1	4.55016	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	96877292	96878981	-38207641	-	MER52A	LTR	ERV1	0	1755	1	7
834	chr11	97060020	97060021	chunk0039_77_1	6.0927	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	97059668	97061761	-38024861	+	L1MA4A	LINE	L1	893	2979	-4587	7
835	chr11	97060569	97060570	chunk0039_78_1	6.04605	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	97059668	97061761	-38024861	+	L1MA4A	LINE	L1	893	2979	-4587	7
836	chr11	112307784	112307785	chunk0040_124_1	10.2576	AR_DHT_Control	chr11	112307713	112307948	-22778674	+	MIRb	SINE	MIR	15	256	-6	7
837	chr11	112318670	112318671	chunk0040_126_1	7.94333	AR_DHT_Control	chr11	112318379	112318940	-22767682	+	MER89	LTR	ERV1	1	557	-2	7
838	chr11	108736319	108736320	chunk0040_13_1	7.91804	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	108736291	108736327	-26350295	+	(GT)n	Simple_repeat	Simple_repeat	1	38	0	7
839	chr11	113849551	113849552	chunk0040_162_1	6.26854	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	113847829	113849952	-21236670	+	MER21-int	LTR	ERVL	919	3085	-1106	7
840	chr11	114001711	114001712	chunk0040_173_1	20.97364	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	114001327	114001773	-21084849	+	LTR16B2	LTR	ERVL	1	457	-5	7
841	chr11	114662633	114662634	chunk0040_240_1	4.96282	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	114661966	114663286	-20423336	+	L1M1	LINE	L1	16	1446	-6119	7
842	chr11	115830811	115830812	chunk0040_254_1	8.08101	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	115830693	115832173	-19254449	+	(CTGTACA)n	Simple_repeat	Simple_repeat	1	1739	0	7
843	chr11	116177946	116177947	chunk0040_265_1	25.3616	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	116177887	116178382	-18908240	+	MLT2B4	LTR	ERVL	2	513	-43	7
844	chr11	116808425	116808426	chunk0040_276_1	58.8367	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	116808360	116808566	-18278056	-	MIRb	SINE	MIR	-21	247	10	7
845	chr11	116944279	116944280	chunk0040_285_1	5.91555	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	116944177	116944865	-18141757	+	MER77B	LTR	ERVL	6	700	0	7
846	chr11	110295316	110295317	chunk0040_30_1	5.79085	AR_DHT_Control	chr11	110295308	110295330	-24791292	+	(A)n	Simple_repeat	Simple_repeat	1	22	0	7
847	chr11	117232767	117232768	chunk0040_305_1	5.69103	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	117232757	117232873	-17853749	+	G-rich	Low_complexity	Low_complexity	1	116	0	7
848	chr11	118530386	118530387	chunk0040_345_1	8.15319	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	118530368	118530520	-16556102	+	MIRb	SINE	MIR	8	186	-82	7
849	chr11	110445659	110445660	chunk0040_35_1	15.00252	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	110445644	110445852	-24640770	+	MIR	SINE	MIR	36	230	0	7
850	chr11	121049066	121049067	chunk0040_408_1	17.03319	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	121048825	121049150	-14037472	+	L2c	LINE	L2	3030	3387	0	7
851	chr11	121300501	121300502	chunk0040_424_1	262.3957	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	121300075	121301621	-13785001	+	L1M4	LINE	L1	2	1664	-5853	7
852	chr11	121688725	121688726	chunk0040_453_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	121688671	121688876	-13397746	+	Charlie5	DNA	hAT-Charlie	2419	2624	0	7
853	chr11	122461978	122461979	chunk0040_455_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	122461224	122468126	-12618496	+	L1MA4A	LINE	L1	718	7702	-20	7
854	chr11	111237405	111237406	chunk0040_64_1	81.0371	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	111237099	111237629	-23848993	+	L1ME4b	LINE	L1	244	762	-130	7
855	chr11	111253299	111253300	chunk0040_66_1	24.31702	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	111253293	111253362	-23833260	+	Charlie17a	DNA	hAT-Charlie	130	198	-19	7
856	chr11	108621085	108621086	chunk0040_8_1	6.6833	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	108621047	108621222	-26465400	-	Charlie29a	DNA	hAT-Charlie	-337	382	193	7
857	chr11	111446654	111446655	chunk0040_85_1	6.92693	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	111446624	111446655	-23639967	+	(AC)n	Simple_repeat	Simple_repeat	1	31	0	7
858	chr12	53784	53785	chunk0041_1_1	6.78837	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	53592	53867	-133221442	+	L3	LINE	CR1	3804	4098	-1	7
859	chr11	124823871	124823872	chunk0041_104_1	7.58612	AR_DHT_Control	chr11	124823775	124824459	-10262163	+	MER50	LTR	ERV1	1	718	-16	7
860	chr11	124904025	124904026	chunk0041_111_1	11.7357	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	124903760	124904613	-10182009	-	L1M5	LINE	L1	-1881	4265	3370	7
861	chr11	124968102	124968103	chunk0041_117_1	51.0623	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	124962648	124968793	-10117829	-	L1PA6	LINE	L1	0	6327	174	7
862	chr11	124984330	124984331	chunk0041_118_1	4.59852	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	124981920	124984944	-10101678	-	L1PA15	LINE	L1	-3629	3137	13	7
863	chr11	125301052	125301053	chunk0041_139_1	95.6239	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	125300894	125301055	-9785567	+	MIR3	SINE	MIR	5	166	-42	7
864	chr11	125329583	125329584	chunk0041_141_1	18.63212	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	125329487	125329861	-9756761	-	L2c	LINE	L2	-56	3331	2919	7
865	chr12	415057	415058	chunk0041_15_1	35.188	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	415054	415093	-132860216	+	MER21C	LTR	ERVL	228	266	-672	7
866	chr11	127412612	127412613	chunk0041_217_1	5.48709	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	127411226	127413202	-7673420	-	MER52D	LTR	ERV1	-24	2099	8	7
867	chr11	127688774	127688775	chunk0041_221_1	23.8404	AR_DHT_Control	chr11	127688397	127690145	-7396477	-	L1MA10	LINE	L1	-2	6332	4600	7
868	chr11	129410598	129410599	chunk0041_285_1	7.24914	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	129410547	129410691	-5675931	-	HAL1ME	LINE	L1	-1680	785	646	7
869	chr11	129453444	129453445	chunk0041_287_1	73.616	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	129453371	129453556	-5633066	+	Tigger19a	DNA	TcMar-Tigger	118	323	0	7
870	chr11	131703489	131703490	chunk0041_376_1	10.0841	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	131703367	131703527	-3383095	+	L1MC5	LINE	L1	5027	5189	-957	7
871	chr11	133901961	133901962	chunk0041_408_1	5.73469	AR_DHT_Control	chr11	133901788	133902587	-1184035	+	(CA)n	Simple_repeat	Simple_repeat	1	866	0	7
872	chr11	134407087	134407088	chunk0041_432_1	7.3267	AR_DHT_Control	chr11	134406992	134407114	-679508	+	MER3	DNA	hAT-Charlie	6	127	-82	7
873	chr11	134565616	134565617	chunk0041_441_1	17.0716	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr11	134565510	134565750	-520872	+	(ATGATG)n	Simple_repeat	Simple_repeat	3	243	0	7
874	chr11	134592412	134592413	chunk0041_442_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	134592376	134592872	-493750	-	LTR53B	LTR	ERVL	0	533	1	7
875	chr11	135022077	135022078	chunk0041_451_1	5.40815	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	135021793	135022296	-64326	-	LTR53	LTR	ERVL	-1	518	2	7
876	chr11	123487223	123487224	chunk0041_64_1	37.0258	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	123487089	123487280	-11599342	-	MIRb	SINE	MIR	-16	252	59	7
877	chr11	123678049	123678050	chunk0041_70_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	123678018	123678559	-11408063	+	LTR33C	LTR	ERVL	14	569	-60	7
878	chr12	3851961	3851962	chunk0042_146_1	78.56617	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	3851135	3857278	-129418031	+	L1PA6	LINE	L1	174	6316	-11	7
879	chr12	5348259	5348260	chunk0042_196_1	59.4143	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	5348181	5348277	-127927032	+	MIRc	SINE	MIR	136	254	-14	7
880	chr12	1332497	1332498	chunk0042_21_1	10.1791	AR_DHT_Control	chr12	1332000	1332698	-131942611	-	HAL1ME	LINE	L1	-1086	1379	640	7
881	chr12	6334964	6334965	chunk0042_240_1	18.3999	AR_DHT_Control	chr12	6334943	6335056	-126940253	+	L1ME3A	LINE	L1	6048	6165	-8	7
882	chr12	6430970	6430971	chunk0042_249_1	228.0231	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	6430483	6431057	-126844252	+	L1ME3G	LINE	L1	91	697	-227	7
883	chr12	1396662	1396663	chunk0042_25_1	5.6425	AR_DHT_Control	chr12	1396658	1397057	-131878252	+	L1MEd	LINE	L1	161	566	-6537	7
884	chr12	6497405	6497406	chunk0042_252_1	14.5084	AR_DHT_Control	chr12	6497281	6497611	-126777698	-	L1PA10	LINE	L1	-1	6167	5818	7
885	chr12	6689208	6689209	chunk0042_260_1	15.25344	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	6689167	6689214	-126586095	+	GA-rich	Low_complexity	Low_complexity	1	49	0	7
886	chr12	9673722	9673723	chunk0042_326_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	9672445	9674544	-123600765	-	L1PA10	LINE	L1	-4392	2091	10	7
887	chr12	9801746	9801747	chunk0042_335_1	7.42871	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	9800835	9801985	-123473324	-	L1PA8	LINE	L1	-5	6167	5016	7
888	chr12	9883382	9883383	chunk0042_339_1	6.73207	AR_DHT_Control	chr12	9883109	9883444	-123391865	-	L4_A_Mam	LINE	RTE-X	-195	4795	4422	7
889	chr12	10364673	10364674	chunk0042_362_1	4.89968	AR_DHT_Control	chr12	10364665	10364697	-122910612	+	(TGAGAG)n	Simple_repeat	Simple_repeat	1	32	0	7
890	chr12	10426774	10426775	chunk0042_368_1	11.1999	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	10426727	10426853	-122848456	-	MLT1A1	LTR	ERVL-MaLR	-2	406	281	7
891	chr12	11615733	11615734	chunk0042_405_1	6.48643	AR_DHT_Control	chr12	11615339	11616100	-121659209	+	MER31-int	LTR	ERV1	320	1008	-7199	7
892	chr12	11623612	11623613	chunk0042_407_1	129.5784	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	11623535	11623744	-121651565	+	MER31-int	LTR	ERV1	5896	6330	-1	7
893	chr12	12405968	12405969	chunk0042_445_1	109.1046	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	12405843	12406172	-120869137	-	MLT1N2	LTR	ERVL-MaLR	-42	520	178	7
894	chr12	12489199	12489200	chunk0042_455_1	5.66005	AR_DHT_Control	chr12	12489170	12489347	-120785962	-	MamRTE1	LINE	RTE-BovB	-1270	2542	2364	7
895	chr12	1871295	1871296	chunk0042_55_1	9.22214	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	1871032	1871703	-131403606	+	(GT)n	Simple_repeat	Simple_repeat	1	702	0	7
896	chr12	1980045	1980046	chunk0042_60_1	6.54253	AR_DHT_Control	chr12	1979848	1980308	-131295001	+	L1ME3	LINE	L1	5363	5841	-321	7
897	chr12	2662685	2662686	chunk0042_91_1	88.7109	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr12	2662271	2663239	-130612070	+	L1ME3C	LINE	L1	4225	5319	-895	7
898	chr12	2764585	2764586	chunk0042_94_1	26.0553	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	2764571	2764766	-130510543	-	MIR	SINE	MIR	-48	214	12	7
899	chr12	17194364	17194365	chunk0043_174_1	208.00604	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	17194337	17195702	-116079607	+	MLT1A1-int	LTR	ERVL-MaLR	407	1734	-1	8
900	chr12	17322533	17322534	chunk0043_177_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	17317968	17323002	-115952307	-	L1PB1	LINE	L1	-968	5894	634	8
901	chr12	17600973	17600974	chunk0043_179_1	26.77	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	17600316	17602252	-115673057	-	L1M4b	LINE	L1	-4880	1987	11	8
902	chr12	17949900	17949901	chunk0043_182_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	17949165	17952069	-115323240	+	L1MA9	LINE	L1	1	3007	-4161	8
903	chr12	18953754	18953755	chunk0043_189_1	56.3938	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	18953738	18953881	-114321428	+	L3	LINE	CR1	2613	2757	-1342	8
904	chr12	18998428	18998429	chunk0043_190_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	18998116	18998450	-114276859	-	L1MEf	LINE	L1	-6014	386	35	8
905	chr12	19564398	19564399	chunk0043_210_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	19563303	19565281	-113710028	-	L1PREC2	LINE	L1	0	8155	6162	8
906	chr12	19700902	19700903	chunk0043_215_1	3.92063	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	19700213	19706896	-113568413	+	L1PA15	LINE	L1	13	6757	-28	8
907	chr12	19913179	19913180	chunk0043_221_1	66.57788	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	19913119	19913462	-113361847	+	L2b	LINE	L2	2934	3318	-108	8
908	chr12	20199885	20199886	chunk0043_240_1	5.03921	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	20199466	20200558	-113074751	-	L1PB3	LINE	L1	-3868	3047	1844	8
909	chr12	20305268	20305269	chunk0043_245_1	5.40815	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	20304248	20308522	-112966787	+	L1M2a	LINE	L1	401	4607	-2952	8
910	chr12	20735357	20735358	chunk0043_265_1	5.89947	AR_DHT_Control	chr12	20735306	20735469	-112539840	+	MIR3	SINE	MIR	38	198	-10	8
911	chr12	20968656	20968657	chunk0043_276_1	30.27458	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	20968283	20969097	-112306212	-	MER4-int	LTR	ERV1	-169	2316	1357	8
912	chr12	21061638	21061639	chunk0043_279_1	12.9925	AR_DHT_Control	chr12	21058644	21063106	-112212203	-	L1PB4	LINE	L1	-475	6450	1965	8
913	chr12	22050299	22050300	chunk0043_300_1	14.9872	AR_DHT_Control	chr12	22050196	22050406	-111224903	+	MIR	SINE	MIR	19	235	-27	8
914	chr12	22209644	22209645	chunk0043_312_1	12.13626	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	22209631	22209717	-111065592	+	L2a	LINE	L2	3079	3165	-261	8
915	chr12	23375707	23375708	chunk0043_359_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	23375154	23378011	-109897298	+	L1PA17	LINE	L1	345	3015	-3904	8
916	chr12	24551569	24551570	chunk0043_377_1	5.69226	AR_DHT_Control	chr12	24551532	24551627	-108723682	-	L2a	LINE	L2	-2	3424	3318	8
917	chr12	24969407	24969408	chunk0043_382_1	8.52761	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	24968689	24969575	-108305734	-	LTR37-int	LTR	ERV1	-2947	1113	231	8
918	chr12	25437613	25437614	chunk0043_399_1	5.37069	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	25437597	25439433	-107835876	-	ERV3-16A3_I-int	LTR	ERVL	-1127	4540	2731	8
919	chr12	13376346	13376347	chunk0043_41_1	60.12363	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	13376267	13376410	-119898899	-	MIRc	SINE	MIR	-48	160	13	7
920	chr12	25866991	25866992	chunk0043_421_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	25866378	25867827	-107407482	+	L1MB8	LINE	L1	74	1578	-5055	8
921	chr12	25968754	25968755	chunk0043_427_1	55.28463	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	25968700	25969214	-107306095	-	L2a	LINE	L2	-62	3364	2818	8
922	chr12	26038635	26038636	chunk0043_430_1	6.94032	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	26038608	26038656	-107236653	+	(AC)n	Simple_repeat	Simple_repeat	1	48	0	8
923	chr12	26654747	26654748	chunk0043_447_1	5.69226	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	26654630	26655046	-106620263	+	MLT1F1	LTR	ERVL-MaLR	126	569	0	8
924	chr12	14255767	14255768	chunk0043_66_1	18.85407	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	14255680	14256106	-119019203	-	L2b	LINE	L2	0	3426	2980	8
925	chr12	14442462	14442463	chunk0043_79_1	18.24121	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	14442456	14442720	-118832589	+	Merlin1_HS	DNA	Merlin	905	1172	-3	8
926	chr12	29053805	29053806	chunk0044_115_1	87.242	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	29053746	29054171	-104221138	+	L1ME2	LINE	L1	5654	6157	-7	8
927	chr12	29425725	29425726	chunk0044_137_1	37.2083	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	29425516	29425786	-103849523	+	MIR	SINE	MIR	6	262	0	8
928	chr12	29840720	29840721	chunk0044_157_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	29837185	29841634	-103433675	-	L1MA3	LINE	L1	-2941	4624	72	8
929	chr12	27132082	27132083	chunk0044_17_1	21.42192	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	27132015	27132194	-106143115	-	AluJb	SINE	Alu	-12	300	123	8
930	chr12	30088473	30088474	chunk0044_175_1	17.43983	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	30088171	30090409	-103184900	-	L1ME2	LINE	L1	-116	6048	3739	8
931	chr12	30313624	30313625	chunk0044_182_1	10.2986	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	30309930	30314563	-102960746	+	L1PA10	LINE	L1	1	5997	-1584	8
932	chr12	30437290	30437291	chunk0044_188_1	156.8622	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr12	30437252	30437590	-102837719	+	LTR82B	LTR	ERVL	3	394	-436	8
933	chr12	30531933	30531934	chunk0044_192_1	4.06817	AR_DHT_Control	chr12	30531903	30531939	-102743370	+	(TGAGAG)n	Simple_repeat	Simple_repeat	1	40	0	8
934	chr12	30807585	30807586	chunk0044_203_1	7.97574	AR_DHT_Control	chr12	30806990	30807917	-102467392	+	L1M3f	LINE	L1	1247	2187	-4378	8
935	chr12	30851737	30851738	chunk0044_207_1	21.2512	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	30850964	30851917	-102423392	+	LTR13_	LTR	ERVK	1	954	0	8
936	chr12	30885549	30885550	chunk0044_209_1	5.9729	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	30885314	30887511	-102387798	+	L1M2a	LINE	L1	634	2842	-4326	8
937	chr12	31357839	31357840	chunk0044_221_1	18.03424	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	31357770	31357884	-101917425	-	L1ME4a	LINE	L1	-265	5859	5741	8
938	chr12	31472024	31472025	chunk0044_231_1	6.48643	AR_DHT_Control	chr12	31471612	31472303	-101803006	+	MER21-int	LTR	ERVL	505	1228	-2963	8
939	chr12	31518333	31518334	chunk0044_234_1	24.5771	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	31518254	31518419	-101756890	-	MIR3	SINE	MIR	-11	197	31	8
940	chr12	31588099	31588100	chunk0044_235_1	6.62784	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	31587846	31588394	-101686915	+	L2a	LINE	L2	2706	3264	-162	8
941	chr12	27239404	27239405	chunk0044_25_1	19.26194	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	27239315	27239506	-106035803	-	L1M5	LINE	L1	-2763	3383	3182	8
942	chr12	27279990	27279991	chunk0044_27_1	57.032	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	27279927	27280106	-105995203	+	MIR	SINE	MIR	70	262	0	8
943	chr12	32756050	32756051	chunk0044_291_1	6.35715	AR_DHT_Control	chr12	32756018	32756184	-100519125	+	MIR	SINE	MIR	58	229	-39	8
944	chr12	33558943	33558944	chunk0044_311_1	7.90506	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	33558510	33559007	-99716302	-	L4_B_Mam	LINE	RTE-X	-628	4313	3783	8
945	chr12	33780753	33780754	chunk0044_318_1	33.28634	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	33779900	33780880	-99494429	-	L1MC1	LINE	L1	-9	6324	5339	8
946	chr12	34048633	34048634	chunk0044_320_1	11.5684	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	34048041	34048661	-99226648	+	LTR14B	LTR	ERVK	17	608	0	8
947	chr12	34253890	34253891	chunk0044_326_1	35.7156	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	34253830	34253984	-99021325	-	L1MB2	LINE	L1	-3	7128	6973	8
948	chr12	27366743	27366744	chunk0044_33_1	7.5995	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	27366634	27366917	-105908392	+	L1ME4c	LINE	L1	313	620	-210	8
949	chr12	38175622	38175623	chunk0044_330_1	9.99437	AR_DHT_Control	chr12	38175583	38175635	-95099674	+	(ACACAC)n	Simple_repeat	Simple_repeat	1	52	0	8
950	chr12	27451587	27451588	chunk0044_37_1	4.96282	AR_DHT_Control	chr12	27451424	27451651	-105823658	-	Tigger17a	DNA	TcMar-Tigger	-115	539	290	8
951	chr12	39606855	39606856	chunk0044_371_1	12.1906	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	39606855	39606997	-93668312	-	L2c	LINE	L2	-10	3416	3262	8
952	chr12	39806888	39806889	chunk0044_373_1	7.36432	AR_DHT_Control	chr12	39806796	39807040	-93468269	+	L1MD2	LINE	L1	5712	5966	-389	8
953	chr12	40635102	40635103	chunk0044_395_1	53.1221	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	40635068	40635290	-92640019	+	LTR67B	LTR	ERVL	394	617	-3	8
954	chr12	42325009	42325010	chunk0044_442_1	13.1652	AR_DHT_Control	chr12	42324924	42325227	-90950082	-	Tigger3a	DNA	TcMar-Tigger	0	348	1	8
955	chr12	42362944	42362945	chunk0044_444_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	42362780	42363219	-90912090	+	LTR40c	LTR	ERVL	5	465	0	8
956	chr12	27727719	27727720	chunk0044_57_1	16.02215	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	27727620	27727780	-105547529	-	L1MB7	LINE	L1	-1013	5133	4978	8
957	chr12	27751869	27751870	chunk0044_60_1	6.3126	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	27751335	27751922	-105523387	-	LTR18B	LTR	ERVL	0	614	4	8
958	chr12	28118089	28118090	chunk0044_79_1	45.62856	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	28118057	28118134	-105157175	-	MER91C	DNA	hAT-Tip100	-34	106	23	8
959	chr12	28202552	28202553	chunk0044_80_1	6.48643	AR_DHT_Control	chr12	28202042	28203376	-105071933	-	L1M4	LINE	L1	-6136	1381	3	8
960	chr12	28464406	28464407	chunk0044_98_1	9.25776	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	28463805	28467055	-104808254	+	L1MA2	LINE	L1	17	3352	-4213	8
961	chr12	43447577	43447578	chunk0045_18_1	9.00866	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	43446747	43449651	-89825658	+	L1PREC2	LINE	L1	3245	6160	0	8
962	chr12	49629790	49629791	chunk0045_267_1	4.67092	AR_DHT_Control	chr12	49629523	49629817	-83645492	-	L2a	LINE	L2	-1	3425	3093	8
963	chr12	49735764	49735765	chunk0045_271_1	6.48643	AR_DHT_Control	chr12	49734956	49736004	-83539305	+	Harlequin-int	LTR	ERV1	263	1410	-5486	8
964	chr12	50673057	50673058	chunk0045_310_1	31.0472	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	50672708	50673179	-82602130	-	L1ME4a	LINE	L1	-229	5895	5549	8
965	chr12	50687242	50687243	chunk0045_312_1	11.1388	AR_DHT_Control	chr12	50687186	50687408	-82587901	-	MIRb	SINE	MIR	-39	229	7	8
966	chr12	51232779	51232780	chunk0045_343_1	92.9211	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	51232570	51233045	-82042264	-	L1ME1	LINE	L1	-266	5913	5458	8
967	chr12	51759811	51759812	chunk0045_355_1	4.53037	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	51759768	51760148	-81515161	-	MSTD	LTR	ERVL-MaLR	-17	379	1	8
968	chr12	52032546	52032547	chunk0045_365_1	24.8253	AR_DHT_Control	chr12	52032531	52032632	-81242677	+	L2a	LINE	L2	3253	3355	-71	8
969	chr12	53557933	53557934	chunk0045_436_1	5.6425	AR_DHT_Control	chr12	53557736	53558053	-79717256	+	MER33	DNA	hAT-Charlie	1	323	-1	8
970	chr12	53570538	53570539	chunk0045_440_1	7.04615	AR_DHT_Control	chr12	53570513	53570729	-79704580	-	MLT1C	LTR	ERVL-MaLR	-13	454	193	8
971	chr12	44962219	44962220	chunk0045_45_1	64.4779	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	44961280	44962232	-88313077	+	L1PA15	LINE	L1	1800	2766	-4084	8
972	chr12	45352954	45352955	chunk0045_61_1	18.4549	AR_DHT_Control	chr12	45352743	45353315	-87921994	-	L1MC5	LINE	L1	-291	9013	8433	8
973	chr12	45771892	45771893	chunk0045_78_1	7.97539	AR_DHT_Control	chr12	45771676	45772309	-87503000	+	L1M4b	LINE	L1	2463	3154	-3713	8
974	chr12	45803991	45803992	chunk0045_80_1	7.29426	AR_DHT_Control	chr12	45802367	45804052	-87471257	-	Charlie7	DNA	hAT-Charlie	-707	1905	136	8
975	chr12	46110184	46110185	chunk0045_99_1	6.73207	AR_DHT_Control	chr12	46109235	46110833	-87164476	+	L1PBa	LINE	L1	3	1624	-5239	8
976	chr12	56958855	56958856	chunk0046_101_1	5.44741	AR_DHT_Control	chr12	56958252	56962811	-76312498	+	L1P2	LINE	L1	9	4558	-1588	8
977	chr12	57388569	57388570	chunk0046_124_1	5.66005	AR_DHT_Control	chr12	57388306	57388763	-75886546	-	MER83	LTR	ERV1	-9	439	1	8
978	chr12	57439726	57439727	chunk0046_128_1	5.55081	AR_DHT_Control	chr12	57439147	57439815	-75835494	-	MLT1H2-int	LTR	ERVL-MaLR	-201	1208	518	8
979	chr12	58680278	58680279	chunk0046_179_1	8.79298	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	58678163	58681005	-74594304	-	L1MA4A	LINE	L1	-4072	3494	377	8
980	chr12	58827370	58827371	chunk0046_190_1	6.48643	AR_DHT_Control	chr12	58825857	58827595	-74447714	+	L1MA4A	LINE	L1	3626	5483	-836	8
981	chr12	58939384	58939385	chunk0046_198_1	27.31313	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	58939371	58939670	-74335639	-	MLT1A0	LTR	ERVL-MaLR	0	365	56	8
982	chr12	59390080	59390081	chunk0046_217_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	59389708	59396158	-73879151	+	L1PA8A	LINE	L1	1	6446	0	8
983	chr12	54387731	54387732	chunk0046_23_1	13.34919	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	54387577	54387748	-78887561	+	MIRb	SINE	MIR	69	260	-8	8
984	chr12	60678737	60678738	chunk0046_258_1	46.31031	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr12	60678052	60679854	-72595455	-	L1MA5A	LINE	L1	-4760	2089	63	8
985	chr12	61283326	61283327	chunk0046_271_1	36.76468	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	61283296	61283689	-71991620	+	Zaphod	DNA	hAT-Tip100	52	479	-3552	8
986	chr12	61664216	61664217	chunk0046_279_1	5.12066	AR_DHT_Control	chr12	61660507	61664822	-71610487	-	L1PA8A	LINE	L1	-2186	4275	10	8
987	chr12	62015247	62015248	chunk0046_285_1	13.18238	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	62015173	62015343	-71259966	+	L2a	LINE	L2	3239	3425	-1	8
988	chr12	62725118	62725119	chunk0046_328_1	6.70128	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	62724665	62725260	-70550049	-	Kanga1b	DNA	TcMar-Tc2	-3	776	168	8
989	chr12	63764686	63764687	chunk0046_385_1	11.6447	AR_DHT_Control	chr12	63764540	63765031	-69510278	-	LTR40a	LTR	ERVL	-2	517	10	8
990	chr12	64069160	64069161	chunk0046_400_1	19.4211	AR_DHT_Control	chr12	64069074	64069249	-69206060	+	MER102c	DNA	hAT-Charlie	118	331	0	8
991	chr12	55619300	55619301	chunk0046_56_1	6.33484	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	55619240	55619405	-77655904	+	AluJb	SINE	Alu	134	310	-2	8
992	chr12	55909327	55909328	chunk0046_62_1	275.6357	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	55909204	55909389	-77365920	-	L2b	LINE	L2	-224	3151	2960	8
993	chr12	56677799	56677800	chunk0046_93_1	12.8082	AR_DHT_Control	chr12	56677353	56677930	-76597379	-	MER119	DNA	hAT-Charlie	0	583	1	8
994	chr12	68755569	68755570	chunk0047_100_1	30.97172	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	68755494	68755914	-64519395	-	MSTB	LTR	ERVL-MaLR	0	426	1	8
995	chr12	69186375	69186376	chunk0047_123_1	9.01771	AR_DHT_Control	chr12	69185978	69186419	-64088890	+	MER4A1	LTR	ERV1	1	472	0	8
996	chr12	69706151	69706152	chunk0047_151_1	6.13915	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	69705584	69706663	-63568646	+	L2a	LINE	L2	2330	3421	-5	8
997	chr12	71756796	71756797	chunk0047_222_1	23.2018	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	71756778	71757017	-61518292	-	MIR	SINE	MIR	0	262	18	8
998	chr12	71856896	71856897	chunk0047_230_1	19.0466	AR_DHT_Control	chr12	71856878	71857039	-61418270	+	MIRb	SINE	MIR	71	251	-17	8
999	chr12	71949350	71949351	chunk0047_235_1	9.74833	AR_DHT_Control	chr12	71949083	71949428	-61325881	-	MamRep434	DNA	TcMar-Tigger	0	426	1	8
1000	chr12	72655604	72655605	chunk0047_259_1	6.98475	AR_DHT_Control	chr12	72655374	72655701	-60619608	+	L2c	LINE	L2	2973	3332	-55	8
1001	chr12	72757287	72757288	chunk0047_260_1	6.88185	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	72756651	72757594	-60517715	+	L1MA4A	LINE	L1	723	1663	-5903	8
1002	chr12	72971687	72971688	chunk0047_269_1	19.61162	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	72971429	72971748	-60303561	-	L4_A_Mam	LINE	RTE-X	-21	4969	4609	8
1003	chr12	73072555	73072556	chunk0047_275_1	5.80784	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	73072554	73073477	-60201832	-	L1PA14	LINE	L1	-5897	888	13	8
1004	chr12	73094164	73094165	chunk0047_276_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	73093383	73094587	-60180722	+	THE1B-int	LTR	ERVL-MaLR	1	1211	-369	8
1005	chr12	73692759	73692760	chunk0047_299_1	17.5473	AR_DHT_Control	chr12	73692517	73693270	-59582039	+	L1MA1	LINE	L1	6961	7714	-7	8
1006	chr12	73964866	73964867	chunk0047_310_1	175.1313	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	73964850	73965055	-59310254	+	MLT1D	LTR	ERVL-MaLR	1	242	-263	8
1007	chr12	74528504	74528505	chunk0047_334_1	21.4394	AR_DHT_Control	chr12	74528360	74528614	-58746695	-	ERVL-B4-int	LTR	ERVL	0	5714	5359	8
1008	chr12	74586814	74586815	chunk0047_337_1	7.08133	AR_DHT_Control	chr12	74586455	74586845	-58688464	-	L1MD2	LINE	L1	-6120	427	25	8
1009	chr12	75618617	75618618	chunk0047_393_1	12.1886	AR_DHT_Control	chr12	75617141	75620212	-57655097	+	L1PA7	LINE	L1	3084	6141	-13	8
1010	chr12	76264791	76264792	chunk0047_429_1	7.50454	AR_DHT_Control	chr12	76264575	76264949	-57010360	-	Tigger4	DNA	TcMar-Tigger	-1160	1571	1189	8
1011	chr12	76430220	76430221	chunk0047_440_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	76429910	76430315	-56844994	+	L1MA9	LINE	L1	1836	2314	-5172	8
1012	chr12	76719188	76719189	chunk0047_455_1	8.2993	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	76718858	76721514	-56553795	+	L1M1	LINE	L1	14	3394	-4171	8
1013	chr12	67708136	67708137	chunk0047_71_1	32.9442	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	67708080	67708325	-65566984	+	MIRc	SINE	MIR	3	266	-2	8
1014	chr12	80906799	80906800	chunk0048_175_1	3.65606	AR_DHT_Control	chr12	80906629	80906841	-52368468	+	L1PA15	LINE	L1	5954	6165	0	8
1015	chr12	80916914	80916915	chunk0048_176_1	44.3155	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	80916876	80917198	-52358111	-	L2a	LINE	L2	-2	3424	3028	8
1016	chr12	80926097	80926098	chunk0048_179_1	41.0929	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	80925907	80926309	-52349000	+	L2a	LINE	L2	2934	3409	-17	8
1017	chr12	81210054	81210055	chunk0048_199_1	7.06178	AR_DHT_Control	chr12	81209549	81210179	-52065130	-	MER41B	LTR	ERV1	0	634	1	8
1018	chr12	81395290	81395291	chunk0048_210_1	80.4793	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	81395078	81395426	-51879883	+	L1M5	LINE	L1	4232	4606	-1540	8
1019	chr12	81612136	81612137	chunk0048_249_1	17.0234	AR_DHT_Control	chr12	81605846	81612173	-51663136	-	L1PA16	LINE	L1	-2	6501	2	8
1020	chr12	82728917	82728918	chunk0048_289_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	82728587	82730158	-50545151	+	LTR12C	LTR	ERV1	2	1579	0	8
1021	chr12	82805312	82805313	chunk0048_301_1	15.7461	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	82804878	82805466	-50469843	-	LTR10C	LTR	ERV1	0	591	1	8
1022	chr12	83339408	83339409	chunk0048_321_1	7.48058	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	83338590	83340027	-49935282	+	L1MA2	LINE	L1	15	1453	-6112	8
1023	chr12	85041607	85041608	chunk0048_351_1	22.374	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	85041236	85041984	-48233325	-	L2a	LINE	L2	0	3426	2518	9
1024	chr12	86357070	86357071	chunk0048_377_1	8.21385	AR_DHT_Control	chr12	86356355	86362494	-46912815	+	L1PA5	LINE	L1	4	6149	-5	9
1025	chr12	87729109	87729110	chunk0048_395_1	14.04928	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	87729102	87729222	-45546087	+	L1MC	LINE	L1	2658	2780	-3366	9
1026	chr12	88238665	88238666	chunk0048_412_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	88238339	88239218	-45036091	-	L1M1	LINE	L1	-4964	2525	1992	9
1027	chr12	88635763	88635764	chunk0048_446_1	6.15258	AR_DHT_Control	chr12	88635094	88636251	-44639058	-	L1MC1	LINE	L1	-88	6245	4575	9
1028	chr12	89158873	89158874	chunk0049_1_1	7.57442	AR_DHT_Control	chr12	89158660	89158987	-44116322	+	Tigger18a	DNA	TcMar-Tigger	1	324	-528	9
1029	chr12	90923630	90923631	chunk0049_103_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	90923367	90923712	-42351597	-	LTR16	LTR	ERVL	0	438	95	9
1030	chr12	89301501	89301502	chunk0049_11_1	22.989	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	89300485	89302206	-43973103	+	L1ME3B	LINE	L1	4421	6239	-3	9
1031	chr12	91348934	91348935	chunk0049_115_1	10.2513	AR_DHT_Control	chr12	91348515	91349015	-41926294	-	MER31B	LTR	ERV1	0	466	2	9
1032	chr12	91530052	91530053	chunk0049_124_1	23.5309	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	91529894	91530328	-41744981	+	MLT1C	LTR	ERVL-MaLR	1	467	0	9
1033	chr12	91659291	91659292	chunk0049_134_1	38.09281	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	91658798	91659733	-41615576	+	L2a	LINE	L2	2428	3426	0	9
1034	chr12	92382514	92382515	chunk0049_178_1	9.07871	AR_DHT_Control	chr12	92382483	92382516	-40892793	-	L2a	LINE	L2	0	3387	3355	9
1035	chr12	92675057	92675058	chunk0049_184_1	5.86499	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	92674947	92675503	-40599806	+	MLT1F2	LTR	ERVL-MaLR	1	560	0	9
1036	chr12	93146546	93146547	chunk0049_205_1	5.24411	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	93146472	93146613	-40128696	+	MLT1H2	LTR	ERVL-MaLR	390	533	-16	9
1037	chr12	93226352	93226353	chunk0049_214_1	5.46037	AR_DHT_Control	chr12	93226026	93226371	-40048938	-	L1ME3Cz	LINE	L1	-270	727	356	9
1038	chr12	93413025	93413026	chunk0049_223_1	9.6205	AR_DHT_Control	chr12	93412457	93413038	-39862271	-	LTR10C	LTR	ERV1	-2	589	7	9
1039	chr12	89763015	89763016	chunk0049_36_1	26.13749	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	89762928	89763041	-43512268	-	LTR88c	LTR	Gypsy?	-695	167	54	9
1040	chr12	89770393	89770394	chunk0049_37_1	5.28628	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	89769141	89771604	-43503705	-	ERVL-B4-int	LTR	ERVL	-2052	3662	1244	9
1041	chr12	96101406	96101407	chunk0049_387_1	13.7322	AR_DHT_Control	chr12	96101327	96101643	-37173666	-	AluSz	SINE	Alu	-10	302	2	9
1042	chr12	90027236	90027237	chunk0049_54_1	57.44404	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	90027087	90027553	-43247756	+	MLT1C	LTR	ERVL-MaLR	1	465	-2	9
1043	chr12	90305986	90305987	chunk0049_72_1	44.0241	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	90305941	90306062	-42969247	-	LTR78B	LTR	ERV1	-1164	132	3	9
1044	chr12	90832684	90832685	chunk0049_93_1	5.9328	AR_DHT_Control	chr12	90832475	90833684	-42441625	-	L2	LINE	L2	-1736	1683	352	9
1045	chr12	102585180	102585181	chunk0050_144_1	6.20286	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	102585101	102585244	-30690065	+	L1PA13	LINE	L1	6022	6163	0	9
1046	chr12	102694452	102694453	chunk0050_148_1	64.5288	AR_DHT_Control	chr12	102693473	102697025	-30578284	+	L1MA2	LINE	L1	22	3634	-4012	9
1047	chr12	103994616	103994617	chunk0050_193_1	4.66817	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	103994591	103995720	-29279589	+	L2b	LINE	L2	2144	3372	-3	9
1048	chr12	104895544	104895545	chunk0050_226_1	7.42871	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	104895518	104895820	-28379489	+	Charlie13b	DNA	hAT-Charlie	59	385	-127	9
1049	chr12	105274617	105274618	chunk0050_243_1	5.14476	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	105274524	105274856	-28000453	-	MamGypLTR3a	LTR	Gypsy	-195	786	456	9
1050	chr12	106759059	106759060	chunk0050_294_1	6.26417	AR_DHT_Control	chr12	106758958	106759409	-26515900	-	L2b	LINE	L2	-5	3370	2924	9
1051	chr12	107043438	107043439	chunk0050_311_1	8.68286	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	107042606	107044601	-26230708	+	L1M2a	LINE	L1	411	2381	-5185	9
1052	chr12	107058185	107058186	chunk0050_315_1	15.43368	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	107058083	107058821	-26216488	+	L3	LINE	CR1	2240	3124	-975	9
1053	chr12	107892332	107892333	chunk0050_361_1	8.41215	AR_DHT_Control	chr12	107892162	107892388	-25382921	+	MIRb	SINE	MIR	5	246	-22	9
1054	chr12	108538491	108538492	chunk0050_370_1	23.36354	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	108538468	108538695	-24736614	+	L1MC5	LINE	L1	9075	9304	0	9
1055	chr12	108716925	108716926	chunk0050_380_1	5.60881	AR_DHT_Control	chr12	108716875	108717572	-24557737	-	L2b	LINE	L2	0	3375	2677	9
1056	chr12	109716935	109716936	chunk0050_413_1	8.76364	AR_DHT_Control	chr12	109716862	109717048	-23558261	-	MIRb	SINE	MIR	-46	222	21	9
1057	chr12	109940675	109940676	chunk0050_420_1	4.67225	AR_DHT_Control	chr12	109940597	109940880	-23334429	+	AluSz	SINE	Alu	1	284	-28	9
1058	chr12	110681494	110681495	chunk0050_451_1	14.2268	AR_DHT_Control	chr12	110681296	110681516	-22593793	-	L1ME4c	LINE	L1	-400	430	202	9
1059	chr12	115422063	115422064	chunk0051_127_1	13.5394	AR_DHT_Control	chr12	115422024	115422872	-17852437	+	L2a	LINE	L2	2497	3413	-13	9
1060	chr12	115693125	115693126	chunk0051_139_1	40.86939	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	115693100	115693158	-17582151	-	MIR	SINE	MIR	-171	91	35	9
1061	chr12	115835630	115835631	chunk0051_155_1	53.449	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	115835460	115835633	-17439676	+	L2a	LINE	L2	2935	3124	-302	9
1062	chr12	111758215	111758216	chunk0051_17_1	15.84802	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	111758135	111758263	-21517046	-	L2a	LINE	L2	-2	3424	3297	9
1063	chr12	116078660	116078661	chunk0051_172_1	39.1828	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	116078542	116078765	-17196544	+	MER58A	DNA	hAT-Charlie	1	223	-1	9
1064	chr12	116177160	116177161	chunk0051_187_1	41.9206	AR_DHT_Control	chr12	116177031	116177317	-17097992	-	L1ME3A	LINE	L1	-9	6164	5912	9
1065	chr12	116495485	116495486	chunk0051_206_1	33.44984	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	116495320	116495616	-16779693	-	MLT1F1	LTR	ERVL-MaLR	-265	304	1	9
1066	chr12	111817133	111817134	chunk0051_22_1	31.56991	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr12	111816598	111818873	-21456436	-	HERVK3-int	LTR	ERVK	-2	7200	4914	9
1067	chr12	116980220	116980221	chunk0051_233_1	11.3974	AR_DHT_Control	chr12	116979959	116980409	-16294900	+	MLT1O	LTR	ERVL-MaLR	75	524	-18	9
1068	chr12	118056466	118056467	chunk0051_271_1	18.16764	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	118055912	118056580	-15218729	+	L2b	LINE	L2	2577	3375	0	9
1069	chr12	118098563	118098564	chunk0051_275_1	17.67576	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	118098474	118098763	-15176546	-	L2b	LINE	L2	-34	3341	3037	9
1070	chr12	118228058	118228059	chunk0051_281_1	68.2139	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	118227966	118228153	-15047156	-	L1ME3Cz	LINE	L1	-43	954	721	9
1071	chr12	118228821	118228822	chunk0051_283_1	39.34323	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	118228451	118228922	-15046387	-	L1ME3Cz	LINE	L1	-277	720	74	9
1072	chr12	121317070	121317071	chunk0051_366_1	37.22409	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	121316762	121317253	-11958056	+	L1MB5	LINE	L1	6175	6646	-26	9
1073	chr12	122926113	122926114	chunk0051_431_1	8.2993	AR_DHT_Control	chr12	122925770	122926245	-10349064	+	L1MB5	LINE	L1	5690	6174	0	9
1074	chr12	113259999	113260000	chunk0051_74_1	4.06817	AR_DHT_Control	chr12	113259926	113260174	-20015135	-	L1MC4a	LINE	L1	-1829	6053	5867	9
1075	chr13	23540986	23540987	chunk0052_128_1	11.1716	AR_DHT_Control	chr13	23540668	23541019	-90823309	-	LTR47A2	LTR	ERVL	-76	356	1	9
1076	chr13	20025743	20025744	chunk0052_13_1	31.2876	AR_DHT_Control	chr13	20025671	20025953	-94338375	-	Tigger3a	DNA	TcMar-Tigger	-1	347	1	9
1077	chr13	23577695	23577696	chunk0052_131_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr13	23577390	23577722	-90786606	-	L2c	LINE	L2	0	3387	3039	9
1078	chr13	24236813	24236814	chunk0052_182_1	27.24812	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	24236614	24237076	-90127252	+	L1MB3	LINE	L1	5371	5835	-348	1
1079	chr13	24349287	24349288	chunk0052_185_1	14.53655	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr13	24348067	24350232	-90014096	-	ERVL-B4-int	LTR	ERVL	-59	5655	3388	1
1080	chr13	18212091	18212092	chunk0052_2_1	58.4618	Merged_Lncap_AR_Veh	chr13	18211705	18212272	-96152056	+	HSATI	Satellite	Satellite	1	567	-10	9
1081	chr13	24986427	24986428	chunk0052_201_1	18.262	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	24986380	24986907	-89377421	+	L1MB5	LINE	L1	5572	6124	-50	1
1082	chr13	25234084	25234085	chunk0052_211_1	30.16579	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	25234025	25234206	-89130122	-	MER5A	DNA	hAT-Charlie	0	189	1	1
1083	chr13	20217278	20217279	chunk0052_23_1	10.1791	AR_DHT_Control	chr13	20214804	20217787	-94146541	+	L1MD1	LINE	L1	3123	6139	-494	9
1084	chr12	124137065	124137066	chunk0052_270_1	19.49221	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	124136905	124137093	-9138216	-	MLT1K	LTR	ERVL-MaLR	-11	584	387	9
1085	chr12	124142889	124142890	chunk0052_272_1	5.3309	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	124142561	124143133	-9132176	+	MER61E	LTR	ERV1	1	569	0	9
1086	chr12	124353039	124353040	chunk0052_282_1	5.70291	AR_DHT_Control	chr12	124352667	124353116	-8922193	+	LTR82A	LTR	ERVL	342	845	-27	9
1087	chr12	124804449	124804450	chunk0052_303_1	5.81334	AR_DHT_Control	chr12	124804066	124804520	-8470789	+	MLT1K	LTR	ERVL-MaLR	90	573	-22	9
1088	chr12	124825829	124825830	chunk0052_304_1	65.2364	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	124825798	124826063	-8449246	+	L1MA9	LINE	L1	5887	6168	-144	9
1089	chr12	125812919	125812920	chunk0052_325_1	5.87242	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	125812829	125812927	-7462382	+	MIR	SINE	MIR	166	261	-1	9
1090	chr12	126895939	126895940	chunk0052_351_1	43.0219	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	126895748	126895985	-6379324	-	MLT1K	LTR	ERVL-MaLR	-6	589	337	9
1091	chr12	127303311	127303312	chunk0052_359_1	28.2247	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	127303299	127303431	-5971878	+	L1MA8	LINE	L1	6120	6251	-40	9
1092	chr12	131953058	131953059	chunk0052_435_1	5.32898	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	131953028	131953274	-1322035	+	MER106A	DNA	hAT-Charlie	1	233	-3	9
1093	chr12	132455886	132455887	chunk0052_444_1	10.4222	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	132455398	132456329	-818980	+	(TG)n	Simple_repeat	Simple_repeat	1	938	0	9
1094	chr12	133024238	133024239	chunk0052_463_1	5.08049	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	133024144	133025496	-249813	+	MLT1G3-int	LTR	ERVL-MaLR	13	1489	0	9
1095	chr13	19016852	19016853	chunk0052_7_1	9.21264	AR_DHT_Control	chr13	19016587	19017168	-95347160	+	MER4A	LTR	ERV1	34	664	0	9
1096	chr13	22325331	22325332	chunk0052_97_1	4.51651	AR_DHT_Control	chr13	22325318	22325418	-92038910	-	L2c	LINE	L2	-186	3201	3099	9
1097	chr13	29451042	29451043	chunk0053_113_1	7.36574	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	29450596	29451420	-84912908	+	L1MD	LINE	L1	2147	2979	-3167	1
1098	chr13	30984307	30984308	chunk0053_183_1	33.439	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	30983949	30984385	-83379943	-	L1ME1	LINE	L1	-51	6923	6486	1
1099	chr13	31657551	31657552	chunk0053_194_1	15.32536	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	31657438	31657767	-82706561	+	MER110	LTR	ERV1	151	479	-12	1
1100	chr13	32412725	32412726	chunk0053_230_1	8.27376	AR_DHT_Control	chr13	32412665	32412773	-81951555	-	L1MC4	LINE	L1	-172	7870	7766	1
1101	chr13	33196933	33196934	chunk0053_272_1	13.53803	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	33196503	33196964	-81167364	+	Charlie7	DNA	hAT-Charlie	215	689	-1923	1
1102	chr13	33228024	33228025	chunk0053_276_1	134.0031	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr13	33227818	33228203	-81136125	-	L2b	LINE	L2	-33	3342	2986	1
1103	chr13	26103612	26103613	chunk0053_3_1	10.1791	AR_DHT_Control	chr13	26102953	26103848	-88260480	+	L1P3	LINE	L1	8	896	-5565	1
1104	chr13	34011764	34011765	chunk0053_308_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr13	34011143	34012097	-80352231	+	LTR1D	LTR	ERV1	3	975	0	1
1105	chr13	34386138	34386139	chunk0053_333_1	6.48643	AR_DHT_Control	chr13	34386128	34386407	-79977921	+	LTR33	LTR	ERVL	141	429	-86	1
1106	chr13	36029441	36029442	chunk0053_381_1	71.5486	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	36029186	36029461	-78334867	+	L2c	LINE	L2	3096	3383	-4	1
1107	chr13	36323745	36323746	chunk0053_397_1	4.32388	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	36323330	36323828	-78040500	+	L4_A_Mam	LINE	RTE-X	3097	3698	-1292	1
1108	chr13	27393599	27393600	chunk0053_40_1	20.08362	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	27393236	27393809	-86970519	+	L1MD1	LINE	L1	5462	6035	-207	1
1109	chr13	28646891	28646892	chunk0053_99_1	6.43609	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	28646361	28647256	-85717072	+	L1M5	LINE	L1	3519	4434	-1712	1
1110	chr13	43096438	43096439	chunk0054_119_1	8.38514	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	43096397	43096532	-71267796	+	CR1-3_Croc	LINE	CR1	2549	2687	-918	1
1111	chr13	44812479	44812480	chunk0054_185_1	45.86332	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	44812246	44814255	-69550073	-	HAL1	LINE	L1	-214	2293	44	1
1112	chr13	46164788	46164789	chunk0054_246_1	52.70221	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr13	46164759	46164900	-68199428	-	MIR3	SINE	MIR	-24	184	47	1
1113	chr13	46260532	46260533	chunk0054_255_1	5.69226	AR_DHT_Control	chr13	46260434	46260876	-68103452	-	L2b	LINE	L2	-5	3382	2886	1
1114	chr13	48018633	48018634	chunk0054_292_1	68.4709	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	48018373	48019087	-66345241	-	L1MB3	LINE	L1	-32	6151	5432	1
1115	chr13	48391399	48391400	chunk0054_304_1	131.723	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	48390640	48391472	-65972856	-	L1MEc	LINE	L1	-3684	2635	1778	1
1116	chr13	49312787	49312788	chunk0054_332_1	26.8317	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	49312780	49313026	-65051302	-	L1ME3Cz	LINE	L1	-7	990	693	1
1117	chr13	49384696	49384697	chunk0054_335_1	7.10486	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	49383558	49386063	-64978265	-	Tigger1	DNA	TcMar-Tigger	-1	2417	1	1
1118	chr13	49569906	49569907	chunk0054_349_1	15.3744	AR_DHT_Control	chr13	49569748	49569933	-64794395	+	AluJb	SINE	Alu	134	306	-6	1
1119	chr13	49792699	49792700	chunk0054_366_1	7.53305	AR_DHT_Control	chr13	49792663	49792727	-64571601	+	G-rich	Low_complexity	Low_complexity	1	64	0	1
1120	chr13	49930732	49930733	chunk0054_372_1	236.4614	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr13	49930716	49930923	-64433405	-	MIRc	SINE	MIR	0	268	27	1
1121	chr13	50320427	50320428	chunk0054_388_1	35.106	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	50320427	50320470	-64043858	+	L2b	LINE	L2	3329	3371	-4	1
1122	chr13	50357882	50357883	chunk0054_392_1	3.81232	AR_DHT_Control	chr13	50357864	50357900	-64006428	-	LTR27	LTR	ERV1	-104	532	498	1
1123	chr13	41696697	41696698	chunk0054_52_1	13.3531	AR_DHT_Control	chr13	41696691	41697443	-72666885	+	L2a	LINE	L2	2050	2914	-505	1
1124	chr13	41812078	41812079	chunk0054_61_1	7.3092	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	41811972	41812219	-72552109	+	MIRb	SINE	MIR	7	268	0	1
1125	chr13	41903562	41903563	chunk0054_63_1	25.6264	AR_DHT_Control	chr13	41903396	41903823	-72460505	-	L2a	LINE	L2	-113	3313	2811	1
1126	chr13	42415941	42415942	chunk0054_81_1	14.45876	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	42415703	42416009	-71948319	-	MER2	DNA	TcMar-Tigger	0	345	1	1
1127	chr13	56769624	56769625	chunk0055_109_1	42.1781	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	56769400	56770001	-57594327	+	L1MC	LINE	L1	5177	5791	-542	1
1128	chr13	59471087	59471088	chunk0055_135_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	59469050	59473898	-54890430	+	L1MB1	LINE	L1	1064	5985	-681	1
1129	chr13	60157602	60157603	chunk0055_157_1	7.36432	AR_DHT_Control	chr13	60157402	60158204	-54206124	-	L1MEb	LINE	L1	-5182	888	78	1
1130	chr13	60517845	60517846	chunk0055_170_1	41.2341	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	60517835	60518007	-53846321	+	MER5C1	DNA	hAT-Charlie	75	263	0	1
1131	chr13	61128999	61129000	chunk0055_177_1	75.7852	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	61128875	61129141	-53235187	-	Tigger12c	DNA	TcMar-Tigger	-435	299	24	1
1132	chr13	62343330	62343331	chunk0055_217_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr13	62343090	62344454	-52019874	+	MER52A	LTR	ERV1	230	1755	0	1
1133	chr13	62729458	62729459	chunk0055_232_1	44.4285	AR_DHT_Control	chr13	62728034	62730344	-51633984	-	L1PA6	LINE	L1	-3824	2322	5	1
1134	chr13	67453064	67453065	chunk0055_313_1	6.48643	AR_DHT_Control	chr13	67452274	67456207	-46908121	+	L1PA6	LINE	L1	1	3885	-2261	1
1135	chr13	68663209	68663210	chunk0055_321_1	42.2977	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	68663199	68663379	-45700949	+	MIRc	SINE	MIR	56	248	-20	1
1136	chr13	73617930	73617931	chunk0055_390_1	7.36432	AR_DHT_Control	chr13	73617722	73617949	-40746379	-	MIR	SINE	MIR	0	262	26	1
1137	chr13	73977653	73977654	chunk0055_397_1	11.1999	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	73977582	73979350	-40384978	+	L1MC1	LINE	L1	4603	6328	-5	1
1138	chr13	74433442	74433443	chunk0055_410_1	36.0213	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	74433042	74434186	-39930142	+	MER97d	DNA	hAT-Tip100	16	1200	-5	1
1139	chr13	77112900	77112901	chunk0056_12_1	4.67225	AR_DHT_Control	chr13	77112740	77113036	-37251292	+	L2c	LINE	L2	1673	1986	-1433	1
1140	chr13	83125922	83125923	chunk0056_126_1	108.9465	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	83125153	83126117	-31238211	+	L1MDb	LINE	L1	5111	6083	-536	1
1141	chr13	83258968	83258969	chunk0056_137_1	20.8334	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	83257647	83259238	-31105090	+	L1MB1	LINE	L1	4253	5946	-222	1
1142	chr13	84697596	84697597	chunk0056_164_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	84696139	84699444	-29664884	+	L1PA10	LINE	L1	2369	5646	-707	1
1143	chr13	77167867	77167868	chunk0056_18_1	61.75462	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	77167439	77167874	-37196454	+	L1MC5a	LINE	L1	2276	2767	-10	1
1144	chr13	88732050	88732051	chunk0056_230_1	5.47383	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	88731867	88732064	-25632264	-	LTR37B	LTR	ERV1	-90	378	193	1
1145	chr13	89046707	89046708	chunk0056_237_1	60.1927	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	89044375	89046869	-25317459	-	Tigger2	DNA	TcMar-Tigger	0	2718	202	1
1146	chr13	89144097	89144098	chunk0056_242_1	65.341	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	89144087	89144123	-25220205	+	(CA)n	Simple_repeat	Simple_repeat	1	36	0	1
1147	chr13	89355731	89355732	chunk0056_250_1	10.1601	AR_DHT_Control	chr13	89355569	89355746	-25008582	-	MER45A	DNA	hAT-Tip100	0	178	1	1
1148	chr13	90027920	90027921	chunk0056_263_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr13	90026906	90028504	-24335824	+	THE1C-int	LTR	ERVL-MaLR	3	1631	0	1
1149	chr13	77290678	77290679	chunk0056_29_1	5.0408	AR_DHT_Control	chr13	77289934	77290852	-37073476	+	L1MD2	LINE	L1	5204	6151	-208	1
1150	chr13	91077499	91077500	chunk0056_318_1	46.0163	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	91077474	91077724	-23286604	+	MIRb	SINE	MIR	11	262	0	1
1151	chr13	77312940	77312941	chunk0056_35_1	27.96553	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	77312897	77313428	-37050900	+	L1MEf	LINE	L1	2614	3220	-2926	1
1152	chr13	94305581	94305582	chunk0056_414_1	4.36845	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	94305141	94305750	-20058578	-	Tigger17a	DNA	TcMar-Tigger	0	654	1	1
1153	chr13	94642382	94642383	chunk0056_425_1	9.13774	AR_DHT_Control	chr13	94642367	94642412	-19721916	+	GA-rich	Low_complexity	Low_complexity	1	45	0	1
1154	chr13	78379497	78379498	chunk0056_63_1	6.62784	AR_DHT_Control	chr13	78378824	78379578	-35984750	-	L1MC4a	LINE	L1	-2444	5438	4630	1
1155	chr13	82436617	82436618	chunk0056_99_1	41.2572	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	82436607	82436788	-31927540	-	HERVL40-int	LTR	ERVL	-27	5503	5305	1
1156	chr13	99198725	99198726	chunk0057_113_1	9.54696	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	99198463	99198834	-15165494	-	Charlie1a	DNA	hAT-Charlie	-280	1175	809	1
1157	chr13	100068838	100068839	chunk0057_144_1	6.04605	AR_DHT_Control	chr13	100068674	100069019	-14295309	+	L1MC5a	LINE	L1	213	539	-2238	1
1158	chr13	102823422	102823423	chunk0057_186_1	12.4942	AR_DHT_Control	chr13	102823315	102823516	-11540812	+	MIRb	SINE	MIR	47	265	-3	1
1159	chr13	105165809	105165810	chunk0057_251_1	8.27376	AR_DHT_Control	chr13	105165499	105166119	-9198209	+	MER73	LTR	ERVL	6	630	-14	1
1160	chr13	105255684	105255685	chunk0057_254_1	12.1886	AR_DHT_Control	chr13	105255591	105255730	-9108598	+	L2b	LINE	L2	2971	3113	-274	1
1161	chr13	95659774	95659775	chunk0057_29_1	79.0637	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	95659505	95659895	-18704433	+	MLT1C	LTR	ERVL-MaLR	53	464	-3	1
1162	chr13	106704883	106704884	chunk0057_314_1	6.17841	AR_DHT_Control	chr13	106704611	106705010	-7659318	+	L2a	LINE	L2	2990	3426	0	1
1163	chr13	106927635	106927636	chunk0057_328_1	26.9681	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	106927552	106927645	-7436683	+	L2c	LINE	L2	3251	3343	-44	1
1164	chr13	110448873	110448874	chunk0057_432_1	8.15319	AR_DHT_Control	chr13	110448719	110448981	-3915347	-	MIRb	SINE	MIR	0	262	6	1
1165	chr13	110475079	110475080	chunk0057_433_1	5.33602	SRA057177_Lncap_AR_DHT_10nm_4hr	chr13	110474554	110475083	-3889245	+	(CA)n	Simple_repeat	Simple_repeat	1	532	0	1
1166	chr13	110802010	110802011	chunk0057_449_1	9.09887	AR_DHT_Control	chr13	110801564	110802523	-3561805	+	Charlie7	DNA	hAT-Charlie	55	1107	-1505	1
1167	chr13	98760583	98760584	chunk0057_90_1	8.27376	AR_DHT_Control	chr13	98760348	98760717	-15603611	+	LTR61	LTR	ERV1	224	559	0	1
1168	chr14	23255271	23255272	chunk0058_159_1	4.27166	AR_DHT_Control	chr14	23254930	23255341	-83788377	+	LTR54	LTR	ERV1	5	510	0	1
1169	chr14	23301659	23301660	chunk0058_161_1	8.46955	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	23301598	23301665	-83742053	+	(GGAAGGC)n	Simple_repeat	Simple_repeat	1	72	0	1
1170	chr14	24273790	24273791	chunk0058_191_1	10.7608	AR_DHT_Control	chr14	24273736	24274007	-82769711	+	MIR	SINE	MIR	2	246	-16	1
1171	chr14	24541756	24541757	chunk0058_198_1	18.3087	AR_DHT_Control	chr14	24541118	24541943	-82501775	+	L1PA15	LINE	L1	5333	6158	-7	1
1172	chr14	19771351	19771352	chunk0058_20_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	19770890	19771845	-87271873	+	LTR27E	LTR	ERV1	1	1077	0	1
1173	chr14	26101601	26101602	chunk0058_270_1	14.52604	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	26101328	26101699	-80942019	+	MLT1I	LTR	ERVL-MaLR	41	411	0	1
1174	chr14	19942048	19942049	chunk0058_28_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	19941450	19942227	-87101491	+	L1M2a	LINE	L1	402	1205	-6361	1
1175	chr14	19954139	19954140	chunk0058_29_1	39.39629	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	19954016	19954141	-87089577	+	L2a	LINE	L2	3088	3240	-186	1
1176	chr14	27251912	27251913	chunk0058_310_1	7.36432	AR_DHT_Control	chr14	27251875	27252025	-79791693	-	L1MEb	LINE	L1	-5907	163	24	1
1177	chr14	27573146	27573147	chunk0058_318_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	27572641	27576187	-79467531	+	L1PA15	LINE	L1	1	3545	-2938	1
1178	chr14	28679117	28679118	chunk0058_335_1	8.15319	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	28678981	28679197	-78364521	-	MER58A	DNA	hAT-Charlie	-3	221	2	1
1179	chr14	28847938	28847939	chunk0058_342_1	12.1886	AR_DHT_Control	chr14	28846051	28851375	-78192343	+	L1PA6	LINE	L1	829	6154	0	1
1180	chr14	28949786	28949787	chunk0058_354_1	151.0947	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr14	28949519	28950623	-78093095	-	L1PA10	LINE	L1	-641	5527	4416	1
1181	chr13	111051337	111051338	chunk0058_390_1	9.25776	SRA057177_Lncap_AR_DHT_10nm_4hr	chr13	111051068	111051438	-3312890	+	(CACA)n	Simple_repeat	Simple_repeat	1	368	0	1
1182	chr13	112415047	112415048	chunk0058_410_1	4.55016	SRA057177_Lncap_AR_DHT_10nm_4hr	chr13	112414711	112416262	-1948066	-	L1M1	LINE	L1	-5336	2229	16	1
1183	chr14	20213704	20213705	chunk0058_44_1	9.21264	AR_DHT_Control	chr14	20213465	20215134	-86828584	-	L1MA7	LINE	L1	-153	6138	4459	1
1184	chr14	21085403	21085404	chunk0058_73_1	5.44741	AR_DHT_Control	chr14	21085393	21085520	-85958198	+	MIR3	SINE	MIR	4	140	-68	1
1185	chr14	21305471	21305472	chunk0058_81_1	6.29634	AR_DHT_Control	chr14	21305101	21305550	-85738168	-	L1MC1	LINE	L1	-218	6115	5658	1
1186	chr14	29757361	29757362	chunk0059_13_1	8.79298	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	29757285	29757467	-77286251	-	L2c	LINE	L2	-94	3281	3067	1
1187	chr14	31811898	31811899	chunk0059_130_1	59.4024	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	31806624	31812769	-75230949	-	L1PA6	LINE	L1	-5	6322	178	1
1188	chr14	31889507	31889508	chunk0059_134_1	5.6425	AR_DHT_Control	chr14	31889295	31889819	-75153899	-	L1MC5	LINE	L1	-412	8892	8356	1
1189	chr14	34677028	34677029	chunk0059_241_1	11.1716	AR_DHT_Control	chr14	34676945	34677139	-72366579	-	MIRb	SINE	MIR	-6	262	24	1
1190	chr14	35068374	35068375	chunk0059_251_1	11.4842	AR_DHT_Control	chr14	35068359	35068709	-71975009	+	LTR33	LTR	ERVL	13	362	-153	1
1191	chr14	35826862	35826863	chunk0059_292_1	7.16595	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	35826846	35826873	-71216845	+	(CGGGG)n	Simple_repeat	Simple_repeat	1	27	0	1
1192	chr14	29654731	29654732	chunk0059_3_1	22.8471	AR_DHT_Control	chr14	29654640	29654733	-77388985	+	L2a	LINE	L2	3260	3365	-61	1
1193	chr14	36062449	36062450	chunk0059_302_1	10.7301	AR_DHT_Control	chr14	36062355	36062855	-70980863	+	LTR33C	LTR	ERVL	13	628	0	1
1194	chr14	37274719	37274720	chunk0059_357_1	4.73472	AR_DHT_Control	chr14	37274629	37274816	-69768902	+	MIR	SINE	MIR	12	261	-1	1
1195	chr14	37459156	37459157	chunk0059_387_1	4.32388	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	37458896	37459792	-69583926	+	L1PB4	LINE	L1	2865	3755	-2391	1
1196	chr14	37527337	37527338	chunk0059_393_1	30.2284	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	37527330	37527355	-69516363	+	(TTA)n	Simple_repeat	Simple_repeat	1	25	0	1
1197	chr14	38671746	38671747	chunk0059_440_1	13.2288	AR_DHT_Control	chr14	38671724	38675217	-68368501	+	L1PA6	LINE	L1	1002	4504	-1815	1
1198	chr14	38839958	38839959	chunk0059_444_1	9.76623	AR_DHT_Control	chr14	38839838	38840581	-68203137	+	L1M6	LINE	L1	549	1413	-5083	1
1199	chr14	29734478	29734479	chunk0059_7_1	148.776	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	29734339	29735108	-77308610	-	L1MEc	LINE	L1	-5549	851	59	1
1200	chr14	30842667	30842668	chunk0059_89_1	14.24292	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	30842666	30842881	-76200837	-	MIRb	SINE	MIR	-16	252	21	1
1201	chr14	30852614	30852615	chunk0059_91_1	9.93187	AR_DHT_Control	chr14	30852514	30852753	-76190965	-	MamRep1527	LTR	LTR	-94	875	675	1
1202	chr14	44701606	44701607	chunk0060_134_1	7.80475	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	44701473	44701966	-62341752	-	MLT1H	LTR	ERVL-MaLR	-21	603	3	1
1203	chr14	45412068	45412069	chunk0060_165_1	22.2257	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	45411408	45416903	-61626815	+	L1PA6	LINE	L1	2	5491	-663	1
1204	chr14	45492227	45492228	chunk0060_171_1	6.43609	AR_DHT_Control	chr14	45491428	45493613	-61550105	-	L1M1	LINE	L1	-5321	2244	15	1
1205	chr14	47012640	47012641	chunk0060_189_1	6.54035	AR_DHT_Control	chr14	47012543	47012661	-60031057	+	MIRb	SINE	MIR	153	268	0	1
1206	chr14	39605966	39605967	chunk0060_19_1	3.99562	AR_DHT_Control	chr14	39605850	39606210	-67437508	-	MamGypsy2-I	LTR	Gypsy	-1737	2429	2042	1
1207	chr14	47562264	47562265	chunk0060_190_1	10.7862	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	47560370	47563578	-59480140	-	L1PA15	LINE	L1	-678	6107	2925	1
1208	chr14	47776492	47776493	chunk0060_193_1	7.58612	AR_DHT_Control	chr14	47776455	47776552	-59267166	+	MER34A	LTR	ERV1	7	104	-467	1
1209	chr14	47851109	47851110	chunk0060_194_1	8.79742	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	47848104	47852137	-59191581	+	L1PA10	LINE	L1	2477	6482	-1	1
1210	chr14	48335244	48335245	chunk0060_202_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	48334937	48335661	-58708057	+	MER50	LTR	ERV1	2	722	-12	1
1211	chr14	49429675	49429676	chunk0060_224_1	5.90945	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	49428823	49431440	-57612278	+	L1PA15	LINE	L1	4	2707	-3982	1
1212	chr14	39853609	39853610	chunk0060_25_1	6.58746	AR_DHT_Control	chr14	39853140	39853658	-67190060	+	L1ME2z	LINE	L1	5428	5959	-485	1
1213	chr14	50838593	50838594	chunk0060_301_1	5.00158	AR_DHT_Control	chr14	50838328	50838804	-56204914	+	LTR33	LTR	ERVL	3	513	-2	1
1214	chr14	51116905	51116906	chunk0060_312_1	28.19716	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	51116874	51117043	-55926675	+	MER117	DNA	hAT-Charlie	1	172	-25	1
1215	chr14	51366222	51366223	chunk0060_321_1	5.58563	AR_DHT_Control	chr14	51365720	51366445	-55677273	-	L2a	LINE	L2	-2624	795	1	1
1216	chr14	52609694	52609695	chunk0060_378_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	52607893	52609775	-54433943	-	L1MA4	LINE	L1	-3782	3777	1776	1
1217	chr14	40698276	40698277	chunk0060_38_1	6.6468	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	40698203	40698609	-66345109	-	MER57C2	LTR	ERV1	0	434	7	1
1218	chr14	41349894	41349895	chunk0060_48_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	41349256	41350884	-65692834	+	MER52A	LTR	ERV1	1	1755	0	1
1219	chr14	43308492	43308493	chunk0060_99_1	10.1791	AR_DHT_Control	chr14	43307577	43308640	-63735078	+	Tigger17b	DNA	TcMar-Tigger	1	1072	-1	1
1220	chr14	59039149	59039150	chunk0061_128_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	59039100	59039154	-48004564	+	(TAC)n	Simple_repeat	Simple_repeat	1	54	0	1
1221	chr14	55626378	55626379	chunk0061_13_1	7.36432	AR_DHT_Control	chr14	55625974	55626443	-51417275	-	L1M7	LINE	L1	-4843	1375	877	1
1222	chr14	60279022	60279023	chunk0061_200_1	133.9252	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	60278984	60279113	-46764605	-	MER112	DNA	hAT-Charlie	-7	254	114	1
1223	chr14	60382410	60382411	chunk0061_211_1	11.643	AR_DHT_Control	chr14	60381629	60387770	-46655948	+	L1PA6	LINE	L1	3	6138	-16	1
1224	chr14	61766326	61766327	chunk0061_299_1	34.2305	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	61765997	61766536	-45277182	+	LTR10C	LTR	ERV1	2	604	-29	1
1225	chr14	61777417	61777418	chunk0061_302_1	16.49806	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	61777393	61777586	-45266132	-	AluJr	SINE	Alu	-31	281	93	1
1226	chr14	62207166	62207167	chunk0061_311_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	62206493	62208171	-44835547	-	MSTD-int	LTR	ERVL-MaLR	-2	1733	2	1
1227	chr14	63370943	63370944	chunk0061_335_1	7.36432	AR_DHT_Control	chr14	63370707	63371197	-43672521	+	MLT1G1	LTR	ERVL-MaLR	3	579	0	1
1228	chr14	63678104	63678105	chunk0061_352_1	63.014	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	63677941	63678159	-43365559	-	LTR47A2	LTR	ERVL	-197	235	1	1
1229	chr14	63896475	63896476	chunk0061_362_1	35.3361	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	63895912	63896567	-43147151	-	L4_A_Mam	LINE	RTE-X	0	4990	4273	1
1230	chr14	56606941	56606942	chunk0061_67_1	5.80784	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	56606918	56607354	-50436364	-	L4_C_Mam	LINE	RTE-X	-281	4857	4342	1
1231	chr14	68870271	68870272	chunk0062_138_1	62.6075	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	68870266	68870477	-38173241	-	Kanga1a	DNA	TcMar-Tc2	-36	718	459	1
1232	chr14	66321226	66321227	chunk0062_15_1	55.1151	AR_DHT_Control	chr14	66320283	66321820	-40721898	+	L1MA5	LINE	L1	6110	7717	-2	1
1233	chr14	69310426	69310427	chunk0062_158_1	8.15319	AR_DHT_Control	chr14	69310370	69310483	-37733235	-	L1M5	LINE	L1	-1544	4602	4482	1
1234	chr14	69343021	69343022	chunk0062_161_1	49.3675	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr14	69342784	69343098	-37700620	+	L2a	LINE	L2	3080	3421	-5	1
1235	chr14	67004000	67004001	chunk0062_31_1	7.97539	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	67003871	67004012	-40039706	+	MIR3	SINE	MIR	4	142	-66	1
1236	chr14	73329898	73329899	chunk0062_321_1	15.3744	AR_DHT_Control	chr14	73329726	73329907	-33713811	+	MIR	SINE	MIR	38	261	-1	1
1237	chr14	73679977	73679978	chunk0062_346_1	24.8543	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	73679810	73680114	-33363604	-	L1M5	LINE	L1	-1134	5012	4687	1
1238	chr14	67151349	67151350	chunk0062_35_1	26.8288	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	67150874	67151634	-39892084	-	LTR37-int	LTR	ERV1	-4371	847	100	1
1239	chr14	73901138	73901139	chunk0062_363_1	10.0576	AR_DHT_Control	chr14	73900953	73901140	-33142578	-	Kanga2_a	DNA	TcMar-Tc2	-238	650	472	1
1240	chr14	74680547	74680548	chunk0062_385_1	18.64002	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	74680205	74680697	-32363021	+	L1MD1	LINE	L1	5320	5801	-441	1
1241	chr14	74774120	74774121	chunk0062_390_1	9.21264	AR_DHT_Control	chr14	74774056	74774243	-32269475	-	MER47B	DNA	TcMar-Tigger	0	418	214	1
1242	chr14	75761780	75761781	chunk0062_456_1	6.20286	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	75758637	75762113	-31281605	+	L1ME2z	LINE	L1	2719	6437	-7	1
1243	chr14	68108595	68108596	chunk0062_91_1	68.92974	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	68107250	68108794	-38934924	+	L1MB7	LINE	L1	4394	6175	-9	1
1244	chr14	76226903	76226904	chunk0063_13_1	18.6851	AR_DHT_Control	chr14	76226849	76226934	-30816784	+	L1ME3A	LINE	L1	6080	6160	-13	1
1245	chr14	79633108	79633109	chunk0063_145_1	8.41215	AR_DHT_Control	chr14	79632895	79633146	-27410572	-	MIRb	SINE	MIR	-4	264	1	1
1246	chr14	80878681	80878682	chunk0063_192_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	80877705	80879927	-26163791	+	L1MA2	LINE	L1	618	2667	-4501	1
1247	chr14	81400921	81400922	chunk0063_212_1	181.441	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	81400737	81400955	-25642763	+	MIRb	SINE	MIR	11	247	-15	1
1248	chr14	81903417	81903418	chunk0063_234_1	6.88185	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	81900702	81904354	-25139364	-	L1MA8	LINE	L1	-3356	4206	460	1
1249	chr14	82725012	82725013	chunk0063_253_1	5.12066	AR_DHT_Control	chr14	82724804	82725290	-24318428	+	(GT)n	Simple_repeat	Simple_repeat	1	511	0	1
1250	chr14	83434906	83434907	chunk0063_261_1	5.55081	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	83434156	83434998	-23608720	-	L1PB1	LINE	L1	-371	5780	4939	1
1251	chr14	84302894	84302895	chunk0063_284_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	84302627	84303495	-22740223	+	LTR27E	LTR	ERV1	190	1077	0	1
1252	chr14	84579222	84579223	chunk0063_297_1	5.21805	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	84578745	84579552	-22464166	+	LTR27D	LTR	ERV1	1	1020	-57	1
1253	chr14	84650472	84650473	chunk0063_301_1	4.5547	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	84649637	84653207	-22390511	-	L1PA7	LINE	L1	-5	6464	2881	1
1254	chr14	84697957	84697958	chunk0063_305_1	6.42963	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	84697846	84698039	-22345679	+	MLT1A0	LTR	ERVL-MaLR	162	365	0	1
1255	chr14	84959372	84959373	chunk0063_310_1	7.3267	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	84959272	84959573	-22084145	+	MLT1H1	LTR	ERVL-MaLR	182	555	0	1
1256	chr14	85415490	85415491	chunk0063_347_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	85414519	85415583	-21628135	-	L2a	LINE	L2	-64	3362	2243	1
1257	chr14	86390182	86390183	chunk0063_382_1	5.16131	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	86389942	86391545	-20652173	+	MER52A	LTR	ERV1	1	1755	0	1
1258	chr14	86730130	86730131	chunk0063_384_1	5.6425	AR_DHT_Control	chr14	86730105	86730508	-20313210	+	L1MC4	LINE	L1	6692	7098	-944	1
1259	chr14	87021014	87021015	chunk0063_389_1	11.1716	AR_DHT_Control	chr14	87021012	87021073	-20022645	+	(TACATA)n	Simple_repeat	Simple_repeat	1	62	0	1
1260	chr14	77470453	77470454	chunk0063_69_1	7.69414	AR_DHT_Control	chr14	77470441	77470481	-29573237	-	L2c	LINE	L2	-20	3367	3328	1
1261	chr14	77590867	77590868	chunk0063_75_1	4.51289	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	77590740	77590915	-29452803	-	L2a	LINE	L2	-158	3268	3053	1
1262	chr14	76143590	76143591	chunk0063_8_1	8.18895	AR_DHT_Control	chr14	76143498	76143829	-30899889	-	Tigger3a	DNA	TcMar-Tigger	0	348	1	1
1263	chr14	77981898	77981899	chunk0063_87_1	8.21408	AR_DHT_Control	chr14	77981830	77981971	-29061747	+	MER53	DNA	hAT	5	155	-38	1
1264	chr14	91266145	91266146	chunk0064_116_1	30.0147	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	91265963	91266296	-15777422	+	LTR29	LTR	ERV1	160	527	-95	1
1265	chr14	91546364	91546365	chunk0064_140_1	50.1205	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	91545872	91546380	-15497338	+	L1MD2	LINE	L1	5260	5802	-557	1
1266	chr14	92100661	92100662	chunk0064_163_1	9.40261	AR_DHT_Control	chr14	92099955	92100893	-14942825	+	L1ME3A	LINE	L1	5293	6168	-5	1
1267	chr14	92348189	92348190	chunk0064_171_1	18.11034	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	92348145	92348326	-14695392	+	MIRb	SINE	MIR	77	267	-1	1
1268	chr14	92698532	92698533	chunk0064_183_1	22.9274	AR_DHT_Control	chr14	92697797	92698773	-14344945	+	L1MC3	LINE	L1	6001	7014	-771	1
1269	chr14	93396705	93396706	chunk0064_218_1	10.1791	AR_DHT_Control	chr14	93395642	93396767	-13646951	-	L1M4	LINE	L1	-5598	1919	807	1
1270	chr14	94519635	94519636	chunk0064_249_1	4.96796	AR_DHT_Control	chr14	94518911	94520329	-12523389	+	(GGT)n	Simple_repeat	Simple_repeat	1	1421	0	1
1271	chr14	94710143	94710144	chunk0064_262_1	59.6477	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	94710087	94710609	-12333109	-	L1ME3G	LINE	L1	-391	5733	5520	1
1272	chr14	95157357	95157358	chunk0064_278_1	15.3276	Merged_Lncap_AR_Veh	chr14	95157309	95157360	-11886358	+	(GCC)n	Simple_repeat	Simple_repeat	1	51	0	1
1273	chr14	96431557	96431558	chunk0064_331_1	57.13304	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	96430487	96432702	-10611016	-	L1PA5	LINE	L1	-2203	4116	2027	1
1274	chr14	96708496	96708497	chunk0064_347_1	12.1955	AR_DHT_Control	chr14	96708372	96709474	-10334244	+	(AGT)n	Simple_repeat	Simple_repeat	1	1109	0	1
1275	chr14	99274759	99274760	chunk0064_396_1	6.6093	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	99274709	99274797	-7768921	+	(CCT)n	Simple_repeat	Simple_repeat	1	89	0	1
1276	chr14	99604247	99604248	chunk0064_418_1	5.82105	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	99604225	99604272	-7439446	+	(CCGCCCCG)n	Simple_repeat	Simple_repeat	1	49	0	1
1277	chr14	90858715	90858716	chunk0064_95_1	17.05659	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	90858631	90858862	-16184856	+	L1ME3	LINE	L1	235	463	-5779	1
1278	chr14	90981738	90981739	chunk0064_97_1	5.55081	AR_DHT_Control	chr14	90981410	90982316	-16061402	+	Charlie24	DNA	hAT-Charlie	62	1061	-1389	1
1279	chr15	24051254	24051255	chunk0065_103_1	22.60554	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	24051203	24051424	-77939765	+	L1MEc	LINE	L1	92	318	-6082	1
1280	chr15	24368728	24368729	chunk0065_109_1	7.62093	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	24367881	24369049	-77622140	-	L1MC3	LINE	L1	-3015	3306	2122	1
1281	chr15	24919816	24919817	chunk0065_129_1	64.20039	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	24919446	24919852	-77071337	-	MER31A	LTR	ERV1	-15	470	1	1
1282	chr15	24942890	24942891	chunk0065_132_1	4.56426	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	24942077	24943810	-77047379	-	ERVL-B4-int	LTR	ERVL	-784	4930	3147	1
1283	chr15	20340401	20340402	chunk0065_16_1	28.28542	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	20340241	20344102	-81647087	+	(AGCCAGCCA)n	Simple_repeat	Simple_repeat	1	4048	0	1
1284	chr15	25661083	25661084	chunk0065_162_1	24.0516	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	25660688	25661280	-76329909	+	L1M6B	LINE	L1	1025	1655	-852	1
1285	chr15	17081692	17081693	chunk0065_2_1	28.88994	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr15	17080532	17081942	-84909247	+	(GGAAT)n	Simple_repeat	Simple_repeat	4	1415	0	1
1286	chr15	20341427	20341428	chunk0065_20_1	25.12363	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	20340241	20344102	-81647087	+	(AGCCAGCCA)n	Simple_repeat	Simple_repeat	1	4048	0	1
1287	chr14	100091435	100091436	chunk0065_204_1	7.57442	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	100091049	100091952	-6951766	+	MER21A	LTR	ERVL	1	882	-56	1
1288	chr14	101722306	101722307	chunk0065_257_1	12.47616	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	101722082	101722338	-5321380	+	L1ME3Cz	LINE	L1	5218	5432	-692	1
1289	chr14	101749545	101749546	chunk0065_259_1	22.0068	AR_DHT_Control	chr14	101744246	101750388	-5293330	-	L1PA6	LINE	L1	-11	6143	1	1
1290	chr15	20642495	20642496	chunk0065_26_1	8.80534	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	20641984	20642724	-81348465	-	MER49	LTR	ERV1	0	923	182	1
1291	chr14	101792772	101792773	chunk0065_261_1	28.8739	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	101792361	101792872	-5250846	-	L1MC5a	LINE	L1	-784	1993	1465	1
1292	chr14	102057135	102057136	chunk0065_274_1	7.86105	AR_DHT_Control	chr14	102057000	102057477	-4986241	+	(AC)n	Simple_repeat	Simple_repeat	1	479	0	1
1293	chr14	102057531	102057532	chunk0065_275_1	5.16739	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	102057477	102057679	-4986039	+	L2a	LINE	L2	3218	3420	-6	1
1294	chr14	102531285	102531286	chunk0065_287_1	7.36432	AR_DHT_Control	chr14	102530975	102531370	-4512348	+	MER51B	LTR	ERV1	49	375	-2	1
1295	chr15	17083302	17083303	chunk0065_3_1	4.5547	AR_DHT_Control	chr15	17082412	17083573	-84907616	+	(GGAAT)n	Simple_repeat	Simple_repeat	5	1165	0	1
1296	chr15	20659382	20659383	chunk0065_31_1	6.94032	AR_DHT_Control	chr15	20659339	20659649	-81331540	+	AluSx3	SINE	Alu	1	309	-2	1
1297	chr14	103213864	103213865	chunk0065_325_1	49.345	AR_DHT_Control	chr14	103212930	103213965	-3829753	-	ERVL-E-int	LTR	ERVL	-935	4732	3668	1
1298	chr15	19640406	19640407	chunk0065_4_1	9.20249	Merged_Lncap_AR_Veh	chr15	19500000	19725253	-82265936	+	ALR/Alpha	Satellite	centr	1	226784	0	1
1299	chr14	105317224	105317225	chunk0065_404_1	20.8388	AR_DHT_Control	chr14	105317100	105317665	-1726053	-	L1ME3E	LINE	L1	-343	5899	5266	1
1300	chr14	105617465	105617466	chunk0065_410_1	21.53796	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr14	105617400	105618033	-1425685	+	(TCACA)n	Simple_repeat	Simple_repeat	1	643	0	1
1301	chr14	105823874	105823875	chunk0065_415_1	5.48709	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	105823666	105824028	-1219690	-	MER101-int	LTR	ERV1	-3890	2749	2358	1
1302	chr15	21285460	21285461	chunk0065_42_1	46.90735	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	21285274	21285697	-80705492	-	LTR9	LTR	ERV1	-208	404	1	1
1303	chr15	23034106	23034107	chunk0065_63_1	112.4396	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	23033945	23034288	-78956901	+	MER77	LTR	ERVL	1	351	-253	1
1304	chr15	23471518	23471519	chunk0065_72_1	11.8254	AR_DHT_Control	chr15	23471209	23473309	-78517880	-	ERVL-B4-int	LTR	ERVL	-944	4770	2633	1
1305	chr15	23750982	23750983	chunk0065_88_1	37.4994	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	23750653	23751245	-78239944	+	MER4B-int	LTR	ERV1	3079	3669	-3089	1
1306	chr15	23773388	23773389	chunk0065_89_1	7.65994	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	23772693	23774219	-78216970	-	L1PA16	LINE	L1	-3	6163	4638	1
1307	chr15	30173163	30173164	chunk0066_115_1	13.59767	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	30172482	30173339	-71817850	+	(GT)n	Simple_repeat	Simple_repeat	1	906	0	1
1308	chr15	31254639	31254640	chunk0066_135_1	8.45722	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	31254345	31254742	-70736447	+	MLT1F1	LTR	ERVL-MaLR	110	567	-2	1
1309	chr15	32109403	32109404	chunk0066_159_1	4.24079	AR_DHT_Control	chr15	32108996	32109532	-69881657	-	MER41A	LTR	ERV1	-1	553	1	1
1310	chr15	27283071	27283072	chunk0066_17_1	7.74912	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	27280435	27283233	-74707956	-	L1MD2	LINE	L1	-3108	3429	626	1
1311	chr15	33022862	33022863	chunk0066_175_1	7.37742	AR_DHT_Control	chr15	33022636	33022902	-68968287	+	L1MEi	LINE	L1	157	381	-1831	1
1312	chr15	33174011	33174012	chunk0066_191_1	48.1404	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	33173957	33174084	-68817105	+	LTR88a	LTR	Gypsy?	662	787	-29	1
1313	chr15	33598153	33598154	chunk0066_204_1	25.25114	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	33598124	33598441	-68392748	-	MER4-int	LTR	ERV1	-5314	1284	1005	1
1314	chr15	33754373	33754374	chunk0066_206_1	7.92341	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	33754199	33754594	-68236595	+	L2a	LINE	L2	2729	3180	-246	1
1315	chr15	33822327	33822328	chunk0066_208_1	5.82105	AR_DHT_Control	chr15	33822319	33822407	-68168782	-	Tigger12A	DNA	TcMar-Tigger	-4	815	728	1
1316	chr15	33888245	33888246	chunk0066_211_1	26.2941	AR_DHT_Control	chr15	33888145	33888571	-68102618	-	L2c	LINE	L2	-2	3385	2932	1
1317	chr15	34262920	34262921	chunk0066_236_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	34262069	34263014	-67728175	+	LTR28C	LTR	ERV1	54	1128	-1	1
1318	chr15	34805162	34805163	chunk0066_256_1	24.32394	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	34805138	34805189	-67186000	-	L2a	LINE	L2	-5	3370	3320	1
1319	chr15	34829357	34829358	chunk0066_259_1	17.7222	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	34829215	34829433	-67161756	+	L1MEd	LINE	L1	29	249	-6837	1
1320	chr15	35278699	35278700	chunk0066_283_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	35277481	35278767	-66712422	+	MSTB-int	LTR	ERVL-MaLR	1	1326	-325	1
1321	chr15	36612431	36612432	chunk0066_330_1	26.76	AR_DHT_Control	chr15	36612024	36612478	-65378711	+	MLT1J	LTR	ERVL-MaLR	3	506	-6	1
1322	chr15	27630968	27630969	chunk0066_34_1	41.0524	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	27630958	27631011	-74360178	+	L2a	LINE	L2	3369	3424	-2	1
1323	chr15	27672800	27672801	chunk0066_36_1	5.19865	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	27672654	27672843	-74318346	+	(GCACAT)n	Simple_repeat	Simple_repeat	1	207	0	1
1324	chr15	38295314	38295315	chunk0066_360_1	7.74912	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	38295134	38295545	-63695644	-	Tigger3a	DNA	TcMar-Tigger	0	348	1	1
1325	chr15	38541116	38541117	chunk0066_373_1	12.7341	AR_DHT_Control	chr15	38541104	38541231	-63449958	-	MIRc	SINE	MIR	-9	259	128	1
1326	chr15	38702871	38702872	chunk0066_374_1	5.41601	AR_DHT_Control	chr15	38702426	38702880	-63288309	+	LTR22A	LTR	ERVK	1	458	0	1
1327	chr15	39554375	39554376	chunk0066_419_1	6.10159	AR_DHT_Control	chr15	39554290	39554858	-62436331	+	CR1-16_AMi	LINE	CR1	195	729	-122	1
1328	chr15	42764820	42764821	chunk0067_123_1	10.1791	AR_DHT_Control	chr15	42764132	42770256	-59220933	+	L1PA6	LINE	L1	1	6152	-2	1
1329	chr15	44385447	44385448	chunk0067_180_1	5.6425	AR_DHT_Control	chr15	44385369	44385559	-57605630	-	L1MB5	LINE	L1	-668	5506	5332	1
1330	chr15	45345175	45345176	chunk0067_222_1	27.9859	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	45345098	45345266	-56645923	+	MLT2C2	LTR	ERVL	265	403	-61	1
1331	chr15	46676772	46676773	chunk0067_271_1	6.86932	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	46676541	46676869	-55314320	-	LTR16A	LTR	ERVL	-112	344	1	1
1332	chr15	47177242	47177243	chunk0067_277_1	53.0037	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	47177100	47177565	-54813624	+	MLT1H2	LTR	ERVL-MaLR	15	489	0	1
1333	chr15	40397799	40397800	chunk0067_31_1	56.0323	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	40397757	40397829	-61593360	-	L1M5	LINE	L1	-254	5908	5828	1
1334	chr15	49093631	49093632	chunk0067_386_1	6.30505	AR_DHT_Control	chr15	49093620	49093655	-52897534	+	(ATTTTG)n	Simple_repeat	Simple_repeat	1	36	0	1
1335	chr15	49110563	49110564	chunk0067_390_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	49110028	49114203	-52876986	+	L1MA4A	LINE	L1	719	5024	-2541	1
1336	chr15	50006368	50006369	chunk0067_439_1	43.9764	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	50006337	50006396	-51984793	+	(ATAG)n	Simple_repeat	Simple_repeat	1	62	0	1
1337	chr15	50163752	50163753	chunk0067_442_1	5.99997	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	50162805	50165040	-51826149	-	L1M1	LINE	L1	-5101	2464	182	1
1338	chr15	41206557	41206558	chunk0067_65_1	7.36432	AR_DHT_Control	chr15	41206549	41206599	-60784590	+	MIRc	SINE	MIR	204	253	-15	1
1339	chr15	52296077	52296078	chunk0068_105_1	5.24053	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	52295994	52296782	-49694407	+	L1M5	LINE	L1	4210	5079	-1067	1
1340	chr15	52478801	52478802	chunk0068_119_1	23.04848	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	52478673	52479001	-49512188	-	Tigger2	DNA	TcMar-Tigger	-2127	591	263	1
1341	chr15	52601438	52601439	chunk0068_123_1	23.7094	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	52601391	52601454	-49389735	-	Charlie15a	DNA	hAT-Charlie	-18	206	147	1
1342	chr15	54724888	54724889	chunk0068_184_1	22.5549	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	54724433	54727273	-47263916	-	L1MA2	LINE	L1	-3116	4449	1540	1
1343	chr15	54760964	54760965	chunk0068_185_1	5.77762	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	54760245	54761640	-47229549	+	L1MA1	LINE	L1	521	2421	-5144	1
1344	chr15	54944855	54944856	chunk0068_200_1	111.7202	Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	54944760	54950216	-47040973	+	L1PA6	LINE	L1	717	6153	-1	1
1345	chr15	55004455	55004456	chunk0068_206_1	5.51262	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	55004424	55004556	-46986633	+	(TG)n	Simple_repeat	Simple_repeat	1	143	0	1
1346	chr15	56422407	56422408	chunk0068_262_1	20.32857	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	56422281	56422638	-45568551	-	L1MEc	LINE	L1	-4024	2376	1948	1
1347	chr15	56451535	56451536	chunk0068_266_1	14.1125	AR_DHT_Control	chr15	56451144	56451566	-45539623	-	L1MB4	LINE	L1	-6158	449	9	1
1348	chr15	56969029	56969030	chunk0068_287_1	63.94285	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	56968673	56969268	-45021921	-	MER4A1_	LTR	ERV1	-1	599	1	1
1349	chr15	51060245	51060246	chunk0068_34_1	25.386	AR_DHT_Control	chr15	51060158	51060468	-50930721	+	MARNA	DNA	TcMar-Mariner	255	572	-14	1
1350	chr15	58159914	58159915	chunk0068_371_1	15.44117	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	58159370	58160425	-43830764	-	L1MA4	LINE	L1	-1	6299	5235	1
1351	chr15	59456206	59456207	chunk0068_426_1	5.6425	AR_DHT_Control	chr15	59455944	59456381	-42534808	-	L2c	LINE	L2	0	3387	2913	1
1352	chr15	51676213	51676214	chunk0068_52_1	3.93843	AR_DHT_Control	chr15	51676184	51676373	-50314816	-	L2c	LINE	L2	-5	3382	3185	1
1353	chr15	51796831	51796832	chunk0068_60_1	6.94497	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	51796509	51797143	-50194046	-	MER44D	DNA	TcMar-Tigger	-1	704	32	1
1354	chr15	52132404	52132405	chunk0068_91_1	23.5971	AR_DHT_Control	chr15	52132336	52132472	-49858717	+	L2a	LINE	L2	2660	2791	-628	1
1355	chr15	62436415	62436416	chunk0069_143_1	27.63904	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	62436179	62436659	-39554530	-	L2b	LINE	L2	-2	3424	2939	1
1356	chr15	62506393	62506394	chunk0069_151_1	44.3881	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	62506369	62506417	-39484772	+	L2b	LINE	L2	3328	3375	0	1
1357	chr15	62528722	62528723	chunk0069_156_1	42.3279	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	62528245	62528800	-39462389	-	LTR102_Mam	LTR	ERVL	0	851	250	1
1358	chr15	63121647	63121648	chunk0069_184_1	9.21433	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	63121642	63121702	-38869487	+	GA-rich	Low_complexity	Low_complexity	1	60	0	1
1359	chr15	63466497	63466498	chunk0069_204_1	48.3182	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	63466422	63466531	-38524658	+	L2a	LINE	L2	3299	3424	-2	1
1360	chr15	64558691	64558692	chunk0069_259_1	7.09019	AR_DHT_Control	chr15	64558492	64558738	-37432451	+	L2b	LINE	L2	3085	3376	-11	1
1361	chr15	64669127	64669128	chunk0069_268_1	10.8017	AR_DHT_Control	chr15	64668984	64669570	-37321619	+	L1ME4b	LINE	L1	164	829	-63	1
1362	chr15	64943778	64943779	chunk0069_277_1	5.50529	AR_DHT_Control	chr15	64943641	64943867	-37047322	+	L2c	LINE	L2	3056	3273	-102	1
1363	chr15	65161221	65161222	chunk0069_284_1	21.36924	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	65161153	65161393	-36829796	+	MamRep137	DNA	TcMar-Tigger	246	489	-21	1
1364	chr15	65524832	65524833	chunk0069_299_1	12.1886	AR_DHT_Control	chr15	65524505	65525194	-36465995	-	MER49	LTR	ERV1	-33	890	198	1
1365	chr15	66000596	66000597	chunk0069_324_1	33.10239	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	66000571	66000667	-35990522	+	L2a	LINE	L2	3337	3426	0	1
1366	chr15	66813153	66813154	chunk0069_355_1	15.2076	AR_DHT_Control	chr15	66811397	66814133	-35177056	-	L1PA6	LINE	L1	-3403	2743	5	1
1367	chr15	67750552	67750553	chunk0069_393_1	5.56779	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	67750506	67750678	-34240511	+	MER5A	DNA	hAT-Charlie	1	188	-1	1
1368	chr15	68435112	68435113	chunk0069_437_1	7.38582	AR_DHT_Control	chr15	68434661	68435327	-33555862	-	L1MB7	LINE	L1	-30	6154	5527	1
1369	chr15	68592756	68592757	chunk0069_444_1	143.7525	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	68592724	68592774	-33398415	+	(TGTAC)n	Simple_repeat	Simple_repeat	1	53	0	1
1370	chr15	61030037	61030038	chunk0069_76_1	7.72091	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	61030029	61030432	-40960757	+	L1MC4	LINE	L1	7471	7900	-142	1
1371	chr15	61033125	61033126	chunk0069_77_1	16.36242	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	61032909	61033134	-40958055	-	MIRb	SINE	MIR	-1	267	15	1
1372	chr15	61295493	61295494	chunk0069_93_1	12.95731	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	61295154	61295535	-40695654	+	MLT2C1	LTR	ERVL	1	397	0	1
1373	chr15	61328213	61328214	chunk0069_95_1	4.22747	AR_DHT_Control	chr15	61328102	61328394	-40662795	-	L1ME3Cz	LINE	L1	-525	472	189	1
1374	chr15	68944765	68944766	chunk0070_15_1	42.9702	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	68944636	68944826	-33046363	-	MER58A	DNA	hAT-Charlie	-10	214	13	1
1375	chr15	71199787	71199788	chunk0070_153_1	13.60046	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	71199439	71199936	-30791253	+	(TG)n	Simple_repeat	Simple_repeat	1	522	0	1
1376	chr15	71252197	71252198	chunk0070_157_1	16.0254	AR_DHT_Control	chr15	71252162	71252303	-30738886	-	UCON43	Unknown	Unknown	-6	166	26	1
1377	chr15	71291662	71291663	chunk0070_159_1	5.40372	AR_DHT_Control	chr15	71291270	71291758	-30699431	-	MLT2B4	LTR	ERVL	0	556	6	1
1378	chr15	71868207	71868208	chunk0070_186_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	71867954	71868620	-30122569	-	MLT1E2	LTR	ERVL-MaLR	0	627	1	1
1379	chr15	72060890	72060891	chunk0070_193_1	8.7059	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	72060423	72062737	-29928452	+	L1M1	LINE	L1	172	2523	-5042	1
1380	chr15	72754642	72754643	chunk0070_224_1	7.91804	AR_DHT_Control	chr15	72754337	72755028	-29236161	+	L1ME4b	LINE	L1	180	891	-1	1
1381	chr15	73058155	73058156	chunk0070_239_1	17.91934	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	73058014	73058169	-28933020	-	L1ME3G	LINE	L1	-238	686	538	1
1382	chr15	69222214	69222215	chunk0070_25_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	69221889	69222526	-32768663	-	L1P4e	LINE	L1	-5084	1207	460	1
1383	chr15	73654631	73654632	chunk0070_257_1	4.19197	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	73654579	73655098	-28336091	+	MER34A1	LTR	ERV1	11	568	-19	1
1384	chr15	74360092	74360093	chunk0070_277_1	128.0009	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	74359785	74360275	-27630914	+	MER41-int	LTR	ERV1	2816	3327	-4489	1
1385	chr15	74506144	74506145	chunk0070_280_1	5.90945	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	74506141	74506319	-27484870	+	MLT1L	LTR	ERVL-MaLR	1	185	-425	1
1386	chr15	69307347	69307348	chunk0070_30_1	4.46365	AR_DHT_Control	chr15	69307189	69307396	-32683793	-	L1MB3	LINE	L1	-396	5787	5574	1
1387	chr15	76477476	76477477	chunk0070_378_1	9.19742	AR_DHT_Control	chr15	76477464	76477885	-25513304	-	L1M5	LINE	L1	-437	5687	5254	1
1388	chr15	76533275	76533276	chunk0070_379_1	30.5187	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	76533268	76533625	-25457564	+	Tigger3a	DNA	TcMar-Tigger	4	348	0	1
1389	chr15	76552901	76552902	chunk0070_380_1	4.44156	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	76552311	76554785	-25436404	+	L1PA15	LINE	L1	1388	3832	-4323	1
1390	chr15	76799890	76799891	chunk0070_390_1	5.90945	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	76799599	76799989	-25191200	+	MER70A	LTR	ERVL	23	432	-40	1
1391	chr15	68803188	68803189	chunk0070_4_1	30.3757	AR_DHT_Control	chr15	68803149	68803315	-33187874	+	MIRb	SINE	MIR	90	257	-11	1
1392	chr15	77885659	77885660	chunk0070_422_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	77885433	77886029	-24105160	+	(CA)n	Simple_repeat	Simple_repeat	1	597	0	1
1393	chr15	78456086	78456087	chunk0070_452_1	22.44223	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	78455788	78456214	-23534975	-	MLT1F	LTR	ERVL-MaLR	-2	546	1	1
1394	chr15	70091691	70091692	chunk0070_77_1	23.82708	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr15	70091662	70091707	-31899482	+	(AGACAG)n	Simple_repeat	Simple_repeat	1	45	0	1
1395	chr15	70174050	70174051	chunk0070_87_1	6.25666	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	70174050	70174221	-31816968	-	MIR3	SINE	MIR	-28	180	13	1
1396	chr15	83447404	83447405	chunk0071_180_1	17.693	AR_DHT_Control	chr15	83447374	83447409	-18543780	+	(TGTGGC)n	Simple_repeat	Simple_repeat	1	35	0	1
1397	chr15	83918763	83918764	chunk0071_196_1	5.40815	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	83918263	83919404	-18071785	-	L2a	LINE	L2	-13	3413	2118	1
1398	chr15	85486204	85486205	chunk0071_257_1	10.1809	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	85486194	85486605	-16504584	-	L1M4	LINE	L1	-924	5222	4796	1
1399	chr15	85514509	85514510	chunk0071_260_1	10.5451	AR_DHT_Control	chr15	85513708	85514600	-16476589	-	L1MC4	LINE	L1	-400	7642	6746	1
1400	chr15	85649113	85649114	chunk0071_273_1	15.78895	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	85649081	85649316	-16341873	-	MIRb	SINE	MIR	-6	262	16	1
1401	chr15	85819865	85819866	chunk0071_287_1	80.45324	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	85819747	85820135	-16171054	-	L1MC5a	LINE	L1	-2067	710	293	1
1402	chr15	85837275	85837276	chunk0071_289_1	26.73851	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	85837159	85837307	-16153882	-	MIRb	SINE	MIR	-58	210	57	1
1403	chr15	85926378	85926379	chunk0071_298_1	23.46563	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr15	85926232	85926476	-16064713	+	L2	LINE	L2	807	1059	-2360	1
1404	chr15	86179776	86179777	chunk0071_308_1	32.1426	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	86179281	86181689	-15809500	+	L1ME1	LINE	L1	3702	6162	-17	1
1405	chr15	79582591	79582592	chunk0071_31_1	6.37162	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	79581490	79584746	-22406443	-	L1MB2	LINE	L1	-24	6147	2884	1
1406	chr15	86544177	86544178	chunk0071_315_1	4.83532	AR_DHT_Control	chr15	86544097	86544425	-15446764	-	MLT1H	LTR	ERVL-MaLR	-5	544	135	1
1407	chr15	87104674	87104675	chunk0071_328_1	4.55016	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	87103906	87109067	-14882122	+	L1MA4A	LINE	L1	718	6166	-1396	1
1408	chr15	87565249	87565250	chunk0071_331_1	8.08101	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	87565246	87565484	-14425705	+	MIR	SINE	MIR	1	238	-24	1
1409	chr15	89911139	89911140	chunk0071_436_1	6.21736	AR_DHT_Control	chr15	89911006	89911208	-12079981	+	MIRc	SINE	MIR	41	268	0	1
1410	chr15	80022539	80022540	chunk0071_49_1	8.27376	AR_DHT_Control	chr15	80022369	80022787	-21968402	-	LTR33	LTR	ERVL	-39	476	30	1
1411	chr15	78696593	78696594	chunk0071_5_1	29.32291	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	78696326	78696727	-23294462	-	L1MA2	LINE	L1	-64	6240	5831	1
1412	chr15	80326785	80326786	chunk0071_59_1	4.9245	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	80326671	80326998	-21664191	+	MamGypLTR1c	LTR	Gypsy	128	527	-255	1
1413	chr15	91217292	91217293	chunk0072_104_1	10.4755	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	91217196	91217395	-10773794	-	L2c	LINE	L2	-5	3382	3195	1
1414	chr15	91380105	91380106	chunk0072_110_1	7.58612	AR_DHT_Control	chr15	91379509	91381496	-10609693	-	L1MC1	LINE	L1	-1	6332	4401	1
1415	chr15	92503994	92503995	chunk0072_120_1	7.82111	AR_DHT_Control	chr15	92503965	92504109	-9487080	-	LTR79	LTR	ERVL	-160	367	223	1
1416	chr15	92600973	92600974	chunk0072_124_1	14.6511	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	92600828	92600976	-9390213	-	L2c	LINE	L2	-5	3382	3243	1
1417	chr15	92840512	92840513	chunk0072_154_1	8.41215	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	92840457	92840534	-9150655	+	MIRb	SINE	MIR	140	214	-54	1
1418	chr15	92882810	92882811	chunk0072_157_1	4.76708	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	92882777	92882821	-9108368	+	GA-rich	Low_complexity	Low_complexity	1	45	0	1
1419	chr15	94293897	94293898	chunk0072_194_1	9.28153	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	94293670	94294320	-7696869	+	L1ME1	LINE	L1	5450	6119	-60	1
1420	chr15	95653317	95653318	chunk0072_218_1	8.58634	AR_DHT_Control	chr15	95653185	95653456	-6337733	+	L2b	LINE	L2	3071	3346	-41	1
1421	chr16	562491	562492	chunk0072_24_1	4.67092	AR_DHT_Control	chr16	562411	562643	-89775702	+	(AC)n	Simple_repeat	Simple_repeat	1	233	0	1
1422	chr15	98256631	98256632	chunk0072_283_1	10.1791	AR_DHT_Control	chr15	98256620	98256789	-3734400	-	MIRb	SINE	MIR	-34	234	34	1
1423	chr15	98868780	98868781	chunk0072_316_1	5.10868	AR_DHT_Control	chr15	98868574	98868819	-3122370	+	MIR	SINE	MIR	5	257	-5	1
1424	chr15	99760299	99760300	chunk0072_356_1	49.6766	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	99760260	99760458	-2230731	+	MIR	SINE	MIR	19	236	-26	1
1425	chr15	99943666	99943667	chunk0072_368_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	99942896	99944856	-2046333	-	L1MA9	LINE	L1	-5159	2407	400	1
1426	chr15	100760612	100760613	chunk0072_402_1	32.3365	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	100760429	100760613	-1230576	+	MER91B	DNA	hAT-Tip100	1	177	-13	1
1427	chr15	100940809	100940810	chunk0072_416_1	4.67225	AR_DHT_Control	chr15	100940695	100940841	-1050348	+	LTR86A1	LTR	ERVL	1	148	-360	1
1428	chr15	101717383	101717384	chunk0072_450_1	4.84918	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	101717259	101717401	-273788	+	MIRb	SINE	MIR	92	262	0	1
1429	chr16	1297508	1297509	chunk0072_50_1	21.85851	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	1297388	1297516	-89040829	+	MER4D	LTR	ERV1	740	872	0	1
1430	chr16	1421250	1421251	chunk0072_52_1	6.42963	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	1421168	1421273	-88917072	-	AluJb	SINE	Alu	0	312	216	1
1431	chr16	1646205	1646206	chunk0072_61_1	188.52886	Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	1645835	1646988	-88691357	-	L1MC3	LINE	L1	-1671	6114	4808	1
1432	chr16	4481723	4481724	chunk0073_100_1	35.5766	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	4481573	4481746	-85856599	+	L2c	LINE	L2	3200	3377	-10	1
1433	chr16	6693611	6693612	chunk0073_152_1	6.01382	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	6692766	6693843	-83644502	+	(ATC)n	Simple_repeat	Simple_repeat	1	1078	0	1
1434	chr16	6957925	6957926	chunk0073_153_1	4.55016	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	6957771	6958070	-83380275	-	MLT1F	LTR	ERVL-MaLR	-251	297	8	1
1435	chr16	9472826	9472827	chunk0073_202_1	8.09329	AR_DHT_Control	chr16	9472712	9473288	-80865057	+	L1ME2	LINE	L1	5637	6217	-120	1
1436	chr16	10040131	10040132	chunk0073_207_1	10.2986	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	10039875	10040769	-80297576	+	(CA)n	Simple_repeat	Simple_repeat	1	929	0	1
1437	chr16	2260456	2260457	chunk0073_22_1	7.73888	AR_DHT_Control	chr16	2260398	2260848	-88077497	+	PABL_A-int	LTR	ERV1	3961	4409	-1177	1
1438	chr16	11690169	11690170	chunk0073_243_1	13.77701	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	11690101	11690267	-78648078	-	UCON4	Unknown	Unknown	-73	230	55	1
1439	chr16	13783636	13783637	chunk0073_288_1	7.03383	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	13783237	13783771	-76554574	-	MLT1F	LTR	ERVL-MaLR	0	548	3	1
1440	chr16	14506121	14506122	chunk0073_334_1	34.23872	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	14505874	14506582	-75831763	+	L1MC4	LINE	L1	7206	7918	-124	1
1441	chr16	15468946	15468947	chunk0073_369_1	8.58634	AR_DHT_Control	chr16	15468648	15468965	-74869380	-	L1MD2	LINE	L1	-954	5894	5579	1
1442	chr16	16088651	16088652	chunk0073_397_1	4.70374	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	16088534	16088705	-74249640	+	MER58B	DNA	hAT-Charlie	30	200	-141	1
1443	chr16	19251721	19251722	chunk0073_439_1	4.79975	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	19251599	19251759	-71086586	-	LTR105_Mam	LTR	ERVL	-393	207	5	1
1444	chr16	3039175	3039176	chunk0073_51_1	5.51262	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	3039120	3039299	-87299046	+	MIR	SINE	MIR	1	175	-87	1
1445	chr16	3697084	3697085	chunk0073_71_1	86.42906	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	3697026	3697381	-86640964	-	L1ME4b	LINE	L1	-527	365	1	1
1446	chr16	3868849	3868850	chunk0073_79_1	9.89432	AR_DHT_Control	chr16	3868630	3868900	-86469445	+	L2a	LINE	L2	3100	3426	0	1
1447	chr16	4428757	4428758	chunk0073_96_1	10.179	AR_DHT_Control	chr16	4428755	4428882	-85909463	+	AluJo	SINE	Alu	1	125	-187	1
1448	chr16	22614860	22614861	chunk0074_118_1	5.60881	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	22614281	22614888	-67723457	-	LTR53-int	LTR	ERVL	0	3556	2506	1
1449	chr16	22727693	22727694	chunk0074_133_1	70.05885	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	22727548	22727704	-67610641	-	L2a	LINE	L2	0	3426	3229	1
1450	chr16	24069174	24069175	chunk0074_181_1	27.92607	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	24068955	24069181	-66269164	-	MIR	SINE	MIR	0	262	8	1
1451	chr16	24851809	24851810	chunk0074_191_1	14.0295	AR_DHT_Control	chr16	24851665	24851866	-65486479	-	MIR	SINE	MIR	-43	219	17	1
1452	chr16	20303183	20303184	chunk0074_20_1	7.12934	AR_DHT_Control	chr16	20303075	20303198	-70035147	+	MIRb	SINE	MIR	21	145	-123	1
1453	chr16	27104074	27104075	chunk0074_227_1	6.04605	AR_DHT_Control	chr16	27103814	27104159	-63234186	+	MLT1I	LTR	ERVL-MaLR	8	411	0	1
1454	chr16	27354844	27354845	chunk0074_237_1	5.86499	AR_DHT_Control	chr16	27354794	27354936	-62983409	+	L2c	LINE	L2	3226	3383	-4	1
1455	chr16	28089585	28089586	chunk0074_259_1	6.73207	AR_DHT_Control	chr16	28088778	28090021	-62248324	+	(AC)n	Simple_repeat	Simple_repeat	1	1324	0	1
1456	chr16	20426650	20426651	chunk0074_26_1	56.4818	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	20426451	20426938	-69911407	+	L1MB3	LINE	L1	5687	6175	-8	1
1457	chr16	29838145	29838146	chunk0074_296_1	10.6691	AR_DHT_Control	chr16	29838137	29838151	-60500194	+	L1MB7	LINE	L1	5725	5738	-446	1
1458	chr16	30445788	30445789	chunk0074_311_1	5.69103	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	30445763	30445827	-59892518	-	LTR83	LTR	ERVL	-151	629	565	1
1459	chr16	31452570	31452571	chunk0074_339_1	5.6503	AR_DHT_Control	chr16	31452458	31452594	-58885751	-	Tigger15a	DNA	TcMar-Tigger	-553	162	34	1
1460	chr16	31557365	31557366	chunk0074_344_1	9.19742	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	31556621	31557760	-58780585	+	L1PA15-16	LINE	L1	53	1188	-5665	1
1461	chr16	33337844	33337845	chunk0074_347_1	8.0483	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	33335926	33340033	-56998312	+	(TGGCTTGGC)n	Simple_repeat	Simple_repeat	1	4327	0	1
1462	chr16	33339908	33339909	chunk0074_348_1	62.7269	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr16	33335926	33340033	-56998312	+	(TGGCTTGGC)n	Simple_repeat	Simple_repeat	1	4327	0	1
1463	chr16	34573061	34573062	chunk0074_360_1	268.1784	AR_DHT_Control;Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	34571579	34576219	-55762126	+	(GAATG)n	Satellite	Satellite	1	4722	0	1
1464	chr16	34574225	34574226	chunk0074_361_1	69.8855	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr16	34571579	34576219	-55762126	+	(GAATG)n	Satellite	Satellite	1	4722	0	1
1465	chr16	35177989	35177990	chunk0074_385_1	6.93299	AR_DHT_Control	chr16	35177797	35178028	-55160317	+	L1PA15-16	LINE	L1	1269	1507	-5346	1
1466	chr16	20695176	20695177	chunk0074_40_1	58.9058	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	20695161	20695275	-69643070	+	MIRb	SINE	MIR	5	121	-147	1
1467	chr16	22007547	22007548	chunk0074_88_1	6.98722	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	22006872	22007647	-68330698	+	L2a	LINE	L2	2507	3419	-7	1
1468	chr16	48668052	48668053	chunk0075_106_1	17.3925	AR_DHT_Control	chr16	48666607	48668775	-41669570	-	L1PA6	LINE	L1	-3986	2198	6	1
1469	chr16	50162049	50162050	chunk0075_130_1	11.022	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	50161639	50162519	-40175826	-	L1MD2	LINE	L1	0	6359	5443	1
1470	chr16	46831267	46831268	chunk0075_15_1	6.6833	AR_DHT_Control	chr16	46831258	46831293	-43507052	+	(GC)n	Simple_repeat	Simple_repeat	1	35	0	1
1471	chr16	51683978	51683979	chunk0075_159_1	81.9154	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	51683836	51684613	-38653732	+	LTR39	LTR	ERV1	1	783	0	1
1472	chr16	52439436	52439437	chunk0075_193_1	5.77762	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	52439380	52439641	-37898704	+	(CTG)n	Simple_repeat	Simple_repeat	1	263	0	1
1473	chr16	52898427	52898428	chunk0075_228_1	75.049	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	52898425	52898603	-37439742	+	L1M7	LINE	L1	2787	2975	-3239	1
1474	chr16	53045905	53045906	chunk0075_236_1	11.60932	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	53045703	53045921	-37292424	-	MIRb	SINE	MIR	-54	214	4	1
1475	chr16	53794039	53794040	chunk0075_273_1	16.12105	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	53793882	53794237	-36544108	+	L1M5	LINE	L1	5294	5667	-457	1
1476	chr16	54848570	54848571	chunk0075_335_1	6.80366	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	54848410	54848696	-35489649	-	MLT1I	LTR	ERVL-MaLR	-6	405	123	1
1477	chr16	55911381	55911382	chunk0075_352_1	12.0416	AR_DHT_Control	chr16	55911136	55911436	-34426909	-	MLT1J	LTR	ERVL-MaLR	-149	363	1	1
1478	chr16	56373268	56373269	chunk0075_368_1	38.89425	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	56373024	56373885	-33964460	+	L1MC1	LINE	L1	243	1154	-5354	1
1479	chr16	56967970	56967971	chunk0075_404_1	90.2133	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	56967765	56967990	-33370355	+	AluJo	SINE	Alu	87	312	0	1
1480	chr16	47916466	47916467	chunk0075_66_1	7.36432	AR_DHT_Control	chr16	47916045	47916989	-42421356	+	L1ME2z	LINE	L1	5175	6164	-280	1
1481	chr16	48383967	48383968	chunk0075_94_1	5.56714	AR_DHT_Control	chr16	48383903	48384130	-41954215	-	MIR	SINE	MIR	-2	260	17	1
1482	chr16	66988304	66988305	chunk0076_138_1	4.84918	AR_DHT_Control	chr16	66988134	66988310	-23350035	+	L2b	LINE	L2	3082	3278	-97	1
1483	chr16	58736225	58736226	chunk0076_14_1	13.63002	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	58736125	58736716	-31601629	+	LTR10C	LTR	ERV1	1	591	0	1
1484	chr16	67624439	67624440	chunk0076_182_1	22.6427	AR_DHT_Control	chr16	67624225	67624584	-22713761	+	L2	LINE	L2	1858	2202	-1217	1
1485	chr16	58789035	58789036	chunk0076_19_1	35.97637	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	58788654	58789337	-31549008	-	L1MEc	LINE	L1	-5613	787	92	1
1486	chr16	68885866	68885867	chunk0076_233_1	14.2738	AR_DHT_Control	chr16	68885673	68886218	-21452127	-	L1MB8	LINE	L1	-309	5869	5323	1
1487	chr16	69763715	69763716	chunk0076_287_1	29.1388	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	69763682	69763820	-20574525	+	L2c	LINE	L2	3245	3387	0	1
1488	chr16	69910253	69910254	chunk0076_298_1	132.4876	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	69910154	69910319	-20428026	-	L1MC5a	LINE	L1	-161	2616	2430	1
1489	chr16	59373479	59373480	chunk0076_31_1	6.59306	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	59372029	59375130	-30963215	-	L1MD1	LINE	L1	-12	6621	3428	1
1490	chr16	70715297	70715298	chunk0076_326_1	6.20286	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	70715164	70715474	-19622871	+	L2b	LINE	L2	3028	3369	-6	1
1491	chr16	72001740	72001741	chunk0076_366_1	93.1564	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	72001424	72001967	-18336378	-	Charlie29a	DNA	hAT-Charlie	-135	584	1	1
1492	chr16	59729398	59729399	chunk0076_37_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	59728705	59731354	-30606991	+	L1PA13	LINE	L1	11	2643	-4123	1
1493	chr16	72156800	72156801	chunk0076_371_1	9.21264	AR_DHT_Control	chr16	72156633	72156811	-18181534	-	L1ME1	LINE	L1	-346	5833	5657	1
1494	chr16	72413170	72413171	chunk0076_385_1	27.13835	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	72413142	72413229	-17925116	+	AluYj4	SINE	Alu	225	311	0	1
1495	chr16	73991094	73991095	chunk0076_447_1	4.84918	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	73990752	73991549	-16346796	-	LTR1E	LTR	ERV1	0	804	2	1
1496	chr16	60158451	60158452	chunk0076_46_1	6.48643	AR_DHT_Control	chr16	60158400	60158564	-30179781	+	MER5A1	DNA	hAT-Charlie	2	165	-1	1
1497	chr16	58492682	58492683	chunk0076_5_1	20.4276	AR_DHT_Control	chr16	58492558	58492726	-31845619	-	AluJo	SINE	Alu	-31	281	119	1
1498	chr16	63506237	63506238	chunk0076_76_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	63505662	63506565	-26831780	+	L1MA10	LINE	L1	639	1610	-5169	1
1499	chr16	64782761	64782762	chunk0076_89_1	71.7359	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	64782001	64783395	-25554950	-	L1MC1	LINE	L1	0	6333	4970	1
1500	chr16	65773331	65773332	chunk0076_99_1	22.45956	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	65773254	65773383	-24564962	-	MIRb	SINE	MIR	-62	206	67	1
1501	chr16	78692920	78692921	chunk0077_141_1	8.18895	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	78692733	78692945	-11645400	+	Charlie16a	DNA	hAT-Charlie	4	215	-127	1
1502	chr16	79888274	79888275	chunk0077_206_1	93.0036	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	79888130	79888405	-10449940	+	AmnSINE1	SINE	5S-Deu-L2	225	550	-25	1
1503	chr16	80672369	80672370	chunk0077_238_1	5.75839	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	80672353	80672377	-9665968	+	(GA)n	Simple_repeat	Simple_repeat	1	24	0	1
1504	chr16	80718402	80718403	chunk0077_242_1	5.78771	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	80718357	80718524	-9619821	-	MIRb	SINE	MIR	-57	211	27	1
1505	chr16	80909966	80909967	chunk0077_257_1	82.1926	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	80909908	80909999	-9428346	+	Charlie22a	DNA	hAT-Charlie	378	471	-20	1
1506	chr16	81067383	81067384	chunk0077_276_1	46.755	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	81067277	81067428	-9270917	+	L1MC5	LINE	L1	9131	9291	-13	1
1507	chr16	81213401	81213402	chunk0077_282_1	19.2046	AR_DHT_Control	chr16	81213265	81213563	-9124782	+	L1ME3Cz	LINE	L1	392	697	-300	1
1508	chr16	82016404	82016405	chunk0077_310_1	18.56424	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	82016376	82016818	-8321527	-	LTR16C	LTR	ERVL	0	489	17	1
1509	chr16	75462597	75462598	chunk0077_37_1	29.08244	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	75462507	75462981	-14875364	+	L1MC4	LINE	L1	7408	7891	-151	1
1510	chr16	84511584	84511585	chunk0077_371_1	4.9436	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	84511579	84512143	-5826202	-	L1MC3	LINE	L1	-20	7765	7174	1
1511	chr16	84722133	84722134	chunk0077_385_1	31.84873	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	84721995	84722569	-5615776	-	L1ME1	LINE	L1	-73	6106	5487	1
1512	chr16	84823350	84823351	chunk0077_394_1	10.4948	AR_DHT_Control	chr16	84822846	84823431	-5514914	-	L1MB7	LINE	L1	-10	6174	5584	1
1513	chr16	85770857	85770858	chunk0077_446_1	11.1716	AR_DHT_Control	chr16	85770511	85771112	-4567233	+	L1ME3	LINE	L1	5488	6165	-8	1
1514	chr16	85867959	85867960	chunk0077_450_1	7.82111	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	85867809	85868217	-4470128	+	MER83	LTR	ERV1	3	448	0	1
1515	chr16	76794547	76794548	chunk0077_63_1	14.63622	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	76794407	76794564	-13543781	-	AluSc8	SINE	Alu	-11	300	143	1
1516	chr17	2955331	2955332	chunk0078_121_1	7.83165	AR_DHT_Control	chr17	2954896	2955590	-80301851	-	L1MB5	LINE	L1	-284	5890	5182	1
1517	chr17	3895191	3895192	chunk0078_143_1	5.21805	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	3895035	3895359	-79362082	-	L2b	LINE	L2	-1266	2153	1826	1
1518	chr17	144072	144073	chunk0078_2_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	144062	144111	-83113330	+	(GGCGCGGC)n	Simple_repeat	Simple_repeat	1	51	0	1
1519	chr17	5306202	5306203	chunk0078_202_1	7.36432	AR_DHT_Control	chr17	5306053	5306237	-77951204	-	Tigger5b	DNA	TcMar-Tigger	-2	470	270	1
1520	chr17	5436405	5436406	chunk0078_208_1	36.2119	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	5436339	5436737	-77820704	+	L1MB7	LINE	L1	4936	5308	-838	1
1521	chr17	6233582	6233583	chunk0078_217_1	4.46365	SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	6233390	6233692	-77023749	+	(AC)n	Simple_repeat	Simple_repeat	1	302	0	1
1522	chr17	6445664	6445665	chunk0078_222_1	6.20921	SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	6445614	6445813	-76811628	-	L2c	LINE	L2	-125	3262	3058	1
1523	chr17	6512849	6512850	chunk0078_225_1	43.61552	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	6512718	6512938	-76744503	+	LTR86A1	LTR	ERVL	27	252	-261	1
1524	chr17	6672682	6672683	chunk0078_233_1	9.8425	AR_DHT_Control	chr17	6672584	6672775	-76584666	-	L1ME4a	LINE	L1	-218	5906	5695	1
1525	chr17	8611373	8611374	chunk0078_329_1	43.7623	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	8611023	8611377	-74646064	+	L1ME3B	LINE	L1	549	911	-5504	1
1526	chr17	8614907	8614908	chunk0078_331_1	6.69534	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	8614616	8615011	-74642430	+	L1ME3B	LINE	L1	3045	3611	-2708	1
1527	chr16	86180721	86180722	chunk0078_344_1	5.56779	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	86180598	86181190	-4157155	+	(CA)n	Simple_repeat	Simple_repeat	1	607	0	1
1528	chr16	86424278	86424279	chunk0078_348_1	29.0253	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	86424153	86424475	-3913870	-	MER58B	DNA	hAT-Charlie	-3	338	2	1
1529	chr16	86657998	86657999	chunk0078_352_1	4.75321	AR_DHT_Control	chr16	86657861	86658068	-3680277	-	Charlie1a	DNA	hAT-Charlie	-1207	248	36	1
1530	chr16	87369476	87369477	chunk0078_365_1	10.4518	AR_DHT_Control	chr16	87369171	87369777	-2968568	-	L1MB3	LINE	L1	-1	6182	5547	1
1531	chr16	87616807	87616808	chunk0078_376_1	17.33585	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	87616560	87616942	-2721403	-	L1MD1	LINE	L1	0	6242	5819	1
1532	chr16	89240904	89240905	chunk0078_414_1	7.29092	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	89240833	89240911	-1097434	+	L1MEf	LINE	L1	5357	5425	-1119	1
1533	chr16	89375018	89375019	chunk0078_424_1	7.24914	AR_DHT_Control	chr16	89374790	89375298	-963047	+	Tigger2b_Pri	DNA	TcMar-Tigger	2	541	-527	1
1534	chr16	89535080	89535081	chunk0078_441_1	12.5164	AR_DHT_Control	chr16	89535060	89535172	-803173	-	L1MD3	LINE	L1	-488	7554	7436	1
1535	chr16	89609877	89609878	chunk0078_443_1	12.1886	AR_DHT_Control	chr16	89609665	89609887	-728458	+	AluSx	SINE	Alu	86	308	-4	1
1536	chr16	89803156	89803157	chunk0078_448_1	6.48643	AR_DHT_Control	chr16	89802702	89803176	-535169	+	L1MA5A	LINE	L1	5815	6286	-11	1
1537	chr17	1413537	1413538	chunk0078_53_1	11.022	AR_DHT_Control	chr17	1413277	1413630	-81843811	+	MLT1H	LTR	ERVL-MaLR	153	547	-2	1
1538	chr17	1491549	1491550	chunk0078_63_1	6.14829	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	1491528	1491590	-81765851	+	(GCTCCCC)n	Simple_repeat	Simple_repeat	1	66	0	1
1539	chr17	1669747	1669748	chunk0078_76_1	5.3309	SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	1669404	1670479	-81586962	+	L2	LINE	L2	1708	2690	-729	1
1540	chr17	12404685	12404686	chunk0079_115_1	7.3092	AR_DHT_Control	chr17	12404584	12404861	-70852580	-	L2c	LINE	L2	-177	3198	2920	1
1541	chr17	13311470	13311471	chunk0079_156_1	13.04054	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	13311205	13311512	-69945929	+	HAL1ME	LINE	L1	11	297	-2168	1
1542	chr17	14886371	14886372	chunk0079_216_1	10.651	SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	14885151	14887632	-68369809	-	L1PA15-16	LINE	L1	-4130	2723	4	1
1543	chr17	15928897	15928898	chunk0079_237_1	7.3267	SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	15928568	15929296	-67328145	-	L2a	LINE	L2	-2408	1011	275	1
1544	chr17	16069668	16069669	chunk0079_244_1	10.0617	AR_DHT_Control	chr17	16069599	16069852	-67187589	-	MIR	SINE	MIR	-3	259	4	1
1545	chr17	17460154	17460155	chunk0079_328_1	6.03438	SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	17460009	17460400	-65797041	+	(CCATCA)n	Simple_repeat	Simple_repeat	1	408	0	1
1546	chr17	17662566	17662567	chunk0079_337_1	10.1061	AR_DHT_Control	chr17	17662491	17662587	-65594854	-	L1ME1	LINE	L1	-353	5826	5731	1
1547	chr17	18055728	18055729	chunk0079_370_1	24.50036	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	18055468	18055780	-65201661	-	AluJr	SINE	Alu	0	312	10	1
1548	chr17	18303727	18303728	chunk0079_380_1	64.1056	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	18302963	18303938	-64953503	+	LTR5B	LTR	ERVK	1	998	-4	1
1549	chr17	18936683	18936684	chunk0079_389_1	8.27376	AR_DHT_Control	chr17	18936476	18936771	-64320670	+	L1MB5	LINE	L1	5488	5787	-387	1
1550	chr17	19402529	19402530	chunk0079_402_1	29.87797	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr17	19402476	19402563	-63854878	+	L2c	LINE	L2	3284	3360	-15	1
1551	chr17	19942813	19942814	chunk0079_431_1	53.90468	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	19942712	19942848	-63314593	+	L2	LINE	L2	1269	1418	-2001	1
1552	chr17	20191287	20191288	chunk0079_445_1	189.7291	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	20190857	20191491	-63065950	-	L1MC1	LINE	L1	-317	6016	5386	1
1553	chr17	26938121	26938122	chunk0080_102_1	32.40049	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr17	26938005	26938444	-56318997	+	(GAATG)n	Satellite	Satellite	3	440	0	1
1554	chr17	26939343	26939344	chunk0080_104_1	35.91065	AR_DHT_Control;Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	26939288	26939351	-56318090	+	AluSz6	SINE	Alu	225	289	-23	1
1555	chr17	26940476	26940477	chunk0080_106_1	10.1818	SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	26940460	26941027	-56316414	+	(GAATG)n	Satellite	Satellite	4	569	0	1
1556	chr17	27136806	27136807	chunk0080_116_1	5.64811	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	27136252	27136904	-56120537	+	L1ME2	LINE	L1	3530	4239	-1907	1
1557	chr17	27415236	27415237	chunk0080_134_1	248.3415	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	27415158	27415277	-55842164	+	L2c	LINE	L2	3280	3387	0	1
1558	chr17	27437705	27437706	chunk0080_135_1	6.14829	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	27437608	27437842	-55819599	+	AluJb	SINE	Alu	88	311	-1	1
1559	chr17	27506381	27506382	chunk0080_141_1	7.38582	AR_DHT_Control	chr17	27506166	27506429	-55751012	+	MIRb	SINE	MIR	1	268	0	1
1560	chr17	30412240	30412241	chunk0080_252_1	11.1716	AR_DHT_Control	chr17	30406814	30413023	-52844418	-	L1PA6	LINE	L1	0	6154	5	1
1561	chr17	31186977	31186978	chunk0080_280_1	31.5037	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	31185328	31187197	-52070244	+	HERVL-int	LTR	ERVL	2664	4546	-1108	1
1562	chr17	31195498	31195499	chunk0080_281_1	14.11082	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	31195381	31195734	-52061707	-	L1MB2	LINE	L1	-10	6161	5797	1
1563	chr17	31550125	31550126	chunk0080_298_1	17.62868	SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh	chr17	31550073	31550145	-51707296	+	tRNA-Thr-ACG	tRNA	tRNA	1	72	-3	1
1564	chr17	32854573	32854574	chunk0080_352_1	19.43039	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	32854454	32854644	-50402797	-	Tigger19a	DNA	TcMar-Tigger	-1	322	125	1
1565	chr17	21219035	21219036	chunk0080_40_1	218.857	Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	21218650	21219282	-62038159	-	L1ME4b	LINE	L1	-11	881	186	1
1566	chr17	36074439	36074440	chunk0080_437_1	24.18994	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	36074286	36074651	-47182790	+	MER58B	DNA	hAT-Charlie	1	337	-4	1
1567	chr17	21664026	21664027	chunk0080_52_1	6.49645	SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	21663840	21664357	-61593084	+	(GATGAT)n	Simple_repeat	Simple_repeat	1	519	0	1
1568	chr17	21863209	21863210	chunk0080_58_1	25.8176	SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh	chr17	21851151	21889310	-61368131	+	(AATGG)n	Simple_repeat	Simple_repeat	1	38178	0	1
1569	chr17	21969657	21969658	chunk0080_62_1	32.89269	AR_DHT_Control;Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	21943261	21983441	-61274000	+	(ATGGA)n	Simple_repeat	Simple_repeat	1	40809	0	1
1570	chr17	21973181	21973182	chunk0080_65_1	36.792	Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr17	21943261	21983441	-61274000	+	(ATGGA)n	Simple_repeat	Simple_repeat	1	40809	0	1
1571	chr17	21987706	21987707	chunk0080_68_1	8.04363	Merged_Lncap_AR_Veh	chr17	21985158	21992022	-61265419	+	(TGGAA)n	Simple_repeat	Simple_repeat	1	7012	0	1
1572	chr17	21988706	21988707	chunk0080_69_1	26.5596	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	21985158	21992022	-61265419	+	(TGGAA)n	Simple_repeat	Simple_repeat	1	7012	0	1
1573	chr17	21991893	21991894	chunk0080_70_1	12.0793	AR_DHT_Control	chr17	21985158	21992022	-61265419	+	(TGGAA)n	Simple_repeat	Simple_repeat	1	7012	0	1
1574	chr17	20876437	20876438	chunk0080_8_1	28.42491	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	20876369	20876733	-62380708	+	MLT1A1	LTR	ERVL-MaLR	1	404	-4	1
1575	chr17	22154412	22154413	chunk0080_80_1	11.69966	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	22154148	22155161	-61102280	+	L1MB4	LINE	L1	5129	6179	-1	1
1576	chr17	25788698	25788699	chunk0080_85_1	10.1791	AR_DHT_Control	chr17	25736048	25919281	-57338160	+	ALR/Alpha	Satellite	centr	1	184845	0	1
1577	chr17	25920201	25920202	chunk0080_86_1	34.1606	SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh	chr17	25920037	25999999	-57257442	+	ALR/Alpha	Satellite	centr	1	80697	0	1
1578	chr17	20880200	20880201	chunk0080_9_1	9.31879	AR_DHT_Control	chr17	20880131	20880281	-62377160	+	L2c	LINE	L2	3184	3339	-48	1
1579	chr17	26619983	26619984	chunk0080_90_1	23.9467	Merged_Lncap_AR_Veh	chr17	26616267	26627010	-56630431	+	ALR/Alpha	Satellite	centr	1	10797	0	1
1580	chr17	26854877	26854878	chunk0080_95_1	36.6496	SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr17	26831998	26860262	-56397179	+	(TGGAA)n	Simple_repeat	Simple_repeat	1	28282	0	1
1581	chr17	26870465	26870466	chunk0080_96_1	14.7725	AR_DHT_Control	chr17	26860262	26876740	-56380701	+	(GAATG)n	Satellite	Satellite	1	16640	0	1
1582	chr17	26879255	26879256	chunk0080_97_1	16.80204	Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	26878920	26879385	-56378056	+	(TGGAA)n	Simple_repeat	Simple_repeat	4	470	0	1
1583	chr17	26885741	26885742	chunk0080_99_1	78.0672	SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	26880356	26885980	-56371461	-	ALR/Alpha	Satellite	centr	-26	5644	1	1
1584	chr17	39981116	39981117	chunk0081_110_1	4.36616	AR_DHT_Control	chr17	39981110	39981152	-43276289	+	(GACGGCA)n	Simple_repeat	Simple_repeat	1	45	0	1
1585	chr17	41484429	41484430	chunk0081_171_1	57.994	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	41484411	41484479	-41772962	-	L3	LINE	CR1	-123	3976	3907	1
1586	chr17	41663773	41663774	chunk0081_179_1	6.86821	SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	41663578	41663971	-41593470	-	L2a	LINE	L2	0	3426	2918	1
1587	chr17	37315805	37315806	chunk0081_19_1	118.5588	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	37315352	37316131	-45941310	-	MER21C	LTR	ERVL	-33	905	1	1
1588	chr17	42541352	42541353	chunk0081_211_1	126.6054	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	42541316	42541371	-40716070	-	MIRc	SINE	MIR	-25	243	191	1
1589	chr17	42644005	42644006	chunk0081_220_1	8.40061	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	42643944	42644104	-40613337	+	AluJb	SINE	Alu	135	291	-21	1
1590	chr17	42833488	42833489	chunk0081_231_1	5.36932	AR_DHT_Control	chr17	42833430	42833522	-40423919	+	(GCGA)n	Simple_repeat	Simple_repeat	1	97	0	1
1591	chr17	42990178	42990179	chunk0081_245_1	6.04153	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	42990132	42990206	-40267235	-	L2b	LINE	L2	-1	3425	3313	1
1592	chr17	43316235	43316236	chunk0081_251_1	5.59431	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	43316222	43316353	-39941088	-	AluJr4	SINE	Alu	-6	306	174	1
1593	chr17	43326523	43326524	chunk0081_253_1	14.13586	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	43325133	43331647	-39925794	-	HERVK13-int	LTR	ERVK	0	8116	1070	1
1594	chr17	43357199	43357200	chunk0081_257_1	8.36735	AR_DHT_Control	chr17	43357143	43357500	-39899941	-	PRIMA41-int	LTR	ERV1	-5140	2616	2315	1
1595	chr17	44689975	44689976	chunk0081_289_1	4.96796	SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	44689916	44690110	-38567331	-	MIRb	SINE	MIR	-47	221	3	1
1596	chr17	45577113	45577114	chunk0081_306_1	16.74158	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	45576624	45577208	-37680233	+	LTR10C	LTR	ERV1	1	591	0	1
1597	chr17	46018299	46018300	chunk0081_317_1	48.6668	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	46018215	46018446	-37238995	+	MamRep434	DNA	TcMar-Tigger	59	326	-100	1
1598	chr17	46057399	46057400	chunk0081_320_1	22.1478	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	46057137	46057683	-37199758	+	L1MC5	LINE	L1	8148	8741	-563	1
1599	chr17	46166758	46166759	chunk0081_326_1	12.96412	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	46166739	46166999	-37090442	-	L4_A_Mam	LINE	RTE-X	-198	4792	4508	1
1600	chr17	47649916	47649917	chunk0081_355_1	7.92341	AR_DHT_Control	chr17	47649891	47649972	-35607469	+	(TCCC)n	Simple_repeat	Simple_repeat	1	82	0	1
1601	chr17	48760765	48760766	chunk0081_421_1	12.1764	AR_DHT_Control	chr17	48760733	48760880	-34496561	-	MER45A	DNA	hAT-Tip100	0	178	16	1
1602	chr17	37803225	37803226	chunk0081_49_1	32.81672	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr17	37802631	37803446	-45453995	-	MLT1K-int	LTR	ERVL-MaLR	-19	1368	514	1
1603	chr17	38257325	38257326	chunk0081_50_1	4.32388	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	38257285	38257356	-45000085	+	GA-rich	Low_complexity	Low_complexity	1	75	0	1
1604	chr17	38560891	38560892	chunk0081_55_1	6.93299	AR_DHT_Control	chr17	38560869	38560921	-44696520	-	MamRTE1	LINE	RTE-BovB	-2739	1073	1022	1
1605	chr17	39209479	39209480	chunk0081_76_1	78.77766	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	39209371	39209520	-44047921	+	MIRb	SINE	MIR	88	247	-21	1
1606	chr17	54833111	54833112	chunk0082_110_1	22.13585	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	54832913	54833553	-28423888	+	L1ME3	LINE	L1	5532	6154	-8	1
1607	chr17	54969929	54969930	chunk0082_115_1	13.8639	AR_DHT_Control	chr17	54969736	54970413	-28287028	-	L2a	LINE	L2	-6	3420	2689	1
1608	chr17	55484735	55484736	chunk0082_147_1	5.00158	AR_DHT_Control	chr17	55484170	55485265	-27772176	+	L1MC5a	LINE	L1	1696	2773	-4	1
1609	chr17	56853517	56853518	chunk0082_202_1	5.6503	AR_DHT_Control	chr17	56853072	56853654	-26403787	-	L1MA7	LINE	L1	-765	5378	4796	1
1610	chr17	56854185	56854186	chunk0082_203_1	13.29686	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	56853659	56854308	-26403133	+	L1MA7	LINE	L1	5489	6131	-160	1
1611	chr17	56927175	56927176	chunk0082_207_1	8.76676	AR_DHT_Control	chr17	56926504	56927659	-26329782	+	MER4-int	LTR	ERV1	682	2212	-4386	1
1612	chr17	50698701	50698702	chunk0082_26_1	10.5437	AR_DHT_Control	chr17	50698685	50698858	-32558583	+	L1MC4	LINE	L1	7680	7815	-227	1
1613	chr17	58023177	58023178	chunk0082_280_1	324.9418	SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	58023010	58023310	-25234131	-	LTR67B	LTR	ERVL	-36	584	305	1
1614	chr17	59101161	59101162	chunk0082_307_1	13.47118	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	59101130	59101166	-24156275	+	L2a	LINE	L2	3390	3425	-1	1
1615	chr17	59127278	59127279	chunk0082_312_1	7.10486	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	59127256	59127348	-24130093	+	FLAM_C	SINE	Alu	21	100	-33	1
1616	chr17	59643667	59643668	chunk0082_328_1	12.5159	AR_DHT_Control	chr17	59643457	59643712	-23613729	+	L2c	LINE	L2	2814	3087	-300	1
1617	chr17	60037435	60037436	chunk0082_350_1	6.49378	SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	60037039	60038031	-23219410	-	L1MD2	LINE	L1	-5514	1126	54	1
1618	chr17	60342388	60342389	chunk0082_367_1	17.4573	AR_DHT_Control	chr17	60341533	60343056	-22914385	-	L1P2	LINE	L1	-4651	1533	7	1
1619	chr17	60356209	60356210	chunk0082_371_1	15.93595	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	60355860	60357011	-22900430	+	L1M4	LINE	L1	164	1341	-6176	1
1620	chr17	60764591	60764592	chunk0082_395_1	12.1886	AR_DHT_Control	chr17	60761215	60767330	-22490111	-	L1PA6	LINE	L1	-3	6151	4	1
1621	chr17	49678059	49678060	chunk0082_4_1	4.83532	AR_DHT_Control	chr17	49678021	49678084	-33579357	+	(AC)n	Simple_repeat	Simple_repeat	1	63	0	1
1622	chr17	61014424	61014425	chunk0082_410_1	6.18182	AR_DHT_Control	chr17	61014316	61014589	-22242852	+	L1MC	LINE	L1	4735	5005	-1141	1
1623	chr17	61504120	61504121	chunk0082_432_1	7.43227	AR_DHT_Control	chr17	61503553	61504273	-21753168	-	Tigger3b	DNA	TcMar-Tigger	-461	770	20	1
1624	chr17	54554419	54554420	chunk0082_99_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	54553425	54555865	-28701576	-	L1MA5	LINE	L1	-5192	2374	411	1
1625	chr17	65035352	65035353	chunk0083_123_1	13.41336	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	65035345	65035504	-18221937	+	L1ME4a	LINE	L1	5854	6039	-85	1
1626	chr17	65931995	65931996	chunk0083_155_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	65931170	65932481	-17324960	+	L1MA7	LINE	L1	1216	2539	-4957	1
1627	chr17	65986960	65986961	chunk0083_161_1	56.0026	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	65986097	65987431	-17270010	+	L1M6	LINE	L1	12	1347	-5149	1
1628	chr17	65990570	65990571	chunk0083_163_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	65990226	65990955	-17266486	+	L1M1	LINE	L1	19	776	-6789	1
1629	chr17	66144044	66144045	chunk0083_168_1	5.6425	AR_DHT_Control	chr17	66143098	66144082	-17113359	+	MLT1F2-int	LTR	ERVL-MaLR	291	1309	-180	1
1630	chr17	66474997	66474998	chunk0083_187_1	11.9502	AR_DHT_Control	chr17	66474947	66475586	-16781855	-	L3	LINE	CR1	-199	3900	3193	1
1631	chr17	67511097	67511098	chunk0083_234_1	19.22774	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	67510995	67511512	-15745929	-	L1ME3G	LINE	L1	-267	657	233	1
1632	chr17	68647305	68647306	chunk0083_281_1	33.17987	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	68647167	68647668	-14609773	-	LTR22B	LTR	ERVK	-4	488	2	1
1633	chr17	69269440	69269441	chunk0083_296_1	24.41685	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	69269429	69270101	-13987340	+	L1MB8	LINE	L1	5526	6172	-6	1
1634	chr17	69498831	69498832	chunk0083_315_1	31.03045	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	69498693	69499088	-13758353	-	MER54B	LTR	ERVL	-483	418	1	1
1635	chr17	70095563	70095564	chunk0083_331_1	24.01498	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	70095222	70095676	-13161765	+	MER89	LTR	ERV1	1	559	0	1
1636	chr17	70192937	70192938	chunk0083_335_1	8.35315	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	70192719	70193175	-13064266	-	L1M5	LINE	L1	-3419	2727	2248	1
1637	chr17	70421091	70421092	chunk0083_354_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	70420702	70421128	-12836313	-	ERV3-16A3_I-int	LTR	ERVL	-843	4383	3871	1
1638	chr17	70617590	70617591	chunk0083_360_1	6.98682	SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	70617294	70617610	-12639831	+	LTR78	LTR	ERV1	70	406	-898	1
1639	chr17	64255086	64255087	chunk0083_85_1	27.7264	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	64254857	64255164	-19002277	-	AluJr	SINE	Alu	-8	304	1	1
1640	chr18	108427	108428	chunk0084_1_1	27.1768	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	105673	111670	-80261615	-	BSR/Beta	Satellite	Satellite	-42	5974	1	1
1641	chr17	77852132	77852133	chunk0084_188_1	5.48709	AR_DHT_Control	chr17	77851891	77852499	-5404942	+	(TG)n	Simple_repeat	Simple_repeat	1	611	0	1
1642	chr17	77981869	77981870	chunk0084_192_1	5.6425	AR_DHT_Control	chr17	77981686	77981902	-5275539	+	MER58A	DNA	hAT-Charlie	8	223	-1	1
1643	chr17	78651501	78651502	chunk0084_228_1	11.3067	AR_DHT_Control	chr17	78651435	78651747	-4605694	+	L1ME3G	LINE	L1	41	200	-724	1
1644	chr17	78763533	78763534	chunk0084_240_1	35.16041	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	78763429	78763768	-4493673	-	MER44A	DNA	TcMar-Tigger	-1	338	7	1
1645	chr17	73564989	73564990	chunk0084_28_1	17.59046	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	73564940	73565638	-9691803	+	L1MEb	LINE	L1	153	1236	-1343	1
1646	chr17	79906429	79906430	chunk0084_286_1	4.74993	AR_DHT_Control	chr17	79906009	79906563	-3350878	-	ERV3-16A3_I-int	LTR	ERVL	-2858	2138	1503	1
1647	chr17	79925207	79925208	chunk0084_291_1	4.76227	AR_DHT_Control	chr17	79925117	79925330	-3332111	-	MIRb	SINE	MIR	0	268	55	1
1648	chr17	73704594	73704595	chunk0084_32_1	5.58563	SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	73704381	73704907	-9552534	+	MLT1H1	LTR	ERVL-MaLR	1	552	-3	1
1649	chr17	80896810	80896811	chunk0084_328_1	18.7845	AR_DHT_Control	chr17	80896643	80896888	-2360553	-	L1M5	LINE	L1	-1449	4697	4444	1
1650	chr17	80930252	80930253	chunk0084_329_1	11.7522	SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	80929971	80930312	-2327129	+	(CTCAG)n	Simple_repeat	Simple_repeat	1	313	0	1
1651	chr17	81793528	81793529	chunk0084_376_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	81792543	81793663	-1463778	+	(CA)n	Simple_repeat	Simple_repeat	1	1175	0	1
1652	chr17	82259282	82259283	chunk0084_408_1	6.42963	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	82258870	82259399	-998042	-	L1M5	LINE	L1	-1366	4780	4174	1
1653	chr17	82502334	82502335	chunk0084_422_1	9.21264	AR_DHT_Control	chr17	82502298	82502473	-754968	-	L1MC3	LINE	L1	-1009	6776	6597	1
1654	chr17	82507939	82507940	chunk0084_423_1	7.36432	AR_DHT_Control	chr17	82507499	82507971	-749470	+	LOR1a	LTR	ERV1	1	497	0	1
1655	chr17	74137706	74137707	chunk0084_44_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	74137191	74138047	-9119394	+	L1ME2	LINE	L1	292	1202	-5416	1
1656	chr17	83046714	83046715	chunk0084_451_1	47.6582	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	83046436	83047055	-210386	+	L1MB5	LINE	L1	6227	6844	-190	1
1657	chr18	110895	110896	chunk0084_5_1	8.96809	Merged_Lncap_AR_Veh	chr18	105673	111670	-80261615	-	BSR/Beta	Satellite	Satellite	-42	5974	1	1
1658	chr17	74514215	74514216	chunk0084_58_1	23.59116	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	74514142	74514815	-8742626	+	(TGACAGG)n	Simple_repeat	Simple_repeat	1	685	0	1
1659	chr18	111373	111374	chunk0084_6_1	18.26998	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr18	105673	111670	-80261615	-	BSR/Beta	Satellite	Satellite	-42	5974	1	1
1660	chr17	75301651	75301652	chunk0084_91_1	5.6425	AR_DHT_Control	chr17	75301631	75301915	-7955526	+	MER1B	DNA	hAT-Charlie	29	339	0	1
1661	chr18	2968237	2968238	chunk0085_120_1	9.24875	AR_DHT_Control	chr18	2967941	2968323	-77404962	+	L4_C_Mam	LINE	RTE-X	141	534	-4604	1
1662	chr18	3148383	3148384	chunk0085_131_1	9.90105	AR_DHT_Control	chr18	3148324	3148565	-77224720	+	L1ME1	LINE	L1	5992	6246	-106	1
1663	chr18	3722547	3722548	chunk0085_163_1	19.12827	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	3722120	3722824	-76650461	+	LTR83	LTR	ERVL	31	778	-2	1
1664	chr18	3740826	3740827	chunk0085_165_1	6.48643	AR_DHT_Control	chr18	3740679	3741642	-76631643	+	(ACC)n	Simple_repeat	Simple_repeat	1	977	0	1
1665	chr18	4510883	4510884	chunk0085_171_1	31.4211	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr18	4510684	4511029	-75862256	+	(GTG)n	Simple_repeat	Simple_repeat	1	370	0	1
1666	chr18	5031110	5031111	chunk0085_173_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	5030786	5031249	-75342036	-	MLT2B1	LTR	ERVL	-61	459	3	1
1667	chr18	5246228	5246229	chunk0085_176_1	142.8328	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	5246010	5246279	-75127006	-	MLT1H	LTR	ERVL-MaLR	-31	518	250	1
1668	chr18	5788179	5788180	chunk0085_181_1	9.21264	AR_DHT_Control	chr18	5787975	5788516	-74584769	-	LTR49-int	LTR	ERV1	-5759	572	1	1
1669	chr18	6585594	6585595	chunk0085_201_1	7.16019	AR_DHT_Control	chr18	6581928	6587158	-73786127	+	L1PA16	LINE	L1	5	5333	-1150	1
1670	chr18	6992944	6992945	chunk0085_234_1	287.9799	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	6992865	6993063	-73380222	+	L2c	LINE	L2	3195	3386	-1	1
1671	chr18	7492608	7492609	chunk0085_250_1	65.19857	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	7492534	7492665	-72880620	+	MIRb	SINE	MIR	128	259	-9	1
1672	chr18	7719780	7719781	chunk0085_267_1	6.5427	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	7719640	7719914	-72653371	+	L1M4	LINE	L1	4029	4324	-1822	1
1673	chr18	7941820	7941821	chunk0085_287_1	36.57802	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	7941072	7941866	-72431419	-	L3	LINE	CR1	-290	3809	2930	1
1674	chr18	8053988	8053989	chunk0085_298_1	11.022	AR_DHT_Control	chr18	8053197	8054144	-72319141	-	L1ME3F	LINE	L1	-937	5209	4114	1
1675	chr18	8149048	8149049	chunk0085_306_1	12.1886	AR_DHT_Control	chr18	8146320	8152115	-72221170	-	L1PA7	LINE	L1	-675	5794	5	1
1676	chr18	8391751	8391752	chunk0085_327_1	60.8439	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	8391737	8392328	-71980957	+	L1MC5a	LINE	L1	1971	2540	-237	1
1677	chr18	8475158	8475159	chunk0085_329_1	4.83274	AR_DHT_Control	chr18	8475111	8475169	-71898116	+	(TTCCCCT)n	Simple_repeat	Simple_repeat	1	58	0	1
1678	chr18	8803363	8803364	chunk0085_345_1	9.87004	AR_DHT_Control	chr18	8803242	8803467	-71569818	+	MIRb	SINE	MIR	35	268	0	1
1679	chr18	8963317	8963318	chunk0085_348_1	5.87933	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	8962914	8963337	-71409948	-	LTR16B2	LTR	ERVL	0	462	1	1
1680	chr18	9174588	9174589	chunk0085_355_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	9173369	9174805	-71198480	-	L1PREC2	LINE	L1	-6848	1307	1	1
1681	chr18	9285945	9285946	chunk0085_358_1	15.79581	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	9285538	9286091	-71087194	-	L1ME2	LINE	L1	-1	6163	5578	1
1682	chr18	9352980	9352981	chunk0085_361_1	7.36432	AR_DHT_Control	chr18	9352918	9353267	-71020018	+	Tigger3a	DNA	TcMar-Tigger	2	348	0	1
1683	chr18	9440434	9440435	chunk0085_368_1	12.6499	AR_DHT_Control	chr18	9440366	9440896	-70932389	+	L1MB3	LINE	L1	5599	6155	-28	1
1684	chr18	10953681	10953682	chunk0085_436_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	10953624	10954087	-69419198	-	LTR53B	LTR	ERVL	0	533	1	1
1685	chr18	781436	781437	chunk0085_48_1	10.1564	AR_DHT_Control	chr18	781358	781642	-79591643	+	L2b	LINE	L2	3045	3372	-15	1
1686	chr18	1560399	1560400	chunk0085_73_1	6.58746	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	1559279	1560992	-78812293	-	L1PA17	LINE	L1	-5157	2058	345	1
1687	chr18	2693450	2693451	chunk0085_97_1	53.65672	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	2693272	2693578	-77679707	-	Tigger3a	DNA	TcMar-Tigger	-10	338	1	1
1688	chr18	14095755	14095756	chunk0086_105_1	8.84892	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	14095645	14096441	-66276844	-	L1M3e	LINE	L1	-6646	843	13	1
1689	chr18	21100387	21100388	chunk0086_132_1	6.71885	AR_DHT_Control	chr18	21100229	21100594	-59272691	+	L1MC5	LINE	L1	7933	8320	-984	1
1690	chr18	21638552	21638553	chunk0086_163_1	99.1191	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	21638163	21638587	-58734698	-	MLT2B2	LTR	ERVL	0	515	1	1
1691	chr18	21849944	21849945	chunk0086_175_1	6.9063	AR_DHT_Control	chr18	21849839	21850065	-58523220	-	L1MC5a	LINE	L1	-494	2283	2048	1
1692	chr18	22579805	22579806	chunk0086_219_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	22579666	22580538	-57792747	+	FordPrefect	DNA	hAT-Tip100	483	1353	-330	1
1693	chr18	23551832	23551833	chunk0086_266_1	4.88663	AR_DHT_Control	chr18	23551789	23552095	-56821190	-	L2c	LINE	L2	-3	3384	3061	1
1694	chr18	24799917	24799918	chunk0086_337_1	8.80746	AR_DHT_Control	chr18	24799771	24799924	-55573361	+	L2b	LINE	L2	3211	3374	-1	1
1695	chr18	26035258	26035259	chunk0086_366_1	204.7139	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr18	26035251	26035285	-54338000	+	(AACAA)n	Simple_repeat	Simple_repeat	1	34	0	1
1696	chr18	26345187	26345188	chunk0086_374_1	7.74912	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	26344694	26345963	-54027322	+	L1MA5A	LINE	L1	781	2603	-4963	1
1697	chr18	26445457	26445458	chunk0086_378_1	6.05516	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	26444971	26445820	-53927465	-	L1MEc	LINE	L1	-5486	914	39	1
1698	chr18	27847567	27847568	chunk0086_424_1	19.5595	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	27846892	27847573	-52525712	+	L2a	LINE	L2	2641	3387	0	1
1699	chr18	12954880	12954881	chunk0086_52_1	4.6472	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	12954793	12955016	-67418269	-	L1MB7	LINE	L1	-16	6168	5945	1
1700	chr18	13306356	13306357	chunk0086_79_1	53.5634	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	13304958	13307427	-67065858	+	Tigger2	DNA	TcMar-Tigger	2	2493	-225	1
1701	chr18	33533006	33533007	chunk0087_126_1	6.3145	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	33531863	33533843	-46839442	+	L1PA17	LINE	L1	1453	3393	-3456	1
1702	chr18	33816939	33816940	chunk0087_140_1	5.73594	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	33815750	33818177	-46555108	+	ERVL-B4-int	LTR	ERVL	3304	5714	0	1
1703	chr18	30959927	30959928	chunk0087_15_1	9.79111	AR_DHT_Control	chr18	30959902	30960132	-49413153	+	L2	LINE	L2	2604	2884	-535	1
1704	chr18	35788958	35788959	chunk0087_199_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	35788951	35789236	-44584049	-	AluJb	SINE	Alu	-29	283	1	1
1705	chr18	38764153	38764154	chunk0087_283_1	7.10486	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	38762558	38765303	-41607982	+	L1PB1	LINE	L1	3371	6143	-8	1
1706	chr18	39268268	39268269	chunk0087_300_1	4.34317	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	39268258	39268782	-41104503	-	Kanga1a	DNA	TcMar-Tc2	-192	562	32	1
1707	chr18	40227268	40227269	chunk0087_338_1	5.00158	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	40227154	40227884	-40145401	-	L1ME3E	LINE	L1	-408	5834	5078	1
1708	chr18	40227798	40227799	chunk0087_339_1	7.48058	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	40227154	40227884	-40145401	-	L1ME3E	LINE	L1	-408	5834	5078	1
1709	chr18	40964521	40964522	chunk0087_353_1	26.95107	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	40963938	40965452	-39407833	+	L1PA15	LINE	L1	4656	6163	-2	1
1710	chr18	40975989	40975990	chunk0087_354_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	40973563	40977360	-39395925	-	L1MA4A	LINE	L1	-3246	4316	373	1
1711	chr18	30217971	30217972	chunk0087_4_1	27.74249	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	30217722	30220106	-50153179	-	Tigger1	DNA	TcMar-Tigger	-8	2410	1	1
1712	chr18	42529415	42529416	chunk0087_439_1	5.07296	AR_DHT_Control	chr18	42529406	42529508	-37843777	-	MER102a	DNA	hAT-Charlie	-144	186	83	1
1713	chr18	31591631	31591632	chunk0087_58_1	7.78335	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	31591606	31591654	-48781631	+	(TTTTG)n	Simple_repeat	Simple_repeat	1	50	0	1
1714	chr18	31633625	31633626	chunk0087_61_1	6.48643	AR_DHT_Control	chr18	31633611	31633849	-48739436	+	L2a	LINE	L2	2930	3207	-219	1
1715	chr18	45330262	45330263	chunk0088_107_1	4.73937	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	45330194	45330452	-35042833	+	MamSINE1	SINE	tRNA-RTE	18	275	-15	1
1716	chr18	46030774	46030775	chunk0088_139_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	46030478	46031183	-34342102	-	HAL1b	LINE	L1	-550	1871	1164	1
1717	chr18	46632261	46632262	chunk0088_155_1	5.27772	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	46632178	46632305	-33740980	-	MIR	SINE	MIR	-138	124	1	1
1718	chr18	46790162	46790163	chunk0088_163_1	49.1553	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	46789756	46790229	-33583056	+	MER77	LTR	ERVL	1	534	-70	1
1719	chr18	46868160	46868161	chunk0088_167_1	7.92341	AR_DHT_Control	chr18	46867681	46868192	-33505093	+	MLT1G3	LTR	ERVL-MaLR	5	525	-70	1
1720	chr18	43003010	43003011	chunk0088_2_1	8.84892	AR_DHT_Control	chr18	43002714	43003237	-37370048	+	MLT1D	LTR	ERVL-MaLR	1	503	-2	1
1721	chr18	43484942	43484943	chunk0088_21_1	8.0668	AR_DHT_Control	chr18	43484814	43484976	-36888309	+	LTR18B	LTR	ERVL	14	176	-438	1
1722	chr18	48476374	48476375	chunk0088_234_1	48.8819	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	48476293	48476482	-31896803	-	MIR	SINE	MIR	0	262	35	1
1723	chr18	48649743	48649744	chunk0088_246_1	24.8125	AR_DHT_Control	chr18	48648985	48655135	-31718150	+	L1PA6	LINE	L1	5	6154	0	1
1724	chr18	49273658	49273659	chunk0088_272_1	10.0617	AR_DHT_Control	chr18	49273465	49273803	-31099482	+	Tigger3a	DNA	TcMar-Tigger	6	348	0	1
1725	chr18	49369248	49369249	chunk0088_276_1	5.99997	AR_DHT_Control	chr18	49369246	49369711	-31003574	-	HAL1	LINE	L1	-1967	540	16	1
1726	chr18	51537969	51537970	chunk0088_344_1	9.44294	AR_DHT_Control	chr18	51537887	51538074	-28835211	-	LTR106_Mam	LTR	LTR	-44	664	475	1
1727	chr18	52748505	52748506	chunk0088_358_1	4.83532	AR_DHT_Control	chr18	52747896	52748914	-27624371	-	LTR2752	LTR	ERV1	0	1755	192	1
1728	chr18	54260988	54260989	chunk0088_382_1	7.80332	AR_DHT_Control	chr18	54260980	54261346	-26111939	+	MLT2B4	LTR	ERVL	1	371	-185	1
1729	chr18	54351464	54351465	chunk0088_392_1	17.08068	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	54349511	54352393	-26020892	-	L1PB2	LINE	L1	-5	6146	3200	1
1730	chr18	56676852	56676853	chunk0088_445_1	5.6425	AR_DHT_Control	chr18	56676697	56676876	-23696409	-	AluJb	SINE	Alu	0	312	134	1
1731	chr18	57132030	57132031	chunk0088_453_1	31.0608	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	57131994	57132051	-23241234	-	L2a	LINE	L2	-6	3420	3364	1
1732	chr18	43984792	43984793	chunk0088_48_1	67.7191	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	43983985	43990386	-36382899	+	L1PA6	LINE	L1	174	6517	0	1
1733	chr18	43175545	43175546	chunk0088_8_1	51.1771	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	43175453	43175568	-37197717	-	L2b	LINE	L2	-6	3369	3251	1
1734	chr18	58591266	58591267	chunk0089_118_1	5.6503	AR_DHT_Control	chr18	58591264	58591340	-21781945	-	MIRc	SINE	MIR	-121	147	71	1
1735	chr18	58654256	58654257	chunk0089_121_1	6.48643	AR_DHT_Control	chr18	58653559	58655472	-21717813	-	L1M2	LINE	L1	-2687	4172	2103	1
1736	chr18	59086689	59086690	chunk0089_160_1	6.92493	AR_DHT_Control	chr18	59086471	59086700	-21286585	-	MIR	SINE	MIR	-21	241	6	1
1737	chr18	61350710	61350711	chunk0089_220_1	5.82105	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	61350615	61351003	-19022282	-	MLT1J2	LTR	ERVL-MaLR	-14	434	1	1
1738	chr18	62716169	62716170	chunk0089_267_1	6.06371	AR_DHT_Control	chr18	62716163	62716181	-17657104	+	(CCTCGG)n	Simple_repeat	Simple_repeat	1	112	0	1
1739	chr18	62846448	62846449	chunk0089_276_1	13.1127	AR_DHT_Control	chr18	62846369	62846494	-17526791	-	L2c	LINE	L2	-225	3162	3038	1
1740	chr18	63809469	63809470	chunk0089_307_1	6.3126	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	63809249	63809905	-16563380	-	L2c	LINE	L2	-153	3234	2533	1
1741	chr18	63848567	63848568	chunk0089_309_1	60.18752	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	63848505	63848893	-16524392	-	L1ME1	LINE	L1	-2	6177	5768	1
1742	chr18	64803658	64803659	chunk0089_317_1	5.08049	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	64803472	64803764	-15569521	-	L1PA15	LINE	L1	-5	6160	5868	1
1743	chr18	66004412	66004413	chunk0089_349_1	7.03383	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	66003344	66004906	-14368379	+	L1M1	LINE	L1	16	1630	-5935	1
1744	chr18	66687759	66687760	chunk0089_354_1	5.12066	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	66687401	66688380	-13684905	+	MER41-int	LTR	ERV1	4068	4827	-390	1
1745	chr18	66724799	66724800	chunk0089_355_1	5.6425	AR_DHT_Control	chr18	66724752	66724861	-13648424	+	MamRTE1	LINE	RTE-BovB	3471	3579	-233	1
1746	chr18	67121179	67121180	chunk0089_369_1	67.0265	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	67121085	67121330	-13251955	+	L1M4	LINE	L1	1	250	-7267	1
1747	chr18	67651725	67651726	chunk0089_386_1	25.783	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	67651665	67651850	-12721435	+	MER5A	DNA	hAT-Charlie	2	188	-1	1
1748	chr18	67754849	67754850	chunk0089_388_1	30.6123	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	67754841	67755144	-12618141	-	L1MA4	LINE	L1	-5	6295	5986	1
1749	chr18	68606832	68606833	chunk0089_410_1	6.28518	AR_DHT_Control	chr18	68606718	68607138	-11766147	-	MSTB	LTR	ERVL-MaLR	0	426	1	1
1750	chr18	69780605	69780606	chunk0089_423_1	17.22908	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr18	69780309	69780615	-10592670	+	AluSz	SINE	Alu	1	306	-6	1
1751	chr18	69949755	69949756	chunk0089_429_1	11.37385	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr18	69949579	69950255	-10423030	+	(CA)n	Simple_repeat	Simple_repeat	1	677	0	1
1752	chr18	70304856	70304857	chunk0089_450_1	112.6521	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	70304407	70304924	-10068361	-	L1M4	LINE	L1	-617	5557	5037	1
1753	chr18	57382278	57382279	chunk0089_7_1	114.8556	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr18	57381957	57382409	-22990876	+	L1ME1	LINE	L1	5327	5771	-408	1
1754	chr18	58213127	58213128	chunk0089_72_1	5.73759	AR_DHT_Control	chr18	58212857	58213475	-22159810	+	L1ME3G	LINE	L1	1	549	-375	1
1755	chr18	71052360	71052361	chunk0090_106_1	9.08241	AR_DHT_Control	chr18	71052232	71052438	-9320847	+	L2a	LINE	L2	2910	3129	-297	1
1756	chr18	71640910	71640911	chunk0090_118_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	71640419	71641259	-8732026	-	LTR28B	LTR	ERV1	0	974	1	1
1757	chr18	71810373	71810374	chunk0090_126_1	13.352	AR_DHT_Control	chr18	71809446	71810402	-8562883	+	L1MB7	LINE	L1	1	1016	-6501	1
1758	chr18	71879023	71879024	chunk0090_132_1	29.2957	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	71878652	71879191	-8494094	+	L1M4b	LINE	L1	1913	2519	-4348	1
1759	chr18	72393407	72393408	chunk0090_154_1	23.72996	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	72392786	72393875	-7979410	+	L1MC3	LINE	L1	7164	7785	0	1
1760	chr18	72409599	72409600	chunk0090_157_1	21.39717	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	72409488	72409874	-7963411	+	AluJb	SINE	Alu	2	302	-10	1
1761	chr18	72519109	72519110	chunk0090_163_1	13.8894	AR_DHT_Control	chr18	72518911	72519336	-7853949	+	L1ME1	LINE	L1	5842	6316	-36	1
1762	chr18	73245882	73245883	chunk0090_205_1	14.45236	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	73245659	73245895	-7127390	+	MLT1K	LTR	ERVL-MaLR	203	437	-158	1
1763	chr18	73881621	73881622	chunk0090_245_1	34.69623	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	73881189	73881916	-6491369	+	MER72B	LTR	ERV1	17	765	-3	1
1764	chr18	74831285	74831286	chunk0090_278_1	61.15199	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	74831284	74831712	-5541573	-	L1MB3	LINE	L1	-47	6136	5704	1
1765	chr18	74930968	74930969	chunk0090_284_1	8.15319	AR_DHT_Control	chr18	74929876	74931053	-5442232	-	L1MC4a	LINE	L1	-6	7876	6613	1
1766	chr18	75673475	75673476	chunk0090_317_1	7.4311	AR_DHT_Control	chr18	75673164	75674344	-4698941	-	L1ME2	LINE	L1	-335	6689	5491	1
1767	chr18	76428503	76428504	chunk0090_345_1	11.0952	AR_DHT_Control	chr18	76428417	76428531	-3944754	+	L1ME3G	LINE	L1	398	509	-415	1
1768	chr18	77191207	77191208	chunk0090_376_1	29.8674	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	77190975	77191416	-3181869	-	L1ME3G	LINE	L1	-2074	5808	5521	1
1769	chr19	1407309	1407310	chunk0090_39_1	5.16131	SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	1407282	1407349	-57210267	+	(CGCA)n	Simple_repeat	Simple_repeat	1	72	0	1
1770	chr18	77485897	77485898	chunk0090_390_1	5.23393	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	77485359	77485918	-2887367	+	L2	LINE	L2	1326	1877	-1542	1
1771	chr18	78780973	78780974	chunk0090_404_1	6.48643	AR_DHT_Control	chr18	78780649	78781116	-1592169	-	MER119	DNA	hAT-Charlie	-34	549	80	1
1772	chr18	78809961	78809962	chunk0090_407_1	7.12698	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	78809729	78810291	-1562994	+	(CA)n	Simple_repeat	Simple_repeat	1	579	0	1
1773	chr18	79824209	79824210	chunk0090_447_1	15.61981	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	79823990	79824297	-548988	-	AluJb	SINE	Alu	0	312	1	1
1774	chr19	2163419	2163420	chunk0090_65_1	4.42675	SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	2163375	2163491	-56454125	-	AluSp	SINE	Alu	-197	116	1	1
1775	chr18	70467470	70467471	chunk0090_82_1	7.92341	AR_DHT_Control	chr18	70467406	70467496	-9905789	-	MIRc	SINE	MIR	-136	132	45	1
1776	chr19	5888546	5888547	chunk0091_105_1	12.0334	AR_DHT_Control	chr19	5888347	5888615	-52729001	-	Tigger3a	DNA	TcMar-Tigger	-9	339	59	1
1777	chr19	6229646	6229647	chunk0091_115_1	7.24914	AR_DHT_Control	chr19	6229484	6229881	-52387735	+	(AC)n	Simple_repeat	Simple_repeat	1	426	0	1
1778	chr19	2923770	2923771	chunk0091_12_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	2923532	2924007	-55693609	+	MER68	LTR	ERVL	8	563	0	1
1779	chr19	6250261	6250262	chunk0091_120_1	15.70144	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	6250048	6250421	-52367195	+	L1MB5	LINE	L1	5279	5646	-528	1
1780	chr19	7153177	7153178	chunk0091_140_1	4.83532	AR_DHT_Control	chr19	7152972	7153502	-51464114	+	(AC)n	Simple_repeat	Simple_repeat	1	576	0	1
1781	chr19	7331304	7331305	chunk0091_146_1	6.46639	Merged_Lncap_AR_Veh	chr19	7331185	7331890	-51285726	+	(CAT)n	Simple_repeat	Simple_repeat	1	707	0	1
1782	chr19	2953321	2953322	chunk0091_15_1	15.16935	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr19	2953013	2953324	-55664292	+	LTR43B	LTR	ERV1	237	572	0	1
1783	chr19	7665242	7665243	chunk0091_167_1	47.7698	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	7665194	7665362	-50952254	+	L1M3	LINE	L1	5567	5738	-428	1
1784	chr19	3221445	3221446	chunk0091_19_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	3221420	3221541	-55396075	+	MIR	SINE	MIR	1	130	-132	1
1785	chr19	3245053	3245054	chunk0091_20_1	16.14962	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr19	3244225	3245438	-55372178	+	(TG)n	Simple_repeat	Simple_repeat	1	1260	0	1
1786	chr19	9190813	9190814	chunk0091_202_1	25.2918	AR_DHT_Control	chr19	9190670	9191270	-49426346	+	SATR2	Satellite	Satellite	1	621	-3	1
1787	chr19	9431389	9431390	chunk0091_207_1	6.77976	SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	9431184	9431393	-49186223	+	LTR41B	LTR	ERVL	210	434	-324	1
1788	chr19	9803628	9803629	chunk0091_215_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	9803433	9804104	-48813512	-	LTR8A	LTR	ERV1	0	727	32	1
1789	chr19	10397281	10397282	chunk0091_228_1	19.08209	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	10397242	10397415	-48220201	-	AluJb	SINE	Alu	0	312	137	1
1790	chr19	10660500	10660501	chunk0091_238_1	7.97539	AR_DHT_Control	chr19	10660365	10660584	-47957032	-	MIRc	SINE	MIR	-15	253	11	1
1791	chr19	10749589	10749590	chunk0091_248_1	20.41694	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	10749523	10749685	-47867931	-	MIRb	SINE	MIR	-91	171	13	1
1792	chr19	11064988	11064989	chunk0091_259_1	10.3842	AR_DHT_Control	chr19	11064813	11065519	-47552097	-	L1M4a2	LINE	L1	-1803	853	4	1
1793	chr19	11158062	11158063	chunk0091_263_1	16.4778	AR_DHT_Control	chr19	11157938	11158200	-47459416	+	L1MB3	LINE	L1	5428	5669	-514	1
1794	chr19	11581266	11581267	chunk0091_272_1	9.68651	AR_DHT_Control	chr19	11581209	11581451	-47036165	+	L2a	LINE	L2	2911	3150	-276	1
1795	chr19	11729679	11729680	chunk0091_282_1	5.98931	SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	11729494	11729822	-46887794	+	MER54A	LTR	ERVL	439	755	-146	1
1796	chr19	11854169	11854170	chunk0091_284_1	22.1433	AR_DHT_Control	chr19	11853713	11854477	-46763139	-	HERVK3-int	LTR	ERVK	-2	7200	6398	1
1797	chr19	12801872	12801873	chunk0091_305_1	38.01205	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr19	12801854	12801887	-45815729	+	(CGGAG)n	Simple_repeat	Simple_repeat	1	38	0	1
1798	chr19	14103053	14103054	chunk0091_333_1	4.66817	SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	14103011	14103328	-44514288	-	L2b	LINE	L2	-5	3370	3075	1
1799	chr19	14110686	14110687	chunk0091_334_1	10.3593	AR_DHT_Control	chr19	14110617	14110697	-44506919	-	L1ME3	LINE	L1	-24	6138	6059	1
1800	chr19	14595926	14595927	chunk0091_346_1	8.26412	SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	14595566	14596030	-44021586	+	(TGA)n	Simple_repeat	Simple_repeat	1	469	0	1
1801	chr19	15381349	15381350	chunk0091_359_1	46.34577	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	15381028	15381391	-43236225	+	L1ME4c	LINE	L1	5436	5821	-303	1
1802	chr19	16488969	16488970	chunk0091_405_1	21.11522	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	16488844	16489174	-42128442	-	MER58B	DNA	hAT-Charlie	-1	340	7	1
1803	chr19	4053738	4053739	chunk0091_41_1	13.93519	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	4053354	4053881	-54563735	+	(GTGT)n	Simple_repeat	Simple_repeat	1	531	0	1
1804	chr19	16825615	16825616	chunk0091_419_1	42.15808	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	16825338	16825687	-41791929	+	L2b	LINE	L2	2612	2985	-434	1
1805	chr19	17395267	17395268	chunk0091_447_1	5.82105	AR_DHT_Control	chr19	17395196	17395295	-41222321	+	(CTCCTC)n	Simple_repeat	Simple_repeat	1	100	0	1
1806	chr19	17516118	17516119	chunk0091_450_1	5.95444	AR_DHT_Control	chr19	17516011	17516123	-41101493	+	MIR	SINE	MIR	68	184	-78	1
1807	chr19	18377169	18377170	chunk0091_466_1	110.12191	Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	18377055	18377212	-40240404	+	L1MB8	LINE	L1	5570	5727	-457	1
1808	chr19	4547711	4547712	chunk0091_48_1	7.43227	SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	4547575	4547919	-54069697	+	L2	LINE	L2	2724	3068	-351	1
1809	chr19	4559395	4559396	chunk0091_49_1	8.90544	SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	4559320	4559418	-54058198	-	L3	LINE	CR1	-106	3993	3897	1
1810	chr19	4915375	4915376	chunk0091_63_1	6.48643	AR_DHT_Control	chr19	4915314	4915428	-53702188	-	MER58A	DNA	hAT-Charlie	-65	159	46	1
1811	chr19	4991986	4991987	chunk0091_74_1	440.1983	SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	4991941	4992046	-53625570	-	L1M4	LINE	L1	-2784	3362	3267	1
1812	chr19	5605749	5605750	chunk0091_89_1	5.77445	SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	5605660	5605837	-53011779	+	L1MEc	LINE	L1	565	772	-6157	1
1813	chr19	18542171	18542172	chunk0092_11_1	9.37933	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	18542060	18542236	-40075380	+	MIR	SINE	MIR	56	262	0	1
1814	chr19	27997698	27997699	chunk0092_134_1	8.21385	SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	27997295	27999053	-30618563	-	L1M2	LINE	L1	-1319	4824	3039	1
1815	chr19	30028625	30028626	chunk0092_180_1	6.49378	SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	30028580	30030640	-28586976	-	L1MB7	LINE	L1	-288	2368	66	1
1816	chr19	31203411	31203412	chunk0092_205_1	6.22495	SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	31202853	31203516	-27414100	-	L2a	LINE	L2	0	3426	2738	1
1817	chr19	18809615	18809616	chunk0092_23_1	9.21264	AR_DHT_Control	chr19	18809508	18809925	-39807691	-	L1MB5	LINE	L1	-46	6128	5739	1
1818	chr19	32997978	32997979	chunk0092_251_1	4.83532	AR_DHT_Control	chr19	32997790	32998075	-25619541	-	L2a	LINE	L2	-267	3159	2814	1
1819	chr19	33037275	33037276	chunk0092_257_1	10.3647	AR_DHT_Control	chr19	33036455	33037857	-25579759	+	LTR12C	LTR	ERV1	2	1579	0	1
1820	chr19	33086005	33086006	chunk0092_262_1	6.98722	AR_DHT_Control	chr19	33085999	33086168	-25531448	+	MER20	DNA	hAT-Charlie	32	219	0	1
1821	chr19	33184469	33184470	chunk0092_265_1	5.50529	AR_DHT_Control	chr19	33184039	33184532	-25433084	-	ERVL-B4-int	LTR	ERVL	-624	5090	4599	1
1822	chr19	33234616	33234617	chunk0092_267_1	5.44741	AR_DHT_Control	chr19	33234489	33234624	-25382992	-	MER94	DNA	hAT-Blackjack	-1	133	2	1
1823	chr19	18848943	18848944	chunk0092_28_1	9.83318	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	18848903	18848975	-39768641	+	Tigger15a	DNA	TcMar-Tigger	26	97	-618	1
1824	chr19	34027978	34027979	chunk0092_290_1	26.97483	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	34027825	34028086	-24589530	+	LTR54B	LTR	ERV1	3	295	-203	1
1825	chr19	34259444	34259445	chunk0092_299_1	30.5783	AR_DHT_Control	chr19	34259410	34259495	-24358121	-	L2b	LINE	L2	-4	3371	3289	1
1826	chr19	19026940	19026941	chunk0092_30_1	6.6833	AR_DHT_Control	chr19	19026831	19026943	-39590673	+	MLT1M	LTR	ERVL-MaLR	223	345	-327	1
1827	chr19	35298112	35298113	chunk0092_345_1	8.13752	AR_DHT_Control	chr19	35297119	35299087	-23318529	+	(AC)n	Simple_repeat	Simple_repeat	1	1982	0	1
1828	chr19	35388418	35388419	chunk0092_350_1	26.6696	AR_DHT_Control	chr19	35388331	35388426	-23229190	-	LOR1-int	LTR	ERV1	-7422	698	609	1
1829	chr19	36035035	36035036	chunk0092_369_1	24.4864	AR_DHT_Control	chr19	36034824	36035119	-22582497	+	L2a	LINE	L2	3032	3391	-35	1
1830	chr19	37969869	37969870	chunk0092_418_1	34.107	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	37969582	37970076	-20647540	+	L2c	LINE	L2	2876	3384	-3	1
1831	chr19	38316049	38316050	chunk0092_437_1	5.43798	SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	38316030	38316062	-20301554	+	(C)n	Simple_repeat	Simple_repeat	1	32	0	1
1832	chr19	39150043	39150044	chunk0092_457_1	30.731	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	39149896	39150111	-19467505	+	L1MB4	LINE	L1	5952	6179	-1	1
1833	chr19	19606170	19606171	chunk0092_48_1	6.13992	AR_DHT_Control	chr19	19606088	19606607	-39011009	+	MLT1E1A	LTR	ERVL-MaLR	3	678	-2	1
1834	chr19	20083103	20083104	chunk0092_59_1	13.1127	AR_DHT_Control	chr19	20082341	20083300	-38534316	+	LTR5_Hs	LTR	ERVK	1	965	-3	1
1835	chr19	22935906	22935907	chunk0092_94_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	22934026	22936211	-35681405	-	BSR/Beta	Satellite	Satellite	-15	2189	1	1
1836	chr19	23115484	23115485	chunk0092_98_1	4.55016	SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	23115365	23115880	-35501736	+	MLT1H	LTR	ERVL-MaLR	11	549	0	1
1837	chr19	46030929	46030930	chunk0093_133_1	9.21264	AR_DHT_Control	chr19	46030891	46031467	-12586149	+	LTR14	LTR	ERVK	1	548	0	1
1838	chr19	46378407	46378408	chunk0093_141_1	13.8104	AR_DHT_Control	chr19	46377973	46378889	-12238727	-	L1ME2	LINE	L1	-2947	3994	2985	1
1839	chr19	46761576	46761577	chunk0093_145_1	42.83064	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	46761472	46761682	-11855934	+	MER20B	DNA	hAT-Charlie	217	459	-324	1
1840	chr19	48061476	48061477	chunk0093_164_1	65.9881	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr19	48061301	48061512	-10556104	-	MIR	SINE	MIR	-10	252	44	1
1841	chr19	48571565	48571566	chunk0093_179_1	54.1264	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	48571555	48571628	-10045988	-	L2b	LINE	L2	-15	3360	3287	1
1842	chr19	48582372	48582373	chunk0093_181_1	46.9361	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	48582207	48582550	-10035066	-	L1ME4b	LINE	L1	-254	638	306	1
1843	chr19	49165402	49165403	chunk0093_192_1	22.84352	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	49165172	49165519	-9452097	-	MER113	DNA	hAT-Charlie	-160	361	3	1
1844	chr19	49229624	49229625	chunk0093_193_1	17.9956	AR_DHT_Control	chr19	49229578	49229968	-9387648	+	LTR40c	LTR	ERVL	1	407	-58	1
1845	chr19	49672335	49672336	chunk0093_210_1	7.36432	AR_DHT_Control	chr19	49672292	49672856	-8944760	-	L2c	LINE	L2	-380	3039	2363	1
1846	chr19	49766160	49766161	chunk0093_213_1	5.20246	SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	49766132	49766271	-8851345	+	MIRc	SINE	MIR	60	199	-31	1
1847	chr19	50135988	50135989	chunk0093_225_1	11.8303	Merged_Lncap_AR_Veh	chr19	50135964	50136288	-8481328	+	L1PB1	LINE	L1	5822	6150	-1	1
1848	chr19	50861673	50861674	chunk0093_246_1	6.40649	AR_DHT_Control	chr19	50861468	50861928	-7755688	-	LTR53B	LTR	ERVL	-12	521	19	1
1849	chr19	50921835	50921836	chunk0093_254_1	64.24967	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	50921810	50921837	-7695779	+	(TTGT)n	Simple_repeat	Simple_repeat	1	27	0	1
1850	chr19	52395628	52395629	chunk0093_294_1	4.81216	SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	52395479	52395929	-6221687	-	MER70A	LTR	ERVL	0	472	1	1
1851	chr19	39332573	39332574	chunk0093_31_1	5.88709	SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	39332467	39332615	-19285001	+	L1MD	LINE	L1	3622	3759	-2387	1
1852	chr19	54831541	54831542	chunk0093_341_1	40.2193	SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	54831515	54831778	-3785838	-	L1M5	LINE	L1	-1170	4976	4699	1
1853	chr19	39411638	39411639	chunk0093_35_1	6.82686	AR_DHT_Control	chr19	39410928	39411768	-19205848	+	L2a	LINE	L2	2485	3426	0	1
1854	chr19	39430850	39430851	chunk0093_37_1	56.17568	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	39430839	39431000	-19186616	-	MER6B	DNA	TcMar-Tigger	-4	206	1	1
1855	chr19	55956660	55956661	chunk0093_372_1	155.5239	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr19	55956658	55956745	-2660871	-	MER81	DNA	hAT-Blackjack	-26	88	2	1
1856	chr19	56725089	56725090	chunk0093_393_1	7.12934	SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	56725068	56725522	-1892094	+	LTR8A	LTR	ERV1	1	454	-273	1
1857	chr19	56855784	56855785	chunk0093_397_1	5.193	SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	56855764	56855809	-1761807	+	MADE1	DNA	TcMar-Mariner	1	46	-34	1
1858	chr19	56934939	56934940	chunk0093_401_1	9.68458	AR_DHT_Control	chr19	56934814	56934950	-1682666	-	L1MB3	LINE	L1	-8	6175	6048	1
1859	chr19	57302829	57302830	chunk0093_412_1	7.67158	SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	57301226	57303573	-1314043	-	L1M2a	LINE	L1	-5052	2514	399	1
1860	chr19	57824379	57824380	chunk0093_427_1	6.13843	AR_DHT_Control	chr19	57823626	57824595	-793021	+	LTR5B	LTR	ERVK	3	1002	0	1
1861	chr19	58182020	58182021	chunk0093_430_1	8.91027	AR_DHT_Control	chr19	58181730	58182087	-435529	+	L1M5	LINE	L1	4061	4447	-1699	1
1862	chr19	40349484	40349485	chunk0093_60_1	5.25527	SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	40349451	40349643	-18267973	+	MIRb	SINE	MIR	33	228	-40	1
1863	chr2	4974163	4974164	chunk0094_141_1	5.54895	SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	4973257	4974251	-237219278	+	(GT)n	Simple_repeat	Simple_repeat	1	1044	0	1
1864	chr2	5070274	5070275	chunk0094_143_1	6.43609	AR_DHT_Control	chr2	5070016	5070853	-237122676	+	L1MD1	LINE	L1	5404	6240	-2	1
1865	chr2	5444919	5444920	chunk0094_166_1	22.09184	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	5444893	5445230	-236748299	+	(TG)n	Simple_repeat	Simple_repeat	1	343	0	1
1866	chr2	6195115	6195116	chunk0094_191_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	6194953	6195543	-235997986	-	LTR10C	LTR	ERV1	-1	590	1	1
1867	chr2	6332877	6332878	chunk0094_197_1	8.27376	AR_DHT_Control	chr2	6331341	6333093	-235860436	-	L1PA6	LINE	L1	-3824	2495	746	1
1868	chr2	6769744	6769745	chunk0094_224_1	5.73469	AR_DHT_Control	chr2	6769040	6769922	-235423607	+	(GT)n	Simple_repeat	Simple_repeat	1	914	0	1
1869	chr2	1358866	1358867	chunk0094_24_1	4.83532	AR_DHT_Control	chr2	1358271	1359002	-240834527	-	L1MB1	LINE	L1	-2890	3250	2481	1
1870	chr2	8605751	8605752	chunk0094_304_1	8.91027	AR_DHT_Control	chr2	8605531	8605864	-233587665	+	Tigger3b	DNA	TcMar-Tigger	853	1229	-2	1
1871	chr2	8820254	8820255	chunk0094_310_1	7.22694	AR_DHT_Control	chr2	8820190	8820410	-233373119	+	L2a	LINE	L2	3185	3426	0	1
1872	chr2	9422801	9422802	chunk0094_349_1	4.03311	AR_DHT_Control	chr2	9422725	9422939	-232770590	-	MIRb	SINE	MIR	-13	255	34	1
1873	chr2	9635916	9635917	chunk0094_362_1	5.78771	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	9635822	9635956	-232557573	+	L2c	LINE	L2	3234	3365	-22	1
1874	chr2	9947424	9947425	chunk0094_380_1	21.35109	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	9947094	9947530	-232245999	+	L1ME4b	LINE	L1	357	803	-89	1
1875	chr2	10303298	10303299	chunk0094_393_1	6.18774	AR_DHT_Control	chr2	10303274	10303304	-231890225	+	(TG)n	Simple_repeat	Simple_repeat	1	31	0	1
1876	chr2	10458049	10458050	chunk0094_409_1	92.8749	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	10457514	10458363	-231735166	-	MER97a	DNA	hAT-Tip100	-62	828	3	1
1877	chr2	11483215	11483216	chunk0094_443_1	8.76676	AR_DHT_Control	chr2	11483149	11483342	-230710187	+	(TG)n	Simple_repeat	Simple_repeat	1	194	0	1
1878	chr2	11623140	11623141	chunk0094_460_1	6.48643	AR_DHT_Control	chr2	11623069	11623608	-230569921	+	Tigger3b	DNA	TcMar-Tigger	2	567	-664	1
1879	chr2	3404724	3404725	chunk0094_63_1	69.14956	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	3404645	3404750	-238788779	+	L2b	LINE	L2	3261	3374	-1	1
1880	chr2	3690116	3690117	chunk0094_81_1	6.18774	AR_DHT_Control	chr2	3689061	3690277	-238503252	-	L1M1	LINE	L1	-2826	4736	3462	1
1881	chr2	3971608	3971609	chunk0094_89_1	5.09613	SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	3971302	3972257	-238221272	+	(GT)n	Simple_repeat	Simple_repeat	1	1002	0	1
1882	chr2	11655961	11655962	chunk0095_1_1	15.727	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	11655676	11656021	-230537508	-	L1ME4c	LINE	L1	-363	467	298	1
1883	chr2	16735097	16735098	chunk0095_138_1	13.13556	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	16734897	16735176	-225458353	-	ORSL	DNA	hAT-Tip100	0	275	1	1
1884	chr2	17580897	17580898	chunk0095_170_1	6.98538	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	17580863	17580982	-224612547	-	L1ME4a	LINE	L1	-4	6120	5987	1
1885	chr2	18009371	18009372	chunk0095_191_1	12.2633	AR_DHT_Control	chr2	18009121	18009695	-224183834	+	L1ME3A	LINE	L1	5554	6160	-13	1
1886	chr2	18230485	18230486	chunk0095_195_1	57.2622	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	18230057	18231152	-223962377	+	L1PREC2	LINE	L1	2914	4017	-2129	1
1887	chr2	19178513	19178514	chunk0095_242_1	53.07363	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	19178386	19178517	-223015012	-	MIR3	SINE	MIR	-76	132	9	1
1888	chr2	20128161	20128162	chunk0095_286_1	24.83691	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	20128070	20128340	-222065189	-	L1ME4b	LINE	L1	-329	563	342	1
1889	chr2	23446158	23446159	chunk0095_371_1	16.09848	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	23445984	23446231	-218747298	-	L1M2	LINE	L1	-922	5221	4960	1
1890	chr2	24754728	24754729	chunk0095_420_1	22.9428	AR_DHT_Control	chr2	24753405	24754837	-217438692	+	L2a	LINE	L2	1851	3426	0	1
1891	chr2	24871913	24871914	chunk0095_427_1	9.56998	AR_DHT_Control	chr2	24871657	24871974	-217321555	+	CR1_Mam	LINE	CR1	1127	1454	-750	1
1892	chr2	25776496	25776497	chunk0095_459_1	114.7559	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	25776070	25776687	-216416842	-	L1MB7	LINE	L1	-58	6126	5465	1
1893	chr2	14231870	14231871	chunk0095_59_1	5.48927	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	14231711	14231977	-227961552	-	L3	LINE	CR1	-115	3984	3700	1
1894	chr2	14258645	14258646	chunk0095_62_1	24.9188	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	14258521	14258930	-227934599	-	L2c	LINE	L2	0	3387	2947	1
1895	chr2	15023493	15023494	chunk0095_84_1	25.01932	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	15023037	15023848	-227169681	-	L1ME3G	LINE	L1	-128	796	3	1
1896	chr2	28633353	28633354	chunk0096_124_1	17.58574	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	28633305	28633495	-213560034	+	MIRb	SINE	MIR	37	243	-25	1
1897	chr2	29005880	29005881	chunk0096_143_1	7.26927	SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	29004559	29006509	-213187020	+	(GT)n	Simple_repeat	Simple_repeat	1	1975	0	1
1898	chr2	29112540	29112541	chunk0096_146_1	7.36432	AR_DHT_Control	chr2	29111497	29112684	-213080845	-	L1ME3Cz	LINE	L1	-743	5663	4458	1
1899	chr2	29233785	29233786	chunk0096_153_1	14.14907	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	29233775	29233995	-212959534	-	L2c	LINE	L2	-69	3318	3098	1
1900	chr2	29723418	29723419	chunk0096_173_1	8.93364	AR_DHT_Control	chr2	29722609	29723567	-212469962	+	L2a	LINE	L2	2260	3425	-1	1
1901	chr2	26380307	26380308	chunk0096_24_1	18.6213	AR_DHT_Control	chr2	26379707	26381015	-215812514	-	L1MC5	LINE	L1	-1339	7965	6611	1
1902	chr2	31286491	31286492	chunk0096_251_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	31286432	31286517	-210907012	-	MIR3	SINE	MIR	-95	113	34	1
1903	chr2	31314181	31314182	chunk0096_254_1	32.1074	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	31313725	31314421	-210879108	-	L1MC1	LINE	L1	-8	6325	5616	1
1904	chr2	31390914	31390915	chunk0096_257_1	8.45722	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	31389846	31391841	-210801688	-	L1MC1	LINE	L1	-5	6503	4487	1
1905	chr2	31949630	31949631	chunk0096_276_1	5.46037	AR_DHT_Control	chr2	31948876	31949928	-210243601	+	L1MA1	LINE	L1	5256	6302	0	1
1906	chr2	32365212	32365213	chunk0096_287_1	9.99928	AR_DHT_Control	chr2	32365150	32365325	-209828204	+	MIR	SINE	MIR	21	252	-10	1
1907	chr2	32916274	32916275	chunk0096_304_1	23.4224	Merged_Lncap_AR_Veh	chr2	32916229	32916625	-209276904	+	(G)n	Simple_repeat	Simple_repeat	1	396	0	1
1908	chr2	33190601	33190602	chunk0096_316_1	20.03843	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	33190493	33190697	-209002832	+	MIRc	SINE	MIR	3	254	-14	1
1909	chr2	34985999	34986000	chunk0096_330_1	4.42675	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	34985908	34986374	-207207155	-	Tigger3b	DNA	TcMar-Tigger	-760	471	2	1
1910	chr2	26867371	26867372	chunk0096_34_1	14.3256	AR_DHT_Control	chr2	26867345	26867443	-215326086	-	L1ME3G	LINE	L1	-360	564	466	1
1911	chr2	35665745	35665746	chunk0096_347_1	5.48927	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	35665727	35665818	-206527711	+	L2a	LINE	L2	3315	3406	-20	1
1912	chr2	35822736	35822737	chunk0096_350_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	35822606	35822772	-206370757	+	MamRep1151	LTR?	LTR?	509	682	-27	1
1913	chr2	36779553	36779554	chunk0096_374_1	5.24411	AR_DHT_Control	chr2	36779453	36779719	-205413810	-	L1PA11	LINE	L1	-1	6173	5903	1
1914	chr2	38767184	38767185	chunk0096_437_1	9.06209	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	38767107	38767288	-203426241	+	MIR	SINE	MIR	3	198	-64	1
1915	chr2	39876100	39876101	chunk0096_454_1	13.2288	AR_DHT_Control	chr2	39875845	39876248	-202317281	-	MER92A	LTR	ERV1	0	412	1	1
1916	chr2	28089661	28089662	chunk0096_94_1	23.6389	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	28089514	28089715	-214103814	-	MIRb	SINE	MIR	-38	230	31	1
1917	chr2	28155100	28155101	chunk0096_96_1	23.7999	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	28155038	28155239	-214038290	-	Tigger16a	DNA	TcMar-Tigger	-192	765	545	1
1918	chr2	41860668	41860669	chunk0097_15_1	11.1999	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	41860441	41861146	-200332383	-	Zaphod	DNA	hAT-Tip100	-1779	2252	1526	1
1919	chr2	48733010	48733011	chunk0097_161_1	9.06209	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	48732949	48733193	-193460336	+	UCON29	DNA	PiggyBac?	20	263	-176	1
1920	chr2	49694860	49694861	chunk0097_169_1	13.2288	AR_DHT_Control	chr2	49694696	49694929	-192498600	-	MLT1H1	LTR	ERVL-MaLR	-301	254	6	1
1921	chr2	49701701	49701702	chunk0097_171_1	33.92089	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	49701670	49701831	-192491698	-	L1ME3E	LINE	L1	-296	5946	5777	1
1922	chr2	53561328	53561329	chunk0097_239_1	32.13371	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	53560679	53561784	-188631745	+	L1ME3A	LINE	L1	4933	6101	-72	1
1923	chr2	54990340	54990341	chunk0097_278_1	59.3143	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	54990163	54990409	-187203120	+	L1MA7	LINE	L1	6018	6286	-5	1
1924	chr2	56208589	56208590	chunk0097_311_1	37.4463	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	56208491	56208672	-185984857	-	LTR89	LTR	ERVL?	-31	848	674	1
1925	chr2	56444693	56444694	chunk0097_316_1	9.21264	AR_DHT_Control	chr2	56444626	56444910	-185748619	+	LTR88a	LTR	Gypsy?	375	656	-160	1
1926	chr2	58081266	58081267	chunk0097_339_1	133.6459	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	58081059	58081401	-184112128	-	Kanga1	DNA	TcMar-Tc2	-1366	379	10	1
1927	chr2	60331221	60331222	chunk0097_357_1	34.45029	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	60330859	60331909	-181861620	+	Tigger2b_Pri	DNA	TcMar-Tigger	1	1068	0	2
1928	chr2	63184095	63184096	chunk0097_422_1	33.924	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	63180199	63186886	-179006643	-	L1PB4	LINE	L1	-2	6857	1	2
1929	chr2	63615331	63615332	chunk0097_431_1	15.57921	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	63615038	63615760	-178577769	+	LTR19C	LTR	ERV1	7	779	0	2
1930	chr2	63872086	63872087	chunk0097_433_1	15.702	AR_DHT_Control	chr2	63871905	63872114	-178321415	-	MER58A	DNA	hAT-Charlie	0	224	1	2
1931	chr2	43410776	43410777	chunk0097_50_1	19.0062	AR_DHT_Control	chr2	43410046	43410891	-198782638	+	L1ME1	LINE	L1	5294	6177	-2	1
1932	chr2	44741025	44741026	chunk0097_80_1	26.94844	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	44740986	44741244	-197452285	+	MER5C1	DNA	hAT-Charlie	2	261	-2	1
1933	chr2	65362912	65362913	chunk0098_14_1	7.29092	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	65362893	65363259	-176830270	+	AluSp	SINE	Alu	1	303	-10	2
1934	chr2	70993469	70993470	chunk0098_171_1	28.0788	AR_DHT_Control	chr2	70993434	70993593	-171199936	-	L2	LINE	L2	-2842	577	423	2
1935	chr2	73090442	73090443	chunk0098_214_1	8.18895	AR_DHT_Control	chr2	73090334	73091072	-169102457	+	L1MC2	LINE	L1	5580	6344	0	2
1936	chr2	73650085	73650086	chunk0098_219_1	10.1791	AR_DHT_Control	chr2	73650025	73650445	-168543084	+	L1ME4a	LINE	L1	5602	6040	-84	2
1937	chr2	73739193	73739194	chunk0098_224_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	73739123	73739389	-168454140	-	MER70-int	LTR	ERVL	0	5023	4753	2
1938	chr2	73853819	73853820	chunk0098_226_1	66.6145	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	73853736	73853829	-168339700	-	L1ME3B	LINE	L1	-56	6186	6093	2
1939	chr2	75062930	75062931	chunk0098_255_1	4.67225	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	75062889	75063228	-167130301	-	THE1B	LTR	ERVL-MaLR	0	364	1	2
1940	chr2	75493449	75493450	chunk0098_275_1	26.99683	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	75493440	75493478	-166700051	+	(TCGCTG)n	Simple_repeat	Simple_repeat	1	42	0	2
1941	chr2	75809291	75809292	chunk0098_289_1	11.1716	AR_DHT_Control	chr2	75809142	75809340	-166384189	-	MIR	SINE	MIR	-42	220	6	2
1942	chr2	75882758	75882759	chunk0098_290_1	14.2738	AR_DHT_Control	chr2	75882476	75882866	-166310663	-	L1ME1	LINE	L1	-82	6097	5679	2
1943	chr2	76008105	76008106	chunk0098_295_1	20.5155	AR_DHT_Control	chr2	76007871	76008515	-166185014	+	LTR9	LTR	ERV1	1	612	0	2
1944	chr2	77690832	77690833	chunk0098_361_1	12.3113	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	77690494	77690944	-164502585	-	L1MEc	LINE	L1	-4158	2242	1770	2
1945	chr2	66161291	66161292	chunk0098_37_1	26.72037	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	66160698	66164138	-176029391	+	L1MEf	LINE	L1	891	4387	-1759	2
1946	chr2	78925632	78925633	chunk0098_374_1	7.3092	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	78925445	78925666	-163267863	+	MIRc	SINE	MIR	34	265	-3	2
1947	chr2	79471956	79471957	chunk0098_386_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	79471904	79473275	-162720254	-	MLT1A0-int	LTR	ERVL-MaLR	-7	1364	46	2
1948	chr2	79523489	79523490	chunk0098_390_1	61.7884	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	79523314	79523974	-162669555	-	L1ME3G	LINE	L1	-226	698	76	2
1949	chr2	79873870	79873871	chunk0098_405_1	6.48643	AR_DHT_Control	chr2	79873616	79873922	-162319607	+	AluJr	SINE	Alu	1	301	-11	2
1950	chr2	79966902	79966903	chunk0098_409_1	18.8646	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	79966670	79967568	-162225961	+	L2	LINE	L2	1956	2849	-570	2
1951	chr2	81868499	81868500	chunk0098_432_1	6.48643	AR_DHT_Control	chr2	81868209	81868780	-160324749	+	LTR10C	LTR	ERV1	4	591	0	2
1952	chr2	82093133	82093134	chunk0098_438_1	33.4561	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	82092934	82093266	-160100263	+	Tigger3a	DNA	TcMar-Tigger	2	348	0	2
1953	chr2	67477619	67477620	chunk0098_82_1	11.1999	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	67477545	67477646	-174715883	+	MER131	DNA?	DNA?	35	141	-74	2
1954	chr2	85725745	85725746	chunk0099_108_1	15.87326	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	85725575	85725756	-156467773	+	HAL1	LINE	L1	793	968	-1539	2
1955	chr2	86191402	86191403	chunk0099_129_1	9.70003	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	86191363	86191622	-156001907	+	MLT2C2	LTR	ERVL	133	412	-52	2
1956	chr2	87136338	87136339	chunk0099_153_1	11.1716	AR_DHT_Control	chr2	87136254	87136475	-155057054	+	L1ME1	LINE	L1	5481	5704	-475	2
1957	chr2	87745585	87745586	chunk0099_156_1	10.1791	AR_DHT_Control	chr2	87745017	87746037	-154447492	+	Tigger2b_Pri	DNA	TcMar-Tigger	2	1068	0	2
1958	chr2	89828615	89828616	chunk0099_177_1	37.79398	SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh;AR_DHT_Control	chr2	89811300	89833976	-152359553	+	(ATTCC)n	Simple_repeat	Simple_repeat	1	23074	0	2
1959	chr2	89833779	89833780	chunk0099_179_1	15.413	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	89811300	89833976	-152359553	+	(ATTCC)n	Simple_repeat	Simple_repeat	1	23074	0	2
1960	chr2	99160876	99160877	chunk0099_306_1	33.5988	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	99160798	99160982	-143032547	+	L1ME4a	LINE	L1	5643	5847	-277	2
1961	chr2	99349682	99349683	chunk0099_308_1	33.9985	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	99349676	99350890	-142842639	-	L1MA6	LINE	L1	-12	6288	4964	2
1962	chr2	99697711	99697712	chunk0099_320_1	29.8756	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	99697694	99697744	-142495785	+	MIR3	SINE	MIR	30	79	-129	2
1963	chr2	99800874	99800875	chunk0099_321_1	10.186	AR_DHT_Control	chr2	99799479	99801006	-142392523	+	L1ME1	LINE	L1	4674	6234	-118	2
1964	chr2	100754886	100754887	chunk0099_357_1	7.14789	AR_DHT_Control	chr2	100754810	100754972	-141438557	-	MLT1L	LTR	ERVL-MaLR	-14	596	419	2
1965	chr2	102120792	102120793	chunk0099_407_1	186.9048	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr2	102120703	102120880	-140072649	+	L2a	LINE	L2	3243	3426	0	2
1966	chr2	102965990	102965991	chunk0099_435_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	102965958	102966431	-139227098	-	MLT1F	LTR	ERVL-MaLR	-35	513	1	2
1967	chr2	85091979	85091980	chunk0099_69_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	85091949	85092311	-157101218	+	Helitron3Na_Mam	RC	Helitron	86	445	-41	2
1968	chr2	85482560	85482561	chunk0099_88_1	10.1791	AR_DHT_Control	chr2	85482277	85482570	-156710959	+	AluSc8	SINE	Alu	1	299	-12	2
1969	chr2	85514482	85514483	chunk0099_90_1	5.82105	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	85514452	85514549	-156678980	-	X6B_LINE	LINE	CR1	-775	297	205	2
1970	chr2	103656764	103656765	chunk0100_1_1	9.76623	AR_DHT_Control	chr2	103656737	103656896	-138536633	-	L2c	LINE	L2	-5	3382	3197	2
1971	chr2	108814131	108814132	chunk0100_139_1	9.34168	AR_DHT_Control	chr2	108813620	108814337	-133379192	-	L1ME2z	LINE	L1	-283	6161	5432	2
1972	chr2	109010009	109010010	chunk0100_149_1	185.1249	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	109009850	109010062	-133183467	-	L1ME4a	LINE	L1	-196	5928	5747	2
1973	chr2	109237385	109237386	chunk0100_162_1	50.73	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	109237299	109237424	-132956105	+	L1M5	LINE	L1	5377	5517	-607	2
1974	chr2	111099046	111099047	chunk0100_195_1	5.31046	AR_DHT_Control	chr2	111098906	111099052	-131094477	-	MIRc	SINE	MIR	-61	207	54	2
1975	chr2	111971069	111971070	chunk0100_222_1	19.69589	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	111970867	111971986	-130221543	-	L1MEc	LINE	L1	-2524	3795	2633	2
1976	chr2	113134287	113134288	chunk0100_253_1	9.87004	AR_DHT_Control	chr2	113134203	113134614	-129058915	+	L1ME3B	LINE	L1	5704	6147	-95	2
1977	chr2	115174880	115174881	chunk0100_299_1	7.36432	AR_DHT_Control	chr2	115174739	115175067	-127018462	+	MamRTE1	LINE	RTE-BovB	3189	3516	-296	2
1978	chr2	115223892	115223893	chunk0100_300_1	8.27376	AR_DHT_Control	chr2	115223762	115223938	-126969591	+	L1ME4a	LINE	L1	5644	5829	-295	2
1979	chr2	116537606	116537607	chunk0100_325_1	20.5155	AR_DHT_Control	chr2	116537429	116538222	-125655307	+	L1ME1	LINE	L1	5322	6164	-15	2
1980	chr2	116665538	116665539	chunk0100_328_1	6.01382	AR_DHT_Control	chr2	116665118	116666203	-125527326	-	L1MB7	LINE	L1	-10	6672	5540	2
1981	chr2	117981850	117981851	chunk0100_371_1	7.08233	AR_DHT_Control	chr2	117981740	117981859	-124211670	-	MER3	DNA	hAT-Charlie	-40	169	40	2
1982	chr2	118301489	118301490	chunk0100_386_1	13.68224	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	118301407	118301522	-123892007	-	L2b	LINE	L2	0	3426	3270	2
1983	chr2	119366219	119366220	chunk0100_406_1	156.517	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr2	119365842	119366263	-122827266	+	L2a	LINE	L2	2831	3408	-18	2
1984	chr2	119757570	119757571	chunk0100_412_1	31.38443	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	119757219	119757887	-122435642	-	Charlie29a	DNA	hAT-Charlie	0	719	4	2
1985	chr2	119828180	119828181	chunk0100_417_1	4.83532	AR_DHT_Control	chr2	119827884	119828307	-122365222	+	MLT1G3	LTR	ERVL-MaLR	1	419	-129	2
1986	chr2	120136021	120136022	chunk0100_426_1	17.51121	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	120133185	120140452	-122053077	+	L1MA3	LINE	L1	13	7724	0	2
1987	chr2	106010267	106010268	chunk0100_47_1	72.6449	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	106010218	106010357	-136183172	-	L1MB8	LINE	L1	-2440	312	177	2
1988	chr2	106576617	106576618	chunk0100_70_1	34.60601	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	106576517	106576775	-135616754	+	L1M8	LINE	L1	574	870	-1485	2
1989	chr2	107711473	107711474	chunk0100_84_1	144.2099	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	107711421	107711475	-134482054	+	A-rich	Low_complexity	Low_complexity	1	54	0	2
1990	chr2	125657124	125657125	chunk0101_109_1	9.21264	AR_DHT_Control	chr2	125656955	125657257	-116536272	+	L1MA5A	LINE	L1	5979	6289	-8	2
1991	chr2	126482952	126482953	chunk0101_118_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	126482637	126483632	-115709897	-	LTR28C	LTR	ERV1	0	1077	1	2
1992	chr2	126495475	126495476	chunk0101_119_1	26.89002	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	126494742	126495620	-115697909	+	L1M4	LINE	L1	15	891	-6626	2
1993	chr2	127897759	127897760	chunk0101_145_1	64.4545	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	127897563	127898254	-114295275	+	L1MD1	LINE	L1	5585	6242	0	2
1994	chr2	127907832	127907833	chunk0101_147_1	9.01771	AR_DHT_Control	chr2	127907676	127907982	-114285547	+	L1ME3A	LINE	L1	5821	6142	-31	2
1995	chr2	128249588	128249589	chunk0101_157_1	20.67734	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	128249211	128249625	-113943904	+	L1M5	LINE	L1	5357	5793	-651	2
1996	chr2	128579431	128579432	chunk0101_162_1	19.5688	AR_DHT_Control	chr2	128579164	128579606	-113613923	+	LTR24	LTR	ERV1	1	467	0	2
1997	chr2	129036166	129036167	chunk0101_169_1	4.83532	AR_DHT_Control	chr2	129035980	129036207	-113157322	+	L1MD	LINE	L1	3797	3975	-2171	2
1998	chr2	129101254	129101255	chunk0101_174_1	187.5804	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr2	129101188	129101260	-113092269	+	MIRc	SINE	MIR	76	153	-55	2
1999	chr2	129826388	129826389	chunk0101_195_1	32.55086	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	129826168	129826449	-112367080	+	L1MA5	LINE	L1	6019	6300	0	2
2000	chr2	130241216	130241217	chunk0101_208_1	7.36432	AR_DHT_Control	chr2	130241163	130241258	-111952271	+	L2c	LINE	L2	3264	3381	-6	2
2001	chr2	130852266	130852267	chunk0101_221_1	4.33257	AR_DHT_Control	chr2	130852096	130852415	-111341114	-	L2b	LINE	L2	-1	3374	3047	2
2002	chr2	131105054	131105055	chunk0101_227_1	6.14829	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	131104659	131105113	-111088416	-	L1MC3	LINE	L1	-589	7196	6710	2
2003	chr2	131141741	131141742	chunk0101_232_1	13.37151	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	131141729	131142295	-111051234	-	MER6A	DNA	TcMar-Tigger	0	605	1	2
2004	chr2	121635081	121635082	chunk0101_25_1	8.27376	AR_DHT_Control	chr2	121635055	121635229	-120558300	+	FRAM	SINE	Alu	1	167	-9	2
2005	chr2	121873020	121873021	chunk0101_30_1	22.6321	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	121872991	121873078	-120320451	-	MamTip3	DNA	hAT-Tip100	-316	184	98	2
2006	chr2	135536397	135536398	chunk0101_316_1	9.77797	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	135536141	135536446	-106657083	-	AluJo	SINE	Alu	-16	296	1	2
2007	chr2	136072854	136072855	chunk0101_331_1	78.84454	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	136072260	136073225	-106120304	-	HERVK3-int	LTR	ERVK	0	7202	6223	2
2008	chr2	138881769	138881770	chunk0101_402_1	5.6425	AR_DHT_Control	chr2	138881739	138881927	-103311602	+	LTR81A	LTR	Gypsy	109	310	-1040	2
2009	chr2	138942146	138942147	chunk0101_406_1	19.3054	AR_DHT_Control	chr2	138939402	138943113	-103250416	-	L1PA6	LINE	L1	-2458	3688	5	2
2010	chr2	139087155	139087156	chunk0101_409_1	9.87004	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	139085855	139087413	-103106116	-	L1MA7	LINE	L1	0	6291	4747	2
2011	chr2	139157999	139158000	chunk0101_411_1	33.9686	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	139157836	139158035	-103035494	+	MIR	SINE	MIR	61	262	0	2
2012	chr2	139189685	139189686	chunk0101_415_1	95.8001	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	139189583	139189871	-103003658	-	L4_A_Mam	LINE	RTE-X	-183	4807	4538	2
2013	chr2	139252597	139252598	chunk0101_421_1	6.58746	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	139252431	139252726	-102940803	-	HAL1b	LINE	L1	-798	2014	1717	2
2014	chr2	140189939	140189940	chunk0101_456_1	10.8743	AR_DHT_Control	chr2	140189924	140189979	-102003550	+	(TAA)n	Simple_repeat	Simple_repeat	1	56	0	2
2015	chr2	122969301	122969302	chunk0101_47_1	26.4717	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	122969121	122969466	-119224063	-	MLT1A0	LTR	ERVL-MaLR	0	365	13	2
2016	chr2	124084086	124084087	chunk0101_85_1	5.38748	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	124083385	124084269	-118109260	-	L1MD1	LINE	L1	-920	5617	4640	2
2017	chr2	144304231	144304232	chunk0102_101_1	65.7606	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	144303670	144304559	-97888970	+	L1ME1	LINE	L1	28	979	-5330	2
2018	chr2	144693686	144693687	chunk0102_116_1	4.9245	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	144693616	144694040	-97499489	-	L1ME4a	LINE	L1	-49	6075	5601	2
2019	chr2	146642615	146642616	chunk0102_144_1	10.1791	AR_DHT_Control	chr2	146641825	146648001	-95545528	+	L1PA6	LINE	L1	174	6324	-3	2
2020	chr2	141004225	141004226	chunk0102_2_1	70.04	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	141004172	141004673	-101188856	+	MLT2B4	LTR	ERVL	1	556	0	2
2021	chr2	148705585	148705586	chunk0102_227_1	16.4778	AR_DHT_Control	chr2	148705457	148710905	-93482624	+	L1PA5	LINE	L1	778	6225	-102	2
2022	chr2	150847694	150847695	chunk0102_302_1	6.6093	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	150847662	150847701	-91345828	+	(TG)n	Simple_repeat	Simple_repeat	1	41	0	2
2023	chr2	151030209	151030210	chunk0102_308_1	13.2288	AR_DHT_Control	chr2	151030079	151030591	-91162938	+	Ricksha_c	DNA	MULE-MuDR	1296	1828	-220	2
2024	chr2	158404020	158404021	chunk0102_457_1	4.83532	AR_DHT_Control	chr2	158403933	158404142	-83789387	+	MIRb	SINE	MIR	50	252	-16	2
2025	chr2	142696698	142696699	chunk0102_48_1	23.6387	AR_DHT_Control	chr2	142696086	142697500	-99496029	+	L1PBa	LINE	L1	1881	3385	-3530	2
2026	chr2	142846395	142846396	chunk0102_59_1	9.21264	AR_DHT_Control	chr2	142845755	142846427	-99347102	-	Helitron1Nb_Mam	RC	Helitron	-391	725	51	2
2027	chr2	161617294	161617295	chunk0103_117_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	161617200	161617432	-80576097	+	MIR	SINE	MIR	5	250	-12	2
2028	chr2	161933729	161933730	chunk0103_126_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	161933698	161934017	-80259512	-	L1MA8	LINE	L1	-508	5783	5488	2
2029	chr2	162084802	162084803	chunk0103_136_1	194.5576	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh	chr2	162084546	162087396	-80106133	-	MER34-int	LTR	ERV1	0	8207	5265	2
2030	chr2	162155068	162155069	chunk0103_145_1	4.77556	AR_DHT_Control	chr2	162154799	162155425	-80038104	+	L1ME4b	LINE	L1	208	882	-10	2
2031	chr2	162733032	162733033	chunk0103_171_1	5.75839	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	162732899	162733039	-79460490	+	Charlie8	DNA	hAT-Charlie	38	180	-2248	2
2032	chr2	163159045	163159046	chunk0103_176_1	7.22796	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	163157988	163159154	-79034375	-	Tigger3b	DNA	TcMar-Tigger	-4	1227	1	2
2033	chr2	164514731	164514732	chunk0103_224_1	8.27376	AR_DHT_Control	chr2	164514193	164516347	-77677182	+	L1PB1	LINE	L1	263	2438	-4425	2
2034	chr2	164551744	164551745	chunk0103_227_1	52.5381	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	164551579	164551814	-77641715	+	L2c	LINE	L2	3007	3250	-125	2
2035	chr2	165369225	165369226	chunk0103_256_1	6.9031	AR_DHT_Control	chr2	165368942	165369228	-76824301	-	AluSz6	SINE	Alu	-25	287	1	2
2036	chr2	166655193	166655194	chunk0103_301_1	20.6297	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	166655118	166655978	-75537551	-	MER4D1	LTR	ERV1	-9	891	1	2
2037	chr2	168678792	168678793	chunk0103_383_1	36.45511	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	168678787	168679466	-73514063	+	L1MA6	LINE	L1	5598	6295	-5	2
2038	chr2	168999387	168999388	chunk0103_393_1	6.37162	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	168999358	169000000	-73193529	-	L1MD1	LINE	L1	-107	6135	5479	2
2039	chr2	169415378	169415379	chunk0103_410_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	169415197	169415504	-72778025	-	MLT1G3	LTR	ERVL-MaLR	-104	491	176	2
2040	chr2	169566043	169566044	chunk0103_415_1	14.53202	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	169565561	169566165	-72627364	-	L1MA1	LINE	L1	-520	5782	5168	2
2041	chr2	169665680	169665681	chunk0103_417_1	9.21264	AR_DHT_Control	chr2	169665502	169665916	-72527613	-	MER83	LTR	ERV1	0	448	1	2
2042	chr2	169695953	169695954	chunk0103_419_1	15.75268	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	169695653	169696042	-72497487	-	LTR40b	LTR	ERVL	-2	460	1	2
2043	chr2	169715595	169715596	chunk0103_420_1	18.4752	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	169714793	169717187	-72476342	-	HERVL18-int	LTR	ERVL	-3595	2452	2	2
2044	chr2	169922502	169922503	chunk0103_431_1	4.60172	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	169922435	169922795	-72270734	-	L1MB2	LINE	L1	-2	6169	5810	2
2045	chr2	169951473	169951474	chunk0103_435_1	22.92281	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	169951446	169951576	-72241953	-	L2c	LINE	L2	-78	3309	3180	2
2046	chr2	169964925	169964926	chunk0103_436_1	23.6592	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	169964780	169964975	-72228554	-	LTR101_Mam	LTR	ERVL	0	829	612	2
2047	chr2	170255336	170255337	chunk0103_451_1	41.07155	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	170253895	170260728	-71932801	+	L1PA16	LINE	L1	1	8160	-1	2
2048	chr2	159400065	159400066	chunk0103_48_1	32.16631	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	159399725	159400117	-82793412	-	Tigger15a	DNA	TcMar-Tigger	-4	711	301	2
2049	chr2	161278825	161278826	chunk0103_99_1	15.13612	SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr2	161278580	161278835	-80914694	-	L1MB8	LINE	L1	-108	6070	5839	2
2050	chr2	174569970	174569971	chunk0104_173_1	60.88065	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr2	174569902	174570455	-67623074	+	L1ME4a	LINE	L1	5524	6124	0	2
2051	chr2	170564633	170564634	chunk0104_19_1	12.1095	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	170564606	170564705	-71628824	+	L1M5	LINE	L1	5536	5635	-489	2
2052	chr2	175226149	175226150	chunk0104_193_1	16.319	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	175225968	175226259	-66967270	-	L1MC5	LINE	L1	-984	8320	8016	2
2053	chr2	176317419	176317420	chunk0104_216_1	12.74736	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	176317371	176318222	-65875307	-	HAL1	LINE	L1	-1536	971	6	2
2054	chr2	178438537	178438538	chunk0104_291_1	34.3933	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	178438360	178438681	-63754848	-	L1M5	LINE	L1	-1207	4939	4611	2
2055	chr2	179417703	179417704	chunk0104_324_1	4.83532	AR_DHT_Control	chr2	179417345	179417749	-62775780	+	MLT1H2	LTR	ERVL-MaLR	79	676	-4	2
2056	chr2	179612333	179612334	chunk0104_337_1	7.97574	AR_DHT_Control	chr2	179611953	179614303	-62579226	-	L1MA3	LINE	L1	-5158	2407	17	2
2057	chr2	180314381	180314382	chunk0104_380_1	8.02791	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	180314378	180314624	-61878905	-	MIR	SINE	MIR	-1	261	7	2
2058	chr2	180609649	180609650	chunk0104_397_1	9.90105	AR_DHT_Control	chr2	180609563	180609820	-61583709	+	MIR	SINE	MIR	1	249	-13	2
2059	chr2	180715379	180715380	chunk0104_405_1	103.92	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	180715262	180715400	-61478129	-	L2a	LINE	L2	-1	3425	3304	2
2060	chr2	171154648	171154649	chunk0104_44_1	9.14794	AR_DHT_Control	chr2	171154541	171154688	-71038841	-	MIRc	SINE	MIR	-48	160	2	2
2061	chr2	171863953	171863954	chunk0104_79_1	24.67913	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	171863951	171864052	-70329477	-	L2a	LINE	L2	-12	3414	3311	2
2062	chr2	171956636	171956637	chunk0104_83_1	11.1147	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	171956549	171957669	-70235860	+	MLT1D-int	LTR	ERVL-MaLR	290	1357	-14	2
2063	chr2	172270125	172270126	chunk0104_94_1	20.16759	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	172264705	172270864	-69922665	-	L1PA6	LINE	L1	-1	6153	6	2
2064	chr2	186624109	186624110	chunk0105_155_1	61.3203	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	186623075	186624255	-55569274	+	L2b	LINE	L2	1803	3135	-252	2
2065	chr2	188072362	188072363	chunk0105_220_1	5.6503	SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	188072182	188072955	-54120574	+	LTR1F1	LTR	ERV1	1	729	0	2
2066	chr2	188339639	188339640	chunk0105_233_1	36.87061	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	188339612	188339661	-53853868	+	MSTA	LTR	ERVL-MaLR	318	366	-62	2
2067	chr2	189424719	189424720	chunk0105_269_1	34.4716	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	189423053	189425138	-52768391	+	L1MA6	LINE	L1	4269	6399	-1163	2
2068	chr2	191093191	191093192	chunk0105_332_1	44.13827	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	191092576	191098769	-51094760	+	L1PA6	LINE	L1	177	6326	-1	2
2069	chr2	191358517	191358518	chunk0105_346_1	11.9693	AR_DHT_Control	chr2	191358375	191358603	-50834926	-	MamRTE1	LINE	RTE-BovB	-16	3796	3529	2
2070	chr2	182884825	182884826	chunk0105_38_1	25.23518	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	182883584	182884963	-59308566	-	L1MB7	LINE	L1	-8	6176	4846	2
2071	chr2	192566385	192566386	chunk0105_399_1	22.9019	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	192565885	192568492	-49625037	+	L1MC3	LINE	L1	5524	8133	-70	2
2072	chr2	181660209	181660210	chunk0105_4_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	181660023	181660345	-60533184	-	MER1B	DNA	hAT-Charlie	0	339	2	2
2073	chr2	192813988	192813989	chunk0105_409_1	31.45092	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	192813292	192814196	-49379333	-	L1MC2	LINE	L1	-1	6343	5446	2
2074	chr2	192930563	192930564	chunk0105_416_1	37.6708	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	192925167	192931291	-49262238	-	L1PA6	LINE	L1	-3	6151	9	2
2075	chr2	195125456	195125457	chunk0105_453_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	195124664	195126492	-47067037	-	MER52A	LTR	ERV1	0	1755	1	2
2076	chr2	183650485	183650486	chunk0105_68_1	5.93091	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	183650248	183650638	-58542891	-	MLT1J	LTR	ERVL-MaLR	-30	482	77	2
2077	chr2	183998260	183998261	chunk0105_86_1	4.96282	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	183998219	183998572	-58194957	+	L2a	LINE	L2	3034	3399	-27	2
2078	chr2	197878999	197879000	chunk0106_120_1	48.1893	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	197878847	197879151	-44314378	+	MER102b	DNA	hAT-Charlie	3	332	-9	2
2079	chr2	200203690	200203691	chunk0106_143_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	200203459	200204035	-41989494	+	MER51B	LTR	ERV1	1	634	0	2
2080	chr2	200425471	200425472	chunk0106_151_1	7.7606	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	200425438	200425649	-41767880	+	MIRb	SINE	MIR	26	246	-22	2
2081	chr2	202449581	202449582	chunk0106_212_1	6.7912	AR_DHT_Control	chr2	202449361	202449815	-39743714	+	MER68	LTR	ERVL	32	470	-93	2
2082	chr2	202588829	202588830	chunk0106_225_1	7.30485	AR_DHT_Control	chr2	202587921	202589640	-39603889	-	L1PA17	LINE	L1	-4607	2246	699	2
2083	chr2	202634741	202634742	chunk0106_231_1	6.39136	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	202634737	202634771	-39558758	+	(AC)n	Simple_repeat	Simple_repeat	1	34	0	2
2084	chr2	203464881	203464882	chunk0106_249_1	7.36432	AR_DHT_Control	chr2	203464689	203465605	-38727924	+	L1MC1	LINE	L1	5186	6115	-218	2
2085	chr2	203813138	203813139	chunk0106_270_1	4.6472	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	203812822	203813393	-38380136	-	L1MB4	LINE	L1	0	6180	5581	2
2086	chr2	204418433	204418434	chunk0106_292_1	22.53978	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	204418064	204418592	-37774937	+	L1ME1	LINE	L1	5648	6178	-1	2
2087	chr2	195968332	195968333	chunk0106_30_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	195967889	195969223	-46224306	-	L1MA3	LINE	L1	-5938	1627	17	2
2088	chr2	205187246	205187247	chunk0106_315_1	17.3925	AR_DHT_Control	chr2	205186955	205187350	-37006179	-	L2c	LINE	L2	-36	3351	2954	2
2089	chr2	205498704	205498705	chunk0106_319_1	9.69227	SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	205498635	205499041	-36694488	+	L2c	LINE	L2	2975	3364	-23	2
2090	chr2	205972177	205972178	chunk0106_332_1	23.59744	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	205971890	205972201	-36221328	+	LTR49-int	LTR	ERV1	2948	3272	-3059	2
2091	chr2	207268412	207268413	chunk0106_376_1	204.1398	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	207268380	207268563	-34924966	+	L2a	LINE	L2	3246	3424	-2	2
2092	chr2	207316763	207316764	chunk0106_380_1	4.42675	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	207316714	207317142	-34876387	-	MER65A	LTR	ERV1	0	445	1	2
2093	chr2	208279655	208279656	chunk0106_427_1	49.7073	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	208278421	208279805	-33913724	-	L1PA16	LINE	L1	-9	6157	4748	2
2094	chr2	196977765	196977766	chunk0106_70_1	37.7072	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	196977245	196978058	-45215471	+	L1MB7	LINE	L1	4993	5840	-344	2
2095	chr2	214155427	214155428	chunk0107_107_1	6.33484	AR_DHT_Control	chr2	214155334	214155509	-28038020	+	MER58A	DNA	hAT-Charlie	5	188	-36	2
2096	chr2	214753187	214753188	chunk0107_131_1	48.8635	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	214753133	214753248	-27440281	-	MIR3	SINE	MIR	-3	205	85	2
2097	chr2	214811047	214811048	chunk0107_136_1	5.86499	SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	214810986	214811398	-27382131	+	L2b	LINE	L2	2932	3374	-1	2
2098	chr2	215207147	215207148	chunk0107_156_1	191.9963	SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	215206885	215207700	-26985829	+	MER4-int	LTR	ERV1	1549	2353	-4245	2
2099	chr2	215794707	215794708	chunk0107_181_1	15.26754	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	215794355	215794774	-26398755	+	MER31B	LTR	ERV1	3	466	0	2
2100	chr2	216560597	216560598	chunk0107_205_1	32.1704	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	216560520	216560654	-25632875	+	UCON47	Unknown	Unknown	28	159	-6	2
2101	chr2	216621464	216621465	chunk0107_211_1	91.959	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	216621418	216621635	-25571894	+	MER58A	DNA	hAT-Charlie	1	223	-1	2
2102	chr2	217510885	217510886	chunk0107_265_1	7.53988	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	217509331	217511072	-24682457	-	L1MC4	LINE	L1	-3827	2388	529	2
2103	chr2	218217217	218217218	chunk0107_278_1	4.83664	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	218217197	218217234	-23976295	+	(GCG)n	Simple_repeat	Simple_repeat	1	38	0	2
2104	chr2	210410529	210410530	chunk0107_28_1	10.7301	AR_DHT_Control	chr2	210409029	210411382	-31782147	-	Tigger1	DNA	TcMar-Tigger	0	2418	1	2
2105	chr2	219836810	219836811	chunk0107_319_1	8.76676	AR_DHT_Control	chr2	219836428	219836891	-22356638	-	L1MB4	LINE	L1	-41	6139	5685	2
2106	chr2	220325939	220325940	chunk0107_329_1	27.4631	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	220325704	220325954	-21867575	+	MIR	SINE	MIR	8	262	0	2
2107	chr2	220469297	220469298	chunk0107_331_1	21.00937	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	220469290	220469495	-21724034	+	MER58A	DNA	hAT-Charlie	1	215	-9	2
2108	chr2	222713341	222713342	chunk0107_360_1	4.83532	AR_DHT_Control	chr2	222713328	222713424	-19480105	+	MamSINE1	SINE	tRNA-RTE	161	255	-35	2
2109	chr2	223258867	223258868	chunk0107_381_1	21.46892	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	223256751	223259553	-18933976	-	L1P2	LINE	L1	-3364	2955	176	2
2110	chr2	225449277	225449278	chunk0107_448_1	24.7681	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	225449218	225449356	-16744173	+	MIRb	SINE	MIR	102	253	-15	2
2111	chr2	225471658	225471659	chunk0107_449_1	7.36432	AR_DHT_Control	chr2	225471614	225471862	-16721667	-	MIRb	SINE	MIR	-8	260	2	2
2112	chr2	225670612	225670613	chunk0107_453_1	12.73	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	225670605	225670631	-16522898	+	(A)n	Simple_repeat	Simple_repeat	1	26	0	2
2113	chr2	212282789	212282790	chunk0107_72_1	21.712	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	212282629	212282793	-29910736	+	MER5A	DNA	hAT-Charlie	2	183	-6	2
2114	chr2	230222960	230222961	chunk0108_131_1	5.99044	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	230222710	230222970	-11970559	-	L1ME2	LINE	L1	-108	6056	5813	2
2115	chr2	230347155	230347156	chunk0108_133_1	16.8372	AR_DHT_Control	chr2	230344695	230347350	-11846179	-	L1M2	LINE	L1	-3182	3660	1338	2
2116	chr2	230850572	230850573	chunk0108_145_1	11.1716	AR_DHT_Control	chr2	230850529	230850810	-11342719	+	L1ME4a	LINE	L1	5536	5824	-300	2
2117	chr2	232189031	232189032	chunk0108_181_1	17.693	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	232188388	232189911	-10003618	+	L1MD2	LINE	L1	4802	6356	-3	2
2118	chr2	232283098	232283099	chunk0108_190_1	20.58628	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	232283092	232283257	-9910272	-	MIRb	SINE	MIR	0	268	65	2
2119	chr2	233144431	233144432	chunk0108_209_1	6.71486	SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	233143841	233144825	-9048704	+	(GTGATG)n	Simple_repeat	Simple_repeat	5	1013	0	2
2120	chr2	233495267	233495268	chunk0108_220_1	5.9324	AR_DHT_Control	chr2	233495026	233495300	-8698229	+	L1ME4b	LINE	L1	437	720	-172	2
2121	chr2	233608115	233608116	chunk0108_231_1	6.48643	AR_DHT_Control	chr2	233608092	233608500	-8585029	-	MSTB1	LTR	ERVL-MaLR	0	432	1	2
2122	chr2	233710504	233710505	chunk0108_234_1	4.78811	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	233709738	233710899	-8482630	-	L1ME1	LINE	L1	-5	6174	5006	2
2123	chr2	233736795	233736796	chunk0108_237_1	27.24264	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	233734111	233737684	-8455845	-	L1PA6	LINE	L1	-2603	3543	12	2
2124	chr2	233853277	233853278	chunk0108_243_1	6.18774	AR_DHT_Control	chr2	233853033	233853308	-8340221	+	LTR82A	LTR	ERVL	521	830	-42	2
2125	chr2	234406364	234406365	chunk0108_271_1	14.2024	AR_DHT_Control	chr2	234406191	234406366	-7787163	+	L1ME3B	LINE	L1	5628	5802	-440	2
2126	chr2	234928481	234928482	chunk0108_291_1	9.38051	SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	234928437	234928542	-7264987	-	MLT1N2	LTR	ERVL-MaLR	-3	559	444	2
2127	chr2	235541190	235541191	chunk0108_319_1	84.6992	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	235541180	235541351	-6652178	-	L1ME3D	LINE	L1	-29	6213	6035	2
2128	chr2	236569897	236569898	chunk0108_361_1	5.37183	AR_DHT_Control	chr2	236569855	236569919	-5623610	+	(AGCC)n	Simple_repeat	Simple_repeat	1	66	0	2
2129	chr2	236586077	236586078	chunk0108_364_1	7.09019	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	236586001	236586184	-5607345	+	MIRb	SINE	MIR	81	259	-9	2
2130	chr2	237235717	237235718	chunk0108_394_1	5.18995	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	237234940	237236031	-4957498	-	ERVL-E-int	LTR	ERVL	-1946	3721	2560	2
2131	chr2	237509992	237509993	chunk0108_411_1	5.30168	AR_DHT_Control	chr2	237509843	237510275	-4683254	+	L4_B_Mam	LINE	RTE-X	3628	4103	-838	2
2132	chr2	237996071	237996072	chunk0108_435_1	6.37162	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	237995974	237996272	-4197257	-	Tigger15a	DNA	TcMar-Tigger	-22	693	386	2
2133	chr2	238392245	238392246	chunk0108_457_1	24.8955	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	238392211	238392574	-3800955	-	L1MD1	LINE	L1	-63	6179	5829	2
2134	chr2	238436145	238436146	chunk0108_460_1	16.34725	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	238436050	238436299	-3757230	-	L1MEd	LINE	L1	-2849	3297	3038	2
2135	chr2	226002590	226002591	chunk0108_9_1	4.24079	AR_DHT_Control	chr2	226002587	226002696	-16190833	+	MamRep605	LTR?	LTR?	423	533	-316	2
2136	chr20	2846528	2846529	chunk0109_123_1	22.30938	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	2846416	2846553	-61597614	-	L1MB2	LINE	L1	-500	5671	5522	2
2137	chr20	3632718	3632719	chunk0109_148_1	4.44156	AR_DHT_Control	chr20	3632220	3632835	-60811332	+	L2a	LINE	L2	2686	3388	-38	2
2138	chr20	366603	366604	chunk0109_16_1	11.7904	AR_DHT_Control	chr20	366412	366922	-64077245	+	L1ME4b	LINE	L1	377	926	-1851	2
2139	chr20	61737	61738	chunk0109_2_1	15.04828	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	60220	63215	-64380952	+	(ATTCC)n	Simple_repeat	Simple_repeat	2	3000	0	2
2140	chr20	446109	446110	chunk0109_22_1	4.67225	AR_DHT_Control	chr20	446024	446114	-63998053	+	L2c	LINE	L2	3286	3387	0	2
2141	chr20	461060	461061	chunk0109_23_1	5.23393	AR_DHT_Control	chr20	461019	461082	-63983085	+	A-rich	Low_complexity	Low_complexity	1	63	0	2
2142	chr20	6311628	6311629	chunk0109_249_1	6.58746	SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	6311072	6314651	-58129516	+	L1PA15-16	LINE	L1	12	3219	-3630	2
2143	chr20	461633	461634	chunk0109_25_1	21.52647	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	461380	461661	-63982506	-	AluJr4	SINE	Alu	-28	284	1	2
2144	chr20	6444821	6444822	chunk0109_251_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	6444766	6444977	-57999190	-	MER6B	DNA	TcMar-Tigger	0	210	1	2
2145	chr20	8132204	8132205	chunk0109_282_1	5.56779	AR_DHT_Control	chr20	8132150	8132248	-56311919	+	G-rich	Low_complexity	Low_complexity	1	98	0	2
2146	chr20	8837665	8837666	chunk0109_308_1	10.0307	AR_DHT_Control	chr20	8836474	8839500	-55604667	+	ERVL-B4-int	LTR	ERVL	5	3155	-2559	2
2147	chr20	9075891	9075892	chunk0109_315_1	151.143	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	9075563	9075915	-55368252	-	MER102b	DNA	hAT-Charlie	-12	319	1	2
2148	chr20	9129430	9129431	chunk0109_318_1	8.41723	AR_DHT_Control	chr20	9129183	9129558	-55314609	+	LTR16C	LTR	ERVL	65	479	-10	2
2149	chr2	238802037	238802038	chunk0109_345_1	4.75321	AR_DHT_Control	chr2	238801833	238802095	-3391434	+	Tigger3b	DNA	TcMar-Tigger	965	1231	0	2
2150	chr20	571310	571311	chunk0109_35_1	5.73594	AR_DHT_Control	chr20	571187	571589	-63872578	-	Charlie4a	DNA	hAT-Charlie	-74	434	1	2
2151	chr2	239208712	239208713	chunk0109_360_1	5.40815	AR_DHT_Control	chr2	239208356	239208885	-2984644	+	L1ME3Cz	LINE	L1	3828	4481	-1665	2
2152	chr2	239317223	239317224	chunk0109_367_1	94.8826	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	239316630	239317719	-2875810	+	L1MC4	LINE	L1	5801	7132	-910	2
2153	chr2	239723798	239723799	chunk0109_379_1	5.12066	AR_DHT_Control	chr2	239723769	239723934	-2469595	+	(TG)n	Simple_repeat	Simple_repeat	1	164	0	2
2154	chr2	240039701	240039702	chunk0109_386_1	24.46556	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	240034679	240040387	-2153142	-	L1MA4	LINE	L1	-744	6975	1243	2
2155	chr2	240379311	240379312	chunk0109_402_1	57.38408	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	240379055	240379486	-1814043	+	L2	LINE	L2	2539	3064	-355	2
2156	chr2	241174072	241174073	chunk0109_421_1	25.2327	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	241173408	241174668	-1018861	-	L1MEc	LINE	L1	-934	1818	117	2
2157	chr2	241833430	241833431	chunk0109_454_1	17.48052	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	241833198	241833670	-359859	+	L1MC1	LINE	L1	5390	5886	-447	2
2158	chr20	1366667	1366668	chunk0109_62_1	6.0927	SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	1366666	1366914	-63077253	+	L1ME4c	LINE	L1	514	763	-67	2
2159	chr20	1381611	1381612	chunk0109_64_1	27.67511	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	1380896	1381938	-63062229	+	L1ME1	LINE	L1	4916	6018	-161	2
2160	chr20	1401514	1401515	chunk0109_66_1	6.44773	AR_DHT_Control	chr20	1401325	1402259	-63041908	+	HERVK3-int	LTR	ERVK	6280	7200	-2	2
2161	chr20	1427991	1427992	chunk0109_68_1	25.47082	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr20	1427226	1428375	-63015792	+	L1MD2	LINE	L1	28	1255	-5385	2
2162	chr20	2265086	2265087	chunk0109_98_1	128.1091	Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	2264447	2270606	-62173561	+	L1PA6	LINE	L1	5	6149	-5	2
2163	chr20	12113707	12113708	chunk0110_113_1	5.14593	SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	12113392	12113898	-52330269	-	MLT1E3	LTR	ERVL-MaLR	-5	619	139	2
2164	chr20	13701679	13701680	chunk0110_148_1	101.06233	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	13701214	13701682	-50742485	-	MLT1J	LTR	ERVL-MaLR	-1	511	18	2
2165	chr20	13946893	13946894	chunk0110_157_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	13946507	13948126	-50496041	+	MER52A	LTR	ERV1	1	1755	0	2
2166	chr20	14851801	14851802	chunk0110_200_1	4.83532	AR_DHT_Control	chr20	14851753	14851868	-49592299	-	MIR	SINE	MIR	-70	192	53	2
2167	chr20	15954893	15954894	chunk0110_229_1	9.13774	SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	15954795	15955001	-48489166	-	MIR	SINE	MIR	-6	256	51	2
2168	chr20	17594605	17594606	chunk0110_282_1	7.97093	AR_DHT_Control	chr20	17594511	17594694	-46849473	-	MLT1J1	LTR	ERVL-MaLR	-272	176	8	2
2169	chr20	19106616	19106617	chunk0110_325_1	5.69781	AR_DHT_Control	chr20	19106503	19106741	-45337426	-	MIRb	SINE	MIR	-24	244	12	2
2170	chr20	19891055	19891056	chunk0110_366_1	39.2765	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	19890696	19891197	-44552970	-	MER110	LTR	ERV1	-19	472	1	2
2171	chr20	20102779	20102780	chunk0110_386_1	29.85983	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	20102689	20102811	-44341356	+	LTR16C	LTR	ERVL	350	463	-26	2
2172	chr20	20150766	20150767	chunk0110_388_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	20149330	20151544	-44292623	+	L1PB1	LINE	L1	1	2274	-4589	2
2173	chr20	20816292	20816293	chunk0110_431_1	11.26682	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	20815473	20816343	-43627824	-	MER4D1	LTR	ERV1	-42	858	1	2
2174	chr20	20991436	20991437	chunk0110_440_1	6.0927	AR_DHT_Control	chr20	20991351	20991464	-43452703	-	LTR16C	LTR	ERVL	-51	438	332	2
2175	chr20	21310051	21310052	chunk0110_458_1	5.59693	SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	21309646	21310727	-43133440	-	L1ME1	LINE	L1	-2762	3557	2390	2
2176	chr20	11225420	11225421	chunk0110_84_1	4.77556	AR_DHT_Control	chr20	11225385	11225571	-53218596	-	LTR78	LTR	ERV1	-1049	255	67	2
2177	chr20	11353665	11353666	chunk0110_92_1	6.94032	AR_DHT_Control	chr20	11353051	11353798	-53090369	+	LTR1B	LTR	ERV1	1	824	0	2
2178	chr20	21818396	21818397	chunk0111_10_1	17.2212	AR_DHT_Control	chr20	21818063	21818543	-42625624	-	L1ME1	LINE	L1	-75	6104	5599	2
2179	chr20	23756416	23756417	chunk0111_109_1	15.1335	AR_DHT_Control	chr20	23756279	23757247	-40686920	-	LTR5_Hs	LTR	ERVK	0	968	1	2
2180	chr20	23866879	23866880	chunk0111_112_1	7.97574	AR_DHT_Control	chr20	23866830	23867015	-40577152	-	L1MA8	LINE	L1	-271	6020	5827	2
2181	chr20	23983469	23983470	chunk0111_116_1	10.1791	AR_DHT_Control	chr20	23982640	23983609	-40460558	+	LTR5_Hs	LTR	ERVK	1	968	0	2
2182	chr20	25116178	25116179	chunk0111_158_1	20.1876	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	25116147	25116232	-39327935	+	LTR16A1	LTR	ERVL	61	147	-309	2
2183	chr20	25190692	25190693	chunk0111_162_1	95.9221	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	25190595	25190762	-39253405	-	LTR16C	LTR	ERVL	0	489	303	2
2184	chr20	25384809	25384810	chunk0111_187_1	50.427	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	25384783	25384913	-39059254	+	Charlie8	DNA	hAT-Charlie	134	263	-2165	2
2185	chr20	25395244	25395245	chunk0111_189_1	6.94497	AR_DHT_Control	chr20	25394631	25397542	-39046625	-	HERVK3-int	LTR	ERVK	-2	7200	4253	2
2186	chr20	21741671	21741672	chunk0111_2_1	19.96902	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	21741330	21741845	-42702322	-	L1MEf	LINE	L1	-4242	1958	1472	2
2187	chr20	28816520	28816521	chunk0111_212_1	5.44741	SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	28794428	28820603	-35623564	-	ALR/Alpha	Satellite	centr	0	26266	1	2
2188	chr20	28842792	28842793	chunk0111_214_1	59.75374	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	28834094	28843401	-35600766	+	ALR/Alpha	Satellite	centr	1	9305	0	2
2189	chr20	28860259	28860260	chunk0111_216_1	19.6611	Merged_Lncap_AR_Veh	chr20	28859998	28861347	-35582820	-	ALR/Alpha	Satellite	centr	-57	1351	1	2
2190	chr20	28887931	28887932	chunk0111_217_1	5.77445	SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	28881198	28889070	-35555097	-	ALR/Alpha	Satellite	centr	-24	7907	1	2
2191	chr20	28898435	28898436	chunk0111_222_1	19.14723	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	28897894	28898964	-35545203	+	(CCATT)n	Simple_repeat	Simple_repeat	2	1073	0	2
2192	chr20	28905399	28905400	chunk0111_223_1	10.7729	Merged_Lncap_AR_Veh	chr20	28900878	28913954	-35530213	+	ALR/Alpha	Satellite	centr	1	13117	0	2
2193	chr20	28956223	28956224	chunk0111_224_1	9.29973	Merged_Lncap_AR_Veh	chr20	28937103	28957213	-35486954	+	ALR/Alpha	Satellite	centr	1	20176	0	2
2194	chr20	29262933	29262934	chunk0111_232_1	49.98757	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr20	29255343	29271546	-35172621	+	ALR/Alpha	Satellite	centr	1	16238	0	2
2195	chr20	29438481	29438482	chunk0111_237_1	5.13456	SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	29438329	29438769	-35005398	+	BSR/Beta	Satellite	Satellite	1	445	-71	2
2196	chr20	29458486	29458487	chunk0111_238_1	11.0171	SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	29457766	29459075	-34985092	-	LTR53-int	LTR	ERVL	-129	3200	1859	2
2197	chr20	29883976	29883977	chunk0111_246_1	18.67795	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr20	29883918	29884004	-34560163	+	(CA)n	Simple_repeat	Simple_repeat	1	91	0	2
2198	chr20	29885821	29885822	chunk0111_247_1	20.38226	Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	29884850	29900750	-34543417	-	ALR/Alpha	Satellite	centr	-69	15917	1	2
2199	chr20	30519658	30519659	chunk0111_252_1	13.2288	AR_DHT_Control	chr20	30519544	30520660	-33923507	-	ACRO1	Satellite	acro	-55	1121	1	2
2200	chr20	31052134	31052135	chunk0111_258_1	16.4185	SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	31051526	31057333	-33386834	+	(TGGAA)n	Simple_repeat	Simple_repeat	1	5927	0	2
2201	chr20	31055182	31055183	chunk0111_260_1	29.15023	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr20	31051526	31057333	-33386834	+	(TGGAA)n	Simple_repeat	Simple_repeat	1	5927	0	2
2202	chr20	31060517	31060518	chunk0111_263_1	64.46335	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	31055341	31106882	-33337285	+	(GGAAT)n	Simple_repeat	Simple_repeat	1	52344	0	2
2203	chr20	31068324	31068325	chunk0111_265_1	102.6228	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh;AR_DHT_Control	chr20	31055341	31106882	-33337285	+	(GGAAT)n	Simple_repeat	Simple_repeat	1	52344	0	2
2204	chr20	31074303	31074304	chunk0111_268_1	50.71237	Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr20	31055341	31106882	-33337285	+	(GGAAT)n	Simple_repeat	Simple_repeat	1	52344	0	2
2205	chr20	31075723	31075724	chunk0111_271_1	41.26357	AR_DHT_Control;Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	31055341	31106882	-33337285	+	(GGAAT)n	Simple_repeat	Simple_repeat	1	52344	0	2
2206	chr20	31157817	31157818	chunk0111_273_1	46.6119	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr20	31157036	31159112	-33285055	+	(TGGAA)n	Simple_repeat	Simple_repeat	1	2089	0	2
2207	chr20	31185128	31185129	chunk0111_275_1	27.53075	Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	31166289	31223332	-33220835	+	(GGAAT)n	Simple_repeat	Simple_repeat	1	57839	0	2
2208	chr20	31187249	31187250	chunk0111_276_1	13.9442	SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	31166289	31223332	-33220835	+	(GGAAT)n	Simple_repeat	Simple_repeat	1	57839	0	2
2209	chr20	31622995	31622996	chunk0111_282_1	16.80421	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	31622860	31623148	-32821019	+	L1MEf	LINE	L1	123	395	-5847	2
2210	chr20	32227758	32227759	chunk0111_310_1	6.3364	AR_DHT_Control	chr20	32227723	32227810	-32216357	+	L2c	LINE	L2	3300	3387	0	2
2211	chr20	32307249	32307250	chunk0111_317_1	37.85344	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	32307048	32307278	-32136889	-	L1MC1	LINE	L1	0	6333	6099	2
2212	chr20	33165237	33165238	chunk0111_340_1	10.1358	AR_DHT_Control	chr20	33165024	33165429	-31278738	+	ORSL-2b	DNA	hAT-Tip100	62	460	-48	2
2213	chr20	33252154	33252155	chunk0111_345_1	7.36432	AR_DHT_Control	chr20	33252151	33252607	-31191560	-	MER70C	LTR	ERVL	-32	499	1	2
2214	chr20	34159415	34159416	chunk0111_391_1	28.8847	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	34158607	34159549	-30284618	+	LTR5B	LTR	ERVK	1	958	-44	2
2215	chr20	35269207	35269208	chunk0111_440_1	20.68518	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	35269150	35269228	-29174939	-	MIRb	SINE	MIR	-8	260	183	2
2216	chr20	23544997	23544998	chunk0111_92_1	7.60463	AR_DHT_Control	chr20	23544866	23545064	-40899103	+	MSTD	LTR	ERVL-MaLR	141	396	0	2
2217	chr20	38427856	38427857	chunk0112_111_1	27.8907	AR_DHT_Control	chr20	38427723	38428148	-26016019	+	MER68B	LTR	ERVL	67	493	-71	2
2218	chr20	38491787	38491788	chunk0112_126_1	32.7232	AR_DHT_Control	chr20	38491580	38491800	-25952367	+	MIRc	SINE	MIR	11	245	-23	2
2219	chr20	38980476	38980477	chunk0112_150_1	8.02791	AR_DHT_Control	chr20	38980331	38980499	-25463668	+	MIR	SINE	MIR	89	262	0	2
2220	chr20	39176885	39176886	chunk0112_156_1	6.58135	SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	39176868	39177012	-25267155	+	MER96	DNA	hAT-Tip100	1	175	0	2
2221	chr20	35991263	35991264	chunk0112_16_1	5.37222	SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	35990964	35991376	-28452791	+	MER63D	DNA	hAT-Blackjack	531	927	-3	2
2222	chr20	40004987	40004988	chunk0112_181_1	33.9788	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	40004957	40005058	-24439109	-	L1M6	LINE	L1	-4796	1700	1603	2
2223	chr20	43398172	43398173	chunk0112_274_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	43398100	43398405	-21045762	+	AluJo	SINE	Alu	1	297	-15	2
2224	chr20	43466705	43466706	chunk0112_277_1	17.14643	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	43466557	43466739	-20977428	-	L1MC5	LINE	L1	-13	9291	9059	2
2225	chr20	44701445	44701446	chunk0112_318_1	6.26854	AR_DHT_Control	chr20	44701436	44701601	-19742566	+	MIR	SINE	MIR	4	187	-75	2
2226	chr20	44708629	44708630	chunk0112_320_1	18.42512	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	44707974	44708772	-19735395	+	L1M5	LINE	L1	3554	4361	-1785	2
2227	chr20	45104760	45104761	chunk0112_341_1	13.7322	AR_DHT_Control	chr20	45104638	45104765	-19339402	+	MIRb	SINE	MIR	59	187	-81	2
2228	chr20	35742250	35742251	chunk0112_4_1	5.9324	AR_DHT_Control	chr20	35742238	35742278	-28701889	+	(ACACAC)n	Simple_repeat	Simple_repeat	1	41	0	2
2229	chr20	47181429	47181430	chunk0112_410_1	7.36432	AR_DHT_Control	chr20	47181151	47181535	-17262632	-	MLT1J2	LTR	ERVL-MaLR	0	448	55	2
2230	chr20	47599207	47599208	chunk0112_434_1	7.72091	AR_DHT_Control	chr20	47599186	47599565	-16844602	+	L1MB8	LINE	L1	5830	6178	0	2
2231	chr20	47894993	47894994	chunk0112_440_1	61.18605	Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	47894551	47896103	-16548064	-	D20S16	Satellite	Satellite	-13	1558	1	2
2232	chr20	47925327	47925328	chunk0112_444_1	15.77283	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	47925260	47925717	-16518450	+	LTR16C	LTR	ERVL	1	489	0	2
2233	chr20	48002498	48002499	chunk0112_445_1	6.13992	AR_DHT_Control	chr20	48002421	48002959	-16441208	-	LOR1a	LTR	ERV1	0	497	1	2
2234	chr20	38126139	38126140	chunk0112_99_1	5.56714	AR_DHT_Control	chr20	38126123	38126321	-26317846	-	MIRb	SINE	MIR	-34	234	39	2
2235	chr20	51122003	51122004	chunk0113_105_1	232.594	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	51121842	51122062	-13322105	-	MamRep38	DNA	hAT	-74	221	3	2
2236	chr20	52013324	52013325	chunk0113_140_1	5.24411	SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	52012898	52013376	-12430791	-	L2a	LINE	L2	-1	3425	2887	2
2237	chr20	56922047	56922048	chunk0113_280_1	6.12218	AR_DHT_Control	chr20	56921907	56922172	-7521995	+	L2c	LINE	L2	2496	2790	-629	2
2238	chr20	58140712	58140713	chunk0113_317_1	17.2904	AR_DHT_Control	chr20	58140504	58140946	-6303221	-	MLT1C	LTR	ERVL-MaLR	0	467	6	2
2239	chr20	58319200	58319201	chunk0113_321_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	58319119	58319247	-6124920	+	L1M5	LINE	L1	4917	5055	-1091	2
2240	chr20	58956446	58956447	chunk0113_353_1	4.06817	AR_DHT_Control	chr20	58956235	58956718	-5487449	-	Tigger3b	DNA	TcMar-Tigger	0	1231	704	2
2241	chr20	60216529	60216530	chunk0113_396_1	43.8462	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	60216477	60216750	-4227417	+	L1ME4b	LINE	L1	547	852	-40	2
2242	chr20	61755564	61755565	chunk0113_415_1	7.47392	SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	61755267	61755833	-2688334	+	(AC)n	Simple_repeat	Simple_repeat	2	581	0	2
2243	chr20	61859342	61859343	chunk0113_419_1	8.41723	AR_DHT_Control	chr20	61858578	61859764	-2584403	-	L1MD2	LINE	L1	-362	5997	4769	2
2244	chr20	50071733	50071734	chunk0113_48_1	4.73937	SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	50071596	50071761	-14372406	-	MIRb	SINE	MIR	0	268	77	2
2245	chr20	49330490	49330491	chunk0113_7_1	5.6503	AR_DHT_Control	chr20	49330354	49330570	-15113597	-	MIR	SINE	MIR	-10	252	26	2
2246	chr20	50528332	50528333	chunk0113_71_1	57.43177	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	50528038	50528431	-13915736	+	L2c	LINE	L2	3002	3354	-21	2
2247	chr21	9554895	9554896	chunk0114_108_1	32.0441	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	9554844	9554897	-37155086	-	MER66C	LTR	ERV1	-132	423	371	2
2248	chr21	9586679	9586680	chunk0114_112_1	5.02686	SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	9586577	9586831	-37123152	+	(TGGTGA)n	Simple_repeat	Simple_repeat	1	269	0	2
2249	chr21	9664241	9664242	chunk0114_118_1	7.30167	SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	9663369	9664618	-37045365	-	LTR12C	LTR	ERV1	0	1579	3	2
2250	chr21	9873388	9873389	chunk0114_131_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	9872732	9873528	-36836455	+	L1P4e	LINE	L1	496	1283	-5503	2
2251	chr21	10270289	10270290	chunk0114_142_1	105.6055	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr21	10269868	10270342	-36439641	+	HSATI	Satellite	Satellite	90	567	-10	2
2252	chr21	10272425	10272426	chunk0114_143_1	30.5324	Merged_Lncap_AR_Veh	chr21	10272208	10272500	-36437483	+	AluSx3	SINE	Alu	13	289	-22	2
2253	chr21	10325853	10325854	chunk0114_144_1	107.0626	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	10325835	10326402	-36383581	-	HSATI	Satellite	Satellite	-10	567	1	2
2254	chr21	10353905	10353906	chunk0114_147_1	18.603	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	10349674	10355828	-36354155	-	L1PA4	LINE	L1	-8	6147	7	2
2255	chr21	10359912	10359913	chunk0114_148_1	5.98896	AR_DHT_Control	chr21	10359037	10359925	-36350058	-	L1MA8	LINE	L1	-1	6290	5412	2
2256	chr21	10425853	10425854	chunk0114_151_1	8.68483	Merged_Lncap_AR_Veh	chr21	10425630	10426395	-36283588	-	L1MC5	LINE	L1	-177	9127	8301	2
2257	chr21	10426919	10426920	chunk0114_152_1	7.38669	SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	10426490	10427038	-36282945	+	(GTGGTG)n	Simple_repeat	Simple_repeat	1	549	0	2
2258	chr21	10748741	10748742	chunk0114_163_1	9.50117	Merged_Lncap_AR_Veh	chr21	10745670	10769750	-35940233	+	ALR/Alpha	Satellite	centr	1	24096	0	2
2259	chr21	10814396	10814397	chunk0114_164_1	6.48857	SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	10808745	10814559	-35895424	-	ALR/Alpha	Satellite	centr	-2	5830	1	2
2260	chr21	7259133	7259134	chunk0114_18_1	55.68726	SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	7258904	7260666	-39449317	+	(TGGAA)n	Simple_repeat	Simple_repeat	1	1766	0	2
2261	chr21	5222940	5222941	chunk0114_2_1	11.2177	AR_DHT_Control	chr21	5222745	5222974	-41487009	-	MIRb	SINE	MIR	-13	249	1	2
2262	chr21	7290121	7290122	chunk0114_20_1	7.75082	Merged_Lncap_AR_Veh	chr21	7286407	7301245	-39408738	+	ALR/Alpha	Satellite	centr	1	14839	-8	2
2263	chr21	7290641	7290642	chunk0114_21_1	19.54011	Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	7286407	7301245	-39408738	+	ALR/Alpha	Satellite	centr	1	14839	-8	2
2264	chr21	7917123	7917124	chunk0114_24_1	57.8143	SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	7915870	7944657	-38765326	+	(ATTCCATTCC)n	Simple_repeat	Simple_repeat	1	29177	0	2
2265	chr21	7917884	7917885	chunk0114_26_1	55.52642	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr21	7915870	7944657	-38765326	+	(ATTCCATTCC)n	Simple_repeat	Simple_repeat	1	29177	0	2
2266	chr21	16524013	16524014	chunk0114_287_1	14.12911	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	16523965	16524465	-30185518	-	MER34B	LTR	ERV1	0	565	5	2
2267	chr21	16526665	16526666	chunk0114_288_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	16526027	16527219	-30182764	-	HSMAR1	DNA	TcMar-Mariner	-1	1286	73	2
2268	chr21	5357901	5357902	chunk0114_3_1	7.56428	Merged_Lncap_AR_Veh	chr21	5354787	5367237	-41342746	+	ALR/Alpha	Satellite	centr	1	12445	-8	2
2269	chr21	8045463	8045464	chunk0114_30_1	11.8303	Merged_Lncap_AR_Veh	chr21	8000000	8049838	-38660145	-	ALR/Alpha	Satellite	centr	-19	50127	1	2
2270	chr21	17106187	17106188	chunk0114_307_1	24.682	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	17104293	17106739	-29603244	+	L1PA11	LINE	L1	1	3226	-4377	2
2271	chr21	17435893	17435894	chunk0114_321_1	28.637	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	17435617	17436064	-29273919	+	LTR54B	LTR	ERV1	2	497	-1	2
2272	chr21	8216966	8216967	chunk0114_33_1	29.8633	SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	8214772	8218941	-38491042	+	LSU-rRNA_Hsa	rRNA	rRNA	878	5034	-1	2
2273	chr21	17577936	17577937	chunk0114_334_1	8.64577	AR_DHT_Control	chr21	17577745	17578344	-29131639	-	L1MB1	LINE	L1	-109	6059	5443	2
2274	chr21	8220011	8220012	chunk0114_34_1	425.5607	Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr21	8219985	8220189	-38489794	+	(TC)n	Simple_repeat	Simple_repeat	1	206	0	2
2275	chr21	18087386	18087387	chunk0114_349_1	5.33602	SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	18086067	18087792	-28622191	-	L1M2a1	LINE	L1	-4806	2310	650	2
2276	chr21	19567171	19567172	chunk0114_359_1	61.3046	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	19566635	19567216	-27142767	+	LTR75B	LTR	ERVL	1	602	-6	2
2277	chr21	8230715	8230716	chunk0114_36_1	47.8596	SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	8229974	8230765	-38479218	+	(TCTC)n	Simple_repeat	Simple_repeat	2	795	0	2
2278	chr20	63061509	63061510	chunk0114_379_1	13.77854	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	63061118	63062203	-1381964	+	(TCCGTG)n	Simple_repeat	Simple_repeat	1	1143	0	2
2279	chr21	8239182	8239183	chunk0114_38_1	41.2423	SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh	chr21	8239092	8239215	-38470768	-	AluSx3	SINE	Alu	-9	302	180	2
2280	chr20	63210048	63210049	chunk0114_391_1	38.0893	AR_DHT_Control	chr20	63209744	63210221	-1233946	-	Tigger3b	DNA	TcMar-Tigger	-693	538	25	2
2281	chr20	63231073	63231074	chunk0114_392_1	6.84874	AR_DHT_Control	chr20	63230520	63231298	-1212869	-	LTR1A2	LTR	ERV1	0	837	54	2
2282	chr21	8402064	8402065	chunk0114_40_1	12.3113	SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	8402027	8402068	-38307915	+	(CGTC)n	Simple_repeat	Simple_repeat	1	45	0	2
2283	chr21	8420357	8420358	chunk0114_42_1	184.3887	Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	8420171	8420439	-38289544	+	(TCTC)n	Simple_repeat	Simple_repeat	1	268	0	2
2284	chr21	8441205	8441206	chunk0114_46_1	156.6967	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr21	8441145	8441992	-38267991	+	LSU-rRNA_Hsa	rRNA	rRNA	1	877	-4158	2
2285	chr21	8443321	8443322	chunk0114_48_1	75.3011	SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh	chr21	8442036	8446211	-38263772	+	LSU-rRNA_Hsa	rRNA	rRNA	878	5035	0	2
2286	chr21	8452151	8452152	chunk0114_49_1	125.7882	Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	8451874	8452163	-38257820	+	AluSz	SINE	Alu	1	289	-23	2
2287	chr21	8453995	8453996	chunk0114_50_1	224.0211	AR_DHT_Control;Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	8453825	8454095	-38255888	+	L1PREC2	LINE	L1	5900	6152	-8	2
2288	chr21	8455891	8455892	chunk0114_51_1	75.4452	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;Merged_Lncap_AR_Veh	chr21	8455260	8456884	-38253099	+	(TCTC)n	Simple_repeat	Simple_repeat	1	1629	0	2
2289	chr21	8464800	8464801	chunk0114_52_1	31.3175	SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr21	8464120	8465014	-38244969	+	(CTCT)n	Simple_repeat	Simple_repeat	1	897	0	2
2290	chr21	8465391	8465392	chunk0114_53_1	174.6078	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh;AR_DHT_Control	chr21	8465064	8465409	-38244574	+	(CTCT)n	Simple_repeat	Simple_repeat	2	347	0	2
2291	chr21	8883651	8883652	chunk0114_59_1	9.25365	Merged_Lncap_AR_Veh	chr21	8883272	8883775	-37826208	-	L1MB8	LINE	L1	-6	6172	5653	2
2292	chr21	9008859	9008860	chunk0114_62_1	6.03438	AR_DHT_Control	chr21	9008501	9009363	-37700620	+	MSTA-int	LTR	ERVL-MaLR	725	1735	0	2
2293	chr21	9042945	9042946	chunk0114_64_1	6.37162	SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	9037679	9043099	-37666884	-	GSATII	Satellite	centr	-32	5569	1	2
2294	chr21	9133856	9133857	chunk0114_74_1	7.87427	SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	9133555	9134731	-37575252	+	L1MA3	LINE	L1	3777	4937	-1209	2
2295	chr21	9154605	9154606	chunk0114_75_1	9.57048	SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	9154294	9155978	-37554005	-	HERVK14-int	LTR	ERVK	-4207	1889	204	2
2296	chr21	9258098	9258099	chunk0114_86_1	22.51867	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr21	9258039	9258180	-37451803	+	MER21C	LTR	ERVL	99	234	-634	2
2297	chr21	9309871	9309872	chunk0114_90_1	6.0927	SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	9309716	9310013	-37399970	-	AluSx	SINE	Alu	-12	300	2	2
2298	chr21	23194153	23194154	chunk0115_124_1	17.10455	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	23193790	23194316	-23515667	+	HAL1ME	LINE	L1	863	1474	-991	2
2299	chr21	25296515	25296516	chunk0115_169_1	5.69226	SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	25296217	25296690	-21413293	+	MER70A	LTR	ERVL	1	472	0	2
2300	chr21	25406832	25406833	chunk0115_171_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	25406523	25407541	-21302442	-	L1M1	LINE	L1	-6018	1547	439	2
2301	chr21	26399459	26399460	chunk0115_202_1	7.43227	SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	26399163	26399518	-20310465	-	LTR16A1	LTR	ERVL	-85	371	3	2
2302	chr21	27272683	27272684	chunk0115_230_1	7.3092	AR_DHT_Control	chr21	27272660	27272774	-19437209	-	MamRep605	LTR?	LTR?	-244	605	482	2
2303	chr21	27872564	27872565	chunk0115_266_1	7.36432	AR_DHT_Control	chr21	27872237	27873723	-18836260	-	L1PA15-16	LINE	L1	-5596	1257	1	2
2304	chr21	28246086	28246087	chunk0115_290_1	17.3079	AR_DHT_Control	chr21	28245715	28246388	-18463595	+	L1MA3	LINE	L1	5629	6305	0	2
2305	chr21	28378143	28378144	chunk0115_298_1	14.23545	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	28378142	28378186	-18331797	-	MIR	SINE	MIR	-97	165	122	2
2306	chr21	28874376	28874377	chunk0115_327_1	6.71486	SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	28873020	28876120	-17833863	-	ERVL-B4-int	LTR	ERVL	-7	5707	2520	2
2307	chr21	29032022	29032023	chunk0115_334_1	5.56779	AR_DHT_Control	chr21	29031759	29032229	-17677754	-	L1MD2	LINE	L1	-2	6357	5885	2
2308	chr21	31410676	31410677	chunk0115_421_1	7.22694	SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	31410671	31410797	-15299186	+	GA-rich	Low_complexity	Low_complexity	1	128	0	2
2309	chr21	31621569	31621570	chunk0115_423_1	14.7503	AR_DHT_Control	chr21	31621413	31621694	-15088289	-	L1MC4a	LINE	L1	-320	5922	5649	2
2310	chr21	31781975	31781976	chunk0115_428_1	19.662	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	31781527	31782366	-14927617	+	L2b	LINE	L2	2334	3248	-139	2
2311	chr21	21412241	21412242	chunk0115_59_1	10.1791	AR_DHT_Control	chr21	21412050	21412429	-25297554	-	MLT1B	LTR	ERVL-MaLR	-5	462	4	2
2312	chr21	35790270	35790271	chunk0116_115_1	12.1886	AR_DHT_Control	chr21	35790171	35790323	-10919660	-	MER58A	DNA	hAT-Charlie	-79	145	2	2
2313	chr21	36332524	36332525	chunk0116_142_1	4.83532	AR_DHT_Control	chr21	36332445	36332776	-10377207	-	MER57C2	LTR	ERV1	-74	360	1	2
2314	chr21	36858636	36858637	chunk0116_182_1	6.77976	AR_DHT_Control	chr21	36858500	36858835	-9851148	-	L2a	LINE	L2	0	3426	3031	2
2315	chr21	37443801	37443802	chunk0116_204_1	5.48709	SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	37443703	37443993	-9265990	-	MLT1C	LTR	ERVL-MaLR	-170	297	2	2
2316	chr21	38121329	38121330	chunk0116_224_1	7.58612	SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	38121186	38121599	-8588384	-	LTR9	LTR	ERV1	0	612	187	2
2317	chr21	38805820	38805821	chunk0116_252_1	6.03438	AR_DHT_Control	chr21	38805636	38805854	-7904129	+	(CCCCT)n	Simple_repeat	Simple_repeat	1	223	0	2
2318	chr21	33273178	33273179	chunk0116_28_1	7.67158	AR_DHT_Control	chr21	33273017	33273238	-13436745	-	Tigger3c	DNA	TcMar-Tigger	0	602	367	2
2319	chr21	40521793	40521794	chunk0116_302_1	17.0249	AR_DHT_Control	chr21	40521631	40521997	-6187986	+	L1MA6	LINE	L1	5901	6293	-7	2
2320	chr21	40643629	40643630	chunk0116_312_1	27.07507	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	40643591	40643954	-6066029	+	MLT1B	LTR	ERVL-MaLR	1	390	0	2
2321	chr21	41965151	41965152	chunk0116_370_1	5.80103	AR_DHT_Control	chr21	41965136	41965294	-4744689	-	L2a	LINE	L2	-1	3425	3258	2
2322	chr21	33429730	33429731	chunk0116_38_1	12.3053	AR_DHT_Control	chr21	33429465	33429856	-13280127	-	MER68	LTR	ERVL	-85	478	95	2
2323	chr21	42177530	42177531	chunk0116_380_1	6.18182	SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	42177503	42177805	-4532178	-	L1ME3Cz	LINE	L1	-637	360	60	2
2324	chr21	42183997	42183998	chunk0116_381_1	5.28628	AR_DHT_Control	chr21	42183383	42184363	-4525620	+	(TG)n	Simple_repeat	Simple_repeat	1	1054	0	2
2325	chr21	42550719	42550720	chunk0116_409_1	5.38748	SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	42550138	42551317	-4158666	+	L1MB8	LINE	L1	3159	4399	-1747	2
2326	chr21	42716244	42716245	chunk0116_418_1	103.5432	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	42715794	42716568	-3993415	-	L1MC2	LINE	L1	-214	6130	5316	2
2327	chr21	43860045	43860046	chunk0116_455_1	16.78065	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	43859630	43860176	-2849807	-	MER41A	LTR	ERV1	0	554	1	2
2328	chr21	34151648	34151649	chunk0116_66_1	8.22827	AR_DHT_Control	chr21	34151348	34151981	-12558002	-	L1ME3Cz	LINE	L1	-229	768	77	2
2329	chr22	11056867	11056868	chunk0117_10_1	10.4785	Merged_Lncap_AR_Veh	chr22	11056703	11057032	-39761436	-	AluSg	SINE	Alu	0	310	2	2
2330	chr22	11066593	11066594	chunk0117_11_1	19.52714	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr22	11064567	11067436	-39751032	+	REP522	Satellite	telo	1	2719	-1252	2
2331	chr22	18892493	18892494	chunk0117_121_1	42.0752	SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh	chr22	18892362	18892653	-31925815	-	AluSc8	SINE	Alu	-23	288	13	2
2332	chr22	11211280	11211281	chunk0117_13_1	70.7345	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh	chr22	11211025	11211797	-39606671	-	SAR	Satellite	Satellite	-21	771	1	2
2333	chr22	19441066	19441067	chunk0117_139_1	6.48643	AR_DHT_Control	chr22	19440891	19441380	-31377088	-	L1MD2	LINE	L1	-10	6349	5825	2
2334	chr22	19535191	19535192	chunk0117_141_1	12.1886	AR_DHT_Control	chr22	19535016	19535467	-31283001	+	L1MA5A	LINE	L1	5472	5899	-398	2
2335	chr22	20701165	20701166	chunk0117_174_1	9.21264	AR_DHT_Control	chr22	20701094	20701324	-30117144	-	L1MC	LINE	L1	-2197	3949	3703	2
2336	chr22	21629317	21629318	chunk0117_194_1	6.3145	SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	21629313	21629345	-29189123	+	(GCACGT)n	Simple_repeat	Simple_repeat	1	32	0	2
2337	chr22	21867683	21867684	chunk0117_208_1	9.22937	SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	21867647	21867707	-28950761	+	G-rich	Low_complexity	Low_complexity	1	61	0	2
2338	chr22	11312938	11312939	chunk0117_21_1	5.03748	SRA057177_Lncap_AR_DHT_10nm_4hr	chr22	11312594	11313749	-39504719	+	L1PA12	LINE	L1	7	2286	-5333	2
2339	chr22	22095607	22095608	chunk0117_214_1	58.3554	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	22095156	22096680	-28721788	+	L1PA16	LINE	L1	4614	6157	-9	2
2340	chr22	11356357	11356358	chunk0117_23_1	20.31957	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	11356357	11356404	-39462064	+	(GT)n	Simple_repeat	Simple_repeat	1	47	0	2
2341	chr22	11819033	11819034	chunk0117_26_1	14.2911	AR_DHT_Control	chr22	11818874	11819136	-38999332	+	ACRO1	Satellite	acro	1	262	0	2
2342	chr22	11900769	11900770	chunk0117_28_1	43.537	SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh;AR_DHT_Control	chr22	11900616	11900862	-38917606	-	AluJr	SINE	Alu	-48	264	13	2
2343	chr22	11901229	11901230	chunk0117_29_1	25.796	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	11900875	11902001	-38916467	-	L1MA5	LINE	L1	-354	5946	4805	2
2344	chr22	24630539	24630540	chunk0117_312_1	10.1791	AR_DHT_Control	chr22	24630445	24631411	-26187057	-	LTR5_Hs	LTR	ERVK	0	968	1	2
2345	chr22	24802321	24802322	chunk0117_314_1	7.53305	AR_DHT_Control	chr22	24801862	24802391	-26016077	-	MLT2B4	LTR	ERVL	0	520	1	2
2346	chr21	43959162	43959163	chunk0117_338_1	4.85178	AR_DHT_Control	chr21	43958233	43959528	-2750455	+	(GT)n	Simple_repeat	Simple_repeat	1	1400	0	2
2347	chr21	44012404	44012405	chunk0117_345_1	3.65712	SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	44012379	44012478	-2697505	+	(GCCGG)n	Simple_repeat	Simple_repeat	1	100	0	2
2348	chr21	45009888	45009889	chunk0117_367_1	12.8015	AR_DHT_Control	chr21	45008960	45010899	-1699084	-	L1ME1	LINE	L1	-664	5688	3652	2
2349	chr21	45191609	45191610	chunk0117_382_1	5.43798	SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	45191181	45191795	-1518188	-	L1M5	LINE	L1	-1868	4278	3596	2
2350	chr21	45797522	45797523	chunk0117_412_1	13.7182	SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	45797154	45799130	-910853	+	(TGGA)n	Simple_repeat	Simple_repeat	1	1988	0	2
2351	chr21	45847082	45847083	chunk0117_415_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	45846648	45848053	-861930	-	L1MC4	LINE	L1	-3660	2555	1132	2
2352	chr21	46406726	46406727	chunk0117_440_1	6.67115	SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	46406291	46407334	-302649	-	L1M5	LINE	L1	-1643	4503	3352	2
2353	chr22	12389034	12389035	chunk0117_45_1	5.69226	SRA057177_Lncap_AR_DHT_10nm_4hr	chr22	12388849	12394988	-38423480	+	L1PA3	LINE	L1	174	6325	-3	2
2354	chr22	12691833	12691834	chunk0117_50_1	24.0299	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr22	12691730	12692720	-38125748	-	BSR/Beta	Satellite	Satellite	-64	987	1	2
2355	chr22	17318621	17318622	chunk0117_90_1	6.93299	AR_DHT_Control	chr22	17318593	17318711	-33499757	-	L2c	LINE	L2	-1	3386	3279	2
2356	chr22	17601315	17601316	chunk0117_98_1	8.27376	AR_DHT_Control	chr22	17601295	17601421	-33217047	-	L2c	LINE	L2	-5	3382	3258	2
2357	chr22	29941514	29941515	chunk0118_145_1	46.4842	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	29940989	29941657	-20876811	-	L1ME2	LINE	L1	-81	6083	5403	2
2358	chr22	29961754	29961755	chunk0118_147_1	4.29711	AR_DHT_Control	chr22	29961510	29962105	-20856363	+	Tigger3c	DNA	TcMar-Tigger	1	602	0	2
2359	chr22	32112648	32112649	chunk0118_220_1	43.07569	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	32112635	32113008	-18705460	+	L1MA8	LINE	L1	5893	6288	-3	2
2360	chr22	26445569	26445570	chunk0118_25_1	7.16019	AR_DHT_Control	chr22	26445506	26445655	-24372813	+	MIRb	SINE	MIR	1	143	-125	2
2361	chr22	33094716	33094717	chunk0118_259_1	23.24699	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	33094706	33095018	-17723450	-	AluSp	SINE	Alu	-1	312	1	2
2362	chr22	33886847	33886848	chunk0118_288_1	149.1897	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr22	33886767	33887121	-16931347	-	L2b	LINE	L2	-2	3373	3043	2
2363	chr22	34236782	34236783	chunk0118_293_1	5.77762	AR_DHT_Control	chr22	34236779	34236849	-16581619	-	MLT1H2	LTR	ERVL-MaLR	-258	291	217	2
2364	chr22	35034037	35034038	chunk0118_304_1	6.23615	AR_DHT_Control	chr22	35033944	35034101	-15784367	+	MIR	SINE	MIR	67	228	-34	2
2365	chr22	36622069	36622070	chunk0118_379_1	13.45379	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	36621972	36622186	-14196282	-	MIR	SINE	MIR	-11	251	36	2
2366	chr22	37019628	37019629	chunk0118_385_1	6.14829	SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	37019626	37019672	-13798796	+	G-rich	Low_complexity	Low_complexity	1	46	0	2
2367	chr22	37321475	37321476	chunk0118_389_1	7.57442	AR_DHT_Control	chr22	37321405	37321749	-13496719	+	L1PA15	LINE	L1	5814	6161	-4	2
2368	chr22	37529755	37529756	chunk0118_390_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr22	37529627	37529785	-13288683	-	MIR	SINE	MIR	-114	148	2	2
2369	chr22	37777391	37777392	chunk0118_393_1	28.638	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	37777362	37777538	-13040930	+	MIRb	SINE	MIR	16	193	-75	2
2370	chr22	27965569	27965570	chunk0118_59_1	4.67225	AR_DHT_Control	chr22	27965534	27965830	-22852638	-	L1ME3C	LINE	L1	-230	5893	5545	2
2371	chr22	42261235	42261236	chunk0119_111_1	21.55147	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	42260955	42261464	-8557004	-	L1ME2	LINE	L1	-100	6064	5515	2
2372	chr22	42682301	42682302	chunk0119_121_1	10.7282	AR_DHT_Control	chr22	42682223	42682407	-8136061	+	ERVL-E-int	LTR	ERVL	5420	5600	-67	2
2373	chr22	43151006	43151007	chunk0119_158_1	10.3813	AR_DHT_Control	chr22	43150930	43151073	-7667395	-	MIRb	SINE	MIR	-27	241	93	2
2374	chr22	43446281	43446282	chunk0119_175_1	20.70592	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	43446262	43446396	-7372072	-	L2a	LINE	L2	-13	3413	3242	2
2375	chr22	43988069	43988070	chunk0119_182_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	43987994	43988128	-6830340	+	L1ME4a	LINE	L1	5975	6122	-2	2
2376	chr22	46335435	46335436	chunk0119_296_1	5.0545	SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	46335152	46335459	-4483009	-	MER4B	LTR	ERV1	-263	347	2	2
2377	chr22	46842671	46842672	chunk0119_327_1	4.19326	AR_DHT_Control	chr22	46842336	46842727	-3975741	-	L1ME2z	LINE	L1	0	6444	6015	2
2378	chr22	46987399	46987400	chunk0119_337_1	24.6402	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	46987326	46987464	-3831004	-	L1ME2z	LINE	L1	-1841	4696	4553	2
2379	chr22	47333770	47333771	chunk0119_353_1	5.53391	AR_DHT_Control	chr22	47333586	47334101	-3484367	-	MLT1H	LTR	ERVL-MaLR	0	549	1	2
2380	chr22	48138574	48138575	chunk0119_380_1	8.24431	SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	48138340	48138945	-2679523	+	L1ME4b	LINE	L1	75	655	-237	2
2381	chr22	49901731	49901732	chunk0119_420_1	6.71885	SRA057177_Lncap_AR_DHT_10nm_4hr	chr22	49901448	49902261	-916207	+	(GT)n	Simple_repeat	Simple_repeat	1	832	0	2
2382	chr22	50131399	50131400	chunk0119_439_1	24.2778	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	50131207	50131835	-686633	-	L1M5	LINE	L1	-781	5398	4762	2
2383	chr22	50387594	50387595	chunk0119_451_1	6.17841	AR_DHT_Control	chr22	50387583	50387737	-430731	-	MER63B	DNA	hAT-Blackjack	0	436	280	2
2384	chr22	40758599	40758600	chunk0119_54_1	19.70339	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	40758479	40758712	-10059756	+	MIRc	SINE	MIR	3	248	-20	2
2385	chr22	40966124	40966125	chunk0119_62_1	14.33632	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	40965971	40966218	-9852250	+	MIRc	SINE	MIR	1	244	-24	2
2386	chr22	41106655	41106656	chunk0119_67_1	7.36432	AR_DHT_Control	chr22	41106628	41106882	-9711586	-	AluJr	SINE	Alu	-13	299	11	2
2387	chr3	990764	990765	chunk0120_10_1	10.1214	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	990541	991056	-197304503	+	(ATGG)n	Simple_repeat	Simple_repeat	1	515	0	2
2388	chr3	4935748	4935749	chunk0120_131_1	5.14476	AR_DHT_Control	chr3	4935325	4935890	-193359669	+	L2a	LINE	L2	2817	3424	-2	2
2389	chr3	5344344	5344345	chunk0120_151_1	6.64592	AR_DHT_Control	chr3	5344224	5344628	-192950931	-	L1ME3B	LINE	L1	-1	6172	5685	2
2390	chr3	357039	357040	chunk0120_2_1	7.53305	AR_DHT_Control	chr3	356392	357085	-197938474	-	L2a	LINE	L2	0	3426	2603	2
2391	chr3	8803858	8803859	chunk0120_249_1	7.91873	AR_DHT_Control	chr3	8803390	8805013	-189490546	+	L1MC1	LINE	L1	4697	6333	0	2
2392	chr3	8932685	8932686	chunk0120_253_1	17.2447	AR_DHT_Control	chr3	8930941	8932815	-189362744	+	L1ME1	LINE	L1	4241	5992	-360	2
2393	chr3	9351776	9351777	chunk0120_272_1	4.67092	AR_DHT_Control	chr3	9351576	9351795	-188943764	+	Tigger3a	DNA	TcMar-Tigger	1	230	-118	2
2394	chr3	9649114	9649115	chunk0120_282_1	7.22694	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	9648895	9649190	-188646369	-	AluSz	SINE	Alu	-15	297	2	2
2395	chr3	10283793	10283794	chunk0120_316_1	5.66854	AR_DHT_Control	chr3	10283788	10283991	-188011568	-	MIRb	SINE	MIR	-19	249	7	2
2396	chr3	10795999	10796000	chunk0120_332_1	99.5738	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	10795803	10797072	-187498487	+	L1MA9	LINE	L1	4861	6150	-162	2
2397	chr3	10902907	10902908	chunk0120_336_1	20.15729	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	10902878	10903038	-187392521	+	MIR	SINE	MIR	92	256	-6	2
2398	chr3	11431435	11431436	chunk0120_346_1	13.7713	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	11431417	11431701	-186863858	-	L1MB7	LINE	L1	-49	6135	5838	2
2399	chr3	12487053	12487054	chunk0120_396_1	15.7936	AR_DHT_Control	chr3	12486536	12487115	-185808444	-	L1MB7	LINE	L1	0	6184	5577	2
2400	chr3	12631728	12631729	chunk0120_404_1	13.7752	AR_DHT_Control	chr3	12631678	12631824	-185663735	+	MER91A	DNA	hAT-Tip100	14	164	-32	2
2401	chr3	13374131	13374132	chunk0120_430_1	5.77611	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	13373965	13374404	-184921155	+	(ACTCAC)n	Simple_repeat	Simple_repeat	1	456	0	2
2402	chr3	14229199	14229200	chunk0120_446_1	189.6384	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	14228817	14229798	-184065761	+	HERVK3-int	LTR	ERVK	6223	7202	0	2
2403	chr3	900652	900653	chunk0120_8_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	900183	900825	-197394734	+	L1MA6	LINE	L1	399	1422	-6144	2
2404	chr3	19039748	19039749	chunk0121_148_1	6.93299	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	19037716	19040354	-179255205	-	L1P3	LINE	L1	-534	5620	2946	2
2405	chr3	19050582	19050583	chunk0121_149_1	4.36845	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	19050251	19051113	-179244446	-	MER57A-int	LTR	ERV1	-2846	2025	882	2
2406	chr3	21109804	21109805	chunk0121_202_1	13.71174	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	21109678	21109874	-177185685	-	MIRb	SINE	MIR	-36	232	36	2
2407	chr3	21531534	21531535	chunk0121_207_1	41.7997	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	21531182	21532064	-176763495	+	L1MC1	LINE	L1	5417	6323	-10	2
2408	chr3	21730969	21730970	chunk0121_215_1	54.2724	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	21730788	21731276	-176564283	-	L1MC4a	LINE	L1	-1987	5895	5399	2
2409	chr3	22727560	22727561	chunk0121_244_1	5.95444	AR_DHT_Control	chr3	22727404	22727753	-175567806	+	L2c	LINE	L2	3019	3378	-9	2
2410	chr3	23020282	23020283	chunk0121_253_1	6.48643	AR_DHT_Control	chr3	23019619	23021447	-175274112	+	L1PB1	LINE	L1	4	1960	-4903	2
2411	chr3	23316950	23316951	chunk0121_270_1	6.94497	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	23314429	23317469	-174978090	-	L1M1	LINE	L1	-4387	3178	231	2
2412	chr3	23331473	23331474	chunk0121_274_1	13.36448	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	23331260	23331879	-174963680	-	L2a	LINE	L2	-6	3420	2782	2
2413	chr3	23528303	23528304	chunk0121_280_1	45.1654	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	23528300	23528671	-174766888	-	LTR60B	LTR	ERV1	-24	741	372	2
2414	chr3	24018939	24018940	chunk0121_302_1	4.53037	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	24018754	24020004	-174275555	-	LTR2752	LTR	ERV1	0	1263	1	2
2415	chr3	24470449	24470450	chunk0121_335_1	5.40567	AR_DHT_Control	chr3	24470330	24470561	-173824998	+	MIR	SINE	MIR	3	256	-6	2
2416	chr3	24592925	24592926	chunk0121_343_1	30.60364	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	24592855	24593268	-173702291	+	Tigger15a	DNA	TcMar-Tigger	28	482	-233	2
2417	chr3	24658265	24658266	chunk0121_349_1	25.76127	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	24657375	24658730	-173636829	-	L1MA5A	LINE	L1	-53	6946	5586	2
2418	chr3	25079871	25079872	chunk0121_377_1	5.46037	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	25078829	25079953	-173215606	-	L1ME2	LINE	L1	-1436	4883	3735	2
2419	chr3	25080140	25080141	chunk0121_378_1	7.48058	AR_DHT_Control	chr3	25079954	25080948	-173214611	-	L1MB4	LINE	L1	-29	6151	5082	2
2420	chr3	25286911	25286912	chunk0121_393_1	32.2672	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	25286870	25286948	-173008611	-	MER113	DNA	hAT-Charlie	-94	427	351	2
2421	chr3	25397333	25397334	chunk0121_396_1	15.3887	AR_DHT_Control	chr3	25390904	25397567	-172897992	-	L1PB1	LINE	L1	-2	6865	3	2
2422	chr3	25595761	25595762	chunk0121_404_1	24.8881	AR_DHT_Control	chr3	25595596	25595767	-172699792	+	MER3	DNA	hAT-Charlie	2	187	-22	2
2423	chr3	25998755	25998756	chunk0121_434_1	21.0751	AR_DHT_Control	chr3	25997204	25999542	-172296017	-	L1PA6	LINE	L1	-3783	2363	1	2
2424	chr3	26375135	26375136	chunk0121_443_1	5.00965	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	26374293	26375365	-171920194	+	L1PREC2	LINE	L1	3489	4568	-1578	2
2425	chr3	26959156	26959157	chunk0121_454_1	34.8617	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	26953636	26959822	-171335737	-	L1PA6	LINE	L1	-1	6153	5	2
2426	chr3	16178256	16178257	chunk0121_85_1	5.14593	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	16177926	16178306	-182117253	+	(TG)n	Simple_repeat	Simple_repeat	1	396	0	2
2427	chr3	16329281	16329282	chunk0121_86_1	5.20246	AR_DHT_Control	chr3	16328970	16329329	-181966230	+	MSTD	LTR	ERVL-MaLR	1	396	0	2
2428	chr3	16576689	16576690	chunk0121_92_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	16576054	16577891	-181717668	+	L1MA4	LINE	L1	411	2319	-5247	2
2429	chr3	32623814	32623815	chunk0122_179_1	13.2288	AR_DHT_Control	chr3	32623617	32624249	-165671310	-	L1MB5	LINE	L1	-216	5958	5354	2
2430	chr3	32794413	32794414	chunk0122_194_1	6.04605	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	32794303	32794698	-165500861	-	L2c	LINE	L2	-6	3381	2929	2
2431	chr3	33318392	33318393	chunk0122_214_1	19.67752	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	33317935	33318672	-164976887	-	MLT1J2-int	LTR	ERVL-MaLR	-553	834	1	2
2432	chr3	33679651	33679652	chunk0122_228_1	20.54936	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	33678695	33680527	-164615032	+	L1MC1	LINE	L1	4591	6500	-8	2
2433	chr3	34007875	34007876	chunk0122_242_1	15.4161	AR_DHT_Control	chr3	34007709	34007935	-164287624	+	L2b	LINE	L2	3127	3373	-2	2
2434	chr3	34890513	34890514	chunk0122_255_1	75.2257	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	34890358	34890698	-163404861	-	MER58B	DNA	hAT-Charlie	0	341	45	2
2435	chr3	36058869	36058870	chunk0122_284_1	22.04084	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	36058473	36059767	-162235792	+	L1MC3	LINE	L1	5477	6824	-961	2
2436	chr3	36172875	36172876	chunk0122_291_1	32.7123	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	36172586	36173324	-162122235	-	ERV3-16A3_I-int	LTR	ERVL	0	5226	4472	2
2437	chr3	37339443	37339444	chunk0122_349_1	50.911	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	37339161	37339945	-160955614	-	L1MB5	LINE	L1	-280	5894	5086	2
2438	chr3	37832982	37832983	chunk0122_385_1	5.03761	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	37832726	37833148	-160462411	-	LTR16E2	LTR	ERVL	-6	562	165	2
2439	chr3	38135455	38135456	chunk0122_405_1	16.5871	AR_DHT_Control	chr3	38135236	38136292	-160159267	-	LTR5B	LTR	ERVK	0	1002	1	2
2440	chr3	39298149	39298150	chunk0122_440_1	6.80366	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	39298069	39299495	-158996064	+	L1M2	LINE	L1	545	2003	-4846	2
2441	chr3	28544493	28544494	chunk0122_49_1	20.07141	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	28543744	28545324	-169750235	+	ERVL-B4-int	LTR	ERVL	3557	5240	-474	2
2442	chr3	28553582	28553583	chunk0122_50_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	28553265	28553610	-169741949	-	MLT1I	LTR	ERVL-MaLR	-58	353	8	2
2443	chr3	27346750	27346751	chunk0122_8_1	7.48106	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	27346705	27346779	-170948780	-	L2c	LINE	L2	0	3387	3315	2
2444	chr3	29912969	29912970	chunk0122_80_1	189.8578	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	29912822	29913397	-168382162	-	L4_C_Mam	LINE	RTE-X	-800	4338	3728	2
2445	chr3	42328697	42328698	chunk0123_113_1	21.19091	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	42328434	42328888	-155966671	-	MLT1C	LTR	ERVL-MaLR	-18	449	1	2
2446	chr3	40263765	40263766	chunk0123_13_1	56.6129	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	40263669	40263767	-158031792	+	MER34B-int	LTR	ERV1	208	304	-5052	2
2447	chr3	42602317	42602318	chunk0123_132_1	46.66765	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr3	42602117	42602433	-155693126	+	Tigger3a	DNA	TcMar-Tigger	1	348	0	2
2448	chr3	42776025	42776026	chunk0123_134_1	13.71735	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	42775656	42776837	-155518722	-	L1MD2	LINE	L1	-293	6066	4852	2
2449	chr3	40264619	40264620	chunk0123_14_1	17.55394	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	40264427	40265037	-158030522	+	MER101-int	LTR	ERV1	1427	2420	-2460	2
2450	chr3	42805342	42805343	chunk0123_140_1	4.79975	AR_DHT_Control	chr3	42804873	42805377	-155490182	-	PABL_B	LTR	ERV1	0	667	1	2
2451	chr3	45847576	45847577	chunk0123_255_1	5.10203	AR_DHT_Control	chr3	45846420	45848998	-152446561	-	Tigger2	DNA	TcMar-Tigger	0	2718	1	2
2452	chr3	46004297	46004298	chunk0123_263_1	79.9437	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	46003513	46004352	-152291207	+	MER50-int	LTR	ERV1	3147	3980	-2559	2
2453	chr3	46108547	46108548	chunk0123_269_1	29.1195	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	46108303	46108931	-152186628	+	MER67C	LTR	ERV1	1	711	0	2
2454	chr3	46196446	46196447	chunk0123_273_1	19.84535	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	46196345	46197562	-152097997	+	Tigger3b	DNA	TcMar-Tigger	1	1231	0	2
2455	chr3	46666720	46666721	chunk0123_297_1	112.4146	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	46666638	46666733	-151628826	-	MIRc	SINE	MIR	-126	142	46	2
2456	chr3	47737343	47737344	chunk0123_337_1	5.70279	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	47737110	47737425	-150558134	+	AluJr	SINE	Alu	1	309	-3	2
2457	chr3	48301013	48301014	chunk0123_365_1	4.12036	AR_DHT_Control	chr3	48300765	48301061	-149994498	+	AluSc	SINE	Alu	1	294	-15	2
2458	chr3	40773610	40773611	chunk0123_37_1	5.43798	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	40773610	40773843	-157521716	-	L1MB8	LINE	L1	-1	6177	5944	2
2459	chr3	40087668	40087669	chunk0123_4_1	6.73404	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	40087573	40087778	-158207781	-	MER63A	DNA	hAT-Blackjack	0	210	1	2
2460	chr3	49183860	49183861	chunk0123_410_1	20.547	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	49183678	49184011	-149111548	+	L1MD1	LINE	L1	5598	5932	-427	2
2461	chr3	49769886	49769887	chunk0123_423_1	26.68642	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	49769562	49769932	-148525627	+	MLT1F1	LTR	ERVL-MaLR	3	434	-114	2
2462	chr3	51284753	51284754	chunk0123_455_1	5.69226	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	51283298	51285647	-147009912	+	L1M3de	LINE	L1	2	1959	-4694	2
2463	chr3	41188534	41188535	chunk0123_57_1	5.77762	AR_DHT_Control	chr3	41188451	41188924	-157106635	+	L1MC4a	LINE	L1	5486	5943	-1939	2
2464	chr3	41217271	41217272	chunk0123_61_1	12.476	AR_DHT_Control	chr3	41216884	41217296	-157078263	+	L2a	LINE	L2	2695	3194	-232	2
2465	chr3	54341911	54341912	chunk0124_128_1	51.6112	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	54341899	54342110	-143953449	-	MIR	SINE	MIR	0	262	49	2
2466	chr3	54717644	54717645	chunk0124_145_1	8.82835	AR_DHT_Control	chr3	54717504	54717898	-143577661	+	(TG)n	Simple_repeat	Simple_repeat	1	412	0	2
2467	chr3	55436717	55436718	chunk0124_181_1	84.4698	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	55436581	55436729	-142858830	-	L1ME4a	LINE	L1	-744	5498	5329	2
2468	chr3	55790976	55790977	chunk0124_204_1	20.58471	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	55790873	55791026	-142504533	+	MIRb	SINE	MIR	3	152	-116	2
2469	chr3	51926945	51926946	chunk0124_21_1	20.61647	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	51926926	51927305	-146368254	+	L1ME2	LINE	L1	5297	5693	-471	2
2470	chr3	57015077	57015078	chunk0124_260_1	7.7606	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	57015068	57015205	-141280354	+	MER58A	DNA	hAT-Charlie	1	144	-80	2
2471	chr3	57555622	57555623	chunk0124_280_1	5.25527	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	57555574	57555742	-140739817	+	MIRb	SINE	MIR	58	255	-13	2
2472	chr3	58387804	58387805	chunk0124_345_1	6.84874	AR_DHT_Control	chr3	58387758	58387821	-139907738	+	GA-rich	Low_complexity	Low_complexity	1	64	0	2
2473	chr3	59574161	59574162	chunk0124_381_1	17.6437	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	59573771	59574309	-138721250	-	MER44B	DNA	TcMar-Tigger	0	550	1	2
2474	chr3	61288083	61288084	chunk0124_437_1	5.73594	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	61287875	61288362	-137007197	+	MLT1H1	LTR	ERVL-MaLR	12	547	-8	2
2475	chr3	61348988	61348989	chunk0124_439_1	27.27007	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	61348606	61349085	-136946474	-	LTR33	LTR	ERVL	-4	511	1	2
2476	chr3	61462511	61462512	chunk0124_444_1	6.06878	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	61462501	61462564	-136832995	+	MIR	SINE	MIR	88	150	-112	2
2477	chr3	52872270	52872271	chunk0124_62_1	40.57934	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	52871968	52872329	-145423230	+	L2a	LINE	L2	3028	3426	0	2
2478	chr3	53537995	53537996	chunk0124_96_1	26.09076	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	53537255	53538132	-144757427	-	L1MC5	LINE	L1	-5	9299	8476	2
2479	chr3	66133243	66133244	chunk0125_143_1	10.1791	AR_DHT_Control	chr3	66133142	66133602	-132161957	+	Tigger3c	DNA	TcMar-Tigger	142	602	0	2
2480	chr3	67516729	67516730	chunk0125_211_1	19.99954	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	67516609	67516809	-130778750	-	L2a	LINE	L2	-2	3424	3198	2
2481	chr3	69930427	69930428	chunk0125_291_1	5.25527	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	69930410	69930583	-128364976	+	L2a	LINE	L2	2992	3182	-244	2
2482	chr3	70746098	70746099	chunk0125_310_1	17.11259	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	70746068	70746353	-127549206	+	L1ME4b	LINE	L1	259	519	-373	2
2483	chr3	70797160	70797161	chunk0125_313_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	70797023	70797658	-127497901	-	L1MDa	LINE	L1	-5625	1008	122	2
2484	chr3	71601709	71601710	chunk0125_380_1	7.69414	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	71601443	71601873	-126693686	-	LTR16B2	LTR	ERVL	0	462	2	2
2485	chr3	75043331	75043332	chunk0126_104_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	75039552	75043512	-123252047	-	L1PA8A	LINE	L1	-1813	5102	1134	2
2486	chr3	75772548	75772549	chunk0126_124_1	5.52722	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	75771602	75772849	-122522710	+	MER52A	LTR	ERV1	1	1755	0	2
2487	chr3	76550896	76550897	chunk0126_146_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	76550423	76552080	-121743479	+	MER52A	LTR	ERV1	1	1755	0	2
2488	chr3	76781354	76781355	chunk0126_152_1	8.24382	AR_DHT_Control	chr3	76779174	76782122	-121513437	-	L1MA10	LINE	L1	-16	6904	3971	2
2489	chr3	77917605	77917606	chunk0126_169_1	17.64152	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	77917207	77917803	-120377756	+	LTR24C	LTR	ERV1	3	635	0	2
2490	chr3	78087480	78087481	chunk0126_177_1	37.81002	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	78087451	78087534	-120208025	+	Tigger7	DNA	TcMar-Tigger	2405	2486	-5	2
2491	chr3	79437723	79437724	chunk0126_254_1	24.5896	AR_DHT_Control	chr3	79437388	79437906	-118857653	+	L1ME3A	LINE	L1	5583	6161	-12	2
2492	chr3	79909435	79909436	chunk0126_270_1	12.80806	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	79909435	79909991	-118385568	+	MER41A	LTR	ERV1	1	554	0	2
2493	chr3	80190134	80190135	chunk0126_286_1	4.77556	AR_DHT_Control	chr3	80190107	80190324	-118105235	-	HERVL40-int	LTR	ERVL	-5300	230	1	2
2494	chr3	80770660	80770661	chunk0126_302_1	6.93299	AR_DHT_Control	chr3	80770587	80770950	-117524609	-	LTR1A2	LTR	ERV1	-435	348	1	2
2495	chr3	81186333	81186334	chunk0126_310_1	45.9922	AR_DHT_Control	chr3	81186010	81186593	-117108966	+	MSTB-int	LTR	ERVL-MaLR	26	622	-1029	2
2496	chr3	82118133	82118134	chunk0126_338_1	5.38748	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	82117436	82119060	-116176499	+	L1PA7	LINE	L1	4636	6154	0	2
2497	chr3	83047229	83047230	chunk0126_359_1	90.2186	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	83047058	83047284	-115248275	+	L1ME3A	LINE	L1	4583	4795	-1351	2
2498	chr3	84106326	84106327	chunk0126_374_1	81.02333	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	84106303	84106672	-114188887	+	L1MD2	LINE	L1	6362	6744	-6	2
2499	chr3	85006145	85006146	chunk0126_401_1	9.74084	AR_DHT_Control	chr3	85006012	85006382	-113289177	+	MamRTE1	LINE	RTE-BovB	3415	3803	-9	2
2500	chr3	85367497	85367498	chunk0126_409_1	5.98931	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	85367406	85367590	-112927969	+	L2c	LINE	L2	3203	3387	0	2
2501	chr3	86345793	86345794	chunk0126_423_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	86344750	86346089	-111949470	-	L1MA2	LINE	L1	-4834	2731	826	2
2502	chr3	86867527	86867528	chunk0126_426_1	38.7829	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	86867515	86867562	-111427997	+	(TTTATTG)n	Simple_repeat	Simple_repeat	1	48	0	2
2503	chr3	87185800	87185801	chunk0126_450_1	30.6265	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	87185766	87185838	-111109721	-	Tigger1	DNA	TcMar-Tigger	-2351	67	1	2
2504	chr3	74119010	74119011	chunk0126_50_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	74118990	74119083	-124176476	-	MER102c	DNA	hAT-Charlie	-251	80	2	2
2505	chr3	74717471	74717472	chunk0126_83_1	6.84874	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	74717039	74718013	-123577546	-	L1ME1	LINE	L1	-1902	4419	3451	2
2506	chr3	74718882	74718883	chunk0126_84_1	20.49712	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	74718658	74719272	-123576287	-	L1MB7	LINE	L1	-3171	3473	3280	2
2507	chr3	90020331	90020332	chunk0127_104_1	46.7397	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	90020090	90020606	-108274953	+	L1MEh	LINE	L1	858	1351	-884	2
2508	chr3	94418724	94418725	chunk0127_148_1	7.48058	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	94417948	94424424	-103871135	+	L1PA15	LINE	L1	288	6783	-2	2
2509	chr3	95227322	95227323	chunk0127_174_1	7.36432	AR_DHT_Control	chr3	95227181	95227410	-103068149	+	LTR33	LTR	ERVL	157	400	-115	2
2510	chr3	95366333	95366334	chunk0127_179_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	95366110	95366452	-102929107	+	MER77	LTR	ERVL	8	395	-209	2
2511	chr3	88182843	88182844	chunk0127_18_1	22.1084	AR_DHT_Control	chr3	88181952	88188095	-110107464	+	L1PA6	LINE	L1	5	6151	-3	2
2512	chr3	96416532	96416533	chunk0127_208_1	9.69227	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	96416159	96417162	-101878397	-	L1PA14	LINE	L1	-5307	1382	136	2
2513	chr3	96750550	96750551	chunk0127_228_1	6.05516	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	96749935	96751121	-101544438	+	MER52C	LTR	ERV1	2	1278	0	2
2514	chr3	96883625	96883626	chunk0127_239_1	5.99997	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	96882769	96883671	-101411888	-	L1PB1	LINE	L1	-356	6511	5623	2
2515	chr3	88365085	88365086	chunk0127_24_1	24.12315	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	88364875	88365132	-109930427	-	MIR	SINE	MIR	-3	259	2	2
2516	chr3	96915646	96915647	chunk0127_240_1	8.27376	AR_DHT_Control	chr3	96915496	96915676	-101379883	-	MIRb	SINE	MIR	-58	210	23	2
2517	chr3	97188803	97188804	chunk0127_253_1	6.3145	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	97188734	97188966	-101106593	+	L1ME3G	LINE	L1	613	867	-57	2
2518	chr3	97485409	97485410	chunk0127_266_1	28.4265	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	97485245	97485423	-100810136	-	MER45A	DNA	hAT-Tip100	-1	177	1	2
2519	chr3	88581980	88581981	chunk0127_28_1	9.13774	AR_DHT_Control	chr3	88581974	88581991	-109713568	+	(CA)n	Simple_repeat	Simple_repeat	1	17	0	2
2520	chr3	97928373	97928374	chunk0127_289_1	35.7399	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	97926059	97928576	-100366983	+	L1PA15	LINE	L1	3629	6165	0	2
2521	chr3	98162142	98162143	chunk0127_295_1	20.6152	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	98161993	98163665	-100131894	-	MLT1A1-int	LTR	ERVL-MaLR	0	1735	1	2
2522	chr3	98225361	98225362	chunk0127_298_1	18.36249	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	98225209	98225398	-100070161	-	MER31-int	LTR	ERV1	-544	5643	5443	2
2523	chr3	87766857	87766858	chunk0127_3_1	58.8887	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	87766416	87767295	-110528264	+	L1MB8	LINE	L1	111	989	-5878	2
2524	chr3	100683332	100683333	chunk0127_344_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	100683040	100683781	-97611778	+	MER52A	LTR	ERV1	1027	1755	0	2
2525	chr3	101792833	101792834	chunk0127_367_1	21.44018	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	101791675	101793620	-96501939	-	L1PA14	LINE	L1	-406	5928	2208	2
2526	chr3	102007294	102007295	chunk0127_378_1	11.1716	AR_DHT_Control	chr3	102007255	102007432	-96288127	+	LTR16A	LTR	ERVL	1	184	-267	2
2527	chr3	102055537	102055538	chunk0127_379_1	43.9748	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	102055532	102055692	-96239867	-	MIRb	SINE	MIR	-5	257	93	2
2528	chr3	88802202	88802203	chunk0127_41_1	5.193	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	88801197	88802742	-109492817	-	L1PA13	LINE	L1	0	6163	4681	2
2529	chr3	102635294	102635295	chunk0127_423_1	6.92693	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	102635278	102635890	-95659669	-	L1M8	LINE	L1	-413	1942	1276	2
2530	chr3	89162893	89162894	chunk0127_55_1	5.77762	AR_DHT_Control	chr3	89162546	89162974	-109132585	-	LTR16A	LTR	ERVL	-2	449	4	2
2531	chr3	89666007	89666008	chunk0127_84_1	17.55633	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	89665006	89667663	-108627896	-	L1MEc	LINE	L1	-964	5355	2710	2
2532	chr3	89914799	89914800	chunk0127_94_1	6.83133	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	89914412	89915209	-108380350	-	LTR1E	LTR	ERV1	0	804	1	2
2533	chr3	106026077	106026078	chunk0128_102_1	49.7519	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	106025134	106026625	-92268934	+	L1MEi	LINE	L1	122	1763	-449	2
2534	chr3	106086166	106086167	chunk0128_106_1	7.86105	AR_DHT_Control	chr3	106086148	106086563	-92208996	-	MER72B	LTR	ERV1	-8	760	329	2
2535	chr3	106457427	106457428	chunk0128_125_1	15.31692	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	106457178	106457708	-91837851	+	MLT1F1	LTR	ERVL-MaLR	1	561	-8	2
2536	chr3	106946079	106946080	chunk0128_145_1	18.70584	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	106945961	106946193	-91349366	+	L1MEi	LINE	L1	1466	1703	-509	2
2537	chr3	107171311	107171312	chunk0128_157_1	5.82105	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	107170462	107172085	-91123474	+	THE1D-int	LTR	ERVL-MaLR	1	1631	0	2
2538	chr3	107504635	107504636	chunk0128_191_1	9.25776	AR_DHT_Control	chr3	107504524	107504751	-90790808	+	MLT1J2	LTR	ERVL-MaLR	60	323	-125	2
2539	chr3	107712667	107712668	chunk0128_199_1	6.84874	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	107712176	107712766	-90582793	+	L2	LINE	L2	2253	2834	-585	2
2540	chr3	108409903	108409904	chunk0128_238_1	28.29585	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	108409652	108409978	-89885581	+	L1ME3G	LINE	L1	263	519	-373	2
2541	chr3	110399494	110399495	chunk0128_264_1	5.6425	AR_DHT_Control	chr3	110399476	110399574	-87895985	+	L2a	LINE	L2	3247	3350	-76	2
2542	chr3	110909809	110909810	chunk0128_284_1	13.02758	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	110909529	110909868	-87385691	+	MamRep434	DNA	TcMar-Tigger	49	420	-6	2
2543	chr3	112406771	112406772	chunk0128_343_1	14.60937	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	112406678	112406896	-85888663	-	L1MA9	LINE	L1	0	6312	6089	2
2544	chr3	112440727	112440728	chunk0128_348_1	61.3723	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	112439466	112442594	-85852965	+	L1PA16	LINE	L1	3348	6522	-112	2
2545	chr3	113390422	113390423	chunk0128_377_1	7.36432	AR_DHT_Control	chr3	113388286	113392711	-84902848	+	L1MA3	LINE	L1	3288	7724	0	2
2546	chr3	113508730	113508731	chunk0128_379_1	51.891	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	113507947	113509254	-84786305	+	L1MB7	LINE	L1	4802	6183	-1	2
2547	chr3	113523404	113523405	chunk0128_381_1	81.7667	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	113522831	113525375	-84770184	-	MER89-int	LTR	ERV1	0	6801	4163	2
2548	chr3	104659132	104659133	chunk0128_45_1	8.64577	AR_DHT_Control	chr3	104657930	104659273	-93636286	-	L1MA4A	LINE	L1	-4106	3460	2068	2
2549	chr3	104696320	104696321	chunk0128_47_1	74.9432	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr3	104690949	104697119	-93598440	-	L1PA6	LINE	L1	0	6154	1	2
2550	chr3	104811136	104811137	chunk0128_49_1	46.80257	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	104810933	104811142	-93484417	-	7SK	RNA	RNA	-99	232	23	2
2551	chr3	104947197	104947198	chunk0128_59_1	9.34963	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	104947157	104948722	-93346837	-	L1PA13	LINE	L1	-815	5331	3758	2
2552	chr3	105357100	105357101	chunk0128_75_1	12.4153	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	105357063	105357256	-92938303	-	MER63A	DNA	hAT-Blackjack	-6	204	1	2
2553	chr3	105654186	105654187	chunk0128_87_1	7.48058	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	105654022	105654385	-92641174	-	LTR78B	LTR	ERV1	-605	691	283	2
2554	chr3	103686088	103686089	chunk0128_9_1	8.95381	AR_DHT_Control	chr3	103685982	103686148	-94609411	-	L1MA9	LINE	L1	-525	5787	5619	2
2555	chr3	119602481	119602482	chunk0129_104_1	37.4115	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	119601620	119602599	-78692960	-	L1M5	LINE	L1	-1927	4219	3194	2
2556	chr3	120492319	120492320	chunk0129_146_1	10.60169	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	120492068	120495825	-77799734	+	HERVIP10B3-int	LTR	ERV1	3825	7603	0	2
2557	chr3	120591394	120591395	chunk0129_155_1	8.9624	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	120590150	120591678	-77703881	+	L1M5	LINE	L1	3196	4759	-1387	2
2558	chr3	120802406	120802407	chunk0129_172_1	17.9487	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	120801784	120802493	-77493066	+	L3	LINE	CR1	3195	3927	-172	2
2559	chr3	121109615	121109616	chunk0129_188_1	8.27376	AR_DHT_Control	chr3	121106242	121112620	-77182939	-	L1PA10	LINE	L1	-1	6352	5	2
2560	chr3	121362683	121362684	chunk0129_197_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	121360073	121363852	-76931707	-	L1MA1	LINE	L1	-3672	3893	16	2
2561	chr3	117076417	117076418	chunk0129_20_1	4.46949	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	117076262	117076440	-81219119	-	MIR	SINE	MIR	-33	229	50	2
2562	chr3	121709388	121709389	chunk0129_205_1	8.27403	AR_DHT_Control	chr3	121708752	121710480	-76585079	+	L1ME2z	LINE	L1	2171	4036	-2283	2
2563	chr3	121799984	121799985	chunk0129_213_1	7.82111	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	121799880	121800008	-76495551	+	LTR37B	LTR	ERV1	8	154	-314	2
2564	chr3	121907818	121907819	chunk0129_226_1	14.0237	AR_DHT_Control	chr3	121902360	121908514	-76387045	-	L1PA6	LINE	L1	-1	6153	6	2
2565	chr3	121958669	121958670	chunk0129_228_1	6.93824	AR_DHT_Control	chr3	121958343	121958818	-76336741	+	L1M1	LINE	L1	2702	3184	-4381	2
2566	chr3	123068808	123068809	chunk0129_278_1	124.89	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	123068662	123069013	-75226546	-	L2b	LINE	L2	-5	3370	3044	2
2567	chr3	123185101	123185102	chunk0129_282_1	6.89429	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	123184973	123185250	-75110309	-	MER1B	DNA	hAT-Charlie	0	339	1	2
2568	chr3	123338487	123338488	chunk0129_289_1	7.38582	AR_DHT_Control	chr3	123338380	123338500	-74957059	-	Mam_R4	LINE	Dong-R4	-303	3506	3383	2
2569	chr3	123597777	123597778	chunk0129_294_1	17.09085	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	123597563	123597922	-74697637	-	LTR40A1	LTR	ERVL	-191	393	1	2
2570	chr3	123602425	123602426	chunk0129_295_1	6.3364	AR_DHT_Control	chr3	123602292	123602600	-74692959	+	LTR57	LTR	ERVL	91	404	-7	2
2571	chr3	117223366	117223367	chunk0129_30_1	13.6548	AR_DHT_Control	chr3	117223173	117223418	-81072141	-	L1ME3Cz	LINE	L1	-3	994	724	2
2572	chr3	123874842	123874843	chunk0129_311_1	6.70128	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	123873832	123875660	-74419899	+	L1ME1	LINE	L1	4318	6157	-22	2
2573	chr3	123919281	123919282	chunk0129_312_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	123919245	123921647	-74373912	+	L1MA7	LINE	L1	1159	3330	-3515	2
2574	chr3	124854190	124854191	chunk0129_347_1	11.6192	AR_DHT_Control	chr3	124854153	124854776	-73440783	+	L1MB7	LINE	L1	5577	6165	-19	2
2575	chr3	117345807	117345808	chunk0129_37_1	28.8006	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	117345785	117345831	-80949728	+	(TTTCC)n	Simple_repeat	Simple_repeat	1	46	0	2
2576	chr3	125652417	125652418	chunk0129_375_1	4.06036	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	125652293	125652718	-72642841	+	MLT2F	LTR	ERVL	1	511	-152	2
2577	chr3	126076888	126076889	chunk0129_380_1	4.09301	AR_DHT_Control	chr3	126076589	126076982	-72218577	-	L1ME3B	LINE	L1	-76	6166	5747	2
2578	chr3	126472689	126472690	chunk0129_396_1	8.23158	AR_DHT_Control	chr3	126472481	126472735	-71822824	-	MER106B	DNA	hAT-Charlie	-708	351	57	2
2579	chr3	126732538	126732539	chunk0129_402_1	5.18995	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	126732166	126732686	-71562873	-	L1ME4a	LINE	L1	-18	6106	5603	2
2580	chr3	126956604	126956605	chunk0129_411_1	13.6438	AR_DHT_Control	chr3	126956600	126956628	-71338931	+	(GA)n	Simple_repeat	Simple_repeat	1	28	0	2
2581	chr3	127052067	127052068	chunk0129_414_1	5.0408	AR_DHT_Control	chr3	127051971	127052086	-71243473	+	MLT1H	LTR	ERVL-MaLR	75	191	-358	2
2582	chr3	127339493	127339494	chunk0129_424_1	4.81216	AR_DHT_Control	chr3	127338714	127339544	-70956015	+	(AC)n	Simple_repeat	Simple_repeat	1	832	0	2
2583	chr3	127613562	127613563	chunk0129_433_1	12.5575	AR_DHT_Control	chr3	127613383	127613599	-70681960	-	MIR	SINE	MIR	-1	267	4	2
2584	chr3	127817617	127817618	chunk0129_437_1	21.4985	AR_DHT_Control	chr3	127817497	127817627	-70477932	-	L2c	LINE	L2	-5	3382	3248	2
2585	chr3	128127165	128127166	chunk0129_446_1	28.68375	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	128126791	128127202	-70168357	+	MLT1K	LTR	ERVL-MaLR	1	466	-129	2
2586	chr3	128146690	128146691	chunk0129_447_1	6.69935	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	128146270	128146865	-70148694	+	(TG)n	Simple_repeat	Simple_repeat	1	595	0	2
2587	chr3	128235678	128235679	chunk0129_450_1	24.5425	AR_DHT_Control	chr3	128235673	128235845	-70059714	-	L1ME3G	LINE	L1	-362	562	392	2
2588	chr3	117508029	117508030	chunk0129_57_1	4.96282	AR_DHT_Control	chr3	117507559	117508065	-80787494	-	MER4D	LTR	ERV1	0	903	392	2
2589	chr3	117591955	117591956	chunk0129_62_1	16.63759	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	117590273	117592429	-80703130	-	L1MC3	LINE	L1	0	7785	5596	2
2590	chr3	118430367	118430368	chunk0129_83_1	26.4605	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	118430147	118430369	-79865190	-	L1PA15	LINE	L1	-298	5867	5644	2
2591	chr3	119130978	119130979	chunk0129_88_1	7.36432	AR_DHT_Control	chr3	119130083	119136227	-79159332	+	L1PA6	LINE	L1	1	6154	0	2
2592	chr3	119463870	119463871	chunk0129_94_1	14.50027	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr3	119463820	119464016	-78831543	-	MIRc	SINE	MIR	-23	245	19	2
2593	chr3	130906910	130906911	chunk0130_100_1	9.77812	AR_DHT_Control	chr3	130906829	130906961	-67388598	-	L1ME1	LINE	L1	-1305	4841	4716	2
2594	chr3	131158242	131158243	chunk0130_106_1	6.98682	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	131157576	131159483	-67136076	+	L1PA13	LINE	L1	11	1953	-4832	2
2595	chr3	131422133	131422134	chunk0130_117_1	25.1881	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr3	131421969	131422461	-66873098	+	MLT1H	LTR	ERVL-MaLR	12	537	-12	2
2596	chr3	132180461	132180462	chunk0130_134_1	5.73666	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	132180363	132180548	-66115011	-	MER91B	DNA	hAT-Tip100	-9	181	1	2
2597	chr3	132304047	132304048	chunk0130_150_1	6.09452	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	132303681	132309950	-65985609	+	Harlequin-int	LTR	ERV1	635	6895	-1	2
2598	chr3	132714171	132714172	chunk0130_164_1	24.2577	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	132713981	132714348	-65581211	-	MER58B	DNA	hAT-Charlie	-4	337	1	2
2599	chr3	132988326	132988327	chunk0130_165_1	6.04605	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	132987940	132988486	-65307073	-	MLT1G1	LTR	ERVL-MaLR	-5	574	1	2
2600	chr3	134236781	134236782	chunk0130_223_1	53.4241	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	134236309	134236805	-64058754	+	L1M4	LINE	L1	4344	4876	-1270	2
2601	chr3	135786972	135786973	chunk0130_251_1	23.26654	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	135786795	135787068	-62508491	-	L2a	LINE	L2	-1	3425	3077	2
2602	chr3	136141815	136141816	chunk0130_263_1	5.37222	AR_DHT_Control	chr3	136141785	136142212	-62153347	-	L2b	LINE	L2	-699	2720	2209	2
2603	chr3	136461257	136461258	chunk0130_282_1	6.28518	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	136460613	136461574	-61833985	+	L1MA4	LINE	L1	4870	5812	-1750	2
2604	chr3	136566808	136566809	chunk0130_287_1	30.6378	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	136566606	136566949	-61728610	+	L1MC5a	LINE	L1	219	595	-2182	2
2605	chr3	136894039	136894040	chunk0130_294_1	9.02259	AR_DHT_Control	chr3	136893757	136894683	-61400876	-	ERVL-E-int	LTR	ERVL	-406	5261	4171	2
2606	chr3	136925702	136925703	chunk0130_296_1	21.0236	AR_DHT_Control	chr3	136925327	136926183	-61369376	-	L1MD1	LINE	L1	-2	6240	5290	2
2607	chr3	138609597	138609598	chunk0130_337_1	19.65981	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	138609533	138609641	-59685918	+	(CT)n	Simple_repeat	Simple_repeat	1	108	0	2
2608	chr3	138689153	138689154	chunk0130_342_1	6.26854	AR_DHT_Control	chr3	138689120	138689207	-59606352	-	AluSx3	SINE	Alu	-24	287	197	2
2609	chr3	138727705	138727706	chunk0130_348_1	46.34917	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	138727308	138727709	-59567850	+	MLT1E3	LTR	ERVL-MaLR	146	624	0	2
2610	chr3	138768092	138768093	chunk0130_353_1	4.66817	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	138767448	138769230	-59526329	-	MER52A	LTR	ERV1	0	1755	1	2
2611	chr3	140704878	140704879	chunk0130_416_1	7.2534	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	140704801	140705181	-57590378	-	MSTB	LTR	ERVL-MaLR	-2	424	3	2
2612	chr3	141176987	141176988	chunk0130_438_1	16.7908	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	141176288	141177187	-57118372	+	L1MD1	LINE	L1	5351	6238	-4	2
2613	chr3	141455968	141455969	chunk0130_456_1	15.49797	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	141455758	141456149	-56839410	+	MER115	DNA	hAT-Tip100	279	688	-5	2
2614	chr3	130685203	130685204	chunk0130_81_1	15.94926	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	130685135	130685407	-67610152	+	L1MA7	LINE	L1	5990	6290	-1	2
2615	chr3	130778089	130778090	chunk0130_88_1	9.68843	AR_DHT_Control	chr3	130777572	130778118	-67517441	+	L1MA9	LINE	L1	5751	6274	-38	2
2616	chr3	130888167	130888168	chunk0130_98_1	7.58612	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	130885939	130888933	-67406626	-	L1M1	LINE	L1	-4517	3048	20	2
2617	chr3	130905611	130905612	chunk0130_99_1	6.67113	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	130904109	130905699	-67389860	-	L1MC4a	LINE	L1	-16	7866	6181	2
2618	chr3	146019659	146019660	chunk0131_147_1	8.83557	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	146019271	146019693	-52275866	-	LTR16B2	LTR	ERVL	0	462	4	2
2619	chr3	146374519	146374520	chunk0131_155_1	10.88655	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	146374492	146374600	-51920959	+	MIRb	SINE	MIR	142	253	-15	2
2620	chr3	146871128	146871129	chunk0131_170_1	6.25826	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	146870808	146871758	-51423801	-	L1PA16	LINE	L1	-1460	5389	4439	2
2621	chr3	148631541	148631542	chunk0131_198_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	148630638	148637401	-49658158	+	L1MA3	LINE	L1	813	7724	0	2
2622	chr3	148655655	148655656	chunk0131_199_1	9.19742	AR_DHT_Control	chr3	148655322	148656382	-49639177	-	L1PA16	LINE	L1	-770	5396	4393	2
2623	chr3	149659246	149659247	chunk0131_256_1	116.54852	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	149659211	149659287	-48636272	+	MIRb	SINE	MIR	176	253	-15	2
2624	chr3	150194321	150194322	chunk0131_274_1	58.9458	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	150194320	150194344	-48101215	+	(T)n	Simple_repeat	Simple_repeat	1	24	0	2
2625	chr3	150228196	150228197	chunk0131_275_1	6.10159	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	150227823	150228258	-48067301	+	LTR41B	LTR	ERVL	1	458	-300	2
2626	chr3	150314753	150314754	chunk0131_282_1	9.83641	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	150314749	150314792	-47980767	+	(T)n	Simple_repeat	Simple_repeat	1	43	0	2
2627	chr3	151101387	151101388	chunk0131_323_1	6.58746	AR_DHT_Control	chr3	151101271	151101470	-47194089	-	MIR	SINE	MIR	-1	261	43	2
2628	chr3	151120543	151120544	chunk0131_327_1	36.4466	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	151120272	151120745	-47174814	+	L1ME4b	LINE	L1	272	798	-1979	2
2629	chr3	151147135	151147136	chunk0131_330_1	20.59741	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	151147069	151147208	-47148351	-	L1MC5	LINE	L1	-5	9299	9149	2
2630	chr3	151816370	151816371	chunk0131_355_1	5.1	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	151816170	151816567	-46478992	+	L2c	LINE	L2	2924	3352	-35	2
2631	chr3	151969465	151969466	chunk0131_362_1	14.1561	AR_DHT_Control	chr3	151969074	151969483	-46326076	-	LTR16A	LTR	ERVL	-35	416	1	2
2632	chr3	151996642	151996643	chunk0131_368_1	9.2143	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	151996383	151996848	-46298711	-	L2b	LINE	L2	-253	3122	2582	2
2633	chr3	152484572	152484573	chunk0131_390_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	152483810	152484990	-45810569	-	L1PA16	LINE	L1	-4834	2019	851	2
2634	chr3	152505709	152505710	chunk0131_391_1	8.7059	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	152502367	152506468	-45789091	-	L1M1	LINE	L1	-3380	4185	2	2
2635	chr3	141703399	141703400	chunk0131_4_1	9.21264	AR_DHT_Control	chr3	141702980	141704079	-56591480	+	L1PB1	LINE	L1	3621	4730	-1416	2
2636	chr3	154089735	154089736	chunk0131_453_1	9.1351	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	154089524	154089737	-44205822	-	MER102a	DNA	hAT-Charlie	-48	282	73	2
2637	chr3	154169612	154169613	chunk0132_1_1	7.86105	AR_DHT_Control	chr3	154169249	154169698	-44125861	+	Tigger17a	DNA	TcMar-Tigger	2	455	-199	2
2638	chr3	155973525	155973526	chunk0132_119_1	51.077	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	155973302	155973767	-42321792	-	MLT1C	LTR	ERVL-MaLR	-4	463	1	2
2639	chr3	156140216	156140217	chunk0132_129_1	11.18906	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	156139964	156140300	-42155259	+	MER113	DNA	hAT-Charlie	68	385	-136	2
2640	chr3	156654406	156654407	chunk0132_157_1	7.33982	AR_DHT_Control	chr3	156654223	156655267	-41640292	-	L2a	LINE	L2	-315	3111	1817	2
2641	chr3	157691825	157691826	chunk0132_216_1	15.32536	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	157691438	157691922	-40603637	-	L1ME3G	LINE	L1	-283	641	121	2
2642	chr3	158467383	158467384	chunk0132_233_1	20.86154	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	158467371	158467505	-39828054	+	MIRc	SINE	MIR	85	242	-26	2
2643	chr3	154584962	154584963	chunk0132_24_1	11.1588	AR_DHT_Control	chr3	154584841	154585133	-43710426	-	L1MD2	LINE	L1	-12	6347	6053	2
2644	chr3	159170069	159170070	chunk0132_263_1	17.62216	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	159170036	159170186	-39125373	-	Charlie4z	DNA	hAT-Charlie	-1	166	23	2
2645	chr3	159963125	159963126	chunk0132_286_1	22.0805	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	159962772	159963341	-38332218	-	Tigger2b_Pri	DNA	TcMar-Tigger	-228	840	274	2
2646	chr3	160179951	160179952	chunk0132_296_1	22.45253	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	160179670	160179993	-38115566	-	MSTD	LTR	ERVL-MaLR	0	396	38	2
2647	chr3	160569971	160569972	chunk0132_312_1	4.42675	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	160569962	160570303	-37725256	-	MLT1A0	LTR	ERVL-MaLR	-12	353	2	2
2648	chr3	161226015	161226016	chunk0132_335_1	14.61083	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	161225988	161226158	-37069401	+	MIR3	SINE	MIR	10	187	-21	2
2649	chr3	154772281	154772282	chunk0132_36_1	4.9245	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	154770320	154773595	-43521964	-	L1PA14	LINE	L1	-3957	4184	7	2
2650	chr3	154784707	154784708	chunk0132_37_1	9.42003	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	154784370	154784990	-43510569	-	L1M5	LINE	L1	-1411	4735	4109	2
2651	chr3	162835504	162835505	chunk0132_371_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	162835116	162836105	-35459454	-	L1M1	LINE	L1	-5775	1790	12	2
2652	chr3	162868716	162868717	chunk0132_372_1	11.946	AR_DHT_Control	chr3	162867801	162872544	-35423015	+	L1P2	LINE	L1	1	4683	-1463	2
2653	chr3	164609091	164609092	chunk0132_423_1	5.95444	AR_DHT_Control	chr3	164608864	164609219	-33686340	+	MER57C1	LTR	ERV1	3	376	-9	2
2654	chr3	165169125	165169126	chunk0132_444_1	16.37661	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	165163837	165169955	-33125604	-	L1PA6	LINE	L1	0	6154	4	2
2655	chr3	155019721	155019722	chunk0132_52_1	5.82105	AR_DHT_Control	chr3	155019610	155020203	-43275356	+	L2a	LINE	L2	2722	3417	-9	2
2656	chr3	155525435	155525436	chunk0132_87_1	6.48643	AR_DHT_Control	chr3	155525225	155525545	-42770014	+	MLT1A0	LTR	ERVL-MaLR	1	365	0	2
2657	chr3	168566277	168566278	chunk0133_123_1	10.4004	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	168563970	168566594	-29728965	-	MER57A-int	LTR	ERV1	-1775	5762	3285	2
2658	chr3	169428266	169428267	chunk0133_151_1	5.56779	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	169428239	169428564	-28866995	-	MER1B	DNA	hAT-Charlie	0	339	1	2
2659	chr3	170033757	170033758	chunk0133_174_1	7.27655	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	170033690	170033923	-28261636	-	MLT1L	LTR	ERVL-MaLR	-338	272	11	2
2660	chr3	170949398	170949399	chunk0133_212_1	34.7415	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	170949263	170949462	-27346097	-	Tigger1	DNA	TcMar-Tigger	-2220	198	5	2
2661	chr3	171532244	171532245	chunk0133_243_1	6.42963	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	171531538	171532773	-26762786	-	ERVL-B4-int	LTR	ERVL	-494	5220	3999	2
2662	chr3	171679073	171679074	chunk0133_254_1	12.4402	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr3	171678688	171679206	-26616353	+	L2c	LINE	L2	2828	3384	-3	2
2663	chr3	171917912	171917913	chunk0133_269_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	171917735	171918154	-26377405	-	ERV3-16A3_LTR	LTR	ERVL	-7	415	1	2
2664	chr3	172002687	172002688	chunk0133_273_1	4.83532	AR_DHT_Control	chr3	172002604	172002729	-26292830	+	L1MD	LINE	L1	3012	3156	-2990	2
2665	chr3	165883935	165883936	chunk0133_30_1	47.5901	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	165883883	165883962	-32411597	+	(AT)n	Simple_repeat	Simple_repeat	1	81	0	2
2666	chr3	172513686	172513687	chunk0133_320_1	171.40898	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	172513620	172513729	-25781830	+	Tigger16b	DNA	TcMar-Tigger	223	334	-2	2
2667	chr3	172946128	172946129	chunk0133_345_1	11.6192	AR_DHT_Control	chr3	172945211	172947410	-25348149	+	L1M1	LINE	L1	1	2153	-5412	2
2668	chr3	174168867	174168868	chunk0133_386_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	174163431	174170229	-24125330	-	L1PA16	LINE	L1	-5	6864	1	2
2669	chr3	174537599	174537600	chunk0133_413_1	13.4316	AR_DHT_Control	chr3	174537452	174537717	-23757842	-	L2c	LINE	L2	-1	3386	3104	2
2670	chr3	174906165	174906166	chunk0133_430_1	23.98815	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	174906074	174906275	-23389284	+	L4_C_Mam	LINE	RTE-X	4702	4912	-226	2
2671	chr3	166865535	166865536	chunk0133_66_1	6.7814	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	166864950	166866369	-31429190	+	MER52D	LTR	ERV1	481	2115	-8	2
2672	chr3	166980947	166980948	chunk0133_70_1	21.58844	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	166980911	166981616	-31313943	+	L1MB8	LINE	L1	4673	5414	-750	2
2673	chr3	167105423	167105424	chunk0133_77_1	6.58746	AR_DHT_Control	chr3	167105187	167105598	-31189961	+	LTR80A	LTR	ERVL	135	583	0	2
2674	chr3	165322786	165322787	chunk0133_9_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	165321586	165323502	-32972057	-	L1MA3	LINE	L1	-5589	1976	9	2
2675	chr3	177372805	177372806	chunk0134_129_1	80.5166	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	177372589	177373229	-20922330	-	MamRep1151	LTR?	LTR?	-20	689	28	2
2676	chr3	175428621	175428622	chunk0134_14_1	5.69226	AR_DHT_Control	chr3	175428557	175428842	-22866717	+	L2	LINE	L2	2553	2854	-565	2
2677	chr3	178054647	178054648	chunk0134_168_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	178054547	178054759	-20240800	-	L3	LINE	CR1	-3415	684	470	2
2678	chr3	178357753	178357754	chunk0134_195_1	6.25826	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	178356261	178359185	-19936374	+	L1MA7	LINE	L1	2210	5460	-831	2
2679	chr3	178391892	178391893	chunk0134_197_1	6.86162	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	178391447	178391950	-19903609	+	L1M5	LINE	L1	5255	5789	-335	2
2680	chr3	179137014	179137015	chunk0134_240_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	179136874	179138035	-19157524	+	L1P4b	LINE	L1	10	1126	-6208	2
2681	chr3	179927570	179927571	chunk0134_291_1	6.6833	AR_DHT_Control	chr3	179927460	179927742	-18367817	+	MER5C	DNA	hAT-Charlie	3	292	-21	2
2682	chr3	180165913	180165914	chunk0134_295_1	7.22694	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	180161977	180166819	-18128740	-	L1PA17	LINE	L1	-958	4812	6	2
2683	chr3	180666774	180666775	chunk0134_302_1	33.9129	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	180666673	180667306	-17628253	+	L1MEh	LINE	L1	765	1730	-777	2
2684	chr3	180845779	180845780	chunk0134_307_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	180845303	180845820	-17449739	-	L1MA8	LINE	L1	-5058	2508	1948	2
2685	chr3	180863767	180863768	chunk0134_310_1	11.8043	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	180863317	180863928	-17431631	+	L1MB8	LINE	L1	2683	3315	-2831	2
2686	chr3	182571454	182571455	chunk0134_351_1	4.88663	AR_DHT_Control	chr3	182571436	182571501	-15724058	+	L2b	LINE	L2	3300	3364	-11	2
2687	chr3	182605931	182605932	chunk0134_352_1	5.62266	AR_DHT_Control	chr3	182605792	182606853	-15688706	+	L1MC3	LINE	L1	6717	7785	0	2
2688	chr3	182642883	182642884	chunk0134_358_1	16.01427	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	182642819	182643019	-15652540	-	MIRc	SINE	MIR	0	268	40	2
2689	chr3	182777254	182777255	chunk0134_372_1	8.73763	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	182776925	182778127	-15517432	-	L1M2	LINE	L1	-5414	2152	719	2
2690	chr3	183409420	183409421	chunk0134_427_1	43.771	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	183409344	183409543	-14886016	+	MIRb	SINE	MIR	36	260	-8	2
2691	chr3	183689108	183689109	chunk0134_441_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	183688949	183689171	-14606388	-	L1M4	LINE	L1	-2152	5730	5525	2
2692	chr3	175346985	175346986	chunk0134_6_1	5.89231	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	175346903	175347063	-22948496	-	MIRb	SINE	MIR	-1	267	86	2
2693	chr3	184011693	184011694	chunk0135_1_1	4.24356	AR_DHT_Control	chr3	184011316	184012009	-14283550	+	L1MD2	LINE	L1	5397	6129	-230	2
2694	chr3	186941597	186941598	chunk0135_112_1	62.17198	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	186941309	186941730	-11353829	+	L3	LINE	CR1	3548	3999	-100	2
2695	chr3	188193154	188193155	chunk0135_188_1	15.7352	AR_DHT_Control	chr3	188193105	188193236	-10102323	+	MamRep605	LTR?	LTR?	476	607	-242	2
2696	chr3	188528673	188528674	chunk0135_219_1	11.84729	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	188528564	188528792	-9766767	-	MIRc	SINE	MIR	-7	261	32	2
2697	chr3	188863533	188863534	chunk0135_246_1	6.26854	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	188863384	188863545	-9432014	+	MIR3	SINE	MIR	32	201	-7	2
2698	chr3	184718678	184718679	chunk0135_27_1	5.0408	AR_DHT_Control	chr3	184718540	184718816	-13576743	-	L2c	LINE	L2	-217	3170	2870	2
2699	chr3	189430864	189430865	chunk0135_285_1	7.43227	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	189430094	189431732	-8863827	+	L1PBa	LINE	L1	3	1637	-5226	2
2700	chr3	184806256	184806257	chunk0135_29_1	37.37854	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	184806234	184806324	-13489235	+	L2b	LINE	L2	3273	3359	-16	2
2701	chr3	189815649	189815650	chunk0135_302_1	15.127	AR_DHT_Control	chr3	189815544	189815672	-8479887	-	MER102a	DNA	hAT-Charlie	-175	155	31	2
2702	chr3	190044989	190044990	chunk0135_320_1	6.87382	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	190044753	190045282	-8250277	-	L2a	LINE	L2	-4	3422	2857	2
2703	chr3	190732142	190732143	chunk0135_366_1	20.2219	AR_DHT_Control	chr3	190731812	190732149	-7563410	-	MER61B	LTR	ERV1	0	427	1	2
2704	chr3	191235768	191235769	chunk0135_383_1	5.82105	AR_DHT_Control	chr3	191235058	191235997	-7059562	-	LTR78	LTR	ERV1	-13	1291	295	2
2705	chr3	191801373	191801374	chunk0135_394_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	191801328	191802745	-6492814	+	L1MB3	LINE	L1	678	2115	-4734	2
2706	chr3	194075517	194075518	chunk0135_443_1	21.90753	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	194075285	194075792	-4219767	+	L1ME2	LINE	L1	5607	6167	-277	2
2707	chr3	184121191	184121192	chunk0135_8_1	69.3503	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	184121157	184121240	-14174319	+	L1MB7	LINE	L1	5379	5460	-724	2
2708	chr4	3362965	3362966	chunk0136_114_1	6.62034	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	3362336	3363185	-186851370	+	(GT)n	Simple_repeat	Simple_repeat	1	855	0	2
2709	chr4	3714604	3714605	chunk0136_123_1	5.9729	AR_DHT_Control	chr4	3714212	3715026	-186499529	+	(GT)n	Simple_repeat	Simple_repeat	1	823	0	2
2710	chr4	95104	95105	chunk0136_15_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	94965	95288	-190119267	+	MER61C	LTR	ERV1	84	422	-6	2
2711	chr4	5680384	5680385	chunk0136_158_1	6.48643	AR_DHT_Control	chr4	5679810	5680524	-184534031	-	Tigger3b	DNA	TcMar-Tigger	-509	722	2	2
2712	chr4	5703491	5703492	chunk0136_159_1	8.96258	AR_DHT_Control	chr4	5703485	5703576	-184510979	-	MIR3	SINE	MIR	-110	98	8	2
2713	chr4	6556540	6556541	chunk0136_176_1	4.77556	AR_DHT_Control	chr4	6556113	6556573	-183657982	+	MLT2B1	LTR	ERVL	2	520	0	2
2714	chr4	6696419	6696420	chunk0136_179_1	39.50551	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	6696328	6696499	-183518056	+	MIRb	SINE	MIR	50	233	-35	2
2715	chr4	8792451	8792452	chunk0136_237_1	6.79459	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	8792056	8792855	-181421700	+	(CA)n	Simple_repeat	Simple_repeat	1	799	0	2
2716	chr4	10102942	10102943	chunk0136_247_1	9.40261	AR_DHT_Control	chr4	10102936	10102967	-180111588	+	(ATGA)n	Simple_repeat	Simple_repeat	1	31	0	2
2717	chr4	10421932	10421933	chunk0136_259_1	6.25826	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	10421810	10421939	-179792616	+	MER68	LTR	ERVL	6	147	-416	2
2718	chr4	10422296	10422297	chunk0136_260_1	7.36432	AR_DHT_Control	chr4	10421955	10422301	-179792254	+	MER68	LTR	ERVL	222	563	0	2
2719	chr3	194375723	194375724	chunk0136_264_1	9.06816	AR_DHT_Control	chr3	194375634	194375771	-3919788	+	MIRb	SINE	MIR	115	255	-13	2
2720	chr3	194851457	194851458	chunk0136_283_1	65.87989	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	194851393	194851494	-3444065	+	L2	LINE	L2	53	148	-3271	2
2721	chr3	195095085	195095086	chunk0136_299_1	4.73472	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	195094961	195095102	-3200457	-	MER5A1	DNA	hAT-Charlie	0	166	2	2
2722	chr3	195134564	195134565	chunk0136_302_1	6.98722	AR_DHT_Control	chr3	195134539	195134601	-3160958	-	Tigger3c	DNA	TcMar-Tigger	-128	474	413	2
2723	chr4	887690	887691	chunk0136_32_1	6.96641	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	886984	887914	-189326641	+	(GCACAC)n	Simple_repeat	Simple_repeat	1	954	0	2
2724	chr3	195419494	195419495	chunk0136_324_1	15.5235	AR_DHT_Control	chr3	195419429	195419546	-2876013	-	HY1	scRNA	scRNA	0	119	1	2
2725	chr3	195718555	195718556	chunk0136_340_1	40.1377	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	195718522	195718895	-2576664	+	MER4-int	LTR	ERV1	1845	2165	-4166	2
2726	chr3	196073416	196073417	chunk0136_366_1	5.75839	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	196073253	196073437	-2222122	+	AluJb	SINE	Alu	82	282	-30	2
2727	chr3	196970886	196970887	chunk0136_394_1	131.9228	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr3	196970716	196971576	-1323983	-	MER54A	LTR	ERVL	0	901	3	2
2728	chr4	1160555	1160556	chunk0136_42_1	150.2463	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	1160005	1160894	-189053661	+	L1MEc	LINE	L1	2196	3200	-3119	2
2729	chr3	197823922	197823923	chunk0136_438_1	95.1335	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	197823789	197824063	-471496	-	HAL1	LINE	L1	-165	2342	2069	2
2730	chr3	197961052	197961053	chunk0136_446_1	6.58498	AR_DHT_Control	chr3	197960985	197961316	-334243	+	L2c	LINE	L2	3051	3377	-10	2
2731	chr4	2101870	2101871	chunk0136_73_1	7.33982	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	2101269	2104232	-188110323	+	L1M2	LINE	L1	10	2867	-3982	2
2732	chr4	2430659	2430660	chunk0136_82_1	18.5977	AR_DHT_Control	chr4	2430656	2430788	-187783767	+	FLAM_A	SINE	Alu	1	129	-13	2
2733	chr4	2534050	2534051	chunk0136_87_1	7.42871	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	2534017	2534290	-187680265	-	AluSx1	SINE	Alu	-11	301	1	2
2734	chr4	13723506	13723507	chunk0137_106_1	15.15667	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	13723113	13724179	-176490376	-	L1MD1	LINE	L1	0	6242	5182	2
2735	chr4	15661359	15661360	chunk0137_146_1	7.2534	AR_DHT_Control	chr4	15661325	15661434	-174553121	+	MIR	SINE	MIR	121	259	-3	2
2736	chr4	17544943	17544944	chunk0137_183_1	17.67853	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	17544880	17545069	-172669486	-	L2a	LINE	L2	-9	3417	3149	2
2737	chr4	18213348	18213349	chunk0137_205_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	18213347	18213852	-172000703	-	L1PA15	LINE	L1	-5492	1294	352	2
2738	chr4	19767821	19767822	chunk0137_217_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	19767763	19768517	-170446038	-	L1M2	LINE	L1	-6408	1158	360	2
2739	chr4	20009845	20009846	chunk0137_223_1	19.92487	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	20009663	20009886	-170204669	-	MER20	DNA	hAT-Charlie	0	219	1	2
2740	chr4	28181962	28181963	chunk0137_423_1	7.97539	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	28180939	28183992	-162030563	-	L1MA4	LINE	L1	-7	7712	4562	2
2741	chr4	29119389	29119390	chunk0137_446_1	17.3852	AR_DHT_Control	chr4	29118621	29119637	-161094918	-	L1MC1	LINE	L1	-630	5703	4660	2
2742	chr4	11842820	11842821	chunk0137_63_1	36.975	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	11842744	11843075	-178371480	-	Tigger3a	DNA	TcMar-Tigger	-12	336	4	2
2743	chr4	13109705	13109706	chunk0137_83_1	21.4911	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	13109270	13109804	-177104751	+	MLT2B4	LTR	ERVL	2	556	0	2
2744	chr4	36099760	36099761	chunk0138_106_1	26.753	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	36099669	36099810	-154114745	+	MIR	SINE	MIR	6	163	-99	2
2745	chr4	36230625	36230626	chunk0138_113_1	22.31318	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	36230601	36230682	-153983873	+	L1ME3A	LINE	L1	6058	6161	-12	2
2746	chr4	36722824	36722825	chunk0138_131_1	6.81252	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	36722813	36722838	-153491717	+	(AT)n	Simple_repeat	Simple_repeat	1	25	0	2
2747	chr4	37883044	37883045	chunk0138_171_1	93.4736	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	37882781	37883107	-152331448	-	Charlie18a	DNA	hAT-Charlie	-5	337	1	2
2748	chr4	38867264	38867265	chunk0138_213_1	18.10058	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	38867091	38867362	-151347193	-	L1ME4a	LINE	L1	-299	5825	5619	2
2749	chr4	39207853	39207854	chunk0138_228_1	5.33775	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	39205925	39208303	-151006252	+	L1MEf	LINE	L1	15	2598	-4042	2
2750	chr4	39300550	39300551	chunk0138_230_1	9.21264	AR_DHT_Control	chr4	39300430	39300811	-150913744	+	L1MC1	LINE	L1	5450	5850	-483	2
2751	chr4	40114915	40114916	chunk0138_260_1	4.34317	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	40114569	40115215	-150099340	-	L1MEd	LINE	L1	-2365	3781	2998	2
2752	chr4	41178754	41178755	chunk0138_305_1	6.58498	AR_DHT_Control	chr4	41178646	41178848	-149035707	-	MIRc	SINE	MIR	-31	237	3	2
2753	chr4	41636868	41636869	chunk0138_340_1	26.3238	AR_DHT_Control	chr4	41636774	41636887	-148577668	+	L1ME3A	LINE	L1	5833	5957	-216	2
2754	chr4	42081411	42081412	chunk0138_355_1	7.36432	AR_DHT_Control	chr4	42080791	42081557	-148132998	-	Charlie1a	DNA	hAT-Charlie	-551	904	2	2
2755	chr4	31223381	31223382	chunk0138_36_1	60.0053	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	31223251	31223445	-158991110	+	LTR86A2	LTR	ERVL	98	281	-227	2
2756	chr4	42217395	42217396	chunk0138_364_1	17.3029	AR_DHT_Control	chr4	42217247	42217503	-147997052	+	L1ME3A	LINE	L1	5799	6048	-125	2
2757	chr4	42321010	42321011	chunk0138_369_1	5.73469	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	42320966	42321060	-147893495	-	L1MD	LINE	L1	-2540	5455	5365	2
2758	chr4	43799334	43799335	chunk0138_410_1	7.42302	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	43796600	43799452	-146415103	+	L1M1	LINE	L1	22	2981	-4665	2
2759	chr4	45346610	45346611	chunk0138_432_1	12.9706	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	45346533	45346673	-144867882	-	MIRb	SINE	MIR	-98	170	31	2
2760	chr4	31682837	31682838	chunk0138_52_1	6.67115	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	31682773	31683320	-158531235	-	MLT1E2	LTR	ERVL-MaLR	0	653	55	2
2761	chr4	31748391	31748392	chunk0138_53_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	31747576	31748699	-158465856	-	MER52A	LTR	ERV1	0	1278	1	2
2762	chr4	33332296	33332297	chunk0138_66_1	9.69227	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	33331687	33334302	-156880253	+	L1PA15-16	LINE	L1	1	2426	-4427	2
2763	chr4	35762005	35762006	chunk0138_93_1	11.643	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	35761617	35762842	-154451713	+	L1P4b	LINE	L1	4168	5407	-1907	2
2764	chr4	51107425	51107426	chunk0139_102_1	204.1469	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	51107158	51107565	-139106990	-	SAR	Satellite	Satellite	-4	407	1	2
2765	chr4	54144897	54144898	chunk0139_177_1	36.56642	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr4	54144748	54144909	-136069646	+	MIRc	SINE	MIR	59	251	-17	2
2766	chr4	54772468	54772469	chunk0139_196_1	22.6927	AR_DHT_Control	chr4	54771855	54772817	-135441738	+	L2a	LINE	L2	2351	3426	0	2
2767	chr4	55330767	55330768	chunk0139_229_1	18.8118	AR_DHT_Control	chr4	55330287	55330872	-134883683	+	LTR26	LTR	ERV1	1	603	0	2
2768	chr4	56260513	56260514	chunk0139_251_1	20.01236	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	56260484	56260843	-133953712	+	MLT2C1	LTR	ERVL	1	342	-55	2
2769	chr4	56572213	56572214	chunk0139_261_1	64.9928	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	56571851	56572410	-133642145	-	Tigger3b	DNA	TcMar-Tigger	-698	533	2	2
2770	chr4	57101086	57101087	chunk0139_281_1	9.76623	AR_DHT_Control	chr4	57101060	57101164	-133113391	-	MIRc	SINE	MIR	-5	263	170	2
2771	chr4	48405560	48405561	chunk0139_30_1	5.6425	AR_DHT_Control	chr4	48405363	48407712	-141806843	-	HAL1M8	LINE	L1	0	2991	562	2
2772	chr4	58147219	58147220	chunk0139_316_1	21.57883	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	58146236	58148705	-132065850	+	L1M4	LINE	L1	2683	5191	-955	2
2773	chr4	58260575	58260576	chunk0139_318_1	16.16174	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	58260451	58261216	-131953339	+	L1MC1	LINE	L1	5584	6333	0	2
2774	chr4	58811520	58811521	chunk0139_330_1	40.6719	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	58811469	58811617	-131402938	+	L1MA3	LINE	L1	6157	6304	-1	2
2775	chr4	48432278	48432279	chunk0139_34_1	7.74912	AR_DHT_Control	chr4	48432252	48432316	-141782239	+	L1ME4b	LINE	L1	280	349	-543	2
2776	chr4	60286949	60286950	chunk0139_358_1	109.4385	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	60286940	60288101	-129926454	-	L1P3	LINE	L1	-1562	4584	3434	2
2777	chr4	60872671	60872672	chunk0139_375_1	160.91369	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh	chr4	60872364	60872680	-129341875	+	LTR16E2	LTR	ERVL	157	489	-79	2
2778	chr4	48592339	48592340	chunk0139_39_1	5.24053	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	48592115	48592451	-141622104	+	Charlie7	DNA	hAT-Charlie	87	466	-2146	2
2779	chr4	62419593	62419594	chunk0139_393_1	5.56779	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	62418497	62424151	-127790404	-	HERVL-int	LTR	ERVL	0	5654	1	2
2780	chr4	62484463	62484464	chunk0139_394_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	62484230	62484760	-127729795	-	MLT1G1	LTR	ERVL-MaLR	0	579	1	2
2781	chr4	63280289	63280290	chunk0139_401_1	19.87834	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	63274715	63281297	-126933258	+	L1PA15	LINE	L1	1	6772	-13	2
2782	chr4	63302887	63302888	chunk0139_404_1	25.2388	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	63302747	63303598	-126910957	+	MER6	DNA	TcMar-Tigger	1	865	0	2
2783	chr4	63955070	63955071	chunk0139_416_1	8.41215	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	63955046	63955290	-126259265	-	L1MEf	LINE	L1	-4023	2219	1988	2
2784	chr4	49091256	49091257	chunk0139_62_1	5.6425	AR_DHT_Control	chr4	49091248	49112662	-141101893	+	(CATTC)n	Satellite	Satellite	1	21808	0	2
2785	chr4	49100293	49100294	chunk0139_66_1	29.85193	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	49091248	49112662	-141101893	+	(CATTC)n	Satellite	Satellite	1	21808	0	2
2786	chr4	49107457	49107458	chunk0139_71_1	81.323	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	49091248	49112662	-141101893	+	(CATTC)n	Satellite	Satellite	1	21808	0	2
2787	chr4	49108384	49108385	chunk0139_72_1	11.2832	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	49091248	49112662	-141101893	+	(CATTC)n	Satellite	Satellite	1	21808	0	2
2788	chr4	49118809	49118810	chunk0139_73_1	33.1285	AR_DHT_Control;Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	49110669	49156598	-141057957	+	(TCCAT)n	Simple_repeat	Simple_repeat	1	46892	0	2
2789	chr4	49314136	49314137	chunk0139_82_1	74.3021	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	49313977	49314438	-140900117	-	MER21B	LTR	ERVL	-132	799	200	2
2790	chr4	49490850	49490851	chunk0139_84_1	9.48857	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	49490411	49491539	-140723016	+	L1MA5	LINE	L1	4805	5946	-354	2
2791	chr4	49494997	49494998	chunk0139_86_1	18.6216	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr4	49494957	49495361	-140719194	+	MER61C	LTR	ERV1	11	428	0	2
2792	chr4	49574140	49574141	chunk0139_90_1	6.74565	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	49573983	49574223	-140640332	-	THE1D-int	LTR	ERVL-MaLR	-398	1233	955	2
2793	chr4	49575678	49575679	chunk0139_91_1	7.9445	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	49574690	49575992	-140638563	+	MSTA-int	LTR	ERVL-MaLR	28	1369	-262	2
2794	chr4	49709778	49709779	chunk0139_99_1	217.0417	Merged_Lncap_AR_Veh;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	49709068	49711961	-140502594	-	SAR	Satellite	Satellite	-9	2924	1	2
2795	chr4	68855145	68855146	chunk0140_119_1	8.09329	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	68855122	68855522	-121359033	+	MER57B1	LTR	ERV1	1	399	-2	2
2796	chr4	68935406	68935407	chunk0140_122_1	11.1716	AR_DHT_Control	chr4	68935330	68940692	-121273863	+	L1PA6	LINE	L1	770	6138	-16	2
2797	chr4	69095555	69095556	chunk0140_129_1	8.27376	AR_DHT_Control	chr4	69095090	69095734	-121118821	-	LTR26	LTR	ERV1	0	603	1	2
2798	chr4	65470857	65470858	chunk0140_14_1	11.1716	AR_DHT_Control	chr4	65470795	65471208	-124743347	+	MER57A1	LTR	ERV1	1	432	0	2
2799	chr4	69735746	69735747	chunk0140_173_1	34.4929	AR_DHT_Control	chr4	69735702	69735799	-120478756	+	L1MDa	LINE	L1	1150	1248	-5292	2
2800	chr4	69830770	69830771	chunk0140_180_1	27.99086	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	69828660	69832374	-120382181	-	HERV3-int	LTR	ERV1	-4722	3704	1	2
2801	chr4	69836555	69836556	chunk0140_183_1	16.36705	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	69836529	69836623	-120377932	+	L3	LINE	CR1	76	170	-3929	2
2802	chr4	69868825	69868826	chunk0140_185_1	93.2181	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	69868584	69869545	-120345010	+	MER4-int	LTR	ERV1	1498	2477	-4121	2
2803	chr4	70993099	70993100	chunk0140_223_1	4.42675	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	70992983	70993102	-119221453	+	MIR	SINE	MIR	34	160	-102	2
2804	chr4	71797189	71797190	chunk0140_264_1	10.1791	AR_DHT_Control	chr4	71791666	71797803	-118416752	-	L1PA6	LINE	L1	0	6327	179	2
2805	chr4	65242044	65242045	chunk0140_3_1	15.0063	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	65241173	65242746	-124971809	-	MER52A	LTR	ERV1	-9	1746	1	2
2806	chr4	72959709	72959710	chunk0140_301_1	9.21264	AR_DHT_Control	chr4	72959355	72963279	-117251276	+	L1PA15-16	LINE	L1	1465	4991	-1858	2
2807	chr4	73068377	73068378	chunk0140_309_1	7.47918	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	73068322	73068434	-117146121	+	MIRb	SINE	MIR	85	204	-64	2
2808	chr4	66226771	66226772	chunk0140_34_1	9.21264	AR_DHT_Control	chr4	66226203	66226978	-123987577	+	L1ME3	LINE	L1	5296	6133	-29	2
2809	chr4	74253784	74253785	chunk0140_361_1	9.69227	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	74253305	74254054	-115960501	+	L1M3e	LINE	L1	460	1235	-6254	2
2810	chr4	74990212	74990213	chunk0140_389_1	6.70128	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	74990074	74990303	-115224252	-	L2	LINE	L2	-829	2590	2357	2
2811	chr4	75532666	75532667	chunk0140_403_1	6.83133	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	75531977	75533545	-114681010	-	THE1B-int	LTR	ERVL-MaLR	0	1580	1	2
2812	chr4	76115725	76115726	chunk0140_427_1	46.2584	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	76115707	76115812	-114098743	-	L4_C_Mam	LINE	RTE-X	-379	4759	4629	2
2813	chr4	76127985	76127986	chunk0140_429_1	6.3126	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	76127846	76128129	-114086426	+	L1MD2	LINE	L1	25	327	-6220	2
2814	chr4	76387182	76387183	chunk0140_449_1	9.50609	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	76386645	76387404	-113827151	+	L1MA2	LINE	L1	144	925	-6640	2
2815	chr4	76434961	76434962	chunk0140_452_1	20.7679	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	76434921	76435032	-113779523	-	MER5B	DNA	hAT-Charlie	0	178	68	2
2816	chr4	76496220	76496221	chunk0140_457_1	5.6425	AR_DHT_Control	chr4	76495813	76496293	-113718262	-	L2	LINE	L2	-2105	1314	765	2
2817	chr4	67454188	67454189	chunk0140_70_1	7.36432	AR_DHT_Control	chr4	67454036	67454409	-122760146	-	Tigger3b	DNA	TcMar-Tigger	-833	398	1	2
2818	chr4	67465155	67465156	chunk0140_71_1	5.28628	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	67465010	67466073	-122748482	+	L1PBa	LINE	L1	660	1644	-5219	2
2819	chr4	79258376	79258377	chunk0141_102_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	79257987	79259677	-110954878	+	MER52A	LTR	ERV1	1	1748	-7	2
2820	chr4	79895274	79895275	chunk0141_121_1	5.95444	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	79894133	79895998	-110318557	-	L1MD1	LINE	L1	-1218	5319	3381	2
2821	chr4	82308813	82308814	chunk0141_162_1	5.0921	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	82308176	82309268	-107905287	-	L1M1	LINE	L1	-3953	3612	2513	2
2822	chr4	84319385	84319386	chunk0141_203_1	40.39991	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	84319377	84319415	-105895140	+	(GTTTT)n	Simple_repeat	Simple_repeat	1	40	0	2
2823	chr4	84772997	84772998	chunk0141_228_1	12.51048	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	84772979	84773031	-105441524	+	A-rich	Low_complexity	Low_complexity	1	54	0	2
2824	chr4	85014433	85014434	chunk0141_244_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	85014232	85014525	-105200030	+	ERV3-16A3_I-int	LTR	ERVL	4838	5152	-74	2
2825	chr4	85032649	85032650	chunk0141_247_1	43.5555	AR_DHT_Control	chr4	85032387	85032803	-105181752	-	MER51B	LTR	ERV1	0	377	1	2
2826	chr4	85567317	85567318	chunk0141_252_1	8.09329	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	85566608	85567584	-104646971	-	L2a	LINE	L2	0	3426	2427	2
2827	chr4	76880872	76880873	chunk0141_29_1	37.465	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	76880824	76880898	-113333657	+	L1ME4a	LINE	L1	5535	5610	-514	2
2828	chr4	87241459	87241460	chunk0141_319_1	31.66237	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	87241124	87241727	-102972828	+	L1MB7	LINE	L1	18	607	-6910	2
2829	chr4	87432603	87432604	chunk0141_338_1	30.8164	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	87432438	87433147	-102781408	-	L1M3	LINE	L1	-1942	4198	3497	2
2830	chr4	88177810	88177811	chunk0141_378_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	88177501	88180453	-102034102	+	L1MA4	LINE	L1	16	3021	-4544	2
2831	chr4	88362151	88362152	chunk0141_393_1	44.5987	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	88361775	88362255	-101852300	+	MER34C	LTR	ERV1	60	547	-4	2
2832	chr4	88372054	88372055	chunk0141_394_1	6.73404	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	88371418	88372838	-101841717	+	L1MA4	LINE	L1	2698	4092	-2051	2
2833	chr4	88600348	88600349	chunk0141_412_1	126.71251	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	88600277	88600487	-101614068	-	Tigger17	DNA	TcMar-Tigger	-23	2650	2433	2
2834	chr4	88976854	88976855	chunk0141_436_1	52.0739	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	88976505	88977073	-101237482	+	Tigger3c	DNA	TcMar-Tigger	1	592	-10	2
2835	chr4	77472340	77472341	chunk0141_51_1	5.44099	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	77471227	77473371	-112741184	+	L1PA15-16	LINE	L1	1	1825	-5324	2
2836	chr4	77604641	77604642	chunk0141_54_1	10.6535	AR_DHT_Control	chr4	77604440	77604694	-112609861	+	L3	LINE	CR1	3768	4002	-97	2
2837	chr4	77679855	77679856	chunk0141_61_1	7.2534	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	77679626	77680417	-112534138	-	L1ME5	LINE	L1	-306	5888	5044	2
2838	chr4	78227608	78227609	chunk0141_78_1	6.7814	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	78227430	78227896	-111986659	+	MamRTE1	LINE	RTE-BovB	3253	3765	-47	2
2839	chr4	79133089	79133090	chunk0141_96_1	11.7947	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	79133068	79133297	-111081258	+	MIRb	SINE	MIR	1	268	0	2
2840	chr4	89898229	89898230	chunk0142_12_1	5.3309	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	89898205	89898444	-100316111	-	MIR	SINE	MIR	0	262	3	2
2841	chr4	94930670	94930671	chunk0142_145_1	7.48058	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	94930606	94930714	-95283841	-	L2c	LINE	L2	-57	3330	3243	2
2842	chr4	95591521	95591522	chunk0142_174_1	231.3856	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;Merged_Lncap_AR_Veh	chr4	95591483	95591592	-94622963	-	L2a	LINE	L2	-3	3423	3316	2
2843	chr4	96332500	96332501	chunk0142_187_1	9.06209	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	96332443	96332714	-93881841	+	AluSx4	SINE	Alu	37	307	-3	2
2844	chr4	97624441	97624442	chunk0142_211_1	82.1293	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	97623639	97624920	-92589635	-	L1PA10	LINE	L1	-12	6156	4854	2
2845	chr4	97775570	97775571	chunk0142_218_1	42.6528	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	97775467	97775575	-92438980	-	L2a	LINE	L2	-14	3412	3302	2
2846	chr4	98226647	98226648	chunk0142_225_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	98226108	98226772	-91987783	+	L1MEi	LINE	L1	1	670	-1542	2
2847	chr4	98861271	98861272	chunk0142_242_1	36.6941	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	98861199	98861683	-91352872	+	L2a	LINE	L2	2891	3425	-1	2
2848	chr4	98908961	98908962	chunk0142_246_1	57.08981	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	98908891	98908986	-91305569	+	MER94	DNA	hAT-Blackjack	35	130	-4	2
2849	chr4	99168651	99168652	chunk0142_261_1	5.1	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	99167336	99170108	-91044447	-	L1PB3	LINE	L1	-161	6762	3993	2
2850	chr4	99453901	99453902	chunk0142_274_1	4.53037	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	99448268	99455419	-90759136	-	L1PA14	LINE	L1	-21	8135	562	2
2851	chr4	99996633	99996634	chunk0142_283_1	232.4829	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr4	99996478	99996890	-90217665	-	MLT1B	LTR	ERVL-MaLR	0	390	1	2
2852	chr4	100074250	100074251	chunk0142_287_1	7.91804	AR_DHT_Control	chr4	100073777	100074604	-90139951	-	L1MC1	LINE	L1	-17	6316	5471	2
2853	chr4	100145640	100145641	chunk0142_291_1	6.58746	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	100144873	100146359	-90068196	+	MSTD-int	LTR	ERVL-MaLR	191	1730	-5	2
2854	chr4	100238233	100238234	chunk0142_294_1	34.46582	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	100238212	100238354	-89976201	-	L1MA5	LINE	L1	-2	6298	6161	2
2855	chr4	100444127	100444128	chunk0142_298_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	100443149	100445248	-89769307	-	L1MA9	LINE	L1	-5071	2495	403	2
2856	chr4	100592823	100592824	chunk0142_308_1	35.2798	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	100592744	100592827	-89621728	-	MER53	DNA	hAT	-108	85	2	2
2857	chr4	100593231	100593232	chunk0142_309_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	100592857	100593534	-89621021	+	MamGypLTR1a	LTR	Gypsy	30	778	-6	2
2858	chr4	101161235	101161236	chunk0142_328_1	39.5609	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	101160962	101161317	-89053238	+	Tigger3a	DNA	TcMar-Tigger	1	347	-1	2
2859	chr4	101210463	101210464	chunk0142_331_1	9.28592	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	101210337	101210561	-89003994	+	MIR	SINE	MIR	1	262	0	2
2860	chr4	102099001	102099002	chunk0142_377_1	16.47617	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	102098297	102099482	-88115073	+	L1ME1	LINE	L1	4855	6161	-18	2
2861	chr4	102312060	102312061	chunk0142_382_1	4.59338	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	102312015	102312139	-87902416	-	MIR	SINE	MIR	-25	237	79	2
2862	chr4	102776093	102776094	chunk0142_402_1	4.38465	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	102776091	102776187	-87438368	+	L1MB7	LINE	L1	5320	5415	-759	2
2863	chr4	103152689	103152690	chunk0142_415_1	24.8643	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	103152220	103152986	-87061569	+	L1ME1	LINE	L1	5337	6170	-9	2
2864	chr4	103272288	103272289	chunk0142_418_1	37.96932	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	103271103	103273590	-86940965	-	ERVL-B4-int	LTR	ERVL	-137	5577	3042	2
2865	chr4	105436710	105436711	chunk0142_445_1	4.83664	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	105435583	105437239	-84777316	+	L1PA15-16	LINE	L1	4470	6145	-714	2
2866	chr4	91256326	91256327	chunk0142_47_1	11.1716	AR_DHT_Control	chr4	91255588	91256671	-98957884	+	MER11B	LTR	ERVK	1	1236	0	2
2867	chr4	89839808	89839809	chunk0142_6_1	11.142	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	89839748	89839882	-100374673	-	MIRb	SINE	MIR	-63	205	66	2
2868	chr4	89848389	89848390	chunk0142_8_1	88.53622	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	89848092	89848401	-100366154	+	AluJb	SINE	Alu	1	306	-6	2
2869	chr4	94014651	94014652	chunk0142_89_1	17.19755	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	94014530	94014703	-96199852	+	L2a	LINE	L2	3224	3426	0	2
2870	chr4	109381414	109381415	chunk0143_116_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	109381394	109381544	-80833011	-	MLT1M	LTR	ERVL-MaLR	-465	207	63	2
2871	chr4	109728341	109728342	chunk0143_134_1	19.7212	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	109728020	109728386	-80486169	+	L2a	LINE	L2	3026	3426	0	2
2872	chr4	110248851	110248852	chunk0143_159_1	17.23785	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	110248491	110249142	-79965413	-	LTR62	LTR	ERVL	-1	708	48	2
2873	chr4	113761743	113761744	chunk0143_218_1	5.0408	AR_DHT_Control	chr4	113761738	113761855	-76452700	+	L1MDb	LINE	L1	597	712	-5697	2
2874	chr4	106056811	106056812	chunk0143_25_1	28.5925	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	106056757	106056820	-84157735	+	LTR84b	LTR	ERVL	121	184	-577	2
2875	chr4	116553287	116553288	chunk0143_269_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	116552609	116554170	-73660385	-	L1PA13	LINE	L1	-4988	1797	9	2
2876	chr4	119013401	119013402	chunk0143_310_1	16.44926	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	119013006	119014140	-71200415	+	Charlie1a	DNA	hAT-Charlie	1	1183	-272	2
2877	chr4	121572661	121572662	chunk0143_340_1	8.03974	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	121567208	121573466	-68641089	+	L1PA7	LINE	L1	8	6153	-1	2
2878	chr4	122252630	122252631	chunk0143_369_1	5.90945	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	122251984	122254093	-67960462	+	L1M1	LINE	L1	782	2933	-4632	2
2879	chr4	107392857	107392858	chunk0143_40_1	9.50609	AR_DHT_Control	chr4	107392856	107392881	-82821674	+	(ACAA)n	Simple_repeat	Simple_repeat	1	25	0	2
2880	chr4	124013861	124013862	chunk0143_440_1	4.83532	AR_DHT_Control	chr4	124008386	124014541	-66200014	-	L1PA6	LINE	L1	-1	6326	177	2
2881	chr4	108153850	108153851	chunk0143_78_1	14.15153	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	108153626	108154101	-82060454	+	L1ME4a	LINE	L1	5601	6107	-17	2
2882	chr4	108389621	108389622	chunk0143_95_1	10.88255	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	108389399	108390114	-81824441	+	L1MD1	LINE	L1	5557	6281	-352	2
2883	chr4	124754153	124754154	chunk0144_12_1	8.27376	AR_DHT_Control	chr4	124753979	124754203	-65460352	-	MIR	SINE	MIR	0	262	13	2
2884	chr4	128904579	128904580	chunk0144_125_1	23.165	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	128904533	128904597	-61309958	-	L1PA16	LINE	L1	-159	6007	5944	2
2885	chr4	130473733	130473734	chunk0144_152_1	40.9437	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	130473129	130474095	-59740460	-	L1M4b	LINE	L1	-1639	5367	4427	2
2886	chr4	132653264	132653265	chunk0144_169_1	9.83323	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	132652417	132654899	-57559656	-	L1MA4A	LINE	L1	-230	6775	4278	2
2887	chr4	132919111	132919112	chunk0144_174_1	11.7357	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	132918772	132919127	-57295428	-	L1ME3B	LINE	L1	-3107	3039	2683	2
2888	chr4	133310372	133310373	chunk0144_181_1	5.6425	AR_DHT_Control	chr4	133310229	133310491	-56904064	-	L1MA9	LINE	L1	-5707	1391	1126	2
2889	chr4	133696095	133696096	chunk0144_196_1	35.38326	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr4	133696060	133697411	-56517144	+	L1PA15	LINE	L1	5607	6679	-16	2
2890	chr4	133910398	133910399	chunk0144_204_1	6.48643	AR_DHT_Control	chr4	133904966	133911020	-56303535	-	L1PBa	LINE	L1	-460	6407	2	2
2891	chr4	135175613	135175614	chunk0144_241_1	5.18995	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	135174926	135175853	-55038702	+	HERV35I-int	LTR	ERV1	3402	5109	-3935	2
2892	chr4	135369153	135369154	chunk0144_245_1	12.3546	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	135368963	135369505	-54845050	+	MER41A	LTR	ERV1	3	554	0	2
2893	chr4	136070788	136070789	chunk0144_249_1	13.4489	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	136070592	136071682	-54142873	+	L1PA5	LINE	L1	5060	6149	-5	2
2894	chr4	136329141	136329142	chunk0144_251_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	136328217	136329912	-53884643	+	L1PA16	LINE	L1	32	1817	-4872	2
2895	chr4	136452861	136452862	chunk0144_253_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	136452349	136453677	-53760878	+	L1M3c	LINE	L1	9	2517	-4520	2
2896	chr4	136731075	136731076	chunk0144_260_1	14.0688	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	136731059	136732551	-53482004	-	L1M4	LINE	L1	-388	5796	4326	2
2897	chr4	138211184	138211185	chunk0144_284_1	4.06817	AR_DHT_Control	chr4	138209521	138211423	-52003132	+	L1PA16	LINE	L1	4275	6146	-20	2
2898	chr4	126202244	126202245	chunk0144_45_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	126201856	126202643	-64011912	-	LTR2752	LTR	ERV1	-489	774	1	2
2899	chr4	142589231	142589232	chunk0144_468_1	4.4788	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	142587789	142591032	-47623523	+	L1MC3	LINE	L1	3592	6862	-923	2
2900	chr4	127896251	127896252	chunk0144_74_1	8.27376	AR_DHT_Control	chr4	127896066	127896307	-62318248	-	MIRb	SINE	MIR	-8	260	9	2
2901	chr4	128504412	128504413	chunk0144_98_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	128504284	128505033	-61709522	-	LTR1E	LTR	ERV1	0	804	1	2
2902	chr4	128509785	128509786	chunk0144_99_1	13.6789	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	128509638	128510144	-61704411	-	Charlie17b	DNA	hAT-Charlie	-1	1203	679	2
2903	chr4	146377052	146377053	chunk0145_127_1	9.51255	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	146376648	146377238	-43837317	-	LTR10C	LTR	ERV1	0	591	1	2
2904	chr4	147637024	147637025	chunk0145_178_1	10.1162	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	147635722	147637645	-42576910	+	L1MA9	LINE	L1	4222	6203	-109	2
2905	chr4	148598615	148598616	chunk0145_238_1	69.65127	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	148596584	148599436	-41615119	-	L1PA5	LINE	L1	-3315	3004	174	2
2906	chr4	149025746	149025747	chunk0145_266_1	7.80475	AR_DHT_Control	chr4	149025501	149026145	-41188410	+	MLT2F	LTR	ERVL	18	644	-19	2
2907	chr4	149717015	149717016	chunk0145_281_1	9.21264	AR_DHT_Control	chr4	149716838	149717458	-40497097	+	MER21B	LTR	ERVL	216	862	-6	2
2908	chr4	149995961	149995962	chunk0145_292_1	10.5524	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	149995568	149995963	-40218592	+	MSTA	LTR	ERVL-MaLR	1	428	0	2
2909	chr4	150912774	150912775	chunk0145_338_1	47.1882	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	150912689	150913185	-39301370	-	L1MB2	LINE	L1	-2979	3161	2684	3
2910	chr4	150914033	150914034	chunk0145_340_1	7.80833	AR_DHT_Control	chr4	150913874	150914128	-39300427	-	L1MA1	LINE	L1	-8	6294	6025	3
2911	chr4	151022778	151022779	chunk0145_347_1	74.066	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	151022682	151022844	-39191711	+	L1M5	LINE	L1	5387	5577	-547	3
2912	chr4	153632426	153632427	chunk0145_450_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	153632304	153632489	-36582066	+	L2a	LINE	L2	3181	3422	-4	3
2913	chr4	144837408	144837409	chunk0145_46_1	10.1791	AR_DHT_Control	chr4	144836726	144842477	-45372078	+	L1PA6	LINE	L1	175	5956	-371	2
2914	chr4	144995959	144995960	chunk0145_47_1	43.7418	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	144995939	144996586	-45217969	+	L1M2a1	LINE	L1	5	645	-6471	2
2915	chr4	155042177	155042178	chunk0146_15_1	101.27014	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	155041989	155042730	-35171825	-	L1M5	LINE	L1	-317	5806	5054	3
2916	chr4	159723426	159723427	chunk0146_151_1	7.53305	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	159722046	159723699	-30490856	-	MER52A	LTR	ERV1	0	1755	1	3
2917	chr4	160496391	160496392	chunk0146_174_1	64.2624	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	160496191	160496736	-29717819	+	L1MEd	LINE	L1	1080	1994	-662	3
2918	chr4	160690656	160690657	chunk0146_176_1	52.0472	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	160689845	160692559	-29521996	+	L1PA15	LINE	L1	3479	6226	-559	3
2919	chr4	160770730	160770731	chunk0146_181_1	18.6332	AR_DHT_Control	chr4	160770700	160770862	-29443693	+	L2c	LINE	L2	2994	3157	-230	3
2920	chr4	161539399	161539400	chunk0146_211_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	161539390	161539426	-28675129	+	(GGATGT)n	Simple_repeat	Simple_repeat	1	37	0	3
2921	chr4	162318209	162318210	chunk0146_245_1	12.52551	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	162317449	162318465	-27896090	-	L1P4b	LINE	L1	-6352	982	17	3
2922	chr4	155304699	155304700	chunk0146_26_1	6.0927	AR_DHT_Control	chr4	155304634	155304733	-34909822	-	MLT1H2	LTR	ERVL-MaLR	-4	485	379	3
2923	chr4	155379905	155379906	chunk0146_28_1	116.2016	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	155379842	155379961	-34834594	+	L2a	LINE	L2	3302	3426	0	3
2924	chr4	168364762	168364763	chunk0146_374_1	7.36432	AR_DHT_Control	chr4	168364679	168366902	-21847653	+	L1MA6	LINE	L1	4064	6310	-1252	3
2925	chr4	154837074	154837075	chunk0146_4_1	14.8182	AR_DHT_Control	chr4	154836867	154838460	-35376095	-	HERVK22-int	LTR	ERVK	-1758	5079	3471	3
2926	chr4	169449330	169449331	chunk0146_432_1	23.347	AR_DHT_Control	chr4	169448685	169453420	-20761135	+	L1PA6	LINE	L1	177	4921	-1398	3
2927	chr4	169869602	169869603	chunk0146_445_1	23.43461	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	169869493	169869641	-20344914	+	MER103C	DNA	hAT-Charlie	73	220	-77	3
2928	chr4	170104097	170104098	chunk0146_454_1	6.48643	AR_DHT_Control	chr4	170102873	170105808	-20108747	+	L1M1	LINE	L1	3005	5929	-1636	3
2929	chr4	155679579	155679580	chunk0146_55_1	13.9303	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	155679298	155679725	-34534830	-	MSTB1	LTR	ERVL-MaLR	0	432	1	3
2930	chr4	156443907	156443908	chunk0146_65_1	8.1755	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	156443643	156443931	-33770624	+	AluSp	SINE	Alu	1	289	-24	3
2931	chr4	174207077	174207078	chunk0147_111_1	72.0164	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	174207000	174207180	-16007375	-	L1ME4b	LINE	L1	-5	887	704	3
2932	chr4	177303714	177303715	chunk0147_182_1	8.74268	AR_DHT_Control	chr4	177303640	177303837	-12910718	+	L2a	LINE	L2	3227	3421	-5	3
2933	chr4	182813371	182813372	chunk0147_238_1	6.09694	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	182813241	182813617	-7400938	+	(AC)n	Simple_repeat	Simple_repeat	1	394	0	3
2934	chr4	184308050	184308051	chunk0147_285_1	71.90494	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	184307774	184308217	-5906338	-	Tigger3b	DNA	TcMar-Tigger	-700	531	66	3
2935	chr4	184913439	184913440	chunk0147_313_1	50.9307	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	184913205	184913472	-5301083	-	AluJr	SINE	Alu	-18	294	1	3
2936	chr4	184951561	184951562	chunk0147_316_1	7.91724	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	184951118	184951784	-5262771	+	L1MB7	LINE	L1	5451	6167	-17	3
2937	chr4	185150540	185150541	chunk0147_325_1	7.36432	AR_DHT_Control	chr4	185150454	185151056	-5063499	+	Tigger17a	DNA	TcMar-Tigger	1	654	0	3
2938	chr4	185196099	185196100	chunk0147_327_1	36.5375	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	185196079	185196191	-5018364	+	MER112	DNA	hAT-Charlie	1	115	-146	3
2939	chr4	185464398	185464399	chunk0147_339_1	6.44773	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	185463983	185464405	-4750150	+	LTR84b	LTR	ERVL	160	610	-151	3
2940	chr4	185637575	185637576	chunk0147_348_1	14.29076	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	185637541	185637625	-4576930	+	MIRb	SINE	MIR	46	141	-127	3
2941	chr4	186248765	186248766	chunk0147_379_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	186248281	186249701	-3964854	-	L1MB7	LINE	L1	-148	6036	4558	3
2942	chr4	188354346	188354347	chunk0147_453_1	4.55016	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	188354196	188354954	-1859601	-	L1M3b	LINE	L1	-5537	744	1	3
2943	chr4	172712754	172712755	chunk0147_64_1	9.58976	AR_DHT_Control	chr4	172712694	172712779	-17501776	+	MIR	SINE	MIR	166	251	-11	3
2944	chr4	173380256	173380257	chunk0147_98_1	6.48643	AR_DHT_Control	chr4	173379784	173383574	-16830981	-	L1MB5	LINE	L1	-3	6171	2301	3
2945	chr5	4516453	4516454	chunk0148_107_1	30.90688	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	4516412	4516523	-177021736	-	MIRb	SINE	MIR	-73	195	71	3
2946	chr5	5120226	5120227	chunk0148_113_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	5117270	5120989	-176417270	-	L1PA14	LINE	L1	-2615	4058	64	3
2947	chr5	208771	208772	chunk0148_13_1	42.44945	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr5	208127	209066	-181329193	+	L1MDa	LINE	L1	16	1358	-5275	3
2948	chr5	6766680	6766681	chunk0148_164_1	6.71486	AR_DHT_Control	chr5	6766671	6766710	-174771549	+	(CTCC)n	Simple_repeat	Simple_repeat	1	40	0	3
2949	chr5	6830838	6830839	chunk0148_165_1	8.46481	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	6830503	6831197	-174707062	+	(ACAC)n	Simple_repeat	Simple_repeat	1	708	0	3
2950	chr5	8061152	8061153	chunk0148_188_1	58.02371	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	8060981	8061182	-173477077	+	AmnSINE1	SINE	5S-Deu-L2	347	538	-37	3
2951	chr5	57092	57093	chunk0148_2_1	15.94153	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr5	57012	57139	-181481120	+	L2b	LINE	L2	3247	3374	-1	3
2952	chr5	9208467	9208468	chunk0148_226_1	8.18895	AR_DHT_Control	chr5	9208381	9208481	-172329778	-	L2a	LINE	L2	-44	3382	3269	3
2953	chr5	10762738	10762739	chunk0148_278_1	6.10347	AR_DHT_Control	chr5	10762572	10763073	-170775186	+	L2a	LINE	L2	1860	2385	-1034	3
2954	chr5	12935986	12935987	chunk0148_308_1	6.73207	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	12935154	12935996	-168602263	+	HERVL18-int	LTR	ERVL	3	961	-5086	3
2955	chr5	13403881	13403882	chunk0148_312_1	6.49378	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	13403064	13403979	-168134280	-	L2	LINE	L2	-1568	1851	809	3
2956	chr5	13743922	13743923	chunk0148_317_1	5.41601	AR_DHT_Control	chr5	13743327	13744635	-167793624	+	L1MA5A	LINE	L1	4990	6297	0	3
2957	chr5	14898301	14898302	chunk0148_406_1	16.2346	AR_DHT_Control	chr5	14898128	14898436	-166639823	+	L1ME3Cz	LINE	L1	444	744	-253	3
2958	chr4	190177921	190177922	chunk0148_447_1	26.9965	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	190175761	190180287	-34268	+	BSR/Beta	Satellite	Satellite	1	4511	-8	3
2959	chr4	190179101	190179102	chunk0148_448_1	11.9014	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	190175761	190180287	-34268	+	BSR/Beta	Satellite	Satellite	1	4511	-8	3
2960	chr5	15892530	15892531	chunk0149_13_1	4.66817	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	15892160	15892547	-165645712	-	L2a	LINE	L2	-325	3101	2652	3
2961	chr5	20340231	20340232	chunk0149_158_1	30.7278	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	20338162	20341119	-161197140	+	MER52-int	LTR	ERV1	730	3519	-5400	3
2962	chr5	20694153	20694154	chunk0149_172_1	8.27376	AR_DHT_Control	chr5	20693998	20694328	-160843931	+	MLT1A1	LTR	ERVL-MaLR	74	408	0	3
2963	chr5	20832663	20832664	chunk0149_175_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	20832609	20832950	-160705309	-	L1MEc	LINE	L1	-5271	1152	795	3
2964	chr5	21219762	21219763	chunk0149_186_1	5.24411	AR_DHT_Control	chr5	21219479	21220053	-160318206	+	MER67B	LTR	ERV1	39	661	0	3
2965	chr5	24073418	24073419	chunk0149_266_1	52.41382	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr5	24073060	24073526	-157464733	+	MER70A	LTR	ERVL	7	472	0	3
2966	chr5	24088593	24088594	chunk0149_267_1	6.0927	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	24087841	24088909	-157449350	+	L1PA12	LINE	L1	610	2367	-4614	3
2967	chr5	16211840	16211841	chunk0149_27_1	4.57744	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	16211838	16212174	-165326085	+	MLT1H1	LTR	ERVL-MaLR	221	555	0	3
2968	chr5	25125471	25125472	chunk0149_282_1	11.6878	AR_DHT_Control	chr5	25125296	25125808	-156412451	-	L1MC4	LINE	L1	-267	7775	7238	3
2969	chr5	25331761	25331762	chunk0149_286_1	5.6425	AR_DHT_Control	chr5	25330451	25332075	-156206184	+	MER52D	LTR	ERV1	175	2114	-9	3
2970	chr5	26369159	26369160	chunk0149_318_1	5.38748	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	26369061	26369314	-155168945	-	L2a	LINE	L2	0	3426	3156	3
2971	chr5	26400312	26400313	chunk0149_319_1	5.08049	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	26399074	26404708	-155133551	-	HERVL-int	LTR	ERVL	0	5654	1	3
2972	chr5	27387745	27387746	chunk0149_348_1	18.051	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	27387674	27388093	-154150166	-	MER67C	LTR	ERV1	-294	417	1	3
2973	chr5	27639344	27639345	chunk0149_355_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	27638982	27639758	-153898501	-	L1M1	LINE	L1	-6766	799	9	3
2974	chr5	28067146	28067147	chunk0149_366_1	6.58746	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	28065970	28068895	-153469364	+	L1PA13	LINE	L1	3	3049	-3717	3
2975	chr5	28671017	28671018	chunk0149_386_1	78.8009	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr5	28670812	28671345	-152866914	-	LTR38	LTR	ERV1	-12	544	1	3
2976	chr5	29431795	29431796	chunk0149_413_1	13.67041	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	29431680	29432541	-152105718	+	L1ME3B	LINE	L1	3871	4750	-1396	3
2977	chr5	29498813	29498814	chunk0149_418_1	6.98682	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	29496717	29499681	-152038578	-	L1PA13	LINE	L1	-3704	3062	10	3
2978	chr5	29556521	29556522	chunk0149_423_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	29555540	29556923	-151981336	-	L1MA5	LINE	L1	-5051	2515	1094	3
2979	chr5	29791043	29791044	chunk0149_440_1	11.9014	AR_DHT_Control	chr5	29791025	29791218	-151747041	+	MLT2B4	LTR	ERVL	1	193	-363	3
2980	chr5	29993595	29993596	chunk0149_454_1	4.67225	AR_DHT_Control	chr5	29993333	29993695	-151544564	-	L2	LINE	L2	-974	2445	2065	3
2981	chr5	18507340	18507341	chunk0149_93_1	6.48857	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	18506975	18507421	-163030838	-	Tigger3	DNA	TcMar-Tigger	-31	2998	2561	3
2982	chr5	33317626	33317627	chunk0150_132_1	21.1067	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	33317061	33317858	-148220401	+	L1ME3B	LINE	L1	5188	5975	-267	3
2983	chr5	34246025	34246026	chunk0150_171_1	45.4186	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	34246025	34246133	-147292126	-	MER110	LTR	ERV1	-298	170	74	3
2984	chr5	34468608	34468609	chunk0150_176_1	4.83532	AR_DHT_Control	chr5	34468582	34468784	-147069475	-	MER4-int	LTR	ERV1	-4024	991	783	3
2985	chr5	34551135	34551136	chunk0150_185_1	6.73207	AR_DHT_Control	chr5	34550934	34551179	-146987080	+	MIR	SINE	MIR	20	262	0	3
2986	chr5	36876661	36876662	chunk0150_273_1	5.23393	AR_DHT_Control	chr5	36876604	36876685	-144661574	+	(CGG)n	Simple_repeat	Simple_repeat	1	85	0	3
2987	chr5	37029186	37029187	chunk0150_282_1	10.8017	AR_DHT_Control	chr5	37029148	37029761	-144508498	-	L1ME1	LINE	L1	-56	6108	5443	3
2988	chr5	37741433	37741434	chunk0150_309_1	6.48293	AR_DHT_Control	chr5	37741412	37741746	-143796513	-	MER1B	DNA	hAT-Charlie	0	339	1	3
2989	chr5	38521694	38521695	chunk0150_333_1	8.52761	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	38521475	38522150	-143016109	-	L1MA4A	LINE	L1	-5460	1389	703	3
2990	chr5	38907803	38907804	chunk0150_359_1	8.64577	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	38907139	38910728	-142627531	+	L1PA16	LINE	L1	105	3626	-3140	3
2991	chr5	39178288	39178289	chunk0150_374_1	7.80475	AR_DHT_Control	chr5	39178060	39178320	-142359939	-	MER103C	DNA	hAT-Charlie	0	297	36	3
2992	chr5	31895487	31895488	chunk0150_57_1	16.6858	AR_DHT_Control	chr5	31895209	31895561	-149642698	+	MLT1A0	LTR	ERVL-MaLR	1	365	0	3
2993	chr5	31990997	31990998	chunk0150_59_1	53.91269	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	31990649	31991033	-149547226	-	L2a	LINE	L2	0	3426	3024	3
2994	chr5	32153881	32153882	chunk0150_73_1	14.9998	AR_DHT_Control	chr5	32153409	32154268	-149383991	+	L1MC5a	LINE	L1	918	1793	-984	3
2995	chr5	32312875	32312876	chunk0150_89_1	5.78771	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	32312854	32312914	-149225345	+	(GCG)n	Simple_repeat	Simple_repeat	1	60	0	3
2996	chr5	43572693	43572694	chunk0151_116_1	4.84918	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	43571512	43574022	-137964237	-	LTR49-int	LTR	ERV1	-87	6244	3774	3
2997	chr5	49599670	49599671	chunk0151_151_1	165.1795	Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr5	49599387	49600983	-131937276	+	BSR/Beta	Satellite	Satellite	1	1593	-4	3
2998	chr5	49601625	49601626	chunk0151_153_1	95.471	Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr5	49601091	49603131	-131935128	+	(TGGAA)n	Simple_repeat	Simple_repeat	1	2051	0	3
2999	chr5	49658985	49658986	chunk0151_161_1	109.5162	Merged_Lncap_AR_Veh;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	49656288	49661871	-131876388	+	(TCCAT)n	Simple_repeat	Simple_repeat	1	5681	0	3
3000	chr5	49660999	49661000	chunk0151_164_1	21.67026	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr5	49656288	49661871	-131876388	+	(TCCAT)n	Simple_repeat	Simple_repeat	1	5681	0	3
3001	chr5	49661522	49661523	chunk0151_165_1	83.968	SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr5	49656288	49661871	-131876388	+	(TCCAT)n	Simple_repeat	Simple_repeat	1	5681	0	3
3002	chr5	49666502	49666503	chunk0151_168_1	28.23029	Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	49666173	49667431	-131870828	+	(CATTC)n	Satellite	Satellite	1	1263	0	3
3003	chr5	49666926	49666927	chunk0151_171_1	121.0649	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh;AR_DHT_Control	chr5	49666173	49667431	-131870828	+	(CATTC)n	Satellite	Satellite	1	1263	0	3
3004	chr5	51073138	51073139	chunk0151_234_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	51071922	51073712	-130464547	-	L1M2	LINE	L1	-4221	2886	35	3
3005	chr5	52548678	52548679	chunk0151_270_1	5.73469	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	52547980	52548864	-128989395	+	LTR1D1	LTR	ERV1	1	899	0	3
3006	chr5	52725861	52725862	chunk0151_278_1	83.5097	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr5	52725819	52726086	-128812173	+	MamRTE1	LINE	RTE-BovB	3174	3439	-373	3
3007	chr5	41833107	41833108	chunk0151_34_1	86.9193	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	41832364	41833777	-139704482	+	L1M1	LINE	L1	1756	3272	-4293	3
3008	chr5	54604172	54604173	chunk0151_355_1	8.09329	AR_DHT_Control	chr5	54604140	54604202	-126934057	+	L1M3	LINE	L1	5562	5627	-615	3
3009	chr5	54915813	54915814	chunk0151_367_1	57.6035	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	54915671	54916015	-126622244	+	LTR40A1	LTR	ERVL	24	357	-227	3
3010	chr5	55250399	55250400	chunk0151_384_1	14.02436	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	55250106	55250487	-126287772	-	L1MA9	LINE	L1	-2	6310	5903	3
3011	chr5	55527065	55527066	chunk0151_400_1	48.5614	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	55526978	55527089	-126011170	+	L2b	LINE	L2	3269	3375	0	3
3012	chr5	55620191	55620192	chunk0151_409_1	56.732	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	55620155	55620245	-125918014	+	L2b	LINE	L2	3276	3373	-2	3
3013	chr5	55635270	55635271	chunk0151_412_1	9.7346	AR_DHT_Control	chr5	55635254	55635486	-125902773	-	MIRb	SINE	MIR	0	268	7	3
3014	chr5	42215969	42215970	chunk0151_44_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	42211871	42216458	-139321801	-	L1MA1	LINE	L1	-2760	4805	15	3
3015	chr5	42415668	42415669	chunk0151_49_1	56.0825	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	42412311	42418555	-139119704	-	L1PA6	LINE	L1	0	6154	7	3
3016	chr5	42677679	42677680	chunk0151_77_1	5.75839	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	42677609	42677825	-138860434	+	MER30	DNA	hAT-Charlie	1	226	-4	3
3017	chr5	40896173	40896174	chunk0151_9_1	47.16709	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	40895383	40898205	-140640054	+	L1P2	LINE	L1	9	2842	-3304	3
3018	chr5	43077184	43077185	chunk0151_95_1	13.1909	AR_DHT_Control	chr5	43077021	43078006	-138460253	-	LTR5B	LTR	ERVK	0	1002	1	3
3019	chr5	58416321	58416322	chunk0152_103_1	6.13843	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	58416044	58416540	-123121719	+	LTR33	LTR	ERVL	1	497	-18	3
3020	chr5	58699451	58699452	chunk0152_118_1	123.1889	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	58693939	58700099	-122838160	-	L1PA6	LINE	L1	-7	6147	4	3
3021	chr5	58761063	58761064	chunk0152_120_1	14.12058	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	58761030	58761064	-122777195	+	(TC)n	Simple_repeat	Simple_repeat	1	34	0	3
3022	chr5	59231623	59231624	chunk0152_147_1	262.4322	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	59231278	59231633	-122306626	+	MLT1J2	LTR	ERVL-MaLR	15	425	-23	3
3023	chr5	59715668	59715669	chunk0152_179_1	6.9834	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	59714826	59715703	-121822556	+	HERVL18-int	LTR	ERVL	2720	3579	-2468	3
3024	chr5	59748882	59748883	chunk0152_180_1	32.3801	AR_DHT_Control	chr5	59748819	59749099	-121789160	+	MLT1F	LTR	ERVL-MaLR	227	525	-23	3
3025	chr5	59894024	59894025	chunk0152_193_1	5.77762	AR_DHT_Control	chr5	59893996	59894030	-121644229	+	(GCAGCA)n	Simple_repeat	Simple_repeat	1	34	0	3
3026	chr5	60326161	60326162	chunk0152_217_1	23.66538	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	60325611	60326371	-121211888	-	L1MD1	LINE	L1	-14	6228	5452	3
3027	chr5	63758008	63758009	chunk0152_359_1	10.9345	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	63757865	63758449	-117779810	+	LTR10C	LTR	ERV1	1	591	0	3
3028	chr5	64591895	64591896	chunk0152_384_1	7.3267	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	64591836	64591935	-116946324	-	L2b	LINE	L2	-17	3358	3260	3
3029	chr5	65925815	65925816	chunk0152_425_1	5.66005	AR_DHT_Control	chr5	65925813	65925888	-115612371	+	(CCCT)n	Simple_repeat	Simple_repeat	1	79	0	3
3030	chr5	66120762	66120763	chunk0152_437_1	14.3513	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	66120643	66120819	-115417440	+	MER3	DNA	hAT-Charlie	2	182	-27	3
3031	chr5	66415395	66415396	chunk0152_452_1	8.15319	AR_DHT_Control	chr5	66415319	66415931	-115122328	+	L1MB7	LINE	L1	5546	6168	-16	3
3032	chr5	68759593	68759594	chunk0153_122_1	6.18774	AR_DHT_Control	chr5	68759582	68759724	-112778535	+	L2c	LINE	L2	3099	3242	-133	3
3033	chr5	68985011	68985012	chunk0153_133_1	28.69884	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	68984875	68985138	-112553121	+	L1MEi	LINE	L1	1181	1436	-776	3
3034	chr5	69343184	69343185	chunk0153_153_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	69343046	69343465	-112194794	-	L1MB7	LINE	L1	-1258	4888	4512	3
3035	chr5	70401562	70401563	chunk0153_161_1	7.36432	AR_DHT_Control	chr5	70400852	70402000	-111136259	+	LTR12E	LTR	ERV1	1	1167	-155	3
3036	chr5	72273695	72273696	chunk0153_238_1	33.8861	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	72273386	72274071	-109264188	-	Tigger3b	DNA	TcMar-Tigger	0	1231	536	3
3037	chr5	72940119	72940120	chunk0153_276_1	24.92772	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	72939954	72940703	-108597556	+	L1M7	LINE	L1	66	913	-5305	3
3038	chr5	73307589	73307590	chunk0153_288_1	28.27172	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	73307473	73307640	-108230619	+	L1ME3A	LINE	L1	5968	6164	-9	3
3039	chr5	75357063	75357064	chunk0153_401_1	37.02881	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	75357058	75357568	-106180691	+	L1MB2	LINE	L1	5573	6061	-110	3
3040	chr5	75496162	75496163	chunk0153_411_1	5.193	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	75496048	75496957	-106041302	+	L1ME1	LINE	L1	5210	6173	-6	3
3041	chr5	75668896	75668897	chunk0153_419_1	6.98722	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	75668796	75668951	-105869308	+	MER5A1	DNA	hAT-Charlie	2	166	0	3
3042	chr5	75864918	75864919	chunk0153_427_1	6.05516	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	75864695	75865984	-105672275	+	ERV3-16A3_I-int	LTR	ERVL	2695	4002	-1224	3
3043	chr5	76379937	76379938	chunk0153_446_1	7.91804	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	76379818	76380027	-105158232	+	MIRc	SINE	MIR	11	246	-22	3
3044	chr5	67926556	67926557	chunk0153_69_1	6.04605	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	67925965	67926916	-113611343	-	L1M5	LINE	L1	-1318	4828	3776	3
3045	chr5	67928468	67928469	chunk0153_70_1	6.83133	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	67927416	67928566	-113609693	-	L1ME1	LINE	L1	-242	6202	5051	3
3046	chr5	68088007	68088008	chunk0153_79_1	37.12918	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr5	68087872	68088116	-113450143	+	MamTip3	DNA	hAT-Tip100	237	493	-7	3
3047	chr5	68134643	68134644	chunk0153_83_1	27.7557	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	68134446	68134690	-113403569	+	L4_B_Mam	LINE	RTE-X	1802	2051	-2890	3
3048	chr5	78294148	78294149	chunk0154_102_1	7.14391	AR_DHT_Control	chr5	78294133	78294241	-103244018	+	MER5B	DNA	hAT-Charlie	51	177	-1	3
3049	chr5	78855590	78855591	chunk0154_123_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	78854945	78856065	-102682194	-	L1MA5	LINE	L1	-6023	1145	6	3
3050	chr5	79035606	79035607	chunk0154_129_1	66.5056	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	79035538	79035799	-102502460	-	Chap1_Mam	DNA	hAT-Charlie	0	342	102	3
3051	chr5	79549028	79549029	chunk0154_164_1	7.24914	AR_DHT_Control	chr5	79548918	79549155	-101989104	+	L2a	LINE	L2	3157	3425	-1	3
3052	chr5	79612367	79612368	chunk0154_167_1	5.20246	AR_DHT_Control	chr5	79612335	79612399	-101925860	+	G-rich	Low_complexity	Low_complexity	1	64	0	3
3053	chr5	79709338	79709339	chunk0154_170_1	6.18774	AR_DHT_Control	chr5	79709117	79709431	-101828828	+	L1M5	LINE	L1	5490	5820	-304	3
3054	chr5	80017135	80017136	chunk0154_175_1	35.9155	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	80016976	80017315	-101520944	-	L4_B_Mam	LINE	RTE-X	-8	4982	4550	3
3055	chr5	80031771	80031772	chunk0154_178_1	4.92181	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	80031525	80031792	-101506467	-	MLT1H	LTR	ERVL-MaLR	-146	403	125	3
3056	chr5	80181860	80181861	chunk0154_187_1	75.1817	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	80181680	80182262	-101355997	+	LTR62	LTR	ERVL	76	704	-5	3
3057	chr5	80252855	80252856	chunk0154_201_1	15.52659	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	80252672	80252864	-101285395	-	MIRb	SINE	MIR	-36	232	25	3
3058	chr5	81794194	81794195	chunk0154_261_1	6.6351	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	81793682	81794270	-99743989	+	L2b	LINE	L2	2787	3375	0	3
3059	chr5	81997084	81997085	chunk0154_265_1	7.36432	AR_DHT_Control	chr5	81996962	82000000	-99538259	+	L1PA14	LINE	L1	1042	4234	-2532	3
3060	chr5	82262515	82262516	chunk0154_277_1	4.59852	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	82262409	82262574	-99275685	-	L1MC5a	LINE	L1	-16	2761	2584	3
3061	chr5	76990793	76990794	chunk0154_29_1	87.64593	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	76990787	76991311	-104546948	+	MLT2F	LTR	ERVL	1	649	-14	3
3062	chr5	83683969	83683970	chunk0154_312_1	90.56305	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr5	83683969	83684021	-97854238	+	(GGA)n	Simple_repeat	Simple_repeat	1	50	0	3
3063	chr5	84131590	84131591	chunk0154_323_1	37.0408	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	84131483	84131719	-97406540	+	MIR	SINE	MIR	1	244	-18	3
3064	chr5	84519108	84519109	chunk0154_325_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	84517312	84519415	-97018844	-	L1PA13	LINE	L1	-4326	2459	290	3
3065	chr5	85527698	85527699	chunk0154_333_1	22.2102	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	85527365	85527731	-96010528	-	MLT2B4	LTR	ERVL	-64	350	1	3
3066	chr5	87035497	87035498	chunk0154_349_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	87033673	87036244	-94502015	-	L1PBa	LINE	L1	-4215	2648	7	3
3067	chr5	87865404	87865405	chunk0154_383_1	7.48106	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	87865253	87865727	-93672532	+	MamRTE1	LINE	RTE-BovB	3146	3687	-125	3
3068	chr5	88306556	88306557	chunk0154_397_1	94.203	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	88305753	88310434	-93227825	+	L1P2	LINE	L1	3	4698	-1448	3
3069	chr5	88496870	88496871	chunk0154_399_1	9.93187	AR_DHT_Control	chr5	88496824	88497067	-93041192	-	MIRb	SINE	MIR	-15	253	17	3
3070	chr5	88652221	88652222	chunk0154_403_1	7.09019	AR_DHT_Control	chr5	88651708	88652322	-92885937	+	L2b	LINE	L2	2772	3374	-1	3
3071	chr5	77369610	77369611	chunk0154_66_1	20.65289	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	77369541	77369716	-104168543	-	MIRb	SINE	MIR	-2	260	60	3
3072	chr5	77803542	77803543	chunk0154_84_1	4.60172	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	77803418	77803566	-103734693	+	L1MEd	LINE	L1	1316	1461	-5625	3
3073	chr5	77907179	77907180	chunk0154_85_1	4.77556	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	77906940	77907227	-103631032	-	LTR33	LTR	ERVL	-236	279	3	3
3074	chr5	94367157	94367158	chunk0155_169_1	9.82619	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	94366698	94367215	-87171044	-	LTR10C	LTR	ERV1	0	591	1	3
3075	chr5	94500692	94500693	chunk0155_185_1	17.62326	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	94500075	94500703	-87037556	-	L2	LINE	L2	-424	2995	2322	3
3076	chr5	94998711	94998712	chunk0155_208_1	93.1098	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	94998598	94998885	-86539374	+	LTR51	LTR	ERV1	227	514	-157	3
3077	chr5	95410341	95410342	chunk0155_225_1	6.09694	AR_DHT_Control	chr5	95409922	95410422	-86127837	+	MLT1J	LTR	ERVL-MaLR	1	511	-1	3
3078	chr5	95727867	95727868	chunk0155_248_1	8.80746	AR_DHT_Control	chr5	95727809	95728034	-85810225	-	MLT1J2	LTR	ERVL-MaLR	-14	430	192	3
3079	chr5	95975311	95975312	chunk0155_272_1	12.99964	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	95975299	95975420	-85562839	-	MER5A	DNA	hAT-Charlie	-6	183	63	3
3080	chr5	96538948	96538949	chunk0155_309_1	11.14719	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	96538773	96538959	-84999300	-	MamGypsy2-I	LTR	Gypsy	-50	4116	3882	3
3081	chr5	96796787	96796788	chunk0155_327_1	14.4671	AR_DHT_Control	chr5	96796715	96796793	-84741466	-	MER81	DNA	hAT-Blackjack	-1	113	60	3
3082	chr5	97013326	97013327	chunk0155_346_1	135.3966	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	97013035	97013482	-84524777	+	L2b	LINE	L2	2931	3372	-3	3
3083	chr5	98180871	98180872	chunk0155_381_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	98179920	98185997	-83352262	+	L1PB2	LINE	L1	254	6491	-376	3
3084	chr5	98259603	98259604	chunk0155_382_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	98255821	98260396	-83277863	-	L1M1	LINE	L1	-2957	4608	15	3
3085	chr5	99275744	99275745	chunk0155_409_1	9.69227	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	99275041	99276336	-82261923	+	MSTB-int	LTR	ERVL-MaLR	363	1645	-6	3
3086	chr5	100700300	100700301	chunk0155_435_1	11.1716	AR_DHT_Control	chr5	100699905	100705798	-80832461	+	L1PA6	LINE	L1	367	6148	-6	3
3087	chr5	101632286	101632287	chunk0155_445_1	5.28628	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	101632018	101633651	-79904608	-	MSTA-int	LTR	ERVL-MaLR	0	1631	1	3
3088	chr5	91321560	91321561	chunk0155_57_1	4.98725	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	91321274	91321851	-90216408	-	L1PB2	LINE	L1	-773	5373	4774	3
3089	chr5	91803092	91803093	chunk0155_75_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	91802387	91803496	-89734763	+	LTR28C	LTR	ERV1	1	1129	0	3
3090	chr5	92289881	92289882	chunk0155_89_1	5.38748	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	92289290	92291573	-89246686	-	L1MC2	LINE	L1	-1095	5226	2825	3
3091	chr5	105569834	105569835	chunk0156_111_1	5.14616	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	105568608	105570149	-75968110	+	L1MB7	LINE	L1	3236	4846	-1798	3
3092	chr5	102037337	102037338	chunk0156_13_1	30.96061	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	102037278	102037526	-79500733	+	LTR82A	LTR	ERVL	90	338	-534	3
3093	chr5	106780430	106780431	chunk0156_130_1	8.83557	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	106779069	106782567	-74755692	+	L1MA3	LINE	L1	17	3620	-3945	3
3094	chr5	102217001	102217002	chunk0156_20_1	16.505	AR_DHT_Control	chr5	102216553	102217096	-79321163	+	MER67C	LTR	ERV1	9	514	0	3
3095	chr5	108876383	108876384	chunk0156_250_1	8.27376	AR_DHT_Control	chr5	108876110	108876653	-72661606	+	Cheshire	DNA	hAT-Charlie	1	549	-1871	3
3096	chr5	109928067	109928068	chunk0156_283_1	10.5451	AR_DHT_Control	chr5	109927766	109928075	-71610184	-	MLT1A0	LTR	ERVL-MaLR	-50	315	1	3
3097	chr5	111920923	111920924	chunk0156_347_1	4.88663	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	111920452	111921129	-69617130	-	MER61E	LTR	ERV1	-7	772	28	3
3098	chr5	112330070	112330071	chunk0156_354_1	3.58429	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	112329924	112330102	-69208157	+	MIRc	SINE	MIR	84	259	-9	3
3099	chr5	112691923	112691924	chunk0156_368_1	5.82105	AR_DHT_Control	chr5	112691746	112692518	-68845741	+	LTR41	LTR	ERVL	1	767	-1	3
3100	chr5	112762977	112762978	chunk0156_370_1	53.1064	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	112762846	112763012	-68775247	-	MARNA	DNA	TcMar-Mariner	-239	347	168	3
3101	chr5	112963436	112963437	chunk0156_385_1	69.5015	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	112963038	112963509	-68574750	+	MLT1D	LTR	ERVL-MaLR	1	435	-70	3
3102	chr5	113323232	113323233	chunk0156_393_1	6.04605	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	113322830	113323351	-68214908	+	MLT1F	LTR	ERVL-MaLR	7	548	0	3
3103	chr5	114188521	114188522	chunk0156_407_1	15.96345	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	114188454	114189089	-67349170	+	L1M5	LINE	L1	4121	4797	-1349	3
3104	chr5	114346369	114346370	chunk0156_418_1	241.0726	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	114346349	114347370	-67190889	+	L1MC4a	LINE	L1	6329	7378	-504	3
3105	chr5	114617993	114617994	chunk0156_434_1	5.82105	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	114617214	114618055	-66920204	+	L1MC1	LINE	L1	5052	5915	-418	3
3106	chr5	114730766	114730767	chunk0156_441_1	12.1004	AR_DHT_Control	chr5	114730549	114730776	-66807483	-	L2c	LINE	L2	-185	3202	2979	3
3107	chr5	103553527	103553528	chunk0156_69_1	56.8447	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr5	103553138	103553802	-77984457	+	L1ME3C	LINE	L1	5129	5833	-290	3
3108	chr5	104652898	104652899	chunk0156_89_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	104652112	104655549	-76882710	+	L1MA4A	LINE	L1	728	4306	-3256	3
3109	chr5	116882778	116882779	chunk0157_114_1	159.3123	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	116882684	116882881	-64655378	-	L2a	LINE	L2	0	3426	3245	3
3110	chr5	117290392	117290393	chunk0157_129_1	12.5708	AR_DHT_Control	chr5	117289999	117290530	-64247729	+	L4_A_Mam	LINE	RTE-X	3732	4255	-735	3
3111	chr5	117830326	117830327	chunk0157_154_1	6.48643	AR_DHT_Control	chr5	117827134	117830344	-63707915	-	L1PA8A	LINE	L1	-3230	3101	4	3
3112	chr5	118906085	118906086	chunk0157_192_1	17.61025	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	118905858	118906856	-62631403	+	L1ME1	LINE	L1	5129	6154	-25	3
3113	chr5	119050831	119050832	chunk0157_202_1	19.84522	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	119050705	119050864	-62487395	+	LTR26B	LTR	ERV1	372	531	0	3
3114	chr5	115497581	115497582	chunk0157_21_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	115497541	115497664	-66040595	-	LTR67B	LTR	ERVL	-472	148	24	3
3115	chr5	119290650	119290651	chunk0157_213_1	5.95444	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	119290158	119290684	-62247575	-	MLT1F	LTR	ERVL-MaLR	0	548	7	3
3116	chr5	119386380	119386381	chunk0157_222_1	10.92653	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	119386171	119386499	-62151760	-	LTR37A	LTR	ERV1	0	426	25	3
3117	chr5	119446685	119446686	chunk0157_228_1	5.18995	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	119446129	119447266	-62090993	+	HERVIP10FH-int	LTR	ERV1	1975	3119	-1983	3
3118	chr5	119876798	119876799	chunk0157_252_1	19.06066	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	119876772	119876956	-61661303	-	MIRb	SINE	MIR	-42	226	38	3
3119	chr5	120084321	120084322	chunk0157_266_1	153.221	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	120084298	120084838	-61453421	+	MLT2B1	LTR	ERVL	1	549	-7	3
3120	chr5	120439773	120439774	chunk0157_277_1	20.6373	AR_DHT_Control	chr5	120439574	120439886	-61098373	+	MER57C1	LTR	ERV1	1	407	-4	3
3121	chr5	120575465	120575466	chunk0157_278_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	120575354	120575879	-60962380	+	L1M2	LINE	L1	3687	4216	-1927	3
3122	chr5	115558744	115558745	chunk0157_28_1	193.1326	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr5	115558694	115558803	-65979456	+	MamRTE1	LINE	RTE-BovB	171	276	-3536	3
3123	chr5	120661195	120661196	chunk0157_283_1	7.76985	AR_DHT_Control	chr5	120661160	120661627	-60876632	-	HAL1b	LINE	L1	-797	1624	1126	3
3124	chr5	115626296	115626297	chunk0157_31_1	4.33257	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	115626286	115626387	-65911872	-	AluSz6	SINE	Alu	0	312	213	3
3125	chr5	121737172	121737173	chunk0157_311_1	190.3728	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	121736802	121737277	-59800982	-	Tigger17c	DNA	TcMar-Tigger	-643	545	101	3
3126	chr5	122494054	122494055	chunk0157_339_1	16.9357	AR_DHT_Control	chr5	122493926	122494188	-59044071	+	L2b	LINE	L2	3108	3375	0	3
3127	chr5	122858535	122858536	chunk0157_347_1	68.8589	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	122858467	122858826	-58679433	-	L1MC5	LINE	L1	-2240	7064	6705	3
3128	chr5	122991361	122991362	chunk0157_350_1	10.0841	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	122991361	122991417	-58546842	+	Plat_L3	LINE	CR1	1162	1219	-2367	3
3129	chr5	123313694	123313695	chunk0157_356_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	123311971	123314164	-58224095	-	L1PA10	LINE	L1	-4749	3414	2	3
3130	chr5	124023230	124023231	chunk0157_387_1	18.52527	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	124022933	124023329	-57514930	-	Charlie7	DNA	hAT-Charlie	-1923	689	289	3
3131	chr5	124121909	124121910	chunk0157_392_1	9.90633	AR_DHT_Control	chr5	124121692	124122044	-57416215	+	LTR107_Mam	LTR	LTR	5	389	-181	3
3132	chr5	124932990	124932991	chunk0157_447_1	34.44793	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	124932877	124933230	-56605029	-	ERV3-16A3_I-int	LTR	ERVL	-2956	2040	1682	3
3133	chr5	115979130	115979131	chunk0157_47_1	6.45888	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	115978370	115979666	-65558593	-	LTR78	LTR	ERV1	0	1304	1	3
3134	chr5	116631233	116631234	chunk0157_90_1	11.31512	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	116631120	116631445	-64906814	+	L1ME3G	LINE	L1	320	667	-257	3
3135	chr5	126882281	126882282	chunk0158_112_1	113.0867	Merged_Lncap_AR_Veh;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	126882278	126882342	-54655917	-	Mam_R4	LINE	Dong-R4	-355	3454	3391	3
3136	chr5	125229894	125229895	chunk0158_12_1	8.90544	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	125229417	125230367	-56307892	-	L1MC3	LINE	L1	-7	7778	6808	3
3137	chr5	127197805	127197806	chunk0158_131_1	64.2557	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	127197142	127203292	-54334967	+	L1PA6	LINE	L1	174	6326	-1	3
3138	chr5	125244124	125244125	chunk0158_14_1	37.52763	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	125241500	125245186	-56293073	-	L1PA15	LINE	L1	-132	6560	2878	3
3139	chr5	127731287	127731288	chunk0158_175_1	6.48643	AR_DHT_Control	chr5	127729197	127733007	-53805252	+	L1PA10	LINE	L1	2513	6342	-11	3
3140	chr5	128176504	128176505	chunk0158_207_1	8.18895	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	128176496	128176557	-53361702	+	A-rich	Low_complexity	Low_complexity	1	63	0	3
3141	chr5	131303763	131303764	chunk0158_269_1	18.89281	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	131303665	131303829	-50234430	-	L3	LINE	CR1	-152	3947	3767	3
3142	chr5	131368377	131368378	chunk0158_272_1	35.7719	AR_DHT_Control	chr5	131368276	131368582	-50169677	-	L1ME3Cz	LINE	L1	-1252	4894	4578	3
3143	chr5	132808583	132808584	chunk0158_320_1	30.09809	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr5	132808556	132808641	-48729618	+	MIRc	SINE	MIR	40	124	-144	3
3144	chr5	134592007	134592008	chunk0158_391_1	6.6833	AR_DHT_Control	chr5	134591947	134592066	-46946193	+	MIRc	SINE	MIR	98	216	-52	3
3145	chr5	134632435	134632436	chunk0158_396_1	6.13992	AR_DHT_Control	chr5	134632410	134632473	-46905786	-	MIR3	SINE	MIR	-61	147	86	3
3146	chr5	126610097	126610098	chunk0158_93_1	28.93326	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	126610039	126610203	-54928056	+	MER106B	DNA	hAT-Charlie	899	1058	-1	3
3147	chr5	138958807	138958808	chunk0159_125_1	21.2205	AR_DHT_Control	chr5	138958794	138959166	-42579093	-	L1MC4	LINE	L1	-852	7190	6819	3
3148	chr5	139452405	139452406	chunk0159_161_1	5.69226	AR_DHT_Control	chr5	139451599	139452652	-42085607	+	(TG)n	Simple_repeat	Simple_repeat	1	1077	0	3
3149	chr5	140619159	140619160	chunk0159_209_1	21.03304	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	140618724	140619241	-40919018	+	L1MC1	LINE	L1	4899	5406	-927	3
3150	chr5	141904577	141904578	chunk0159_247_1	12.5159	AR_DHT_Control	chr5	141904544	141904703	-39633556	+	L2c	LINE	L2	3003	3174	-213	3
3151	chr5	142937676	142937677	chunk0159_300_1	71.38849	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	142936146	142938264	-38599995	+	L1MD2	LINE	L1	4248	6346	-13	3
3152	chr5	143063331	143063332	chunk0159_306_1	10.1301	AR_DHT_Control	chr5	143063150	143063505	-38474754	+	L2b	LINE	L2	2564	2911	-508	3
3153	chr5	144187975	144187976	chunk0159_345_1	6.75651	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	144187864	144188200	-37350059	+	AmnSINE1	SINE	5S-Deu-L2	1	374	-201	3
3154	chr5	144377318	144377319	chunk0159_351_1	14.99993	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	144377274	144377549	-37160710	-	MER102c	DNA	hAT-Charlie	-43	288	5	3
3155	chr5	145984144	145984145	chunk0159_374_1	16.71124	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	145984110	145984198	-35554061	+	L2a	LINE	L2	3278	3387	0	3
3156	chr5	148909257	148909258	chunk0159_460_1	6.98158	AR_DHT_Control	chr5	148909115	148909689	-32628570	+	L1ME1	LINE	L1	5579	6176	-3	3
3157	chr5	138036394	138036395	chunk0159_94_1	13.0642	AR_DHT_Control	chr5	138036321	138036620	-43501639	-	LTR78	LTR	ERV1	-768	536	195	3
3158	chr5	151610458	151610459	chunk0160_152_1	7.87199	AR_DHT_Control	chr5	151610452	151610819	-29927440	-	Charlie5	DNA	hAT-Charlie	0	2624	2259	3
3159	chr5	151709559	151709560	chunk0160_155_1	8.21385	AR_DHT_Control	chr5	151709032	151709668	-29828591	+	LTR9D	LTR	ERV1	1	645	0	3
3160	chr5	153952782	153952783	chunk0160_177_1	5.6425	AR_DHT_Control	chr5	153952674	153952871	-27585388	-	MIRb	SINE	MIR	-6	262	36	3
3161	chr5	154504409	154504410	chunk0160_189_1	13.64524	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	154504398	154504597	-27033662	+	L1ME3G	LINE	L1	601	804	-120	3
3162	chr5	155618408	155618409	chunk0160_231_1	6.98682	AR_DHT_Control	chr5	155618274	155618448	-25919811	-	MIR	SINE	MIR	-10	252	54	3
3163	chr5	156778196	156778197	chunk0160_253_1	7.53988	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	156778164	156778316	-24759943	-	MIRc	SINE	MIR	-48	220	55	3
3164	chr5	157129519	157129520	chunk0160_265_1	5.33775	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	157129516	157129690	-24408569	-	AluSp	SINE	Alu	-20	293	120	3
3165	chr5	160161897	160161898	chunk0160_349_1	30.5121	AR_DHT_Control	chr5	160161844	160162003	-21376256	-	L1M1	LINE	L1	-551	5749	5588	3
3166	chr5	161172458	161172459	chunk0160_367_1	163.31407	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	161171921	161172820	-20365439	-	L1MC1	LINE	L1	-226	6107	5182	3
3167	chr5	163427176	163427177	chunk0160_393_1	10.4755	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	163425954	163428316	-18109943	+	L1PB1	LINE	L1	3821	6150	-1	3
3168	chr5	163521279	163521280	chunk0160_401_1	131.1244	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	163521265	163521374	-18016885	-	L1MC4	LINE	L1	-1262	6620	6500	3
3169	chr5	164053289	164053290	chunk0160_413_1	9.01771	AR_DHT_Control	chr5	164053287	164053391	-17484868	-	L2a	LINE	L2	-4	3422	3311	3
3170	chr5	149614223	149614224	chunk0160_52_1	63.9334	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	149614062	149614420	-31923839	-	L1ME3G	LINE	L1	-359	565	202	3
3171	chr5	150263431	150263432	chunk0160_94_1	5.40372	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	150263331	150263682	-31274577	+	(AC)n	Simple_repeat	Simple_repeat	1	354	0	3
3172	chr5	169833829	169833830	chunk0161_181_1	12.2633	AR_DHT_Control	chr5	169833613	169833957	-11704302	+	HAL1	LINE	L1	441	792	-1715	3
3173	chr5	169939595	169939596	chunk0161_187_1	16.2169	AR_DHT_Control	chr5	169939203	169939681	-11598578	-	Tigger3b	DNA	TcMar-Tigger	-642	589	74	3
3174	chr5	165754079	165754080	chunk0161_21_1	17.5189	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	165754043	165754157	-15784102	-	MIRc	SINE	MIR	-10	258	142	3
3175	chr5	171188201	171188202	chunk0161_231_1	7.09019	AR_DHT_Control	chr5	171188078	171188239	-10350020	+	L3	LINE	CR1	3635	3790	-309	3
3176	chr5	171509802	171509803	chunk0161_239_1	6.44773	AR_DHT_Control	chr5	171509545	171509879	-10028380	+	L2	LINE	L2	2357	2708	-711	3
3177	chr5	165801507	165801508	chunk0161_30_1	7.42871	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	165801290	165802536	-15735723	+	L1MB3	LINE	L1	5125	6411	-8	3
3178	chr5	173364935	173364936	chunk0161_302_1	11.3519	AR_DHT_Control	chr5	173364901	173365121	-8173138	+	MER58A	DNA	hAT-Charlie	2	224	0	3
3179	chr5	173454793	173454794	chunk0161_308_1	30.94522	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	173454482	173455036	-8083223	+	MLT1F1	LTR	ERVL-MaLR	27	569	0	3
3180	chr5	173567768	173567769	chunk0161_320_1	34.1104	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	173567612	173567898	-7970361	-	MER20B	DNA	hAT-Charlie	-302	481	190	3
3181	chr5	173810903	173810904	chunk0161_330_1	6.42872	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	173810547	173811575	-7726684	+	(TGGTGA)n	Simple_repeat	Simple_repeat	1	1042	0	3
3182	chr5	174534396	174534397	chunk0161_350_1	4.70267	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	174534346	174534760	-7003499	+	LTR16C	LTR	ERVL	1	528	-10	3
3183	chr5	175107186	175107187	chunk0161_357_1	11.4177	AR_DHT_Control	chr5	175106435	175107543	-6430716	-	MER21-int	LTR	ERVL	-875	3316	2206	3
3184	chr5	165828830	165828831	chunk0161_36_1	13.2304	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	165828043	165829478	-15708781	-	L1MEf	LINE	L1	-2839	3480	1943	3
3185	chr5	176695226	176695227	chunk0161_377_1	6.5005	AR_DHT_Control	chr5	176694965	176695400	-4842859	-	MLT1J	LTR	ERVL-MaLR	-10	502	1	3
3186	chr5	177013967	177013968	chunk0161_394_1	6.48643	AR_DHT_Control	chr5	177013708	177014047	-4524212	-	MER68	LTR	ERVL	-77	486	132	3
3187	chr5	177158036	177158037	chunk0161_396_1	7.36432	AR_DHT_Control	chr5	177157679	177158237	-4380022	-	L1MB7	LINE	L1	-93	6091	5528	3
3188	chr5	177426652	177426653	chunk0161_406_1	4.87879	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	177426627	177426656	-4111603	+	G-rich	Low_complexity	Low_complexity	1	29	0	3
3189	chr5	177455371	177455372	chunk0161_408_1	6.90279	AR_DHT_Control	chr5	177455322	177455452	-4082807	+	(GCGCAC)n	Simple_repeat	Simple_repeat	1	131	0	3
3190	chr5	177599930	177599931	chunk0161_413_1	5.98896	AR_DHT_Control	chr5	177599871	177599951	-3938308	+	MIR3	SINE	MIR	30	128	-80	3
3191	chr5	178379406	178379407	chunk0161_426_1	9.61425	AR_DHT_Control	chr5	178379334	178379565	-3158694	+	L1ME3G	LINE	L1	672	908	-16	3
3192	chr5	165920572	165920573	chunk0161_43_1	25.0939	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	165920373	165920828	-15617431	-	L1M7	LINE	L1	-4780	1531	1018	3
3193	chr5	166379034	166379035	chunk0161_61_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	166378556	166380010	-15158249	-	MER52A	LTR	ERV1	-150	1605	1	3
3194	chr6	375000	375001	chunk0162_10_1	6.86162	AR_DHT_Control	chr6	374602	375302	-170430677	+	L1MC4a	LINE	L1	6810	7569	-313	3
3195	chr6	2989697	2989698	chunk0162_131_1	4.54685	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	2989586	2990082	-167815897	-	LTR73	LTR	ERV1	-21	551	1	3
3196	chr6	3219833	3219834	chunk0162_142_1	10.6722	AR_DHT_Control	chr6	3219767	3219898	-167586081	+	MIR3	SINE	MIR	74	208	0	3
3197	chr6	3509305	3509306	chunk0162_165_1	12.5132	AR_DHT_Control	chr6	3509132	3509509	-167296470	+	MLT1A1	LTR	ERVL-MaLR	1	408	0	3
3198	chr6	3677606	3677607	chunk0162_176_1	12.1979	AR_DHT_Control	chr6	3672187	3678310	-167127669	-	L1PA6	LINE	L1	0	6327	177	3
3199	chr6	3803944	3803945	chunk0162_185_1	12.8531	AR_DHT_Control	chr6	3803862	3803997	-167001982	-	MARNA	DNA	TcMar-Mariner	-387	199	62	3
3200	chr6	3968568	3968569	chunk0162_199_1	14.2738	AR_DHT_Control	chr6	3968455	3968891	-166837088	+	MER57B1	LTR	ERV1	1	401	0	3
3201	chr6	4982202	4982203	chunk0162_247_1	12.5882	AR_DHT_Control	chr6	4981689	4982230	-165823749	-	MER34B	LTR	ERV1	0	565	5	3
3202	chr6	5134049	5134050	chunk0162_252_1	12.7844	AR_DHT_Control	chr6	5133608	5134179	-165671800	-	L1MB5	LINE	L1	-13	6161	5567	3
3203	chr6	5293212	5293213	chunk0162_263_1	6.3126	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	5292260	5293326	-165512653	-	L2c	LINE	L2	-567	2852	1754	3
3204	chr6	5414569	5414570	chunk0162_266_1	14.41719	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	5414253	5414811	-165391168	-	L1ME1	LINE	L1	-15	6337	5775	3
3205	chr6	6593966	6593967	chunk0162_306_1	20.0159	AR_DHT_Control	chr6	6593615	6594090	-164211889	-	L4_B_Mam	LINE	RTE-X	-177	4813	4221	3
3206	chr6	1053827	1053828	chunk0162_37_1	13.55092	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	1053541	1054327	-169751652	+	(ACATAG)n	Simple_repeat	Simple_repeat	1	794	0	3
3207	chr5	179519739	179519740	chunk0162_388_1	7.36432	AR_DHT_Control	chr5	179519668	179520224	-2018035	+	L1M4a2	LINE	L1	1267	1907	-1451	3
3208	chr5	180048008	180048009	chunk0162_418_1	17.63731	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	180047964	180048371	-1489888	+	L4_A_Mam	LINE	RTE-X	175	585	-4405	3
3209	chr6	1338072	1338073	chunk0162_55_1	5.6503	AR_DHT_Control	chr6	1337747	1338092	-169467887	+	L3	LINE	CR1	3204	3545	-554	3
3210	chr6	10332404	10332405	chunk0163_125_1	16.843	AR_DHT_Control	chr6	10332359	10332451	-160473528	+	AluSx3	SINE	Alu	210	300	-11	3
3211	chr6	10711142	10711143	chunk0163_141_1	7.36432	AR_DHT_Control	chr6	10710680	10711500	-160094479	-	L1MD1	LINE	L1	-19	6223	5282	3
3212	chr6	11335465	11335466	chunk0163_182_1	28.55125	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	11334570	11335847	-159470132	+	HSMAR1	DNA	TcMar-Mariner	1	1287	0	3
3213	chr6	11491401	11491402	chunk0163_185_1	4.53037	AR_DHT_Control	chr6	11490990	11491866	-159314113	+	(GT)n	Simple_repeat	Simple_repeat	1	915	0	3
3214	chr6	11686267	11686268	chunk0163_193_1	30.3656	AR_DHT_Control	chr6	11686224	11686388	-159119591	-	LTR50	LTR	ERVL	-476	319	128	3
3215	chr6	11856449	11856450	chunk0163_203_1	8.63095	AR_DHT_Control	chr6	11855739	11856594	-158949385	+	HAL1ME	LINE	L1	1366	2267	-198	3
3216	chr6	13310165	13310166	chunk0163_268_1	13.6482	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	13309825	13310355	-157495624	+	L1MC5	LINE	L1	6611	7145	-2159	3
3217	chr6	14093090	14093091	chunk0163_293_1	81.1541	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	14093087	14093144	-156712835	-	L2c	LINE	L2	-73	3314	3261	3
3218	chr6	14459276	14459277	chunk0163_304_1	110.6156	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	14458294	14459375	-156346604	-	L1ME3A	LINE	L1	-2	6171	5042	3
3219	chr6	15453803	15453804	chunk0163_347_1	178.0242	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	15453623	15453986	-155351993	-	L1MC4	LINE	L1	-962	7080	6711	3
3220	chr6	8462426	8462427	chunk0163_39_1	76.658	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	8461463	8462955	-162343024	-	L1PA16	LINE	L1	-4399	2235	714	3
3221	chr6	9208410	9208411	chunk0163_71_1	25.2123	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	9208248	9209712	-161596267	+	ERVL-E-int	LTR	ERVL	4116	5712	-2	3
3222	chr6	20454314	20454315	chunk0164_101_1	5.6503	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	20454144	20454324	-150351655	+	MER5A	DNA	hAT-Charlie	1	186	-3	3
3223	chr6	20812977	20812978	chunk0164_119_1	90.0961	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	20812430	20813088	-149992891	-	L1ME1	LINE	L1	-68	6111	5385	3
3224	chr6	20821139	20821140	chunk0164_123_1	4.84918	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	20820735	20821333	-149984646	-	L2a	LINE	L2	-1	3425	2698	3
3225	chr6	21360750	21360751	chunk0164_145_1	7.19831	AR_DHT_Control	chr6	21358930	21361143	-149444836	-	HERVL32-int	LTR	ERVL	-1711	3535	1274	3
3226	chr6	22001497	22001498	chunk0164_180_1	58.44646	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	22001496	22001731	-148804248	-	L3	LINE	CR1	-1227	2872	2656	3
3227	chr6	22389936	22389937	chunk0164_197_1	9.63462	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	22384026	22390396	-148415583	-	L1PA8A	LINE	L1	-5	6441	1	3
3228	chr6	22928736	22928737	chunk0164_222_1	6.83133	AR_DHT_Control	chr6	22928723	22929146	-147876833	-	LTR33	LTR	ERVL	-57	458	1	3
3229	chr6	23074011	23074012	chunk0164_230_1	15.6556	AR_DHT_Control	chr6	23073540	23074091	-147731888	-	L2a	LINE	L2	-1625	1794	1209	3
3230	chr6	23191637	23191638	chunk0164_233_1	30.7964	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	23191424	23191815	-147614164	-	L1MCc	LINE	L1	-5244	1793	1168	3
3231	chr6	23263231	23263232	chunk0164_236_1	9.21264	AR_DHT_Control	chr6	23262784	23263278	-147542701	-	MLT2B4	LTR	ERVL	0	556	1	3
3232	chr6	24990968	24990969	chunk0164_309_1	6.7814	AR_DHT_Control	chr6	24990660	24991472	-145814507	+	LTR102_Mam	LTR	ERVL	3	851	0	3
3233	chr6	25659860	25659861	chunk0164_368_1	74.5433	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	25659744	25659861	-145146118	-	MER70B	LTR	ERVL	-345	233	115	3
3234	chr6	26745597	26745598	chunk0164_410_1	8.27376	AR_DHT_Control	chr6	26744674	26745634	-144060345	+	LTR5_Hs	LTR	ERVK	1	968	0	3
3235	chr6	27020435	27020436	chunk0164_413_1	9.62915	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	27020345	27020439	-143785540	+	tRNA-Ile-ATA	tRNA	tRNA	1	74	-3	3
3236	chr6	28283058	28283059	chunk0164_450_1	6.49378	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	28282925	28283366	-142522613	-	MLT1H2	LTR	ERVL-MaLR	-2	487	35	3
3237	chr6	19796578	19796579	chunk0164_77_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	19795907	19797478	-151008501	+	L1MD2	LINE	L1	108	2009	-4624	3
3238	chr6	28692753	28692754	chunk0165_10_1	5.85263	AR_DHT_Control	chr6	28692010	28692958	-142113021	+	LTR5_Hs	LTR	ERVK	1	968	0	3
3239	chr6	33974146	33974147	chunk0165_165_1	8.16452	AR_DHT_Control	chr6	33973595	33974189	-136831790	+	L1ME1	LINE	L1	5066	5634	-545	3
3240	chr6	37109931	37109932	chunk0165_316_1	71.15344	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	37109843	37110107	-133695872	+	MIRc	SINE	MIR	7	268	0	3
3241	chr6	37244599	37244600	chunk0165_326_1	7.53305	AR_DHT_Control	chr6	37244569	37244611	-133561368	-	MLT1H	LTR	ERVL-MaLR	-23	539	499	3
3242	chr6	37966961	37966962	chunk0165_347_1	75.5111	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	37966630	37967186	-132838793	-	L1MC4	LINE	L1	-151	7891	7224	3
3243	chr6	38803417	38803418	chunk0165_394_1	65.5768	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	38803361	38803603	-132002376	-	MER68	LTR	ERVL	-315	248	6	3
3244	chr6	39100143	39100144	chunk0165_415_1	13.1677	AR_DHT_Control	chr6	39099702	39100299	-131705680	+	L1ME4b	LINE	L1	1	641	-251	3
3245	chr6	39451129	39451130	chunk0165_419_1	10.4518	AR_DHT_Control	chr6	39451115	39451397	-131354582	-	L2a	LINE	L2	0	3426	3119	3
3246	chr6	39965116	39965117	chunk0165_434_1	32.5131	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	39964949	39965915	-130840064	+	L1MEd	LINE	L1	2115	3153	-2993	3
3247	chr6	40962256	40962257	chunk0165_457_1	7.57442	AR_DHT_Control	chr6	40962198	40962291	-129843688	+	MIR3	SINE	MIR	111	206	-2	3
3248	chr6	30213987	30213988	chunk0165_49_1	4.30231	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	30213981	30214046	-140591933	-	MIRc	SINE	MIR	-114	154	90	3
3249	chr6	31360434	31360435	chunk0165_83_1	10.1791	AR_DHT_Control	chr6	31360363	31360452	-139445527	-	L1MD	LINE	L1	-1969	4177	4089	3
3250	chr6	31424165	31424166	chunk0165_84_1	6.48643	AR_DHT_Control	chr6	31424093	31424269	-139381710	-	MER41D	LTR	ERV1	-336	221	47	3
3251	chr6	43846787	43846788	chunk0166_102_1	26.9663	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	43845790	43846940	-126959039	-	Tigger3b	DNA	TcMar-Tigger	-1	1230	1	3
3252	chr6	44721241	44721242	chunk0166_130_1	44.9286	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	44721240	44721321	-126084658	+	UCON37	Unknown	Unknown	2	95	-48	3
3253	chr6	44790018	44790019	chunk0166_133_1	8.02791	AR_DHT_Control	chr6	44789949	44790028	-126015951	-	UCON26	Unknown	Unknown	-175	168	91	3
3254	chr6	41330298	41330299	chunk0166_2_1	15.7243	AR_DHT_Control	chr6	41330205	41330893	-129475086	-	L1ME3G	LINE	L1	-63	1115	421	3
3255	chr6	46645535	46645536	chunk0166_202_1	15.35686	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	46644547	46647235	-124158744	-	L1MD1	LINE	L1	-486	5756	2904	3
3256	chr6	46988566	46988567	chunk0166_228_1	5.59693	AR_DHT_Control	chr6	46988359	46988578	-123817401	-	MIRb	SINE	MIR	-17	251	3	3
3257	chr6	47270291	47270292	chunk0166_244_1	9.68961	AR_DHT_Control	chr6	47270102	47275669	-123530310	+	L1PA6	LINE	L1	590	6154	0	3
3258	chr6	47622241	47622242	chunk0166_258_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	47621873	47622862	-123183117	-	L1PB1	LINE	L1	-5614	998	5	3
3259	chr6	41338832	41338833	chunk0166_3_1	10.8162	AR_DHT_Control	chr6	41337149	41339057	-129466922	-	Charlie10	DNA	hAT-Charlie	-50	2772	748	3
3260	chr6	51029823	51029824	chunk0166_342_1	7.36432	AR_DHT_Control	chr6	51029417	51029915	-119776064	-	L1ME4c	LINE	L1	-31	799	235	3
3261	chr6	51703073	51703074	chunk0166_382_1	98.504	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	51702954	51703158	-119102821	-	L2c	LINE	L2	-38	3349	3139	3
3262	chr6	53469394	53469395	chunk0167_10_1	117.89154	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	53469147	53474826	-117331153	-	L1MA3	LINE	L1	-1828	5737	319	3
3263	chr6	57549320	57549321	chunk0167_116_1	11.1999	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	57549219	57549410	-113256569	-	MIRb	SINE	MIR	-39	229	18	3
3264	chr6	60870088	60870089	chunk0167_121_1	8.71496	AR_DHT_Control	chr6	60869887	60870164	-109935815	-	L2a	LINE	L2	-160	3266	2985	3
3265	chr6	62400859	62400860	chunk0167_142_1	37.29352	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	62397980	62401293	-108404686	-	L1MA3	LINE	L1	-2824	4741	1323	3
3266	chr6	63448181	63448182	chunk0167_171_1	12.1886	AR_DHT_Control	chr6	63448033	63448194	-107357785	+	AmnSINE1	SINE	5S-Deu-L2	407	571	-4	3
3267	chr6	64067749	64067750	chunk0167_185_1	40.6244	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	64067523	64067783	-106738196	+	MER44A	DNA	TcMar-Tigger	62	339	0	3
3268	chr6	64465443	64465444	chunk0167_194_1	22.43447	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	64464959	64466870	-106339109	+	L1MA8	LINE	L1	4354	6268	-23	3
3269	chr6	53394309	53394310	chunk0167_2_1	92.3816	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr6	53394302	53394418	-117411561	-	L1ME4a	LINE	L1	-139	5985	5840	3
3270	chr6	53695774	53695775	chunk0167_20_1	227.8143	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr6	53695688	53695837	-117110142	+	L2a	LINE	L2	3265	3426	0	3
3271	chr6	64932687	64932688	chunk0167_204_1	6.98538	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	64931956	64933277	-105872702	+	L1MB7	LINE	L1	17	1361	-6156	3
3272	chr6	68145132	68145133	chunk0167_251_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	68143325	68146088	-102659891	-	L1M1	LINE	L1	-4679	2886	107	3
3273	chr6	69792643	69792644	chunk0167_267_1	31.8486	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	69792588	69792697	-101013282	+	Charlie1b	DNA	hAT-Charlie	280	399	-124	3
3274	chr6	72077325	72077326	chunk0167_315_1	32.0411	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	72076754	72077449	-98728530	+	L2a	LINE	L2	2631	3426	0	3
3275	chr6	75436940	75436941	chunk0167_417_1	54.2593	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	75436793	75437002	-95368977	-	MER63A	DNA	hAT-Blackjack	-1	209	1	3
3276	chr6	75747429	75747430	chunk0167_431_1	122.00431	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	75747386	75747735	-95058244	-	L2c	LINE	L2	-486	2933	2566	3
3277	chr6	75879343	75879344	chunk0167_443_1	9.78454	AR_DHT_Control	chr6	75879244	75879554	-94926425	-	AluJb	SINE	Alu	-11	301	3	3
3278	chr6	80172020	80172021	chunk0168_101_1	5.6425	AR_DHT_Control	chr6	80171971	80172239	-90633740	-	L1ME2z	LINE	L1	-388	6056	5783	3
3279	chr6	81898986	81898987	chunk0168_116_1	7.72121	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	81898603	81899268	-88906711	-	Charlie1a	DNA	hAT-Charlie	0	1455	658	3
3280	chr6	82178995	82178996	chunk0168_127_1	28.6059	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	82178523	82179491	-88626488	-	L2b	LINE	L2	0	3387	2324	3
3281	chr6	85580747	85580748	chunk0168_201_1	6.49378	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	85579340	85582387	-85223592	+	L1M1	LINE	L1	12	3016	-4549	3
3282	chr6	85908341	85908342	chunk0168_212_1	75.8496	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	85903035	85909164	-84896815	-	L1PA7	LINE	L1	-5	6149	4	3
3283	chr6	86234077	86234078	chunk0168_219_1	6.04605	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	86232016	86234154	-84571825	-	L1MA2	LINE	L1	-4851	2714	510	3
3284	chr6	88797082	88797083	chunk0168_250_1	32.4185	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	88797002	88797124	-82008855	+	L1M5	LINE	L1	4532	4655	-1491	3
3285	chr6	91373413	91373414	chunk0168_297_1	10.1809	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	91371398	91374669	-79431310	-	L1PA7	LINE	L1	-3	6466	3023	3
3286	chr6	92421561	92421562	chunk0168_320_1	9.39801	AR_DHT_Control	chr6	92420759	92424537	-78381442	+	L1PA5	LINE	L1	1	3779	-2367	3
3287	chr6	93945845	93945846	chunk0168_380_1	24.8742	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	93945685	93945874	-76860105	+	MER5B	DNA	hAT-Charlie	1	178	0	3
3288	chr6	95366504	95366505	chunk0168_416_1	7.36432	AR_DHT_Control	chr6	95365230	95366874	-75439105	-	MSTB-int	LTR	ERVL-MaLR	0	1651	1	3
3289	chr6	95367957	95367958	chunk0168_417_1	7.48058	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	95367931	95368396	-75437583	+	MLT1D	LTR	ERVL-MaLR	1	474	-31	3
3290	chr6	95780962	95780963	chunk0168_443_1	76.6676	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	95779679	95781144	-75024835	-	L1MC4	LINE	L1	-3660	2555	849	3
3291	chr6	95805306	95805307	chunk0168_444_1	5.0408	AR_DHT_Control	chr6	95805292	95805314	-75000665	+	(GT)n	Simple_repeat	Simple_repeat	1	23	0	3
3292	chr6	95951657	95951658	chunk0168_455_1	38.2927	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	95951472	95951838	-74854141	-	L2a	LINE	L2	-575	2844	2472	3
3293	chr6	78673603	78673604	chunk0168_51_1	30.9641	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	78673388	78673720	-92132259	-	L1PB4	LINE	L1	-5	6151	5825	3
3294	chr6	79113946	79113947	chunk0168_59_1	8.27376	AR_DHT_Control	chr6	79113757	79114314	-91691665	+	HAL1	LINE	L1	2	569	-1938	3
3295	chr6	79221919	79221920	chunk0168_62_1	6.48643	AR_DHT_Control	chr6	79221906	79221939	-91584040	+	(GTACAT)n	Simple_repeat	Simple_repeat	1	33	0	3
3296	chr6	79325847	79325848	chunk0168_65_1	57.5833	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	79325778	79325914	-91480065	-	L1MD	LINE	L1	-3728	2418	2282	3
3297	chr6	79663469	79663470	chunk0168_75_1	25.64004	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	79658145	79664304	-91141675	-	L1PA6	LINE	L1	0	6154	1	3
3298	chr6	79819315	79819316	chunk0168_81_1	213.6735	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	79819118	79819747	-90986232	+	Tigger17a	DNA	TcMar-Tigger	1	654	0	3
3299	chr6	79878427	79878428	chunk0168_87_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	79878034	79879562	-90926417	+	L1MA2	LINE	L1	21	1752	-5813	3
3300	chr6	80090471	80090472	chunk0168_99_1	21.24682	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	80090429	80090545	-90715434	-	MIR3	SINE	MIR	0	208	95	3
3301	chr6	101039859	101039860	chunk0169_125_1	4.55696	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	101038863	101040795	-69765184	-	L1ME1	LINE	L1	-3	6176	4138	3
3302	chr6	101092338	101092339	chunk0169_129_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	101087682	101092852	-69713127	-	L1M2	LINE	L1	-1478	6084	453	3
3303	chr6	101144824	101144825	chunk0169_132_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	101144728	101144917	-69661062	-	LTR33	LTR	ERVL	-315	200	1	3
3304	chr6	101241568	101241569	chunk0169_136_1	5.6425	AR_DHT_Control	chr6	101241543	101241570	-69564409	+	(AAC)n	Simple_repeat	Simple_repeat	1	27	0	3
3305	chr6	102267839	102267840	chunk0169_177_1	49.5074	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	102267304	102268745	-68537234	+	L1PA7	LINE	L1	4696	6154	0	3
3306	chr6	102421136	102421137	chunk0169_182_1	38.25639	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	102420025	102423553	-68382426	+	L1PA15	LINE	L1	4644	8160	0	3
3307	chr6	102475944	102475945	chunk0169_187_1	18.59125	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	102475611	102476055	-68329924	-	L1MC1	LINE	L1	-5226	910	470	3
3308	chr6	102648252	102648253	chunk0169_194_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	102648036	102650358	-68155621	+	L1M1	LINE	L1	114	2447	-5118	3
3309	chr6	102937426	102937427	chunk0169_209_1	6.3145	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	102937008	102941850	-67864129	-	L1MCa	LINE	L1	-749	5759	835	3
3310	chr6	104162174	104162175	chunk0169_218_1	18.0716	AR_DHT_Control	chr6	104161909	104164549	-66641430	+	L1M1	LINE	L1	19	2704	-4861	3
3311	chr6	105091607	105091608	chunk0169_237_1	6.88185	AR_DHT_Control	chr6	105091588	105091687	-65714292	-	MIRc	SINE	MIR	-127	141	33	3
3312	chr6	106608308	106608309	chunk0169_350_1	22.2619	AR_DHT_Control	chr6	106607815	106608636	-64197343	+	L1MA5	LINE	L1	5492	6300	0	3
3313	chr6	106651140	106651141	chunk0169_353_1	16.92897	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	106650933	106651217	-64154762	-	L1MB2	LINE	L1	-1	6170	5853	3
3314	chr6	107271323	107271324	chunk0169_376_1	27.237	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	107270411	107271773	-63534206	-	BLACKJACK	DNA	hAT-Blackjack	-1273	1696	242	3
3315	chr6	107272495	107272496	chunk0169_377_1	9.94664	AR_DHT_Control	chr6	107272441	107272633	-63533346	+	MLT1J	LTR	ERVL-MaLR	296	512	0	3
3316	chr6	107276698	107276699	chunk0169_378_1	5.24411	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	107276630	107277067	-63528912	+	MLT1H2	LTR	ERVL-MaLR	1	485	-4	3
3317	chr6	98821103	98821104	chunk0169_61_1	37.16732	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	98820865	98821340	-71984639	+	LTR50	LTR	ERVL	9	576	-219	3
3318	chr6	108934961	108934962	chunk0170_1_1	21.62686	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	108934863	108935114	-61870865	-	MIR	SINE	MIR	-5	257	7	3
3319	chr6	110593836	110593837	chunk0170_105_1	11.1388	AR_DHT_Control	chr6	110593645	110593970	-60212009	+	MSTB	LTR	ERVL-MaLR	1	344	-82	3
3320	chr6	110633859	110633860	chunk0170_109_1	19.39309	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	110633677	110633887	-60172092	-	MIRc	SINE	MIR	-3	265	56	3
3321	chr6	110643444	110643445	chunk0170_110_1	8.31418	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	110643404	110643508	-60162471	+	L1MA3	LINE	L1	5849	5952	-353	3
3322	chr6	110898500	110898501	chunk0170_128_1	9.64794	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	110898409	110898565	-59907414	-	L1ME1	LINE	L1	-334	5845	5680	3
3323	chr6	111478991	111478992	chunk0170_155_1	10.44413	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	111478893	111479199	-59326780	+	Tigger19b	DNA	TcMar-Tigger	92	449	-101	3
3324	chr6	112202459	112202460	chunk0170_194_1	5.88709	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	112202443	112202469	-58603510	+	(GT)n	Simple_repeat	Simple_repeat	1	26	0	3
3325	chr6	112395910	112395911	chunk0170_198_1	7.62093	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	112394960	112396181	-58409798	-	L1MA5A	LINE	L1	0	6300	4947	3
3326	chr6	112601358	112601359	chunk0170_209_1	5.82105	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	112600602	112602161	-58203818	+	L1MA3	LINE	L1	22	1583	-5982	3
3327	chr6	113279916	113279917	chunk0170_222_1	14.3818	AR_DHT_Control	chr6	113279475	113280258	-57525721	+	L1MC3	LINE	L1	6711	7495	-290	3
3328	chr6	115131939	115131940	chunk0170_289_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	115131578	115132467	-55673512	+	LTR28C	LTR	ERV1	1	767	0	3
3329	chr6	116311522	116311523	chunk0170_340_1	67.9209	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	116311490	116311657	-54494322	+	L1ME4b	LINE	L1	453	641	-283	3
3330	chr6	117309261	117309262	chunk0170_392_1	5.52722	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	117309196	117309310	-53496669	+	(CACATG)n	Simple_repeat	Simple_repeat	1	126	0	3
3331	chr6	117558943	117558944	chunk0170_401_1	5.77762	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	117558490	117559022	-53246957	-	MER68	LTR	ERVL	-10	553	1	3
3332	chr6	117935993	117935994	chunk0170_408_1	5.9729	AR_DHT_Control	chr6	117935949	117936090	-52869889	-	HAL1ME	LINE	L1	-1445	1020	881	3
3333	chr6	118408548	118408549	chunk0170_422_1	4.70357	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	118408350	118409153	-52396826	+	L1PA13	LINE	L1	351	1239	-5546	3
3334	chr6	118943350	118943351	chunk0170_439_1	5.18995	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	118943260	118944081	-51861898	+	L1M1	LINE	L1	3019	3879	-3686	3
3335	chr6	119260382	119260383	chunk0170_450_1	5.23393	AR_DHT_Control	chr6	119260269	119260502	-51545477	-	L1ME3G	LINE	L1	-386	538	366	3
3336	chr6	109835072	109835073	chunk0170_82_1	5.20051	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	109835038	109835235	-60970744	+	L2c	LINE	L2	3176	3384	-3	3
3337	chr6	110042808	110042809	chunk0170_84_1	4.83532	AR_DHT_Control	chr6	110042743	110042819	-60763160	-	MamTip2	DNA	hAT-Tip100	-37	268	192	3
3338	chr6	110069678	110069679	chunk0170_85_1	5.9324	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	110069367	110070187	-60735792	+	L2a	LINE	L2	2364	3426	0	3
3339	chr6	110089419	110089420	chunk0170_86_1	11.0973	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	110089143	110089696	-60716283	+	L1MEg	LINE	L1	824	1351	-884	3
3340	chr6	122126851	122126852	chunk0171_106_1	45.10645	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	122126472	122126882	-48679097	+	L1M5	LINE	L1	3166	3624	-2522	3
3341	chr6	119757543	119757544	chunk0171_14_1	6.6093	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	119757120	119757724	-51048255	-	L1PA17	LINE	L1	-4855	2080	1509	3
3342	chr6	127956301	127956302	chunk0171_278_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	127956170	127956601	-42849378	+	MLT1C	LTR	ERVL-MaLR	1	467	0	3
3343	chr6	128398294	128398295	chunk0171_293_1	17.4971	AR_DHT_Control	chr6	128398008	128398465	-42407514	-	MER51A	LTR	ERV1	-9	625	1	3
3344	chr6	129958300	129958301	chunk0171_338_1	5.99997	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	129957897	129959908	-40846071	+	MER52D	LTR	ERV1	10	2117	-6	3
3345	chr6	130305743	130305744	chunk0171_352_1	10.7282	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	130305211	130305825	-40500154	-	L1M5	LINE	L1	-1794	4352	3735	3
3346	chr6	130749568	130749569	chunk0171_363_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	130748971	130750014	-40055965	-	LTR27E	LTR	ERV1	0	1077	1	3
3347	chr6	130985276	130985277	chunk0171_378_1	4.4788	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	130985013	130985625	-39820354	+	LTR27B	LTR	ERV1	1	594	0	3
3348	chr6	131629849	131629850	chunk0171_429_1	4.15381	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	131629663	131629917	-39176062	-	HAL1	LINE	L1	-1678	829	573	3
3349	chr6	131744025	131744026	chunk0171_441_1	28.59346	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	131743918	131744157	-39061822	-	MamRep137	DNA	TcMar-Tigger	-117	393	148	3
3350	chr6	132171088	132171089	chunk0171_451_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	132170990	132171173	-38634806	-	HERVL40-int	LTR	ERVL	-4017	1513	1328	3
3351	chr6	132286903	132286904	chunk0172_1_1	60.7469	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	132286475	132287077	-38518902	-	L1MD2	LINE	L1	-297	6062	5443	3
3352	chr6	135109975	135109976	chunk0172_116_1	37.67861	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	135109960	135110522	-35695457	+	LTR86C	LTR	ERVL	10	619	-2	3
3353	chr6	135586473	135586474	chunk0172_147_1	27.42281	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	135586144	135586512	-35219467	-	L2a	LINE	L2	0	3426	2998	3
3354	chr6	136699604	136699605	chunk0172_205_1	5.87933	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	136699109	136699612	-34106367	+	L2	LINE	L2	2473	3018	-401	3
3355	chr6	137371228	137371229	chunk0172_257_1	11.453	AR_DHT_Control	chr6	137371173	137376212	-33429767	-	MER57A-int	LTR	ERV1	0	6187	1089	3
3356	chr6	137589292	137589293	chunk0172_274_1	4.09493	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	137588304	137592558	-33213421	+	L1PB4	LINE	L1	190	4342	-2573	3
3357	chr6	133947663	133947664	chunk0172_33_1	20.26052	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	133946580	133948031	-36857948	-	ERVL-E-int	LTR	ERVL	-382	5285	3776	3
3358	chr6	140982045	140982046	chunk0172_445_1	72.8913	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	140982026	140982055	-29823924	+	(AAAAC)n	Simple_repeat	Simple_repeat	1	29	0	3
3359	chr6	134077125	134077126	chunk0172_49_1	87.6337	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	134076989	134077140	-36728839	+	L1MA8	LINE	L1	6130	6289	-2	3
3360	chr6	134361651	134361652	chunk0172_72_1	14.73006	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	134361183	134361703	-36444276	+	L2a	LINE	L2	2820	3421	-5	3
3361	chr6	143162818	143162819	chunk0173_101_1	6.28117	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	143162638	143162995	-27642984	-	MER115	DNA	hAT-Tip100	-279	414	51	3
3362	chr6	143268060	143268061	chunk0173_104_1	10.9091	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	143267888	143268184	-27537795	+	Charlie19a	DNA	hAT-Charlie	30	351	-35	3
3363	chr6	144783478	144783479	chunk0173_179_1	9.83323	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	144783440	144783734	-26022245	-	L1MA5	LINE	L1	-6	6294	6000	3
3364	chr6	146671278	146671279	chunk0173_237_1	9.21264	AR_DHT_Control	chr6	146670803	146671861	-24134118	-	L2c	LINE	L2	-123	3264	2043	3
3365	chr6	146812784	146812785	chunk0173_239_1	10.1162	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	146812282	146813026	-23992953	-	LTR34	LTR	ERV1	-1	698	3	3
3366	chr6	146833243	146833244	chunk0173_240_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	146833050	146834243	-23971736	+	L1MD2	LINE	L1	184	1346	-5194	3
3367	chr6	141995286	141995287	chunk0173_28_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	141994003	141997105	-28808874	+	L1M2	LINE	L1	721	3687	-3875	3
3368	chr6	147909729	147909730	chunk0173_282_1	63.8423	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	147909661	147909832	-22896147	+	MER58B	DNA	hAT-Charlie	171	341	0	3
3369	chr6	149103007	149103008	chunk0173_353_1	95.5883	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	149102655	149103527	-21702452	+	L1PB4	LINE	L1	5483	6330	-782	3
3370	chr6	149503732	149503733	chunk0173_373_1	6.75904	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	149503643	149504588	-21301391	+	L1MEc	LINE	L1	519	1517	-4883	3
3371	chr6	150157790	150157791	chunk0173_391_1	5.52722	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	150157503	150157955	-20648024	-	MSTB2	LTR	ERVL-MaLR	0	457	15	3
3372	chr6	142276472	142276473	chunk0173_40_1	58.48136	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	142276422	142276605	-28529374	+	MIRb	SINE	MIR	22	237	-31	3
3373	chr6	150748450	150748451	chunk0173_406_1	6.10347	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	150748441	150748507	-20057472	+	L2a	LINE	L2	3355	3422	-4	3
3374	chr6	151568730	151568731	chunk0173_444_1	17.0044	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	151568545	151569065	-19236914	-	L1ME4b	LINE	L1	-77	815	263	3
3375	chr6	142592509	142592510	chunk0173_70_1	73.8546	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	142592432	142593249	-28212730	+	L1ME2z	LINE	L1	4204	5048	-1098	3
3376	chr6	159716240	159716241	chunk0174_179_1	42.9742	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr6	159716167	159716546	-11089433	-	MLT1L	LTR	ERVL-MaLR	-6	604	215	3
3377	chr6	160699643	160699644	chunk0174_234_1	49.97303	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	160699166	160700187	-10105792	+	Tigger2b_Pri	DNA	TcMar-Tigger	2	1068	0	3
3378	chr6	153502537	153502538	chunk0174_26_1	8.15319	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	153501877	153502778	-17303201	+	L1MEd	LINE	L1	3630	4620	-1526	3
3379	chr6	153832667	153832668	chunk0174_29_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	153832599	153832892	-16973087	+	(ACACAT)n	Simple_repeat	Simple_repeat	1	296	0	3
3380	chr6	162646837	162646838	chunk0174_297_1	4.83532	AR_DHT_Control	chr6	162646621	162646956	-8159023	-	Tigger3a	DNA	TcMar-Tigger	-11	337	1	3
3381	chr6	164925801	164925802	chunk0174_376_1	7.26348	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	164925531	164926267	-5879712	+	(CA)n	Simple_repeat	Simple_repeat	1	748	0	3
3382	chr6	165028573	165028574	chunk0174_383_1	27.3192	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	165028545	165028618	-5777361	-	MLT2D	LTR	ERVL	-35	525	447	3
3383	chr6	165634751	165634752	chunk0174_407_1	18.0848	AR_DHT_Control	chr6	165634482	165634800	-5171179	-	L4_A_Mam	LINE	RTE-X	-12	4978	4660	3
3384	chr6	154569674	154569675	chunk0174_41_1	7.65994	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	154569630	154569856	-16236123	+	MIRc	SINE	MIR	19	253	-15	3
3385	chr6	165684060	165684061	chunk0174_415_1	7.53305	AR_DHT_Control	chr6	165683891	165684320	-5121659	+	L2a	LINE	L2	2960	3414	-12	3
3386	chr6	165925504	165925505	chunk0174_425_1	7.03714	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	165924707	165926058	-4879921	+	L1MD2	LINE	L1	4931	6349	-10	3
3387	chr6	155806704	155806705	chunk0174_65_1	7.69414	AR_DHT_Control	chr6	155806529	155807360	-14998619	+	L1ME2	LINE	L1	7386	8213	-2	3
3388	chr7	2847316	2847317	chunk0175_101_1	8.09329	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	2847274	2847381	-156498592	+	AluJr	SINE	Alu	176	282	-30	3
3389	chr7	2860755	2860756	chunk0175_104_1	326.0441	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	2860601	2860778	-156485195	-	MLT1I	LTR	ERVL-MaLR	-117	294	112	3
3390	chr7	2982202	2982203	chunk0175_106_1	9.72299	AR_DHT_Control	chr7	2982045	2982236	-156363737	-	L1ME1	LINE	L1	-343	5836	5622	3
3391	chr7	3545066	3545067	chunk0175_143_1	4.53037	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	3544723	3545108	-155800865	-	MLT1I	LTR	ERVL-MaLR	-6	405	1	3
3392	chr7	5514295	5514296	chunk0175_192_1	15.0481	AR_DHT_Control	chr7	5513926	5514323	-153831650	+	L2a	LINE	L2	2921	3426	0	3
3393	chr7	6012599	6012600	chunk0175_205_1	5.33602	AR_DHT_Control	chr7	6012561	6012851	-153333122	-	AluSx1	SINE	Alu	-16	296	1	3
3394	chr7	6562396	6562397	chunk0175_243_1	5.6425	AR_DHT_Control	chr7	6562165	6562530	-152783443	-	L1MC	LINE	L1	-2000	5785	5423	3
3395	chr6	167031257	167031258	chunk0175_328_1	85.96333	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	167031229	167031498	-3774481	+	L2c	LINE	L2	3000	3383	-4	3
3396	chr6	167651860	167651861	chunk0175_352_1	10.0817	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	167651396	167652230	-3153749	+	(GT)n	Simple_repeat	Simple_repeat	1	872	0	3
3397	chr6	167738104	167738105	chunk0175_356_1	14.1972	AR_DHT_Control	chr6	167738032	167738170	-3067809	+	L2b	LINE	L2	3231	3386	-1	3
3398	chr6	169617865	169617866	chunk0175_434_1	9.21264	AR_DHT_Control	chr6	169617675	169618012	-1187967	-	LTR9	LTR	ERV1	-303	309	1	3
3399	chr6	170140521	170140522	chunk0175_449_1	32.7322	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	170140201	170141066	-664913	+	Tigger3b	DNA	TcMar-Tigger	1	894	-337	3
3400	chr6	170276834	170276835	chunk0175_455_1	6.73207	AR_DHT_Control	chr6	170276711	170276883	-529096	-	Tigger19a	DNA	TcMar-Tigger	-35	288	127	3
3401	chr7	2091891	2091892	chunk0175_68_1	13.6601	AR_DHT_Control	chr7	2091792	2092254	-157253719	-	L1MC3	LINE	L1	-1930	5855	5390	3
3402	chr7	2173059	2173060	chunk0175_72_1	13.2531	AR_DHT_Control	chr7	2173036	2173807	-157172166	-	HAL1	LINE	L1	-14	2493	1665	3
3403	chr7	2315903	2315904	chunk0175_79_1	5.40567	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	2314816	2316847	-157029126	+	(CACT)n	Simple_repeat	Simple_repeat	1	2135	0	3
3404	chr7	8240414	8240415	chunk0176_13_1	97.7213	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	8239428	8245573	-151100400	+	L1PA6	LINE	L1	178	6327	0	3
3405	chr7	12788327	12788328	chunk0176_141_1	59.3695	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	12787943	12788374	-146557599	+	Tigger3b	DNA	TcMar-Tigger	1	435	-796	3
3406	chr7	13422386	13422387	chunk0176_164_1	5.96639	AR_DHT_Control	chr7	13421608	13426749	-145919224	+	L1M4	LINE	L1	639	5608	-1234	3
3407	chr7	14095359	14095360	chunk0176_198_1	28.19893	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	14095337	14095560	-145250413	+	L2	LINE	L2	2011	2235	-1184	3
3408	chr7	15109286	15109287	chunk0176_222_1	10.651	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	15109139	15109615	-144236358	+	MLT2F	LTR	ERVL	17	502	-161	3
3409	chr7	15278160	15278161	chunk0176_225_1	5.52722	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	15277354	15278246	-144067727	-	L1PA5	LINE	L1	-5139	2475	1641	3
3410	chr7	15779779	15779780	chunk0176_232_1	10.9481	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	15779713	15779880	-143566093	-	L1MEg	LINE	L1	-3688	2458	2285	3
3411	chr7	16495391	16495392	chunk0176_272_1	4.57744	AR_DHT_Control	chr7	16495372	16495727	-142850246	-	LTR16E1	LTR	ERVL	-1	537	167	3
3412	chr7	16844477	16844478	chunk0176_305_1	6.49378	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	16844247	16844490	-142501483	-	L2b	LINE	L2	-225	3150	2918	3
3413	chr7	16905401	16905402	chunk0176_311_1	15.71901	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	16904069	16905810	-142440163	-	L1MEc	LINE	L1	-4412	1988	94	3
3414	chr7	17032411	17032412	chunk0176_319_1	49.22612	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	17032119	17032440	-142313533	+	MamRTE1	LINE	RTE-BovB	3321	3644	-168	3
3415	chr7	18857365	18857366	chunk0176_395_1	123.36972	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	18857365	18857440	-140488533	+	Charlie9	DNA	hAT-Charlie	2681	2757	0	3
3416	chr7	19364276	19364277	chunk0176_414_1	20.4575	AR_DHT_Control	chr7	19364100	19364434	-139981539	-	L1ME2	LINE	L1	-4152	2263	1933	3
3417	chr7	10757208	10757209	chunk0176_43_1	12.2633	AR_DHT_Control	chr7	10757191	10757337	-148588636	-	UCON78	DNA	DNA	-93	350	204	3
3418	chr7	11391796	11391797	chunk0176_77_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	11389460	11392052	-147953921	-	L1PA7	LINE	L1	-3831	2630	8	3
3419	chr7	8191335	8191336	chunk0176_8_1	65.3053	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	8191294	8191672	-151154301	+	MER47A	DNA	TcMar-Tigger	1	366	0	3
3420	chr7	11557765	11557766	chunk0176_87_1	17.693	AR_DHT_Control	chr7	11554791	11558331	-147787642	-	L1MDa	LINE	L1	-2691	3846	17	3
3421	chr7	20393295	20393296	chunk0177_11_1	10.3263	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	20393163	20393362	-138952611	-	Tigger15a	DNA	TcMar-Tigger	-347	368	148	3
3422	chr7	22921311	22921312	chunk0177_150_1	17.73594	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	22921159	22921595	-136424378	+	L1M4b	LINE	L1	2445	2874	-3993	3
3423	chr7	23100979	23100980	chunk0177_159_1	75.85303	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	23100677	23101096	-136244877	-	MER70A	LTR	ERVL	-27	445	4	3
3424	chr7	23628802	23628803	chunk0177_188_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	23628197	23629135	-135716838	+	L1MDa	LINE	L1	51	1151	-5482	3
3425	chr7	23844996	23844997	chunk0177_201_1	35.96043	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	23844558	23847393	-135498580	+	L1PA6	LINE	L1	9	2841	-3305	3
3426	chr7	24311457	24311458	chunk0177_225_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	24311426	24311570	-135034403	-	LTR33	LTR	ERVL	-96	419	275	3
3427	chr7	24345508	24345509	chunk0177_226_1	4.19197	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	24345424	24345830	-135000143	-	L1ME3C	LINE	L1	-2237	3909	3512	3
3428	chr7	24962653	24962654	chunk0177_244_1	11.5199	AR_DHT_Control	chr7	24962494	24962872	-134383101	+	MLT1K	LTR	ERVL-MaLR	156	595	0	3
3429	chr7	25128230	25128231	chunk0177_251_1	6.41766	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	25126475	25129721	-134216252	-	L1M1	LINE	L1	-4205	3360	15	3
3430	chr7	25144442	25144443	chunk0177_252_1	8.84892	AR_DHT_Control	chr7	25144145	25144768	-134201205	-	MER115	DNA	hAT-Tip100	0	693	1	3
3431	chr7	25711223	25711224	chunk0177_285_1	46.3252	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	25711219	25711810	-133634163	-	L1MC	LINE	L1	-1908	4238	3655	3
3432	chr7	26258877	26258878	chunk0177_321_1	30.4102	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	26258851	26259104	-133086869	-	MER4B-int	LTR	ERV1	-1727	5031	4698	3
3433	chr7	20896307	20896308	chunk0177_37_1	25.41227	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	20896298	20896325	-138449648	+	(TG)n	Simple_repeat	Simple_repeat	1	27	0	3
3434	chr7	26752349	26752350	chunk0177_370_1	38.91071	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	26752067	26752727	-132593246	-	L4_A_Mam	LINE	RTE-X	-119	4871	4186	3
3435	chr7	28062650	28062651	chunk0177_444_1	13.4006	AR_DHT_Control	chr7	28062151	28062870	-131283103	+	LTR41B	LTR	ERVL	1	757	-1	3
3436	chr7	28104417	28104418	chunk0177_449_1	20.54404	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	28103467	28104450	-131241523	+	L2a	LINE	L2	2391	3426	0	3
3437	chr7	28116255	28116256	chunk0177_450_1	11.66293	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	28115629	28116437	-131229536	-	L1ME4b	LINE	L1	-1	891	114	3
3438	chr7	21086919	21086920	chunk0177_56_1	21.66663	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	21086511	21087175	-138258798	-	MLT1H1-int	LTR	ERVL-MaLR	-773	716	3	3
3439	chr7	21163527	21163528	chunk0177_61_1	42.7608	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	21163496	21163654	-138182319	-	L1M5	LINE	L1	-633	5491	5314	3
3440	chr7	32816619	32816620	chunk0178_136_1	4.83664	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	32816489	32816775	-126529198	+	L3	LINE	CR1	3722	4061	-38	3
3441	chr7	34261495	34261496	chunk0178_186_1	10.1791	AR_DHT_Control	chr7	34261331	34262001	-125083972	-	LTR85c	LTR	Gypsy?	-4	819	160	3
3442	chr7	34380327	34380328	chunk0178_194_1	14.81806	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	34378128	34381561	-124964412	-	MER57A-int	LTR	ERV1	-242	5945	1662	3
3443	chr7	35695036	35695037	chunk0178_228_1	13.13835	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	35695016	35695055	-123650918	+	G-rich	Low_complexity	Low_complexity	1	39	0	3
3444	chr7	36266883	36266884	chunk0178_253_1	7.22247	AR_DHT_Control	chr7	36266554	36267077	-123078896	-	L1MB5	LINE	L1	-1	6173	5650	3
3445	chr7	36664172	36664173	chunk0178_265_1	8.72899	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	36663872	36664691	-122681282	-	L1MCa	LINE	L1	-744	5674	4756	3
3446	chr7	36957574	36957575	chunk0178_272_1	5.82105	AR_DHT_Control	chr7	36957315	36957710	-122388263	+	L2a	LINE	L2	578	1014	-2405	3
3447	chr7	37254659	37254660	chunk0178_282_1	15.40406	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	37254398	37254772	-122091201	-	Tigger3c	DNA	TcMar-Tigger	0	602	1	3
3448	chr7	37873766	37873767	chunk0178_303_1	7.04468	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	37873725	37873885	-121472088	-	MER97d	DNA	hAT-Tip100	-894	311	79	3
3449	chr7	38292625	38292626	chunk0178_332_1	3.9241	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	38292523	38292677	-121053296	-	MIR	SINE	MIR	-47	215	64	3
3450	chr7	38306129	38306130	chunk0178_334_1	15.96448	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	38306119	38306149	-121039824	+	(GGTGG)n	Simple_repeat	Simple_repeat	1	30	0	3
3451	chr7	39649434	39649435	chunk0178_365_1	6.09452	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	39649343	39649732	-119696241	+	MLT1A1	LTR	ERVL-MaLR	4	405	-3	3
3452	chr7	40017510	40017511	chunk0178_374_1	9.68843	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	40017158	40017595	-119328378	-	L1ME3G	LINE	L1	-381	543	55	3
3453	chr7	29538713	29538714	chunk0178_40_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	29538168	29540969	-129805004	+	L1MA2	LINE	L1	16	2895	-4670	3
3454	chr7	41190130	41190131	chunk0178_432_1	49.85477	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	41190089	41190735	-118155238	+	MER45B	DNA	hAT-Tip100	400	1040	0	3
3455	chr7	30594972	30594973	chunk0178_95_1	8.24382	AR_DHT_Control	chr7	30594953	30594985	-128750988	+	(TGCTGC)n	Simple_repeat	Simple_repeat	1	34	0	3
3456	chr7	45093377	45093378	chunk0179_112_1	5.87242	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	45092115	45093498	-114252475	+	L1MB8	LINE	L1	154	1610	-5257	3
3457	chr7	46341739	46341740	chunk0179_156_1	19.71668	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	46340145	46341859	-113004114	-	L1P2	LINE	L1	-3823	2323	605	3
3458	chr7	46986979	46986980	chunk0179_180_1	6.73207	AR_DHT_Control	chr7	46986873	46987431	-112358542	-	MLT1E1-int	LTR	ERVL-MaLR	-887	602	2	3
3459	chr7	47598365	47598366	chunk0179_211_1	6.35432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	47597140	47600035	-111745938	+	HUERS-P2-int	LTR	ERV1	1	3086	-2	3
3460	chr7	47775339	47775340	chunk0179_218_1	31.63527	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	47775169	47776369	-111569604	+	L1M5	LINE	L1	2505	3688	-2458	3
3461	chr7	47969824	47969825	chunk0179_232_1	4.74037	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	47969678	47969948	-111376025	+	L1M8	LINE	L1	468	749	-1606	3
3462	chr7	48632113	48632114	chunk0179_254_1	8.03974	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	48630152	48632193	-110713780	-	L1PA15	LINE	L1	-6	6159	4126	3
3463	chr7	49241332	49241333	chunk0179_265_1	6.35715	AR_DHT_Control	chr7	49241306	49241725	-110104248	-	MLT1I	LTR	ERVL-MaLR	-10	401	1	3
3464	chr7	49319987	49319988	chunk0179_269_1	4.55696	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	49319019	49320462	-110025511	+	L1MD2	LINE	L1	5214	6741	-9	3
3465	chr7	49346439	49346440	chunk0179_271_1	18.42282	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	49346257	49346529	-109999444	-	L2	LINE	L2	-605	2814	2534	3
3466	chr7	49563675	49563676	chunk0179_280_1	9.69227	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	49563264	49566170	-109779803	+	L1PA16	LINE	L1	1	2951	-3532	3
3467	chr7	49770550	49770551	chunk0179_293_1	44.317	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	49770521	49770669	-109575304	-	MIR3	SINE	MIR	-39	169	15	3
3468	chr7	43107833	43107834	chunk0179_31_1	49.0139	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	43107501	43107863	-116238110	+	L2c	LINE	L2	2918	3273	-114	3
3469	chr7	50585456	50585457	chunk0179_327_1	24.69257	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr7	50585430	50585692	-108760281	-	MamRep137	DNA	TcMar-Tigger	-122	388	116	3
3470	chr7	51180795	51180796	chunk0179_371_1	48.311	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	51179505	51181236	-108164737	+	LTR49-int	LTR	ERV1	4209	5991	-2129	3
3471	chr7	51543837	51543838	chunk0179_398_1	20.0108	AR_DHT_Control	chr7	51541914	51544356	-107801617	-	L1PB1	LINE	L1	-3543	3319	834	3
3472	chr7	51557485	51557486	chunk0179_399_1	4.06817	AR_DHT_Control	chr7	51552137	51558291	-107787682	-	L1PA6	LINE	L1	0	6154	5	3
3473	chr7	51860661	51860662	chunk0179_423_1	15.25319	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	51860479	51860746	-107485227	+	MIR	SINE	MIR	1	257	-5	3
3474	chr7	52184690	52184691	chunk0179_433_1	5.37222	AR_DHT_Control	chr7	52184583	52184774	-107161199	-	MER34B	LTR	ERV1	-381	184	1	3
3475	chr7	52816764	52816765	chunk0179_459_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	52815911	52817047	-106528926	+	L1MA9	LINE	L1	1532	2436	-5050	3
3476	chr7	43896873	43896874	chunk0179_64_1	27.9551	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	43896848	43896918	-115449055	+	(ATTT)n	Simple_repeat	Simple_repeat	1	75	0	3
3477	chr7	44299032	44299033	chunk0179_77_1	12.5882	AR_DHT_Control	chr7	44298145	44299561	-115046412	+	L1MB4	LINE	L1	4928	6354	-1	3
3478	chr7	42426255	42426256	chunk0179_8_1	13.838	AR_DHT_Control	chr7	42425344	42426501	-116919472	-	Tigger3b	DNA	TcMar-Tigger	-13	1218	25	3
3479	chr7	44469017	44469018	chunk0179_84_1	7.99358	AR_DHT_Control	chr7	44469001	44469410	-114876563	+	LTR54	LTR	ERV1	21	510	0	3
3480	chr7	55261342	55261343	chunk0180_101_1	5.3309	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	55260815	55262323	-104083650	+	L1M3e	LINE	L1	466	2690	-4806	3
3481	chr7	55365964	55365965	chunk0180_110_1	16.3755	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	55365946	55365982	-103979991	+	(CGG)n	Simple_repeat	Simple_repeat	1	37	0	3
3482	chr7	55464310	55464311	chunk0180_119_1	6.28117	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	55462917	55465186	-103880787	-	L1MA4A	LINE	L1	-4894	2315	1	3
3483	chr7	53230888	53230889	chunk0180_14_1	7.3092	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	53230718	53231551	-106114422	-	L1MC5	LINE	L1	-12	9292	8435	3
3484	chr7	56620720	56620721	chunk0180_143_1	5.0408	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	56620419	56620848	-102725125	+	MER61B	LTR	ERV1	1	427	0	3
3485	chr7	64533938	64533939	chunk0180_156_1	15.08382	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	64532333	64535133	-94810840	+	L1PB1	LINE	L1	3940	6833	-34	3
3486	chr7	65049097	65049098	chunk0180_164_1	22.0454	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	65048953	65049215	-94296758	+	Charlie15b	DNA	hAT-Charlie	645	933	-128	3
3487	chr7	65430002	65430003	chunk0180_174_1	12.89264	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr7	65429952	65430146	-93915827	+	(GTGACAC)n	Simple_repeat	Simple_repeat	1	213	0	3
3488	chr7	65489596	65489597	chunk0180_176_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	65488937	65489682	-93856291	+	(ATTCC)n	Simple_repeat	Simple_repeat	1	754	0	3
3489	chr7	66443141	66443142	chunk0180_207_1	18.59116	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	66442906	66443791	-92902182	+	L1MEc	LINE	L1	1987	2861	-3458	3
3490	chr7	53645786	53645787	chunk0180_21_1	5.69226	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	53645190	53646987	-105698986	-	L1MC3	LINE	L1	-1868	5917	4178	3
3491	chr7	66781776	66781777	chunk0180_213_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	66781619	66782065	-92563908	-	L1MEc	LINE	L1	-5915	485	39	3
3492	chr7	69398856	69398857	chunk0180_256_1	5.29288	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	69398848	69399191	-89946782	+	MSTD	LTR	ERVL-MaLR	3	396	0	3
3493	chr7	53854069	53854070	chunk0180_28_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	53853824	53854423	-105491550	-	MER73	LTR	ERVL	-17	627	9	3
3494	chr7	72632841	72632842	chunk0180_326_1	8.38514	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	72632709	72632930	-86713043	-	MIR	SINE	MIR	-12	250	43	3
3495	chr7	73665327	73665328	chunk0180_352_1	16.06005	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	73665264	73665404	-85680569	+	AluSz	SINE	Alu	130	290	-22	3
3496	chr7	73801932	73801933	chunk0180_360_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	73801180	73802181	-85543792	+	MER34B-int	LTR	ERV1	1236	2231	-3125	3
3497	chr7	74496196	74496197	chunk0180_386_1	13.68102	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr7	74496054	74496681	-84849292	+	(TGTA)n	Simple_repeat	Simple_repeat	1	630	0	3
3498	chr7	75732804	75732805	chunk0180_404_1	38.5079	AR_DHT_Control	chr7	75732764	75732900	-83613073	-	MER5A1	DNA	hAT-Charlie	0	166	16	3
3499	chr7	76121719	76121720	chunk0180_422_1	16.27964	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	76121497	76122390	-83223583	+	L1MEc	LINE	L1	1980	2861	-3458	3
3500	chr7	77498976	77498977	chunk0180_456_1	6.6833	AR_DHT_Control	chr7	77498930	77499348	-81846625	+	L4_A_Mam	LINE	RTE-X	4426	4868	-122	3
3501	chr7	54713530	54713531	chunk0180_51_1	75.1682	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	54713324	54713692	-104632281	-	LTR53-int	LTR	ERVL	-2424	3261	2681	3
3502	chr7	77727736	77727737	chunk0181_13_1	42.74175	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	77727572	77727765	-81618208	-	AluJr	SINE	Alu	-138	174	1	3
3503	chr7	82945269	82945270	chunk0181_173_1	24.79329	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	82945105	82945274	-76400699	+	L3	LINE	CR1	804	971	-3128	3
3504	chr7	83051331	83051332	chunk0181_178_1	4.96282	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	83050927	83052174	-76293799	+	L1MC	LINE	L1	3848	5131	-1015	3
3505	chr7	83828715	83828716	chunk0181_200_1	9.69227	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	83828696	83829093	-75516880	+	MSTA	LTR	ERVL-MaLR	1	426	-2	3
3506	chr7	85341405	85341406	chunk0181_244_1	7.30624	AR_DHT_Control	chr7	85341363	85341521	-74004452	+	Tigger14a	DNA	TcMar-Tigger	125	291	-33	3
3507	chr7	85426593	85426594	chunk0181_248_1	6.48643	AR_DHT_Control	chr7	85426303	85429218	-73916755	+	L1MA2	LINE	L1	20	3137	-4428	3
3508	chr7	85752225	85752226	chunk0181_251_1	42.0857	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	85750666	85753063	-73592910	+	L1PA13	LINE	L1	1227	3650	-3116	3
3509	chr7	86600819	86600820	chunk0181_277_1	8.24382	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	86599523	86602949	-72743024	+	L1PA13	LINE	L1	860	4523	-3618	3
3510	chr7	86982475	86982476	chunk0181_295_1	21.733	AR_DHT_Control	chr7	86981685	86985673	-72360300	+	L1PA6	LINE	L1	174	4137	-2182	3
3511	chr7	87159807	87159808	chunk0181_305_1	105.7568	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	87159696	87159951	-72186022	-	Tigger3a	DNA	TcMar-Tigger	0	348	1	3
3512	chr7	87677427	87677428	chunk0181_320_1	7.29092	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	87677314	87677666	-71668307	+	L1MA9	LINE	L1	6432	6807	-147	3
3513	chr7	88045572	88045573	chunk0181_333_1	8.76676	AR_DHT_Control	chr7	88045432	88045888	-71300085	-	L1MA8	LINE	L1	-21	6270	5794	3
3514	chr7	89694878	89694879	chunk0181_394_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	89694097	89695849	-69650124	+	L1MA1	LINE	L1	22	1758	-5807	3
3515	chr7	89733283	89733284	chunk0181_395_1	4.22747	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	89733209	89733582	-69612391	-	ERVL-B4-int	LTR	ERVL	-805	4909	4535	3
3516	chr7	89798377	89798378	chunk0181_398_1	6.93299	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	89793924	89799175	-69546798	-	L1PA13	LINE	L1	-1298	5468	286	3
3517	chr7	90157629	90157630	chunk0181_410_1	16.77135	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	90157121	90157674	-69188299	-	MLT1K	LTR	ERVL-MaLR	-4	591	8	3
3518	chr7	90489148	90489149	chunk0181_434_1	14.77273	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	90489053	90489342	-68856631	-	HAL1ME	LINE	L1	0	2465	2187	3
3519	chr7	79903653	79903654	chunk0181_45_1	6.92922	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	79902886	79903982	-79441991	+	Tigger1	DNA	TcMar-Tigger	1300	2418	0	3
3520	chr7	90754649	90754650	chunk0181_454_1	23.18644	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	90750898	90755624	-68590349	+	L1PA16	LINE	L1	2037	6860	-9	3
3521	chr7	90767283	90767284	chunk0181_458_1	14.23235	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	90766679	90767308	-68578665	-	LTR18B	LTR	ERVL	0	614	1	3
3522	chr7	79915865	79915866	chunk0181_47_1	6.88185	AR_DHT_Control	chr7	79915077	79919714	-79426259	+	L1P2	LINE	L1	5	4670	-1476	3
3523	chr7	80386336	80386337	chunk0181_92_1	6.76351	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	80386240	80386376	-78959597	+	MIRb	SINE	MIR	81	224	-44	3
3524	chr7	93592612	93592613	chunk0182_112_1	9.06209	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	93592558	93592777	-65753196	-	MIRb	SINE	MIR	-15	253	2	3
3525	chr7	93810738	93810739	chunk0182_114_1	37.5212	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	93810598	93810805	-65535168	-	MER58A	DNA	hAT-Charlie	0	224	2	3
3526	chr7	94561411	94561412	chunk0182_134_1	24.1336	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	94561305	94562255	-64783718	+	L4_A_Mam	LINE	RTE-X	3772	4856	-134	3
3527	chr7	96395080	96395081	chunk0182_222_1	8.72899	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	96394305	96396094	-62949879	-	L1MA3	LINE	L1	-3412	4153	2355	3
3528	chr7	97201495	97201496	chunk0182_254_1	9.87004	AR_DHT_Control	chr7	97201492	97201602	-62144371	+	L2a	LINE	L2	3305	3421	-5	3
3529	chr7	97897099	97897100	chunk0182_268_1	11.1999	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	97896742	97897218	-61448755	+	L1M2	LINE	L1	6163	6624	-941	3
3530	chr7	98400548	98400549	chunk0182_298_1	7.47392	AR_DHT_Control	chr7	98400243	98400714	-60945259	+	G-rich	Low_complexity	Low_complexity	1	481	0	3
3531	chr7	99002428	99002429	chunk0182_321_1	4.29711	AR_DHT_Control	chr7	99001781	99002479	-60343494	+	L1MD2	LINE	L1	5622	6342	-17	3
3532	chr7	99134283	99134284	chunk0182_333_1	25.29665	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	99134255	99134294	-60211679	+	L1MD2	LINE	L1	6207	6245	-114	3
3533	chr7	99260621	99260622	chunk0182_338_1	4.93365	AR_DHT_Control	chr7	99260510	99260716	-60085257	-	MIR	SINE	MIR	-42	220	43	3
3534	chr7	99481287	99481288	chunk0182_349_1	70.86	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	99481023	99481460	-59864513	-	L1ME4a	LINE	L1	-117	6007	5522	3
3535	chr7	100022812	100022813	chunk0182_374_1	4.2558	AR_DHT_Control	chr7	100022698	100022830	-59323143	+	MIRb	SINE	MIR	120	247	-21	3
3536	chr7	90902839	90902840	chunk0182_4_1	6.73207	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	90901740	90903853	-68442120	+	L1MA4A	LINE	L1	4114	6297	-6	3
3537	chr7	101143990	101143991	chunk0182_419_1	5.48927	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	101143790	101144087	-58201886	+	AluJb	SINE	Alu	9	301	-11	3
3538	chr7	101144465	101144466	chunk0182_420_1	4.60172	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	101144420	101144724	-58201249	+	AluJb	SINE	Alu	1	312	0	3
3539	chr7	101488836	101488837	chunk0182_435_1	15.44723	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	101488825	101489205	-57856768	+	LTR37A	LTR	ERV1	39	426	0	3
3540	chr7	92252770	92252771	chunk0182_69_1	161.2916	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	92252587	92253268	-67092705	-	L1MC4	LINE	L1	-942	7100	6461	3
3541	chr7	92297098	92297099	chunk0182_75_1	15.28725	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	92297046	92297266	-67048707	-	MIR	SINE	MIR	0	262	8	3
3542	chr7	92636070	92636071	chunk0182_82_1	7.91804	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	92636068	92636358	-66709615	-	AluJo	SINE	Alu	-24	288	1	3
3543	chr7	91038228	91038229	chunk0182_9_1	13.63366	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	91038222	91038261	-68307712	-	L3	LINE	CR1	-1210	2889	2852	3
3544	chr7	102879186	102879187	chunk0183_10_1	8.03415	AR_DHT_Control	chr7	102878782	102879433	-56466540	+	L1M6	LINE	L1	84	790	-5706	3
3545	chr7	105345943	105345944	chunk0183_114_1	44.6256	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	105345771	105345965	-54000008	-	MER3	DNA	hAT-Charlie	0	209	5	3
3546	chr7	103009725	103009726	chunk0183_15_1	7.74912	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	103009209	103011352	-56334621	+	L1PA15	LINE	L1	3	1817	-4872	3
3547	chr7	106183237	106183238	chunk0183_177_1	46.1286	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	106182753	106183357	-53162616	-	L1ME1	LINE	L1	-1	6178	5575	3
3548	chr7	106328667	106328668	chunk0183_196_1	32.6494	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	106328378	106328682	-53017291	+	MamGypLTR1c	LTR	Gypsy	501	800	-3	3
3549	chr7	103373246	103373247	chunk0183_20_1	5.9729	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	103372760	103373690	-55972283	+	L1MC5a	LINE	L1	1590	2468	-309	3
3550	chr7	106433345	106433346	chunk0183_210_1	103.4258	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	106432820	106434160	-52911813	+	L1MC4a	LINE	L1	5272	6638	-1244	3
3551	chr7	106672525	106672526	chunk0183_220_1	68.71847	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	106671761	106675311	-52670662	+	L1PA6	LINE	L1	4	3567	-2579	3
3552	chr7	106869865	106869866	chunk0183_226_1	5.69781	AR_DHT_Control	chr7	106869845	106870075	-52475898	-	MIR	SINE	MIR	-12	250	20	3
3553	chr7	106912537	106912538	chunk0183_231_1	38.77631	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	106912481	106912649	-52433324	+	MIRb	SINE	MIR	106	268	0	3
3554	chr7	106950674	106950675	chunk0183_233_1	11.0326	AR_DHT_Control	chr7	106950642	106950785	-52395188	+	L2a	LINE	L2	3273	3425	-1	3
3555	chr7	107150391	107150392	chunk0183_249_1	36.7769	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	107150369	107150500	-52195473	-	L1MA3	LINE	L1	-7	6298	6168	3
3556	chr7	107643094	107643095	chunk0183_288_1	9.63462	AR_DHT_Control	chr7	107643092	107643538	-51702435	+	LTR24B	LTR	ERV1	96	569	-7	3
3557	chr7	109309953	109309954	chunk0183_369_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	109309291	109310042	-50035931	+	L1PA15	LINE	L1	496	1295	-5491	3
3558	chr7	109584782	109584783	chunk0183_379_1	7.36432	AR_DHT_Control	chr7	109584381	109587543	-49758430	+	L1PA16	LINE	L1	2419	5635	-848	3
3559	chr7	109812708	109812709	chunk0183_382_1	10.1791	AR_DHT_Control	chr7	109812672	109812836	-49533137	-	L1MD2	LINE	L1	-510	5849	5694	3
3560	chr7	110346334	110346335	chunk0183_402_1	9.30518	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	110346246	110346415	-48999558	+	MER103C	DNA	hAT-Charlie	127	297	0	3
3561	chr7	111262711	111262712	chunk0183_447_1	127.1084	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	111262497	111262976	-48082997	+	LTR80A	LTR	ERVL	78	583	0	3
3562	chr7	104176921	104176922	chunk0183_65_1	6.44773	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	104176747	104177558	-55168415	+	LOR1-int	LTR	ERV1	1015	2368	-3819	3
3563	chr7	105056015	105056016	chunk0183_93_1	22.03804	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	105056008	105056098	-54289875	+	L2c	LINE	L2	3285	3379	-8	3
3564	chr7	111750322	111750323	chunk0184_11_1	91.72092	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	111750188	111750738	-47595235	+	LTR80A	LTR	ERVL	3	583	0	3
3565	chr7	113714513	113714514	chunk0184_113_1	116.85267	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	113714285	113714684	-45631289	-	Tigger3b	DNA	TcMar-Tigger	-801	430	2	3
3566	chr7	115776194	115776195	chunk0184_144_1	77.2837	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	115776051	115776531	-43569442	-	MLT1F2	LTR	ERVL-MaLR	-2	678	1	3
3567	chr7	116781203	116781204	chunk0184_186_1	11.68564	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	116780883	116781411	-42564562	+	MER74A	LTR	ERVL	19	558	0	3
3568	chr7	116953188	116953189	chunk0184_196_1	5.50096	AR_DHT_Control	chr7	116952980	116953196	-42392777	+	MIR	SINE	MIR	8	258	-4	3
3569	chr7	117442905	117442906	chunk0184_219_1	7.97514	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	117442891	117443041	-41902932	-	MIRb	SINE	MIR	-57	211	40	3
3570	chr7	117573051	117573052	chunk0184_233_1	21.57061	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	117573036	117573073	-41772900	+	(TC)n	Simple_repeat	Simple_repeat	1	38	0	3
3571	chr7	118575531	118575532	chunk0184_271_1	68.95797	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	118575483	118575707	-40770266	-	L2a	LINE	L2	-1	3425	3193	3
3572	chr7	118712023	118712024	chunk0184_286_1	30.7237	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	118711717	118712037	-40633936	+	L1ME3A	LINE	L1	6903	7217	-47	3
3573	chr7	119965474	119965475	chunk0184_301_1	93.2482	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	119965362	119965737	-39380236	+	MLT2B4	LTR	ERVL	1	437	-119	3
3574	chr7	120326785	120326786	chunk0184_319_1	19.90595	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	120326701	120326871	-39019102	+	L2a	LINE	L2	3252	3426	0	3
3575	chr7	120414892	120414893	chunk0184_322_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	120414790	120415306	-38930667	+	L2b	LINE	L2	1022	1539	-1880	3
3576	chr7	120743383	120743384	chunk0184_347_1	14.60244	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	120743369	120743904	-38602069	-	L2b	LINE	L2	-6	3369	2803	3
3577	chr7	120763423	120763424	chunk0184_349_1	4.70357	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	120762894	120764181	-38581792	-	L1M1	LINE	L1	-6262	1303	8	3
3578	chr7	121676614	121676615	chunk0184_396_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	121676329	121676764	-37669209	-	LTR16B1	LTR	ERVL	0	480	8	3
3579	chr7	121761803	121761804	chunk0184_397_1	10.1791	AR_DHT_Control	chr7	121760867	121762351	-37583622	+	L1MB5	LINE	L1	4692	6167	-7	3
3580	chr7	112211740	112211741	chunk0184_41_1	9.56062	AR_DHT_Control	chr7	112211724	112211921	-47134052	+	L2c	LINE	L2	3170	3366	-21	3
3581	chr7	122630531	122630532	chunk0184_415_1	11.6187	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	122630467	122630697	-36715276	-	L2	LINE	L2	-437	2982	2757	3
3582	chr7	112239912	112239913	chunk0184_42_1	5.10868	AR_DHT_Control	chr7	112239612	112240241	-47105732	+	L1MA3	LINE	L1	2930	3537	-4028	3
3583	chr7	112651616	112651617	chunk0184_74_1	9.85287	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	112650362	112654347	-46691626	+	L1MA9	LINE	L1	1817	6026	-522	3
3584	chr7	112848544	112848545	chunk0184_79_1	8.27376	AR_DHT_Control	chr7	112848352	112848545	-46497428	-	L2c	LINE	L2	-8	3379	3182	3
3585	chr7	113268792	113268793	chunk0184_90_1	6.54035	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	113268035	113269654	-46076319	+	L1PA17	LINE	L1	506	1888	-5327	3
3586	chr7	127018603	127018604	chunk0185_136_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	127018509	127019019	-32326954	+	MLT1J	LTR	ERVL-MaLR	4	512	0	3
3587	chr7	128427479	128427480	chunk0185_197_1	13.5467	AR_DHT_Control	chr7	128427428	128427786	-30918187	+	MER119	DNA	hAT-Charlie	93	510	-73	3
3588	chr7	128448901	128448902	chunk0185_199_1	36.20335	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	128448835	128449202	-30896771	-	L2a	LINE	L2	0	3426	3041	3
3589	chr7	129361066	129361067	chunk0185_232_1	6.92693	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	129360980	129361142	-29984831	+	MER5A1	DNA	hAT-Charlie	3	166	0	3
3590	chr7	129998694	129998695	chunk0185_243_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	129998559	129998904	-29347069	-	L2c	LINE	L2	-553	2866	2497	3
3591	chr7	130786285	130786286	chunk0185_270_1	6.44773	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	130785909	130786604	-28559369	-	L1ME2	LINE	L1	-4935	2233	1534	3
3592	chr7	131145238	131145239	chunk0185_297_1	6.0927	AR_DHT_Control	chr7	131145086	131145523	-28200450	+	CR1-3_Croc	LINE	CR1	2156	2604	-1001	3
3593	chr7	133029532	133029533	chunk0185_375_1	10.2513	AR_DHT_Control	chr7	133029150	133029533	-26316440	-	L1MA7	LINE	L1	-10	6324	5863	3
3594	chr7	135009135	135009136	chunk0185_447_1	14.1597	AR_DHT_Control	chr7	135006915	135009441	-24336532	+	L1MB7	LINE	L1	3374	5962	-222	3
3595	chr7	135074374	135074375	chunk0185_451_1	8.27376	AR_DHT_Control	chr7	135074234	135074470	-24271503	-	MLT1K	LTR	ERVL-MaLR	-326	269	11	3
3596	chr7	135376359	135376360	chunk0185_457_1	5.52722	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	135376279	135376381	-23969592	-	MamRTE1	LINE	RTE-BovB	-653	3159	3048	3
3597	chr7	124828993	124828994	chunk0185_61_1	32.74584	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	124828896	124829000	-34516973	+	CR1-L3A_Croc	LINE	CR1	3704	3807	-481	3
3598	chr7	135477548	135477549	chunk0186_1_1	8.27376	AR_DHT_Control	chr7	135477450	135477693	-23868280	-	L1ME4b	LINE	L1	-127	765	519	3
3599	chr7	138460458	138460459	chunk0186_132_1	4.15945	AR_DHT_Control	chr7	138460458	138460486	-20885487	+	GA-rich	Low_complexity	Low_complexity	1	28	0	3
3600	chr7	138514848	138514849	chunk0186_137_1	5.73469	AR_DHT_Control	chr7	138514750	138514871	-20831102	-	MIRb	SINE	MIR	-74	194	58	3
3601	chr7	140811409	140811410	chunk0186_237_1	6.48643	AR_DHT_Control	chr7	140811375	140811805	-18534168	-	LTR55	LTR	ERVL?	-135	413	1	3
3602	chr7	140910015	140910016	chunk0186_240_1	86.7273	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	140909858	140910088	-18435885	-	MER20B	DNA	hAT-Charlie	-507	276	56	3
3603	chr7	141080906	141080907	chunk0186_255_1	27.1823	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	141080755	141081355	-18264618	+	Tigger3b	DNA	TcMar-Tigger	1	626	-605	3
3604	chr7	141492212	141492213	chunk0186_262_1	6.10159	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	141491864	141492540	-17853433	+	L2a	LINE	L2	2694	3426	0	3
3605	chr7	142596357	142596358	chunk0186_290_1	18.64566	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	142596289	142596405	-16749568	-	L2a	LINE	L2	-3	3423	3309	3
3606	chr7	142902047	142902048	chunk0186_306_1	4.33434	AR_DHT_Control	chr7	142901836	142902324	-16443649	-	L2	LINE	L2	-1236	2183	1632	3
3607	chr7	142949643	142949644	chunk0186_309_1	18.91025	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	142949394	142949663	-16396310	+	L2a	LINE	L2	3149	3426	0	3
3608	chr7	143003112	143003113	chunk0186_313_1	176.6529	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	143002898	143003326	-16342647	+	LTR16B2	LTR	ERVL	1	462	0	3
3609	chr7	143231086	143231087	chunk0186_333_1	9.56998	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	143230509	143231378	-16114595	+	(CA)n	Simple_repeat	Simple_repeat	1	896	0	3
3610	chr7	143370435	143370436	chunk0186_343_1	13.02724	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	143370360	143370905	-15975068	+	MER41A	LTR	ERV1	1	554	0	3
3611	chr7	143849988	143849989	chunk0186_357_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	143846343	143850749	-15495224	+	L1MA6	LINE	L1	3168	7719	0	3
3612	chr7	143967562	143967563	chunk0186_369_1	19.9017	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	143967460	143967849	-15378124	-	Tigger3a	DNA	TcMar-Tigger	0	348	6	3
3613	chr7	144097475	144097476	chunk0186_373_1	11.1716	AR_DHT_Control	chr7	144097076	144098061	-15247912	+	L1M5	LINE	L1	4176	5214	-932	3
3614	chr7	145810821	145810822	chunk0186_410_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	145810100	145811381	-13534592	+	L1M1	LINE	L1	12	1372	-6193	3
3615	chr7	146682245	146682246	chunk0186_429_1	46.1996	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	146682212	146682250	-12663723	+	(AT)n	Simple_repeat	Simple_repeat	1	38	0	3
3616	chr7	146715340	146715341	chunk0186_433_1	8.91509	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	146715048	146715352	-12630621	+	AluSq2	SINE	Alu	1	303	-10	3
3617	chr7	147034002	147034003	chunk0186_437_1	5.0921	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	147033827	147034304	-12311669	-	MER66D	LTR	ERV1	-36	598	77	3
3618	chr7	147040051	147040052	chunk0186_438_1	4.32388	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	147039824	147040233	-12305740	+	L1PA14	LINE	L1	5010	5401	-745	3
3619	chr7	148191436	148191437	chunk0186_450_1	13.2275	AR_DHT_Control	chr7	148191060	148191484	-11154489	+	MSTD	LTR	ERVL-MaLR	1	396	0	3
3620	chr7	137162609	137162610	chunk0186_68_1	4.5547	AR_DHT_Control	chr7	137162411	137162796	-22183177	+	L1M6	LINE	L1	1049	1445	-5051	3
3621	chr7	137197567	137197568	chunk0186_74_1	26.44234	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	137197356	137198758	-22147215	-	L1MD1	LINE	L1	-4694	1548	48	3
3622	chr7	137209684	137209685	chunk0186_76_1	23.347	AR_DHT_Control	chr7	137209653	137209703	-22136270	-	LTR16B	LTR	ERVL	-413	50	1	3
3623	chr8	5346817	5346818	chunk0187_106_1	77.8042	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	5346804	5346824	-139791812	+	A-rich	Low_complexity	Low_complexity	1	19	0	3
3624	chr7	148437376	148437377	chunk0187_112_1	7.64898	AR_DHT_Control	chr7	148436928	148437780	-10908193	-	LTR1A2	LTR	ERV1	0	837	1	3
3625	chr7	148579210	148579211	chunk0187_115_1	7.12934	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	148578995	148579309	-10766664	-	HERVL-int	LTR	ERVL	-1997	3657	3326	3
3626	chr7	149130618	149130619	chunk0187_124_1	5.86499	AR_DHT_Control	chr7	149130395	149130681	-10215292	-	L1ME1	LINE	L1	-455	5724	5454	3
3627	chr7	149490312	149490313	chunk0187_137_1	4.15945	AR_DHT_Control	chr7	149490290	149491214	-9854759	-	L2a	LINE	L2	-2028	1391	178	3
3628	chr7	150003487	150003488	chunk0187_151_1	19.53232	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	150003182	150004275	-9341698	+	(GT)n	Simple_repeat	Simple_repeat	1	1178	0	3
3629	chr7	150190122	150190123	chunk0187_155_1	19.8997	AR_DHT_Control	chr7	150188822	150190710	-9155263	-	L1MC4	LINE	L1	-1260	7577	5581	3
3630	chr7	150651570	150651571	chunk0187_162_1	28.14136	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	150650491	150652193	-8693780	-	L1PB1	LINE	L1	-8	6609	4867	3
3631	chr7	150903841	150903842	chunk0187_173_1	19.33279	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	150903711	150903884	-8442089	-	L3b	LINE	CR1	-492	4740	4565	3
3632	chr7	150919071	150919072	chunk0187_177_1	9.1484	AR_DHT_Control	chr7	150918938	150919816	-8426157	-	L1MC3	LINE	L1	0	7785	6845	3
3633	chr7	151304919	151304920	chunk0187_185_1	54.6291	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	151304883	151305648	-8040325	-	HAL1	LINE	L1	-27	2480	1566	3
3634	chr7	151313111	151313112	chunk0187_187_1	7.17788	AR_DHT_Control	chr7	151312637	151313973	-8032000	+	(GT)n	Simple_repeat	Simple_repeat	1	1358	0	3
3635	chr7	151797854	151797855	chunk0187_203_1	6.77976	AR_DHT_Control	chr7	151797840	151797932	-7548041	+	MER112	DNA	hAT-Charlie	5	99	-162	3
3636	chr7	151831268	151831269	chunk0187_209_1	21.19718	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	151830935	151831478	-7514495	+	L1MB8	LINE	L1	5345	5900	-278	3
3637	chr7	152361863	152361864	chunk0187_228_1	55.4682	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	152361795	152361900	-6984073	+	L1MEd	LINE	L1	2462	2574	-3572	3
3638	chr7	153843161	153843162	chunk0187_252_1	12.62075	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr7	153842994	153843299	-5502674	+	(CACA)n	Simple_repeat	Simple_repeat	1	305	0	3
3639	chr7	154603949	154603950	chunk0187_256_1	5.99044	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	154603743	154604043	-4741930	+	L1ME3A	LINE	L1	5856	6166	-7	3
3640	chr7	155670553	155670554	chunk0187_285_1	18.15901	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	155670523	155670709	-3675264	+	MIR	SINE	MIR	34	230	-32	3
3641	chr7	156258307	156258308	chunk0187_303_1	4.63316	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	156257973	156258383	-3087590	+	MLT1J	LTR	ERVL-MaLR	43	441	-71	3
3642	chr7	156693849	156693850	chunk0187_328_1	11.85749	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	156693241	156694165	-2651808	+	L1M3	LINE	L1	3068	3993	-2147	3
3643	chr7	156820785	156820786	chunk0187_338_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	156819635	156821920	-2524053	+	ERVL-B4-int	LTR	ERVL	1894	4224	-1490	3
3644	chr8	1368302	1368303	chunk0187_41_1	4.96282	AR_DHT_Control	chr8	1368107	1368434	-143770202	+	(TGTA)n	Simple_repeat	Simple_repeat	1	337	0	3
3645	chr7	158595249	158595250	chunk0187_422_1	112.6888	SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	158595097	158595342	-750631	+	(GGTGGT)n	Simple_repeat	Simple_repeat	4	246	0	3
3646	chr7	158658694	158658695	chunk0187_427_1	5.50529	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	158658634	158658731	-687242	-	L2a	LINE	L2	-14	3412	3316	3
3647	chr7	158988235	158988236	chunk0187_442_1	5.9328	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	158986823	158988947	-357026	+	(TCCA)n	Simple_repeat	Simple_repeat	1	2143	0	3
3648	chr7	159133825	159133826	chunk0187_448_1	20.76197	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	159133402	159133865	-212108	+	MER34B-int	LTR	ERV1	1184	1672	-3684	3
3649	chr8	3523754	3523755	chunk0187_87_1	16.66666	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr8	3523736	3523780	-141614856	+	(ACACATGCAC)n	Simple_repeat	Simple_repeat	1	44	0	3
3650	chr8	6339101	6339102	chunk0188_12_1	67.34273	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	6339058	6339503	-138799133	+	MER61C	LTR	ERV1	1	427	-1	3
3651	chr8	10030928	10030929	chunk0188_148_1	24.9429	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	10030625	10030968	-135107668	-	L1ME1	LINE	L1	-117	6062	5695	3
3652	chr8	10351855	10351856	chunk0188_150_1	15.29178	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	10351746	10351868	-134786768	-	MER5A1	DNA	hAT-Charlie	0	166	41	3
3653	chr8	11134329	11134330	chunk0188_172_1	5.44741	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	11133845	11134342	-134004294	+	L2c	LINE	L2	2817	3329	-58	3
3654	chr8	11738571	11738572	chunk0188_190_1	5.18995	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	11738209	11738798	-133399838	-	L1ME4b	LINE	L1	-15	877	245	3
3655	chr8	6519285	6519286	chunk0188_20_1	5.52722	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	6519182	6519486	-138619150	+	Charlie1a	DNA	hAT-Charlie	1	319	-1136	3
3656	chr8	13187081	13187082	chunk0188_232_1	18.21884	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	13185606	13187083	-131951553	-	L1PA6	LINE	L1	-3978	2206	731	3
3657	chr8	13913441	13913442	chunk0188_245_1	60.625	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	13913346	13913721	-131224915	+	L1MC1	LINE	L1	5586	5932	-401	3
3658	chr8	14478231	14478232	chunk0188_254_1	17.50479	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	14478039	14478610	-130660026	+	L1MC1	LINE	L1	5485	6071	-262	3
3659	chr8	14521542	14521543	chunk0188_255_1	6.48643	AR_DHT_Control	chr8	14521479	14521786	-130616850	-	L1MD1	LINE	L1	-411	6222	5911	3
3660	chr8	14817331	14817332	chunk0188_266_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	14817212	14817635	-130321001	+	L1MA6	LINE	L1	955	1412	-6154	3
3661	chr8	15276405	15276406	chunk0188_273_1	5.18995	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	15273908	15277589	-129861047	+	L1MC1	LINE	L1	2854	6492	-16	3
3662	chr8	15493952	15493953	chunk0188_276_1	101.2684	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr8	15493905	15494161	-129644475	-	MamRTE1	LINE	RTE-BovB	-73	3739	3482	3
3663	chr8	15656990	15656991	chunk0188_290_1	6.26854	AR_DHT_Control	chr8	15656150	15657785	-129480851	-	MLT1A1-int	LTR	ERVL-MaLR	0	1735	2	3
3664	chr8	15684277	15684278	chunk0188_293_1	33.41802	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr8	15678657	15685481	-129453155	-	L1PA17	LINE	L1	-20	6915	3	3
3665	chr8	15702575	15702576	chunk0188_295_1	85.94914	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr8	15702199	15702756	-129435880	-	L3	LINE	CR1	-7	4092	3517	3
3666	chr8	17255795	17255796	chunk0188_315_1	5.18121	AR_DHT_Control	chr8	17255631	17256290	-127882346	-	L1MA4	LINE	L1	-218	7501	6864	3
3667	chr8	17977704	17977705	chunk0188_356_1	6.6351	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	17977664	17978746	-127159890	+	L1MEj	LINE	L1	284	1454	-706	3
3668	chr8	18260843	18260844	chunk0188_377_1	6.0927	AR_DHT_Control	chr8	18260757	18261327	-126877309	+	LTR48B	LTR	ERV1	1	644	0	3
3669	chr8	6850921	6850922	chunk0188_51_1	5.30168	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	6850729	6851820	-138286816	+	(CACACA)n	Simple_repeat	Simple_repeat	1	1102	0	3
3670	chr8	8362262	8362263	chunk0188_69_1	4.73937	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	8359470	8362615	-136776021	-	HERVI-int	LTR	ERV1	-4692	3093	1	3
3671	chr8	8800433	8800434	chunk0188_94_1	29.77432	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	8800413	8800545	-136338091	-	MIR3	SINE	MIR	-13	195	50	3
3672	chr8	22915535	22915536	chunk0189_144_1	54.39499	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	22915407	22915615	-122223021	+	L2b	LINE	L2	3144	3371	-4	3
3673	chr8	23392405	23392406	chunk0189_166_1	8.27376	AR_DHT_Control	chr8	23392325	23392558	-121746078	+	MamGypsy2-I	LTR	Gypsy	2383	2620	-1546	3
3674	chr8	23525868	23525869	chunk0189_174_1	6.00025	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	23525764	23526229	-121612407	-	LTR67B	LTR	ERVL	-148	472	1	3
3675	chr8	23552342	23552343	chunk0189_177_1	5.48709	AR_DHT_Control	chr8	23552251	23552415	-121586221	-	MIRb	SINE	MIR	-14	254	58	3
3676	chr8	24386468	24386469	chunk0189_222_1	11.4186	AR_DHT_Control	chr8	24386375	24386477	-120752159	+	L5	LINE	RTE-X	1810	1912	-353	3
3677	chr8	24458097	24458098	chunk0189_231_1	120.1376	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	24457891	24459446	-120679190	-	L1ME2z	LINE	L1	-1173	4973	3200	3
3678	chr8	24547108	24547109	chunk0189_236_1	8.58634	AR_DHT_Control	chr8	24546900	24547141	-120591495	-	L2c	LINE	L2	-942	2477	2227	3
3679	chr8	24568067	24568068	chunk0189_237_1	8.2993	AR_DHT_Control	chr8	24567695	24568080	-120570556	-	L1MEg	LINE	L1	-5646	589	198	3
3680	chr8	26337741	26337742	chunk0189_325_1	18.09257	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	26337679	26337823	-118800813	+	Charlie4z	DNA	hAT-Charlie	1	158	-9	3
3681	chr8	26852205	26852206	chunk0189_352_1	9.17597	AR_DHT_Control	chr8	26851967	26853105	-118285531	+	L1M6	LINE	L1	2973	4198	-2202	3
3682	chr8	26999753	26999754	chunk0189_360_1	23.1748	AR_DHT_Control	chr8	26999735	26999994	-118138642	-	L1ME1	LINE	L1	-3404	2742	2427	3
3683	chr8	27316499	27316500	chunk0189_374_1	20.6847	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	27316331	27316547	-117822089	+	L1M5	LINE	L1	2166	2390	-3756	3
3684	chr8	27414061	27414062	chunk0189_386_1	103.534	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	27412999	27414247	-117724389	-	L1MC4	LINE	L1	0	8042	6749	3
3685	chr8	27740599	27740600	chunk0189_412_1	43.3411	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	27740558	27740706	-117397930	-	L2a	LINE	L2	-4	3422	3279	3
3686	chr8	28290338	28290339	chunk0189_447_1	76.5226	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	28290315	28290634	-116848002	+	L1MD3	LINE	L1	7676	7995	0	3
3687	chr8	28515645	28515646	chunk0189_457_1	5.52722	AR_DHT_Control	chr8	28515220	28515825	-116622811	-	MER50	LTR	ERV1	-12	722	101	3
3688	chr8	19457011	19457012	chunk0189_7_1	9.55513	AR_DHT_Control	chr8	19456810	19457182	-125681454	+	L3	LINE	CR1	3688	4097	-2	3
3689	chr8	20939155	20939156	chunk0189_74_1	16.25382	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	20939068	20939169	-124199467	+	L2a	LINE	L2	3312	3421	-5	3
3690	chr8	30427402	30427403	chunk0190_111_1	61.60149	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	30427369	30427731	-114710905	+	L2c	LINE	L2	2952	3373	-14	3
3691	chr8	30657019	30657020	chunk0190_131_1	11.4842	AR_DHT_Control	chr8	30656840	30657035	-114481601	-	MIRc	SINE	MIR	-34	234	12	3
3692	chr8	30981215	30981216	chunk0190_148_1	34.95624	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	30979975	30981628	-114157008	+	L1ME1	LINE	L1	4299	6016	-163	3
3693	chr8	31165719	31165720	chunk0190_152_1	19.94026	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	31165389	31165747	-113972889	-	Charlie5	DNA	hAT-Charlie	0	2624	2257	3
3694	chr8	31299305	31299306	chunk0190_158_1	6.80366	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	31299278	31299455	-113839181	+	MER20	DNA	hAT-Charlie	36	219	0	3
3695	chr8	33513503	33513504	chunk0190_191_1	7.16595	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	33513473	33513581	-111625055	+	U13	snRNA	snRNA	1	108	0	3
3696	chr8	28652285	28652286	chunk0190_3_1	9.70003	AR_DHT_Control	chr8	28652060	28652375	-116486261	-	L1MB4	LINE	L1	-388	5792	5485	3
3697	chr8	39099744	39099745	chunk0190_339_1	5.60881	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	39099675	39099806	-106038830	-	L1MA7	LINE	L1	0	6291	6157	3
3698	chr8	39194505	39194506	chunk0190_340_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	39191942	39195268	-105943368	-	L1PA13	LINE	L1	-3733	3033	1	3
3699	chr8	39218443	39218444	chunk0190_341_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	39215476	39219689	-105918947	-	L1MA3	LINE	L1	-3103	4462	160	3
3700	chr8	39237471	39237472	chunk0190_344_1	9.23066	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	39236836	39240503	-105898133	+	L1PB1	LINE	L1	1	3782	-3080	3
3701	chr8	39673031	39673032	chunk0190_354_1	5.77762	AR_DHT_Control	chr8	39671745	39673033	-105465603	+	ERV3-16A3_I-int	LTR	ERVL	730	2173	-2823	3
3702	chr8	39676073	39676074	chunk0190_355_1	5.24411	AR_DHT_Control	chr8	39673612	39676777	-105461859	-	L1P2	LINE	L1	-2985	3334	180	3
3703	chr8	29314567	29314568	chunk0190_36_1	14.7449	AR_DHT_Control	chr8	29313474	29314673	-115823963	+	SATR2	Satellite	Satellite	1	1139	-61	3
3704	chr8	41175824	41175825	chunk0190_417_1	18.8646	AR_DHT_Control	chr8	41175722	41175899	-103962737	+	LTR88b	LTR	Gypsy?	258	445	-392	3
3705	chr8	41442765	41442766	chunk0190_426_1	50.6982	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	41442728	41442871	-103695765	-	MLT1J	LTR	ERVL-MaLR	-2	510	367	3
3706	chr8	41816039	41816040	chunk0190_446_1	6.48857	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	41814376	41816390	-103322246	-	MER34B-int	LTR	ERV1	-1615	3741	1683	3
3707	chr8	42151906	42151907	chunk0190_457_1	5.16739	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	42151843	42152040	-102986596	-	MIR	SINE	MIR	-60	202	2	3
3708	chr8	42245683	42245684	chunk0190_458_1	5.95444	AR_DHT_Control	chr8	42245521	42245710	-102892926	+	LTR84b	LTR	ERVL	541	753	-8	3
3709	chr8	29724494	29724495	chunk0190_60_1	6.60988	AR_DHT_Control	chr8	29724271	29724532	-115414104	+	MER113A	DNA	hAT-Charlie	47	313	-1	3
3710	chr8	29770425	29770426	chunk0190_67_1	69.5787	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr8	29770197	29770431	-115368205	+	MIRb	SINE	MIR	30	268	0	3
3711	chr8	29910448	29910449	chunk0190_74_1	7.22694	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	29909444	29912127	-115226509	+	L1M2	LINE	L1	3	2728	-4121	3
3712	chr8	48008444	48008445	chunk0191_101_1	8.27376	AR_DHT_Control	chr8	48008410	48008446	-97130190	+	(GTGC)n	Simple_repeat	Simple_repeat	1	40	0	3
3713	chr8	49713110	49713111	chunk0191_163_1	10.651	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	49712777	49713396	-95425240	-	L1MDb	LINE	L1	-5617	923	181	3
3714	chr8	51722273	51722274	chunk0191_191_1	7.47392	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	51722201	51722967	-93415669	-	LTR1F1	LTR	ERV1	0	729	1	3
3715	chr8	42338729	42338730	chunk0191_2_1	27.75476	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	42338711	42338751	-102799885	+	(CTTC)n	Simple_repeat	Simple_repeat	1	44	0	3
3716	chr8	52276341	52276342	chunk0191_211_1	6.48643	AR_DHT_Control	chr8	52276307	52276442	-92862194	+	(AC)n	Simple_repeat	Simple_repeat	1	142	0	3
3717	chr8	52588236	52588237	chunk0191_220_1	4.30231	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	52588053	52589528	-92549108	-	L1MEf	LINE	L1	-4232	2408	941	3
3718	chr8	52832251	52832252	chunk0191_233_1	14.6997	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	52831078	52832708	-92305928	-	L1ME3B	LINE	L1	-211	6031	4186	3
3719	chr8	53176862	53176863	chunk0191_246_1	5.36932	AR_DHT_Control	chr8	53176751	53177213	-91961423	-	LTR55	LTR	ERVL?	-16	532	29	3
3720	chr8	42910560	42910561	chunk0191_25_1	160.2561	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	42910412	42910667	-102227969	-	L1ME3	LINE	L1	-60	6102	5823	3
3721	chr8	54065081	54065082	chunk0191_288_1	19.68186	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	54065007	54065082	-91073554	-	MIRb	SINE	MIR	-192	76	5	3
3722	chr8	54087955	54087956	chunk0191_289_1	6.48857	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	54087753	54088344	-91050292	-	LTR10C	LTR	ERV1	0	591	1	3
3723	chr8	54789737	54789738	chunk0191_302_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	54788770	54789785	-90348851	+	L1M3b	LINE	L1	1219	2248	-5248	3
3724	chr8	55569027	55569028	chunk0191_314_1	6.40219	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	55568904	55569095	-89569541	-	MER45B	DNA	hAT-Tip100	-3	1037	757	3
3725	chr8	43056222	43056223	chunk0191_33_1	6.38514	AR_DHT_Control	chr8	43056171	43056229	-102082407	+	(CGCAGCC)n	Simple_repeat	Simple_repeat	1	61	0	3
3726	chr8	56005317	56005318	chunk0191_335_1	11.0326	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	56005086	56005332	-89133304	-	L1MB3	LINE	L1	-241	5942	5832	3
3727	chr8	56435815	56435816	chunk0191_351_1	23.44973	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	56435680	56436456	-88702180	+	L1ME3A	LINE	L1	5699	6161	-12	3
3728	chr8	43099911	43099912	chunk0191_38_1	15.2389	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	43099716	43099932	-102038704	-	L2b	LINE	L2	-1767	1652	1424	3
3729	chr8	43139848	43139849	chunk0191_40_1	5.14476	AR_DHT_Control	chr8	43139805	43139931	-101998705	-	L1M5	LINE	L1	-480	5762	5631	3
3730	chr8	57833075	57833076	chunk0191_428_1	6.6093	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	57832941	57834506	-87304130	-	L1M4a2	LINE	L1	-2457	3689	1887	3
3731	chr8	43305570	43305571	chunk0191_47_1	13.2288	AR_DHT_Control	chr8	43305555	43305683	-101832953	-	Zaphod2	DNA	hAT-Tip100	-3316	208	81	3
3732	chr8	43365878	43365879	chunk0191_48_1	7.63982	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	43363497	43366364	-101772272	+	L1PA12	LINE	L1	520	3268	-4887	3
3733	chr8	47764121	47764122	chunk0191_96_1	7.17788	AR_DHT_Control	chr8	47763672	47764235	-97374401	+	(GT)n	Simple_repeat	Simple_repeat	1	602	0	3
3734	chr8	61725228	61725229	chunk0192_114_1	11.5331	AR_DHT_Control	chr8	61725176	61725302	-83413334	-	L2c	LINE	L2	-9	3378	3243	3
3735	chr8	58385846	58385847	chunk0192_13_1	15.57437	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	58385012	58386024	-86752612	-	L1MC2	LINE	L1	-222	6122	5110	3
3736	chr8	58404142	58404143	chunk0192_15_1	4.33257	AR_DHT_Control	chr8	58403738	58404375	-86734261	+	Tigger17a	DNA	TcMar-Tigger	1	654	0	3
3737	chr8	62729189	62729190	chunk0192_173_1	39.0255	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	62729018	62729586	-82409050	+	L1MC	LINE	L1	5167	5721	-612	3
3738	chr8	62770826	62770827	chunk0192_174_1	7.90506	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	62770672	62771145	-82367491	+	L1M4a1	LINE	L1	687	1141	-1438	3
3739	chr8	62774739	62774740	chunk0192_175_1	10.2385	AR_DHT_Control	chr8	62773872	62779565	-82359071	-	L1MA3	LINE	L1	-1463	6102	254	3
3740	chr8	65246606	65246607	chunk0192_219_1	9.56998	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	65246396	65247110	-79891526	-	HAL1b	LINE	L1	-1687	734	15	3
3741	chr8	65928628	65928629	chunk0192_260_1	14.0461	AR_DHT_Control	chr8	65927675	65928880	-79209756	-	Tigger3b	DNA	TcMar-Tigger	-18	1213	39	3
3742	chr8	66763081	66763082	chunk0192_302_1	20.4438	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	66762539	66763884	-78374752	-	L1MC5	LINE	L1	-254	9050	7753	3
3743	chr8	66818301	66818302	chunk0192_306_1	37.4645	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	66818270	66818303	-78320333	+	(ACAAA)n	Simple_repeat	Simple_repeat	1	33	0	3
3744	chr8	67068751	67068752	chunk0192_319_1	11.3974	AR_DHT_Control	chr8	67068663	67069215	-78069421	+	MER90a	LTR	ERV1	1	610	-4	3
3745	chr8	67110268	67110269	chunk0192_325_1	5.99997	AR_DHT_Control	chr8	67109647	67110282	-78028354	-	MER61F	LTR	ERV1	0	676	1	3
3746	chr8	67452830	67452831	chunk0192_336_1	5.44741	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	67452541	67453683	-77684953	-	L2a	LINE	L2	-1	3425	2180	3
3747	chr8	67542338	67542339	chunk0192_337_1	29.5645	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	67542323	67542526	-77596110	+	Tigger19b	DNA	TcMar-Tigger	135	366	-184	3
3748	chr8	58648847	58648848	chunk0192_34_1	6.25666	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	58647862	58649499	-86489137	+	MSTB-int	LTR	ERVL-MaLR	2	1651	0	3
3749	chr8	68887103	68887104	chunk0192_400_1	44.327	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	68886265	68887265	-76251371	+	L1ME1	LINE	L1	5130	6164	-15	3
3750	chr8	70492284	70492285	chunk0193_10_1	5.69781	AR_DHT_Control	chr8	70492167	70492486	-74646150	-	L1M5	LINE	L1	-1054	5092	4764	3
3751	chr8	70493408	70493409	chunk0193_11_1	17.3852	AR_DHT_Control	chr8	70493333	70493568	-74645068	+	ERVL-int	LTR	ERVL	1692	1923	-3834	3
3752	chr8	74230865	74230866	chunk0193_118_1	56.088	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	74230791	74230929	-70907707	-	MIRb	SINE	MIR	-2	266	118	3
3753	chr8	74250856	74250857	chunk0193_123_1	50.77201	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr8	74250747	74251473	-70887163	-	MamRep605	LTR?	LTR?	-137	712	3	3
3754	chr8	74416377	74416378	chunk0193_134_1	7.40938	AR_DHT_Control	chr8	74415344	74416902	-70721734	+	L1ME1	LINE	L1	2	1643	-5220	3
3755	chr8	74418619	74418620	chunk0193_135_1	50.0184	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	74417790	74419492	-70719144	+	L1ME1	LINE	L1	4949	6693	-202	3
3756	chr8	74740935	74740936	chunk0193_163_1	55.0209	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	74740932	74742094	-70396542	-	Tigger17c	DNA	TcMar-Tigger	-7	1181	1	3
3757	chr8	75833920	75833921	chunk0193_198_1	13.6122	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	75833878	75834995	-69303641	+	L1MC5	LINE	L1	7352	8509	-795	3
3758	chr8	75924009	75924010	chunk0193_201_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	75923709	75927379	-69211257	+	L1PA10	LINE	L1	185	3820	-2641	3
3759	chr8	76255195	76255196	chunk0193_209_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	76254406	76258433	-68880203	+	L1MA4A	LINE	L1	718	4754	-2808	3
3760	chr8	76266610	76266611	chunk0193_210_1	8.59495	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	76266454	76266614	-68872022	+	MIRb	SINE	MIR	22	189	-79	3
3761	chr8	76901342	76901343	chunk0193_248_1	8.58634	AR_DHT_Control	chr8	76896098	76902231	-68236405	-	L1PA6	LINE	L1	0	6327	176	3
3762	chr8	77094667	77094668	chunk0193_267_1	8.03974	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	77094436	77094884	-68043752	-	L1ME4a	LINE	L1	-57	6067	5613	3
3763	chr8	77998555	77998556	chunk0193_302_1	15.44024	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	77996384	77998779	-67139857	+	L1MC1	LINE	L1	3550	5971	-362	3
3764	chr8	78289100	78289101	chunk0193_312_1	10.2986	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	78289065	78289180	-66849456	+	(TA)n	Simple_repeat	Simple_repeat	1	125	0	3
3765	chr8	78544667	78544668	chunk0193_316_1	24.2892	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	78544656	78544707	-66593929	-	MER102c	DNA	hAT-Charlie	0	331	281	3
3766	chr8	78705406	78705407	chunk0193_322_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	78704409	78706703	-66431933	-	L1PA13	LINE	L1	-4331	3832	65	3
3767	chr8	78876673	78876674	chunk0193_325_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	78874061	78877135	-66261501	-	L1PA8A	LINE	L1	-2467	5098	450	3
3768	chr8	78990077	78990078	chunk0193_329_1	16.51226	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	78989966	78990194	-66148442	+	L2c	LINE	L2	3042	3282	-105	3
3769	chr8	79443476	79443477	chunk0193_342_1	147.80948	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	79443171	79443780	-65694856	-	L1M4	LINE	L1	-386	5793	5132	3
3770	chr8	79793806	79793807	chunk0193_348_1	9.21264	AR_DHT_Control	chr8	79793613	79793843	-65344793	+	Tigger7	DNA	TcMar-Tigger	4	241	-2250	3
3771	chr8	79914520	79914521	chunk0193_359_1	12.0825	AR_DHT_Control	chr8	79914191	79914598	-65224038	+	LTR16B1	LTR	ERVL	41	480	0	3
3772	chr8	80487418	80487419	chunk0193_395_1	7.91873	AR_DHT_Control	chr8	80487370	80487475	-64651161	+	(GGC)n	Simple_repeat	Simple_repeat	1	100	0	3
3773	chr8	70469379	70469380	chunk0193_4_1	11.2788	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	70469378	70469533	-74669103	-	MIRb	SINE	MIR	-78	190	40	3
3774	chr8	80908699	80908700	chunk0193_428_1	28.02899	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	80908545	80909441	-64229195	-	L2c	LINE	L2	-51	3336	2337	3
3775	chr8	80941249	80941250	chunk0193_431_1	57.3202	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	80941147	80941603	-64197033	-	L2a	LINE	L2	0	3426	2946	3
3776	chr8	81104493	81104494	chunk0193_442_1	31.90595	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	81104371	81104710	-64033926	+	L2b	LINE	L2	2246	2588	-831	3
3777	chr8	83526444	83526445	chunk0194_103_1	119.5286	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	83526434	83526602	-61612034	+	MLT1J	LTR	ERVL-MaLR	68	234	-278	3
3778	chr8	83602354	83602355	chunk0194_109_1	15.5336	AR_DHT_Control	chr8	83601728	83607573	-61531063	+	L1PA6	LINE	L1	182	6327	0	3
3779	chr8	83958726	83958727	chunk0194_119_1	23.85741	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	83958273	83959172	-61179464	+	L1M1	LINE	L1	3775	4706	-1440	3
3780	chr8	83998934	83998935	chunk0194_123_1	9.5124	AR_DHT_Control	chr8	83998438	83999973	-61138663	-	L1PA15-16	LINE	L1	-3924	2939	1466	3
3781	chr8	84108982	84108983	chunk0194_128_1	51.0672	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	84108912	84109163	-61029473	+	Tigger12	DNA	TcMar-Tigger	2159	2418	-57	3
3782	chr8	84205778	84205779	chunk0194_129_1	7.53305	AR_DHT_Control	chr8	84205776	84206179	-60932457	-	MLT1B	LTR	ERVL-MaLR	0	390	1	3
3783	chr8	85146693	85146694	chunk0194_180_1	158.7957	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	85146659	85147334	-59991302	+	L1M4a1	LINE	L1	1231	2042	-537	3
3784	chr8	85233429	85233430	chunk0194_189_1	52.4713	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	85233427	85233851	-59904785	-	LTR41B	LTR	ERVL	-1	757	335	3
3785	chr8	85876400	85876401	chunk0194_209_1	12.7425	AR_DHT_Control	chr8	85876318	85876479	-59262157	+	L2b	LINE	L2	2977	3158	-217	3
3786	chr8	81654124	81654125	chunk0194_26_1	9.68843	AR_DHT_Control	chr8	81653357	81654833	-63483803	-	L1M5	LINE	L1	-395	5767	4188	3
3787	chr8	86865666	86865667	chunk0194_262_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	86865079	86865794	-58272842	-	LTR1B0	LTR	ERV1	0	742	1	3
3788	chr8	86919405	86919406	chunk0194_263_1	41.3558	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	86919254	86919694	-58218942	-	MER57D	LTR	ERV1	0	411	1	3
3789	chr8	88111005	88111006	chunk0194_308_1	63.0419	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	88110969	88111056	-57027580	-	L2a	LINE	L2	-8	3418	3309	3
3790	chr8	81775526	81775527	chunk0194_31_1	109.6486	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	81775348	81776407	-63362229	-	L1PA14	LINE	L1	-8	6153	5098	3
3791	chr8	88207465	88207466	chunk0194_310_1	7.08133	AR_DHT_Control	chr8	88206927	88209591	-56929045	+	Tigger2	DNA	TcMar-Tigger	1	2715	-3	3
3792	chr8	88897089	88897090	chunk0194_329_1	6.37162	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	88895762	88898257	-56240379	+	L1MA1	LINE	L1	58	2330	-4459	3
3793	chr8	89666859	89666860	chunk0194_359_1	4.81216	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	89666835	89666977	-55471659	+	MIR3	SINE	MIR	49	202	-6	3
3794	chr8	89892511	89892512	chunk0194_366_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	89892183	89898369	-55240267	+	L1MA3	LINE	L1	8	6230	-1335	3
3795	chr8	92605729	92605730	chunk0194_450_1	7.97514	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	92605661	92605779	-52532857	+	MIRb	SINE	MIR	102	229	-39	3
3796	chr8	82130754	82130755	chunk0194_53_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	82129420	82132379	-63006257	+	L1PB1	LINE	L1	1	3096	-3771	3
3797	chr8	81400070	81400071	chunk0194_7_1	9.82028	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	81399927	81400077	-63738559	+	MIR3	SINE	MIR	8	160	-48	3
3798	chr8	82662983	82662984	chunk0194_75_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	82661112	82663873	-62474763	-	L1PA16	LINE	L1	-3902	2951	2	3
3799	chr8	95819828	95819829	chunk0195_164_1	9.38217	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	95819740	95820398	-49318238	-	L1MEg2	LINE	L1	-5452	1000	414	3
3800	chr8	96656728	96656729	chunk0195_190_1	5.24411	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	96656153	96657064	-48481572	-	L1M3b	LINE	L1	-5132	1149	242	3
3801	chr8	96964207	96964208	chunk0195_210_1	65.2845	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	96964173	96964218	-48174418	+	(AC)n	Simple_repeat	Simple_repeat	1	45	0	3
3802	chr8	97765544	97765545	chunk0195_250_1	7.47918	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	97765307	97765566	-47373070	+	L2b	LINE	L2	2911	3170	-205	3
3803	chr8	98591462	98591463	chunk0195_292_1	20.56435	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	98591029	98591485	-46547151	+	MER47B	DNA	TcMar-Tigger	1	418	0	3
3804	chr8	98690599	98690600	chunk0195_297_1	4.63256	AR_DHT_Control	chr8	98689792	98690846	-46447790	+	L1PA17	LINE	L1	4091	5127	-1356	3
3805	chr8	93203145	93203146	chunk0195_30_1	5.42901	AR_DHT_Control	chr8	93199695	93205863	-51932773	-	L1PA6	LINE	L1	-6	6321	175	3
3806	chr8	98768213	98768214	chunk0195_304_1	6.9031	AR_DHT_Control	chr8	98768121	98768243	-46370393	-	MIRb	SINE	MIR	-10	258	132	3
3807	chr8	98978163	98978164	chunk0195_321_1	6.49378	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	98977633	98978716	-46159920	-	MSTD-int	LTR	ERVL-MaLR	-4	1731	590	3
3808	chr8	99176076	99176077	chunk0195_332_1	12.1886	AR_DHT_Control	chr8	99175753	99176137	-45962499	+	Tigger2	DNA	TcMar-Tigger	264	588	-2130	3
3809	chr8	99281466	99281467	chunk0195_337_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	99281333	99281754	-45856882	+	LTR40b	LTR	ERVL	24	462	0	3
3810	chr8	99492218	99492219	chunk0195_344_1	18.6213	AR_DHT_Control	chr8	99491203	99493001	-45645635	-	L1P2	LINE	L1	-4362	1822	5	3
3811	chr8	100177239	100177240	chunk0195_383_1	40.7656	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	100176960	100177748	-44960888	-	Tigger2	DNA	TcMar-Tigger	-1932	786	2	3
3812	chr8	93667211	93667212	chunk0195_55_1	65.3792	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	93667164	93667604	-51471032	+	SATR2	Satellite	Satellite	1	446	-9	3
3813	chr8	92895685	92895686	chunk0195_6_1	14.7397	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	92895335	92896805	-52241831	+	MSTD-int	LTR	ERVL-MaLR	2	1484	-251	3
3814	chr8	93968945	93968946	chunk0195_72_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	93963827	93969969	-51168667	-	L1PA6	LINE	L1	0	6154	1	3
3815	chr8	93969380	93969381	chunk0195_73_1	21.0751	AR_DHT_Control	chr8	93963827	93969969	-51168667	-	L1PA6	LINE	L1	0	6154	1	3
3816	chr8	94223951	94223952	chunk0195_87_1	4.63947	AR_DHT_Control	chr8	94223945	94224198	-50914438	-	MIRb	SINE	MIR	0	268	16	3
3817	chr8	101393622	101393623	chunk0196_1_1	16.36585	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	101393501	101393676	-43744960	-	MIR3	SINE	MIR	-3	205	35	3
3818	chr8	103317091	103317092	chunk0196_113_1	7.47918	AR_DHT_Control	chr8	103316853	103317618	-41821018	-	L2a	LINE	L2	0	3426	2563	3
3819	chr8	104025887	104025888	chunk0196_132_1	27.07845	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	104025733	104026076	-41112560	+	Tigger3a	DNA	TcMar-Tigger	3	348	0	3
3820	chr8	104278692	104278693	chunk0196_136_1	148.0328	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	104278639	104279041	-40859595	-	LOR1-int	LTR	ERV1	-7707	413	1	3
3821	chr8	104305305	104305306	chunk0196_139_1	5.82105	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	104304812	104305521	-40833115	-	MER50	LTR	ERV1	0	734	1	3
3822	chr8	105847733	105847734	chunk0196_171_1	63.2755	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr8	105847278	105848139	-39290497	+	L1M3de	LINE	L1	3	1201	-5452	3
3823	chr8	106186302	106186303	chunk0196_192_1	6.41766	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	106186227	106186420	-38952216	+	MIRb	SINE	MIR	31	249	-19	3
3824	chr8	106583283	106583284	chunk0196_207_1	34.12832	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	106583032	106583448	-38555188	-	MamRep1151	LTR?	LTR?	-8	701	283	3
3825	chr8	107044561	107044562	chunk0196_216_1	6.81252	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	107043320	107045762	-38092874	+	L1PB1	LINE	L1	3725	6150	-1	3
3826	chr8	101520658	101520659	chunk0196_22_1	16.5697	AR_DHT_Control	chr8	101520620	101520997	-43617639	+	L2b	LINE	L2	2815	3187	-200	3
3827	chr8	107922276	107922277	chunk0196_234_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	107921531	107924104	-37214532	+	L1PA13	LINE	L1	3564	6163	0	3
3828	chr8	108243127	108243128	chunk0196_238_1	41.48077	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	108242672	108243348	-36895288	+	L1ME3A	LINE	L1	5260	6030	-143	3
3829	chr8	108445242	108445243	chunk0196_242_1	45.0456	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	108445191	108445279	-36693357	+	MIRc	SINE	MIR	169	266	-2	3
3830	chr8	108772165	108772166	chunk0196_259_1	16.3285	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	108772135	108772256	-36366380	-	L3b	LINE	CR1	-337	4895	4772	3
3831	chr8	108805378	108805379	chunk0196_263_1	17.56345	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	108805129	108805536	-36333100	+	LTR54	LTR	ERV1	13	510	0	3
3832	chr8	109540047	109540048	chunk0196_289_1	13.96181	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	109540006	109540075	-35598561	+	(TCCGCCC)n	Simple_repeat	Simple_repeat	1	62	0	3
3833	chr8	110018791	110018792	chunk0196_309_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	110017697	110018901	-35119735	-	L1M1	LINE	L1	-4788	2778	1560	3
3834	chr8	110651329	110651330	chunk0196_314_1	45.0974	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	110651279	110651582	-34487054	-	L1M5	LINE	L1	-3388	2758	2427	3
3835	chr8	111302048	111302049	chunk0196_323_1	9.21264	AR_DHT_Control	chr8	111302029	111302388	-33836248	-	L1M5	LINE	L1	-1989	4157	3795	3
3836	chr8	112074349	112074350	chunk0196_329_1	6.48643	AR_DHT_Control	chr8	112073527	112075057	-33063579	+	L1M2	LINE	L1	236	1906	-4943	3
3837	chr8	113871933	113871934	chunk0196_336_1	10.0392	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	113871136	113872327	-31266309	-	L1PA10	LINE	L1	0	6168	4969	3
3838	chr8	101829493	101829494	chunk0196_45_1	17.5978	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	101829193	101830278	-43308358	-	Charlie7	DNA	hAT-Charlie	-936	1676	575	3
3839	chr8	102417381	102417382	chunk0196_69_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	102417205	102417507	-42721129	-	LTR16C	LTR	ERVL	0	489	180	3
3840	chr8	103038218	103038219	chunk0196_98_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	103038023	103038473	-42100163	-	MLT1H2	LTR	ERVL-MaLR	0	595	18	3
3841	chr8	119767874	119767875	chunk0197_106_1	31.64617	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	119767206	119767964	-25370672	+	L1PA15-16	LINE	L1	9	720	-6614	3
3842	chr8	120010120	120010121	chunk0197_127_1	5.83706	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	120010053	120010211	-25128425	+	MIRb	SINE	MIR	25	194	-74	3
3843	chr8	121151626	121151627	chunk0197_177_1	11.6878	AR_DHT_Control	chr8	121151602	121152024	-23986612	-	MLT1C	LTR	ERVL-MaLR	0	467	6	3
3844	chr8	121431811	121431812	chunk0197_191_1	35.46925	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	121431805	121431965	-23706671	-	MIRc	SINE	MIR	-13	255	84	3
3845	chr8	122683967	122683968	chunk0197_212_1	21.87545	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	122683589	122684033	-22454603	+	LTR78	LTR	ERV1	855	1300	-4	3
3846	chr8	122708252	122708253	chunk0197_213_1	5.20051	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	122708117	122708574	-22430062	-	L2	LINE	L2	-339	3080	2570	3
3847	chr8	123012232	123012233	chunk0197_225_1	27.01973	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	123012146	123012447	-22126189	+	AluSx3	SINE	Alu	1	299	-12	3
3848	chr8	123107154	123107155	chunk0197_236_1	68.807	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	123106742	123107288	-22031348	-	MER68	LTR	ERVL	0	563	1	3
3849	chr8	123202687	123202688	chunk0197_240_1	33.3013	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	123202681	123202789	-21935847	+	MER112	DNA	hAT-Charlie	5	117	-144	3
3850	chr8	123377679	123377680	chunk0197_245_1	6.23615	AR_DHT_Control	chr8	123377420	123377992	-21760644	-	Charlie29a	DNA	hAT-Charlie	0	719	91	3
3851	chr8	124853441	124853442	chunk0197_316_1	65.5441	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	124853326	124853663	-20284973	+	L1ME4b	LINE	L1	549	892	0	3
3852	chr8	125557058	125557059	chunk0197_352_1	4.88212	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	125557057	125557222	-19581414	+	MER5A1	DNA	hAT-Charlie	1	166	0	3
3853	chr8	125648505	125648506	chunk0197_357_1	4.15945	AR_DHT_Control	chr8	125648135	125648551	-19490085	+	LTR33A_	LTR	ERVL	91	526	-5	3
3854	chr8	125735382	125735383	chunk0197_359_1	5.29288	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	125735168	125735583	-19403053	+	LTR27B	LTR	ERV1	171	594	0	3
3855	chr8	126558534	126558535	chunk0197_371_1	5.90945	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	126558529	126558588	-18580048	+	(CCCCGC)n	Simple_repeat	Simple_repeat	1	60	0	3
3856	chr8	118225699	118225700	chunk0197_41_1	4.88663	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	118225647	118225760	-26912876	-	L2b	LINE	L2	-1	3386	3280	3
3857	chr8	127341759	127341760	chunk0197_420_1	16.88936	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	127341503	127341985	-17796651	+	L2a	LINE	L2	2932	3422	-4	3
3858	chr8	127539145	127539146	chunk0197_437_1	6.67113	AR_DHT_Control	chr8	127539126	127539239	-17599397	-	L2b	LINE	L2	-2	3373	3256	3
3859	chr8	116753759	116753760	chunk0197_5_1	67.8087	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	116753752	116753824	-28384812	+	L2a	LINE	L2	3347	3424	-2	3
3860	chr8	116825666	116825667	chunk0197_6_1	53.1859	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	116825659	116825857	-28312779	-	MARNA	DNA	TcMar-Mariner	-224	362	172	3
3861	chr8	118894358	118894359	chunk0197_71_1	8.5059	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	118893702	118894891	-26243745	-	L1ME4b	LINE	L1	-419	473	1	3
3862	chr8	119338524	119338525	chunk0197_91_1	6.38514	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	119338487	119338748	-25799888	+	L2c	LINE	L2	1426	1698	-1721	3
3863	chr9	111598	111599	chunk0198_1_1	14.611	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	111566	111849	-138282868	+	L1MC5	LINE	L1	8771	9066	-238	4
3864	chr8	130692408	130692409	chunk0198_100_1	5.77445	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	130690450	130692827	-14445809	-	L1P4d	LINE	L1	-3428	4713	2353	3
3865	chr8	130734278	130734279	chunk0198_103_1	50.9075	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	130734176	130734437	-14404199	+	MIR	SINE	MIR	23	263	-5	3
3866	chr8	131836437	131836438	chunk0198_115_1	10.0576	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	131836264	131836499	-13302137	-	LTR78B	LTR	ERV1	-750	546	294	3
3867	chr8	131883008	131883009	chunk0198_119_1	103.68037	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	131877699	131883893	-13254743	-	L1PA6	LINE	L1	-1	6326	174	3
3868	chr8	132440420	132440421	chunk0198_132_1	7.16019	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	132440174	132440486	-12698150	+	L2a	LINE	L2	3042	3372	-54	3
3869	chr8	132731032	132731033	chunk0198_137_1	5.75839	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	132730993	132731140	-12407496	+	MIRb	SINE	MIR	2	168	-100	3
3870	chr8	135291467	135291468	chunk0198_272_1	6.35715	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	135291375	135291942	-9846694	+	MLT2B3	LTR	ERVL	1	544	-10	3
3871	chr8	137925987	137925988	chunk0198_298_1	4.55016	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	137925605	137926366	-7212270	-	LTR41B	LTR	ERVL	0	758	3	3
3872	chr8	140012607	140012608	chunk0198_330_1	6.86162	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	140012541	140012626	-5126010	-	MIR	SINE	MIR	-150	112	13	4
3873	chr8	140198887	140198888	chunk0198_340_1	18.1125	AR_DHT_Control	chr8	140198866	140198943	-4939693	-	L2a	LINE	L2	-1	3425	3348	4
3874	chr8	140404709	140404710	chunk0198_350_1	8.11543	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	140404588	140404731	-4733905	+	L1ME3G	LINE	L1	601	739	-185	4
3875	chr8	140832693	140832694	chunk0198_361_1	4.59852	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	140832614	140832732	-4305904	-	L2	LINE	L2	-722	2697	2582	4
3876	chr8	140946747	140946748	chunk0198_365_1	18.41751	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	140946604	140946804	-4191832	+	L2a	LINE	L2	3089	3305	-121	4
3877	chr8	141056051	141056052	chunk0198_370_1	4.09301	AR_DHT_Control	chr8	141055984	141056150	-4082486	+	MIRb	SINE	MIR	1	186	-82	4
3878	chr8	141378561	141378562	chunk0198_391_1	33.9614	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	141378537	141378630	-3760006	-	MIR3	SINE	MIR	-48	160	63	4
3879	chr8	128523460	128523461	chunk0198_53_1	31.3639	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	128523383	128523583	-16615053	+	MER58A	DNA	hAT-Charlie	1	222	-2	3
3880	chr8	129816437	129816438	chunk0198_66_1	4.59852	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	129816091	129816886	-15321750	-	L1PA16	LINE	L1	-5956	1378	11	3
3881	chr8	130015455	130015456	chunk0198_74_1	4.83532	AR_DHT_Control	chr8	130015406	130015566	-15123070	-	MIRc	SINE	MIR	-117	151	4	3
3882	chr8	130122340	130122341	chunk0198_81_1	6.49378	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	130121812	130122364	-15016272	+	L2a	LINE	L2	2809	3426	0	3
3883	chr8	130203355	130203356	chunk0198_85_1	5.6503	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	130203303	130203442	-14935194	+	MER91A	DNA	hAT-Tip100	4	143	-53	3
3884	chr9	2954553	2954554	chunk0199_101_1	33.3627	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	2954081	2955074	-135439643	+	HAL1b	LINE	L1	1070	2125	-296	4
3885	chr9	3525700	3525701	chunk0199_119_1	6.73937	AR_DHT_Control	chr9	3525640	3525723	-134868994	+	(CA)n	Simple_repeat	Simple_repeat	1	83	0	4
3886	chr9	4914194	4914195	chunk0199_204_1	6.48643	AR_DHT_Control	chr9	4914184	4914493	-133480224	-	AluJr	SINE	Alu	-2	310	1	4
3887	chr9	5038425	5038426	chunk0199_211_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	5038172	5038539	-133356178	+	L1MB7	LINE	L1	3365	3770	-2376	4
3888	chr9	5264227	5264228	chunk0199_222_1	10.5201	AR_DHT_Control	chr9	5264209	5266258	-133128459	-	L1PB4	LINE	L1	-3674	3188	1000	4
3889	chr9	5284952	5284953	chunk0199_223_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	5284799	5285489	-133109228	-	L1M2b	LINE	L1	-6485	724	1	4
3890	chr9	6029509	6029510	chunk0199_257_1	15.8739	AR_DHT_Control	chr9	6029058	6029552	-132365165	-	L1MC5a	LINE	L1	-579	2198	1689	4
3891	chr9	6342296	6342297	chunk0199_268_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	6342011	6342961	-132051756	+	L1MA4	LINE	L1	6	952	-6216	4
3892	chr9	7237723	7237724	chunk0199_318_1	13.92411	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	7237657	7238196	-131156521	+	LTR40a	LTR	ERVL	1	519	0	4
3893	chr9	8547890	8547891	chunk0199_327_1	18.52677	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	8547878	8547965	-129846752	-	L2a	LINE	L2	0	3426	3339	4
3894	chr9	11065131	11065132	chunk0199_339_1	5.73904	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	11064761	11065329	-127329388	+	LTR9A1	LTR	ERV1	1	606	-122	4
3895	chr9	12315524	12315525	chunk0199_351_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	12309511	12315966	-126078751	-	L1PA8	LINE	L1	0	6487	11	4
3896	chr9	12909125	12909126	chunk0199_374_1	5.69226	AR_DHT_Control	chr9	12909092	12909763	-125484954	-	LTR8	LTR	ERV1	-8	683	1	4
3897	chr9	13070928	13070929	chunk0199_380_1	8.96258	AR_DHT_Control	chr9	13070657	13071058	-125323659	+	L1MEc	LINE	L1	22	421	-5981	4
3898	chr9	1140918	1140919	chunk0199_39_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	1140581	1141372	-137253345	-	L1M3b	LINE	L1	-5072	2424	1814	4
3899	chr9	13271934	13271935	chunk0199_395_1	34.6752	AR_DHT_Control	chr9	13271778	13272159	-125122558	+	L1ME1	LINE	L1	5779	6166	-13	4
3900	chr9	13547336	13547337	chunk0199_408_1	8.2993	AR_DHT_Control	chr9	13547253	13547433	-124847284	+	MIRb	SINE	MIR	86	262	-6	4
3901	chr9	2341087	2341088	chunk0199_66_1	44.1493	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	2341038	2341487	-136053230	+	ERVL-E-int	LTR	ERVL	736	1173	-4494	4
3902	chr9	2368051	2368052	chunk0199_68_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	2367187	2372371	-136022346	+	L1MA5A	LINE	L1	63	5202	-1643	4
3903	chr9	18040587	18040588	chunk0200_142_1	5.82105	AR_DHT_Control	chr9	18039987	18040654	-120354063	+	BLACKJACK	DNA	hAT-Blackjack	1	710	-2259	4
3904	chr9	20526670	20526671	chunk0200_207_1	9.99437	AR_DHT_Control	chr9	20526209	20527033	-117867684	-	L1ME3A	LINE	L1	-30	6143	5254	4
3905	chr9	21083625	21083626	chunk0200_247_1	13.2526	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	21083166	21083834	-117310883	-	L1ME3A	LINE	L1	-155	6018	5308	4
3906	chr9	22335685	22335686	chunk0200_280_1	6.13992	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	22335305	22335758	-116058959	-	L2a	LINE	L2	-255	3132	2679	4
3907	chr9	14983811	14983812	chunk0200_30_1	104.6277	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	14983637	14984027	-123410690	+	L1ME4a	LINE	L1	5563	5966	-158	4
3908	chr9	25452969	25452970	chunk0200_352_1	79.9687	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	25452940	25453139	-112941578	-	Tigger17c	DNA	TcMar-Tigger	-979	209	1	4
3909	chr9	25472532	25472533	chunk0200_355_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	25470071	25473165	-112921552	-	L1PA11	LINE	L1	-3685	3896	11	4
3910	chr9	25646879	25646880	chunk0200_360_1	7.42871	AR_DHT_Control	chr9	25646804	25647031	-112747686	-	MIRb	SINE	MIR	-33	235	15	4
3911	chr9	27652819	27652820	chunk0200_421_1	15.3969	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	27652569	27653792	-110740925	+	Tigger3b	DNA	TcMar-Tigger	1	1231	0	4
3912	chr9	29449041	29449042	chunk0200_429_1	60.9689	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	29448961	29449469	-108945248	+	L2c	LINE	L2	2869	3387	0	4
3913	chr9	31869711	31869712	chunk0200_459_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	31865899	31870095	-106524622	-	L1MA5A	LINE	L1	-2437	5125	718	4
3914	chr9	16528772	16528773	chunk0200_93_1	7.78444	AR_DHT_Control	chr9	16528590	16528844	-121865873	+	L1ME3G	LINE	L1	362	598	-326	4
3915	chr9	34773577	34773578	chunk0201_100_1	127.53067	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	34773289	34773630	-103621087	+	L1MC3	LINE	L1	6724	7063	-722	4
3916	chr9	34956213	34956214	chunk0201_103_1	19.8103	AR_DHT_Control	chr9	34956062	34956269	-103438448	+	L2c	LINE	L2	3182	3362	-13	4
3917	chr9	33013289	33013290	chunk0201_14_1	9.14794	AR_DHT_Control	chr9	33013149	33013333	-105381384	-	MIR	SINE	MIR	-2	260	63	4
3918	chr9	35919421	35919422	chunk0201_150_1	84.4828	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	35919388	35919493	-102475224	+	HAL1ME	LINE	L1	2336	2452	-13	4
3919	chr9	35969487	35969488	chunk0201_155_1	30.4061	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	35969081	35969582	-102425135	-	L1MA5	LINE	L1	-841	5302	4798	4
3920	chr9	36282491	36282492	chunk0201_182_1	42.2084	AR_DHT_Control	chr9	36282451	36282850	-102111867	-	LTR75	LTR	ERVL	0	562	124	4
3921	chr9	36567255	36567256	chunk0201_197_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	36567114	36567547	-101827170	+	L2c	LINE	L2	2919	3387	0	4
3922	chr9	37373397	37373398	chunk0201_220_1	6.05516	AR_DHT_Control	chr9	37373126	37373413	-101021304	+	AluJb	SINE	Alu	1	293	-19	4
3923	chr9	37782789	37782790	chunk0201_241_1	144.5463	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	37782738	37783129	-100611588	-	L2c	LINE	L2	0	3387	2956	4
3924	chr9	38495458	38495459	chunk0201_264_1	94.94549	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	38495094	38495591	-99899126	-	MLT2B4	LTR	ERVL	-62	494	1	4
3925	chr9	41229497	41229498	chunk0201_299_1	146.80857	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr9	41229378	41230391	-97164326	+	(TG)n	Simple_repeat	Simple_repeat	1	1071	0	4
3926	chr9	43319469	43319470	chunk0201_314_1	29.8929	AR_DHT_Control;Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	43319379	43322579	-95072138	+	(TTCGA)n	Simple_repeat	Simple_repeat	2	3280	0	4
3927	chr9	43321318	43321319	chunk0201_316_1	18.0019	AR_DHT_Control	chr9	43319379	43322579	-95072138	+	(TTCGA)n	Simple_repeat	Simple_repeat	2	3280	0	4
3928	chr9	43346984	43346985	chunk0201_317_1	7.83042	AR_DHT_Control	chr9	43345451	43347142	-95047575	+	(TCGAT)n	Simple_repeat	Simple_repeat	2	1730	0	4
3929	chr9	62807928	62807929	chunk0201_319_1	66.6228	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	62807905	62807989	-75586728	+	MER103C	DNA	hAT-Charlie	83	165	-132	4
3930	chr9	63807685	63807686	chunk0201_326_1	20.39164	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	63807588	63807724	-74586993	-	MER103C	DNA	hAT-Charlie	-80	217	83	4
3931	chr9	66608338	66608339	chunk0201_346_1	12.3113	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	66608296	66608552	-71786165	-	L1MEg	LINE	L1	-4276	1808	1527	4
3932	chr9	69123001	69123002	chunk0201_392_1	7.0729	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	69122999	69123107	-69271610	+	MER5A1	DNA	hAT-Charlie	41	166	0	4
3933	chr9	69594290	69594291	chunk0201_415_1	8.24382	AR_DHT_Control	chr9	69594203	69594352	-68800365	-	MER5A1	DNA	hAT-Charlie	-3	163	1	4
3934	chr9	69610280	69610281	chunk0201_419_1	46.0688	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	69610035	69610337	-68784380	+	AluJr4	SINE	Alu	1	300	-12	4
3935	chr9	69645598	69645599	chunk0201_420_1	7.62275	AR_DHT_Control	chr9	69645404	69645966	-68748751	+	MLT1N2	LTR	ERVL-MaLR	9	562	0	4
3936	chr9	69942850	69942851	chunk0201_429_1	12.6172	AR_DHT_Control	chr9	69942327	69944094	-68450623	+	L1MB8	LINE	L1	5243	7036	-2	4
3937	chr9	70038261	70038262	chunk0201_433_1	31.1903	SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr9	70038165	70038638	-68356079	+	(TGGAA)n	Simple_repeat	Simple_repeat	1	482	0	4
3938	chr9	32128600	32128601	chunk0201_7_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	32128252	32133068	-106261649	+	L1PA10	LINE	L1	2	4864	-1597	4
3939	chr9	34185896	34185897	chunk0201_72_1	184.5401	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr9	34185872	34186058	-104208659	-	MIRb	SINE	MIR	-74	194	2	4
3940	chr9	34276010	34276011	chunk0201_76_1	11.9502	AR_DHT_Control	chr9	34275956	34276070	-104118647	-	MIRb	SINE	MIR	-140	122	6	4
3941	chr9	72583670	72583671	chunk0202_113_1	10.0617	AR_DHT_Control	chr9	72583528	72583800	-65810917	+	L4_B_Mam	LINE	RTE-X	4564	4834	-107	4
3942	chr9	73510166	73510167	chunk0202_145_1	7.63982	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	73510126	73510210	-64884507	+	L1ME2	LINE	L1	6073	6156	-8	4
3943	chr9	73690123	73690124	chunk0202_156_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	73690018	73690563	-64704154	-	MLT1H1	LTR	ERVL-MaLR	-9	546	1	4
3944	chr9	73701649	73701650	chunk0202_158_1	18.7748	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	73701162	73702303	-64692414	+	L1MB8	LINE	L1	14	1158	-6359	4
3945	chr9	76634474	76634475	chunk0202_239_1	7.10486	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	76634345	76634765	-61759952	+	MER57C2	LTR	ERV1	8	434	0	4
3946	chr9	77063952	77063953	chunk0202_269_1	70.0541	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	77063425	77064154	-61330563	+	Tigger2b_Pri	DNA	TcMar-Tigger	59	777	-291	4
3947	chr9	77180401	77180402	chunk0202_279_1	15.16106	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	77180308	77180872	-61213845	-	L1MD	LINE	L1	-840	5306	4699	4
3948	chr9	77277941	77277942	chunk0202_281_1	112.2903	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	77277259	77277956	-61116761	-	L1MC1	LINE	L1	0	6333	5618	4
3949	chr9	77392557	77392558	chunk0202_284_1	39.11273	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	77392556	77392709	-61002008	-	Tigger1	DNA	TcMar-Tigger	0	2418	2249	4
3950	chr9	77466771	77466772	chunk0202_287_1	16.26733	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	77465909	77467000	-60927717	-	L1M4a2	LINE	L1	-4320	2465	1334	4
3951	chr9	78227798	78227799	chunk0202_314_1	6.67115	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	78227717	78227908	-60166809	-	L1MB8	LINE	L1	-3409	3597	3420	4
3952	chr9	78358463	78358464	chunk0202_324_1	5.20246	AR_DHT_Control	chr9	78357008	78358669	-60036048	+	MER52A	LTR	ERV1	1	1755	0	4
3953	chr9	79782495	79782496	chunk0202_351_1	7.36432	AR_DHT_Control	chr9	79782227	79782768	-58611949	+	LTR16E2	LTR	ERVL	1	568	0	4
3954	chr9	80335300	80335301	chunk0202_361_1	19.4778	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	80333959	80336656	-58058061	+	L1MC1	LINE	L1	3847	6507	-1	4
3955	chr9	80518241	80518242	chunk0202_368_1	26.08767	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	80513438	80518583	-57876134	-	L1PA11	LINE	L1	-4	6355	1124	4
3956	chr9	81122375	81122376	chunk0202_389_1	7.52656	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	81121951	81123301	-57271416	-	MER52A	LTR	ERV1	-199	1556	1	4
3957	chr9	81230405	81230406	chunk0202_394_1	6.84874	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	81230128	81235339	-57159378	-	L1ME1	LINE	L1	-1022	5595	34	4
3958	chr9	81351257	81351258	chunk0202_399_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	81350746	81353039	-57041678	+	L1M1	LINE	L1	2264	4459	-3103	4
3959	chr9	82308254	82308255	chunk0202_447_1	10.65215	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	82308215	82308274	-56086443	+	A-rich	Low_complexity	Low_complexity	1	59	0	4
3960	chr9	82651772	82651773	chunk0203_12_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	82650246	82652179	-55742538	-	L1M1	LINE	L1	-4367	3198	399	4
3961	chr9	85605857	85605858	chunk0203_150_1	6.13915	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	85602598	85606114	-52788603	+	L1MA4A	LINE	L1	15	3630	-3935	4
3962	chr9	85917852	85917853	chunk0203_162_1	8.27376	AR_DHT_Control	chr9	85917795	85918079	-52476638	-	L1M5	LINE	L1	-454	5740	5449	4
3963	chr9	86131676	86131677	chunk0203_178_1	8.0483	AR_DHT_Control	chr9	86131415	86131859	-52262858	+	MLT1J	LTR	ERVL-MaLR	37	510	-2	4
3964	chr9	86170991	86170992	chunk0203_179_1	44.1961	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	86170870	86171011	-52223706	-	L1M4	LINE	L1	-1217	4929	4781	4
3965	chr9	82811092	82811093	chunk0203_19_1	12.3053	AR_DHT_Control	chr9	82811003	82811558	-55583159	+	MER41A	LTR	ERV1	1	554	0	4
3966	chr9	86555901	86555902	chunk0203_205_1	23.32623	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	86555362	86556135	-51838582	+	L1MB5	LINE	L1	5098	5867	-307	4
3967	chr9	86651394	86651395	chunk0203_212_1	9.76623	AR_DHT_Control	chr9	86649324	86652187	-51742530	-	L1MD1	LINE	L1	0	6242	3349	4
3968	chr9	86693429	86693430	chunk0203_216_1	34.213	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	86693363	86694612	-51700105	+	L1MEd	LINE	L1	1580	2926	-3220	4
3969	chr9	87172460	87172461	chunk0203_236_1	10.4004	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	87171398	87172936	-51221781	+	L1MEc	LINE	L1	2386	4575	-1744	4
3970	chr9	88460821	88460822	chunk0203_274_1	6.13915	AR_DHT_Control	chr9	88460440	88460889	-49933828	-	MLT2B1	LTR	ERVL	-7	513	1	4
3971	chr9	89888911	89888912	chunk0203_362_1	37.0368	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	89888775	89888949	-48505768	-	MER58A	DNA	hAT-Charlie	-37	187	5	4
3972	chr9	89906906	89906907	chunk0203_363_1	13.2796	AR_DHT_Control	chr9	89906689	89909182	-48485535	+	L1P2	LINE	L1	605	3089	-3057	4
3973	chr9	89926744	89926745	chunk0203_364_1	13.7592	AR_DHT_Control	chr9	89926502	89926796	-48467921	+	HAL1	LINE	L1	2154	2507	0	4
3974	chr9	90421239	90421240	chunk0203_383_1	68.7178	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	90420207	90422125	-47972592	-	MER76-int	LTR	ERVL	-1681	4508	2440	4
3975	chr9	90457726	90457727	chunk0203_387_1	5.95209	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	90457712	90457909	-47936808	+	L2b	LINE	L2	2960	3156	-219	4
3976	chr9	90573468	90573469	chunk0203_397_1	24.12503	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	90573280	90573488	-47821229	-	HAL1ME	LINE	L1	-16	2449	2237	4
3977	chr9	90842254	90842255	chunk0203_410_1	5.50694	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	90840999	90842747	-47551970	+	(TG)n	Simple_repeat	Simple_repeat	1	1820	0	4
3978	chr9	91711695	91711696	chunk0204_11_1	6.76351	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	91710811	91712132	-46682585	+	(TG)n	Simple_repeat	Simple_repeat	1	1397	0	4
3979	chr9	95121598	95121599	chunk0204_121_1	15.339	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	95121385	95121858	-43272859	+	L1ME3F	LINE	L1	5501	6029	-214	4
3980	chr9	97567569	97567570	chunk0204_228_1	7.86105	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	97567334	97567592	-40827125	-	MamRep38	DNA	hAT	-4	291	13	4
3981	chr9	97735689	97735690	chunk0204_232_1	16.84653	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	97735573	97735698	-40659019	+	MIRc	SINE	MIR	97	241	-27	4
3982	chr9	97950750	97950751	chunk0204_238_1	10.3736	AR_DHT_Control	chr9	97945361	97951518	-40443199	-	L1PA6	LINE	L1	-16	6138	1	4
3983	chr9	98135595	98135596	chunk0204_256_1	45.4492	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	98135549	98135696	-40259021	+	L3	LINE	CR1	3898	4046	-53	4
3984	chr9	98807316	98807317	chunk0204_278_1	15.5201	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	98807264	98807412	-39587305	+	MIRc	SINE	MIR	108	247	-21	4
3985	chr9	100004406	100004407	chunk0204_296_1	4.55016	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	100000454	100004861	-38389856	-	L1M3e	LINE	L1	-2524	5038	460	4
3986	chr9	92436325	92436326	chunk0204_30_1	34.3542	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	92435335	92436918	-45957799	-	L1MD1	LINE	L1	-1	6241	4615	4
3987	chr9	100132164	100132165	chunk0204_302_1	50.0468	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	100132011	100132224	-38262493	+	L2c	LINE	L2	3179	3422	-4	4
3988	chr9	100723874	100723875	chunk0204_325_1	9.08114	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	100723644	100723884	-37670833	-	L2c	LINE	L2	0	3426	3080	4
3989	chr9	101178397	101178398	chunk0204_329_1	4.55016	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	101178020	101179711	-37215006	+	HERVL-int	LTR	ERVL	3933	5654	0	4
3990	chr9	101316013	101316014	chunk0204_330_1	5.99997	AR_DHT_Control	chr9	101315997	101316110	-37078607	-	MIRb	SINE	MIR	-107	161	37	4
3991	chr9	101400229	101400230	chunk0204_340_1	29.25079	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	101400191	101400806	-36993911	+	L2	LINE	L2	257	979	-2440	4
3992	chr9	101510016	101510017	chunk0204_346_1	4.76708	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	101508600	101511314	-36883403	-	Charlie3	DNA	hAT-Charlie	0	2706	26	4
3993	chr9	102840308	102840309	chunk0204_411_1	8.36569	AR_DHT_Control	chr9	102840162	102840434	-35554283	+	MLT1B	LTR	ERVL-MaLR	111	389	-1	4
3994	chr9	92757482	92757483	chunk0204_43_1	11.463	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	92757351	92757544	-45637173	+	L1MC5	LINE	L1	8890	9081	-223	4
3995	chr9	103625198	103625199	chunk0204_432_1	6.48643	AR_DHT_Control	chr9	103625029	103625530	-34769187	-	L2	LINE	L2	-1715	1704	1101	4
3996	chr9	104297357	104297358	chunk0204_449_1	35.64379	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	104297267	104297549	-34097168	+	LTR80A	LTR	ERVL	4	286	-297	4
3997	chr9	104498484	104498485	chunk0204_454_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	104498374	104498782	-33895935	+	L2b	LINE	L2	2938	3382	-5	4
3998	chr9	94294077	94294078	chunk0204_91_1	25.2858	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	94294057	94294157	-44100560	-	L1M5	LINE	L1	-499	5743	5650	4
3999	chr9	94397870	94397871	chunk0204_93_1	36.5631	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	94397532	94398243	-43996474	-	L1MC3	LINE	L1	-174	7611	6849	4
4000	chr9	107687882	107687883	chunk0205_110_1	6.89429	AR_DHT_Control	chr9	107687217	107687986	-30706731	-	Tigger3b	DNA	TcMar-Tigger	-439	792	1	4
4001	chr9	108294632	108294633	chunk0205_148_1	9.55577	AR_DHT_Control	chr9	108294615	108294807	-30099910	-	MIRc	SINE	MIR	-27	241	48	4
4002	chr9	105065476	105065477	chunk0205_16_1	137.9381	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	105065476	105065617	-33329100	-	MIRc	SINE	MIR	-46	184	44	4
4003	chr9	108664619	108664620	chunk0205_164_1	11.79743	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	108664531	108664644	-29730073	+	L2a	LINE	L2	3177	3288	-87	4
4004	chr9	105144189	105144190	chunk0205_20_1	11.142	AR_DHT_Control	chr9	105143969	105144319	-33250398	+	Tigger3a	DNA	TcMar-Tigger	3	348	0	4
4005	chr9	109568598	109568599	chunk0205_218_1	4.06817	AR_DHT_Control	chr9	109567870	109572167	-28822550	+	L1PA15	LINE	L1	284	4793	-1973	4
4006	chr9	111887300	111887301	chunk0205_286_1	6.3364	AR_DHT_Control	chr9	111887080	111887333	-26507384	-	AluJb	SINE	Alu	-18	294	1	4
4007	chr9	111949391	111949392	chunk0205_293_1	6.73207	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	111949199	111949400	-26445317	+	ERVL-B4-int	LTR	ERVL	443	662	-5005	4
4008	chr9	105737694	105737695	chunk0205_39_1	7.42871	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	105736171	105738568	-32656149	-	L1M2a	LINE	L1	-4658	2908	400	4
4009	chr9	114769272	114769273	chunk0205_405_1	5.59693	AR_DHT_Control	chr9	114769232	114769573	-23625144	+	(TG)n	Simple_repeat	Simple_repeat	1	347	0	4
4010	chr9	114969460	114969461	chunk0205_413_1	81.66365	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	114969398	114969875	-23424842	+	MLT1J	LTR	ERVL-MaLR	5	499	-13	4
4011	chr9	114996339	114996340	chunk0205_419_1	66.608	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	114996328	114996474	-23398243	-	MIRc	SINE	MIR	-40	228	58	4
4012	chr9	115485071	115485072	chunk0205_448_1	23.50874	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	115484592	115485114	-22909603	+	L1ME4b	LINE	L1	348	878	-14	4
4013	chr9	106091365	106091366	chunk0205_49_1	7.83221	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	106091201	106091790	-32302927	-	L1ME5	LINE	L1	-328	5866	5255	4
4014	chr9	120890010	120890011	chunk0206_115_1	10.2697	AR_DHT_Control	chr9	120889941	120890035	-17504682	+	MIRc	SINE	MIR	120	241	-27	4
4015	chr9	121189930	121189931	chunk0206_142_1	23.6025	AR_DHT_Control	chr9	121189805	121190012	-17204705	+	Tigger19b	DNA	TcMar-Tigger	210	434	-116	4
4016	chr9	121610474	121610475	chunk0206_159_1	5.17077	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	121610324	121610565	-16784152	-	MIR	SINE	MIR	-2	260	2	4
4017	chr9	122996809	122996810	chunk0206_195_1	6.6351	AR_DHT_Control	chr9	122996790	122996939	-15397778	+	MIRc	SINE	MIR	118	268	0	4
4018	chr9	123208834	123208835	chunk0206_212_1	10.1791	AR_DHT_Control	chr9	123208802	123209173	-15185544	-	L1MEc	LINE	L1	-5942	458	56	4
4019	chr9	123746062	123746063	chunk0206_248_1	115.6446	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	123746044	123746182	-14648535	+	L1ME3B	LINE	L1	6101	6231	-11	4
4020	chr9	124038513	124038514	chunk0206_268_1	81.3881	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	124038493	124038598	-14356119	-	L1MC5a	LINE	L1	-9	2768	2667	4
4021	chr9	124639150	124639151	chunk0206_296_1	14.6688	AR_DHT_Control	chr9	124639027	124639262	-13755455	-	MIR	SINE	MIR	-1	261	18	4
4022	chr9	115591974	115591975	chunk0206_3_1	5.36932	AR_DHT_Control	chr9	115591853	115592158	-22802559	+	AluJr	SINE	Alu	1	312	0	4
4023	chr9	125797559	125797560	chunk0206_361_1	33.1687	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	125797553	125797795	-12596922	-	L1MA9	LINE	L1	-38	6274	6035	4
4024	chr9	126204925	126204926	chunk0206_374_1	4.76708	AR_DHT_Control	chr9	126204548	126205375	-12189342	+	(TG)n	Simple_repeat	Simple_repeat	1	859	0	4
4025	chr9	126725861	126725862	chunk0206_382_1	30.47881	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	126725656	126726474	-11668243	-	L1ME3C	LINE	L1	-88	6035	5204	4
4026	chr9	126985334	126985335	chunk0206_390_1	5.98931	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	126985300	126985429	-11409288	+	MLT1H	LTR	ERVL-MaLR	319	539	-10	4
4027	chr9	127540603	127540604	chunk0206_418_1	14.42979	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	127540477	127540693	-10854024	-	MIRb	SINE	MIR	-30	238	21	4
4028	chr9	127822341	127822342	chunk0206_433_1	74.04593	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	127822222	127822821	-10571896	+	L1ME4c	LINE	L1	312	726	-104	4
4029	chr9	127914011	127914012	chunk0206_437_1	7.58304	AR_DHT_Control	chr9	127913971	127914104	-10480613	+	AluSx	SINE	Alu	175	303	-9	4
4030	chr9	128074723	128074724	chunk0206_448_1	22.7654	AR_DHT_Control	chr9	128074426	128074730	-10319987	+	AluSx	SINE	Alu	1	308	-4	4
4031	chr9	128378675	128378676	chunk0206_455_1	6.93299	AR_DHT_Control	chr9	128378672	128378970	-10015747	+	AluSz6	SINE	Alu	1	306	-6	4
4032	chr9	117466531	117466532	chunk0206_46_1	5.54137	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	117466520	117467228	-20927489	-	L1ME3G	LINE	L1	-218	706	2	4
4033	chr9	117599024	117599025	chunk0206_50_1	5.73594	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	117598399	117599821	-20794896	+	L1MA5	LINE	L1	643	1996	-5172	4
4034	chr9	120620569	120620570	chunk0206_90_1	6.35432	AR_DHT_Control	chr9	120620360	120620846	-17773871	-	L2c	LINE	L2	-1	3386	2915	4
4035	chr9	129836484	129836485	chunk0207_152_1	7.37742	AR_DHT_Control	chr9	129836479	129836521	-8558196	+	L2b	LINE	L2	3321	3364	-11	4
4036	chr9	131897659	131897660	chunk0207_230_1	30.3818	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	131897438	131897779	-6496938	+	L1MC5	LINE	L1	8950	9300	-4	4
4037	chr9	132309220	132309221	chunk0207_265_1	61.9112	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	132309162	132309413	-6085304	+	L1M5	LINE	L1	4712	4971	-1175	4
4038	chr9	132358139	132358140	chunk0207_267_1	36.1122	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	132357970	132358152	-6036565	-	L1M4	LINE	L1	-1413	5231	5058	4
4039	chr9	132373371	132373372	chunk0207_270_1	5.6503	AR_DHT_Control	chr9	132373314	132373383	-6021334	+	L2b	LINE	L2	3297	3365	-10	4
4040	chr9	134182991	134182992	chunk0207_322_1	19.93498	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	134182440	134183092	-4211625	+	(TG)n	Simple_repeat	Simple_repeat	1	714	0	4
4041	chr9	136051936	136051937	chunk0207_379_1	4.83636	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	136051876	136051939	-2342778	+	(AGG)n	Simple_repeat	Simple_repeat	1	64	0	4
4042	chr9	136631306	136631307	chunk0207_392_1	5.61501	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	136630736	136631565	-1763152	+	(ACAC)n	Simple_repeat	Simple_repeat	1	831	0	4
4043	chr9	136797247	136797248	chunk0207_400_1	10.9604	AR_DHT_Control	chr9	136796532	136797430	-1597287	+	LTR5B	LTR	ERVK	1	913	-89	4
4044	chr9	136944647	136944648	chunk0207_404_1	5.38748	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	136944598	136944684	-1450033	+	(CCGCCC)n	Simple_repeat	Simple_repeat	1	86	0	4
4045	chr9	137390597	137390598	chunk0207_434_1	25.5624	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	137390497	137390629	-1004088	-	MIR	SINE	MIR	-44	218	73	4
4046	chrX	6982237	6982238	chunk0207_44_1	9.21264	AR_DHT_Control	chrX	6982212	6982896	-149057999	-	LTR8A	LTR	ERV1	0	727	5	4
4047	chr9	138004066	138004067	chunk0207_462_1	4.83274	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	138003921	138004265	-390452	+	L1ME3Cz	LINE	L1	171	596	-328	4
4048	chrX	10036451	10036452	chunk0208_1_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chrX	10036340	10036595	-146004300	-	L1MB5	LINE	L1	-15	6159	5937	4
4049	chrX	19981549	19981550	chunk0208_239_1	38.33489	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	19981429	19982052	-136058843	+	L1MB7	LINE	L1	5488	6175	-9	4
4050	chrX	27512802	27512803	chunk0208_372_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	27512694	27513424	-128527471	+	L1MA6	LINE	L1	4612	5325	-818	4
4051	chrX	29989807	29989808	chunk0208_429_1	49.7448	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	29989618	29990695	-126050200	-	L1MA3	LINE	L1	-2252	5313	4222	4
4052	chrX	31316403	31316404	chunk0208_443_1	27.6777	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	31316352	31316421	-124724474	-	L2a	LINE	L2	-4	3422	3351	4
4053	chrX	12934601	12934602	chunk0208_77_1	4.83532	AR_DHT_Control	chrX	12934505	12934620	-143106275	+	L2c	LINE	L2	3283	3382	-5	4
4054	chrX	12965577	12965578	chunk0208_78_1	19.7868	AR_DHT_Control	chrX	12965244	12965974	-143074921	-	MER77B	LTR	ERVL	-170	698	1	4
4055	chrX	13002433	13002434	chunk0208_80_1	7.36432	AR_DHT_Control	chrX	13001605	13002496	-143038399	+	Tigger3b	DNA	TcMar-Tigger	295	1230	-1	4
4056	chrX	40943549	40943550	chunk0209_127_1	13.2288	AR_DHT_Control	chrX	40943527	40943933	-115096962	+	LTR40b	LTR	ERVL	62	460	-2	4
4057	chrX	41572999	41573000	chunk0209_136_1	17.32118	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	41572248	41573064	-114467831	-	L1ME1	LINE	L1	-3872	2447	1516	4
4058	chrX	41614393	41614394	chunk0209_137_1	31.1709	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	41614384	41614511	-114426384	-	L1MD1	LINE	L1	-318	5924	5748	4
4059	chrX	35380163	35380164	chunk0209_16_1	16.36155	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	35378871	35381570	-120659325	-	L1PA15-16	LINE	L1	-3113	4201	1624	4
4060	chrX	43865377	43865378	chunk0209_192_1	8.58634	AR_DHT_Control	chrX	43864994	43865594	-112175301	+	L1MB7	LINE	L1	5588	6183	-1	4
4061	chrX	44686532	44686533	chunk0209_212_1	55.4018	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	44686465	44686607	-111354288	+	L2a	LINE	L2	3256	3413	-13	4
4062	chrX	35665029	35665030	chunk0209_23_1	18.7412	AR_DHT_Control	chrX	35664744	35665153	-120375742	-	MER92A	LTR	ERV1	0	412	1	4
4063	chrX	45302745	45302746	chunk0209_237_1	7.87682	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	45302606	45305539	-110735356	+	MER4-int	LTR	ERV1	1463	5347	-1251	4
4064	chrX	47619930	47619931	chunk0209_286_1	9.44294	SRA057177_Lncap_AR_DHT_10nm_4hr	chrX	47619917	47619966	-108420929	+	(CGCGG)n	Simple_repeat	Simple_repeat	1	51	0	4
4065	chrX	48626926	48626927	chunk0209_298_1	12.1886	AR_DHT_Control	chrX	48626777	48626937	-107413958	-	FRAM	SINE	Alu	-17	159	1	4
4066	chrX	49003919	49003920	chunk0209_305_1	66.70047	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	49003689	49004063	-107036832	-	L1ME2	LINE	L1	-4	6330	5799	4
4067	chrX	49699991	49699992	chunk0209_308_1	10.1791	AR_DHT_Control	chrX	49699564	49700301	-106340594	-	L1MB7	LINE	L1	-54	6130	5323	4
4068	chrX	53325039	53325040	chunk0209_357_1	5.55081	AR_DHT_Control	chrX	53324863	53325052	-102715843	-	MIR	SINE	MIR	-2	260	77	4
4069	chrX	56920463	56920464	chunk0209_416_1	105.498	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	56915290	56921294	-99119601	-	L1PA6	LINE	L1	-27	6127	4	4
4070	chrX	56946259	56946260	chunk0209_417_1	5.18995	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	56942421	56948173	-99092722	+	HERVK11-int	LTR	ERVK	970	6765	-1188	4
4071	chrX	59487610	59487611	chunk0209_429_1	14.6381	Merged_Lncap_AR_Veh	chrX	59487536	59487694	-96553201	-	BSR/Beta	Satellite	Satellite	-9	158	1	4
4072	chrX	36583013	36583014	chunk0209_43_1	9.06209	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	36583006	36583275	-119457620	-	L5	LINE	RTE-X	-1772	493	220	4
4073	chrX	37368123	37368124	chunk0209_60_1	21.52394	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	37368016	37369374	-118671521	-	L1MCb	LINE	L1	-3329	3235	1834	4
4074	chrX	72046405	72046406	chunk0210_105_1	50.15339	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	72046385	72046506	-83994389	+	MIR	SINE	MIR	114	236	-32	4
4075	chrX	74181520	74181521	chunk0210_128_1	63.6656	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	74181043	74182015	-81858880	+	HERVK3-int	LTR	ERVK	6225	7200	-2	4
4076	chrX	74696447	74696448	chunk0210_142_1	9.21264	AR_DHT_Control	chrX	74695718	74701870	-81339025	+	L1PA6	LINE	L1	4	6154	0	4
4077	chrX	75351914	75351915	chunk0210_145_1	15.3744	AR_DHT_Control	chrX	75351839	75352294	-80688601	-	L1PA7	LINE	L1	-4749	2036	1589	4
4078	chrX	80320080	80320081	chunk0210_197_1	10.1791	AR_DHT_Control	chrX	80319278	80321315	-75719580	+	L1PA6	LINE	L1	180	2168	-4189	4
4079	chrX	81302022	81302023	chunk0210_215_1	9.21264	AR_DHT_Control	chrX	81301868	81302672	-74738223	-	L1MB7	LINE	L1	-1305	5701	4929	4
4080	chrX	82316136	82316137	chunk0210_220_1	5.86499	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	82315759	82316409	-73724486	+	L1MD	LINE	L1	4670	5339	-807	4
4081	chrX	82398669	82398670	chunk0210_229_1	58.1821	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	82398537	82399726	-73641169	+	Tigger3b	DNA	TcMar-Tigger	3	1231	0	4
4082	chrX	82682349	82682350	chunk0210_234_1	35.4849	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	82681639	82682655	-73358240	+	L1PA16	LINE	L1	5126	6165	-1	4
4083	chrX	82718391	82718392	chunk0210_240_1	3.97649	AR_DHT_Control	chrX	82718296	82718703	-73322192	-	MLT1B	LTR	ERVL-MaLR	0	390	1	4
4084	chrX	84266891	84266892	chunk0210_271_1	38.3034	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	84265679	84268020	-71772875	-	L1P2	LINE	L1	-3824	2495	178	4
4085	chrX	84959465	84959466	chunk0210_285_1	9.06209	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	84959184	84959801	-71081094	+	LTR10C	LTR	ERV1	1	591	0	4
4086	chrX	85598329	85598330	chunk0210_286_1	8.27376	AR_DHT_Control	chrX	85598127	85599863	-70441032	+	L1PB1	LINE	L1	5098	6863	-4	4
4087	chrX	90459184	90459185	chunk0210_311_1	8.03974	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	90459143	90459266	-65581629	-	LTR35B	LTR	ERV1	-485	120	1	4
4088	chrX	91395529	91395530	chunk0210_315_1	61.1753	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	91394564	91395567	-64645328	-	L1MCa	LINE	L1	-5038	1713	627	4
4089	chrX	96179709	96179710	chunk0210_348_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	96179624	96179840	-59861055	-	L1PB4	LINE	L1	-113	6043	5831	4
4090	chrX	96308528	96308529	chunk0210_352_1	12.3113	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	96308257	96310168	-59730727	+	L1MC2	LINE	L1	4522	6333	-11	4
4091	chrX	97894874	97894875	chunk0210_389_1	16.4778	AR_DHT_Control	chrX	97894415	97894991	-58145904	-	L1MA1	LINE	L1	-10	6292	5709	4
4092	chrX	100980969	100980970	chunk0210_417_1	9.21264	AR_DHT_Control	chrX	100978152	100981525	-55059370	-	L1MA3	LINE	L1	-3438	4127	162	4
4093	chrX	102534586	102534587	chunk0210_424_1	8.27376	AR_DHT_Control	chrX	102531877	102534835	-53506060	+	L1M1	LINE	L1	13	3180	-4385	4
4094	chrX	103658925	103658926	chunk0210_435_1	28.7205	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	103658863	103659514	-52381381	-	MER66-int	LTR	ERV1	-5581	1095	400	4
4095	chrX	104165961	104165962	chunk0210_442_1	24.5648	AR_DHT_Control	chrX	104165790	104166000	-51874895	-	L2c	LINE	L2	-179	3196	2972	4
4096	chrX	106042413	106042414	chunk0210_447_1	12.55427	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	106041795	106043506	-49997389	+	ERVL-E-int	LTR	ERVL	3721	5499	-168	4
4097	chrX	107536530	107536531	chunk0210_465_1	98.83702	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chrX	107536372	107536781	-48504114	-	L1MD2	LINE	L1	-443	5916	5542	4
4098	chrX	68933168	68933169	chunk0210_53_1	8.8907	AR_DHT_Control	chrX	68933023	68933233	-87107662	+	MIR	SINE	MIR	5	212	-50	4
4099	chrX	68959941	68959942	chunk0210_54_1	21.024	AR_DHT_Control	chrX	68959444	68960655	-87080240	-	L1MD2	LINE	L1	-54	6305	5046	4
4100	chrX	69425200	69425201	chunk0210_61_1	7.36432	AR_DHT_Control	chrX	69425157	69425353	-86615542	+	Charlie17a	DNA	hAT-Charlie	1	217	0	4
4101	chrX	69947355	69947356	chunk0210_67_1	7.97158	AR_DHT_Control	chrX	69947191	69947796	-86093099	-	MamRTE1	LINE	RTE-BovB	-1	3811	3170	4
4102	chrX	70172469	70172470	chunk0210_77_1	14.7725	AR_DHT_Control	chrX	70172390	70172500	-85868395	+	L1ME4b	LINE	L1	772	882	-10	4
4103	chrX	71093606	71093607	chunk0210_89_1	12.1886	AR_DHT_Control	chrX	71093476	71093798	-84947097	-	L2c	LINE	L2	-90	3297	2934	4
4104	chrX	111988583	111988584	chunk0211_114_1	6.48643	AR_DHT_Control	chrX	111988577	111988695	-44052200	+	L2c	LINE	L2	3282	3385	-2	4
4105	chrX	112551105	112551106	chunk0211_126_1	18.27473	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	112550925	112551894	-43489001	-	L1PA6	LINE	L1	-5218	966	5	4
4106	chrX	113073246	113073247	chunk0211_143_1	7.36432	AR_DHT_Control	chrX	113073143	113073473	-42967422	+	L2c	LINE	L2	3063	3367	-8	4
4107	chrX	115030817	115030818	chunk0211_165_1	18.21884	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	115030514	115030874	-41010021	+	MLT1J	LTR	ERVL-MaLR	1	365	-147	4
4108	chrX	107778898	107778899	chunk0211_20_1	8.27376	AR_DHT_Control	chrX	107778758	107778995	-48261900	-	L2c	LINE	L2	-4	3383	3130	4
4109	chrX	118208007	118208008	chunk0211_207_1	17.08345	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	118207670	118208013	-37832882	+	L2c	LINE	L2	3069	3384	-3	4
4110	chrX	118928499	118928500	chunk0211_233_1	8.27376	AR_DHT_Control	chrX	118928399	118928509	-37112386	+	LTR75	LTR	ERVL	26	142	-420	4
4111	chrX	107972617	107972618	chunk0211_27_1	6.48643	AR_DHT_Control	chrX	107972587	107972779	-48068116	-	L2b	LINE	L2	-8	3418	3222	4
4112	chrX	121655470	121655471	chunk0211_272_1	32.7612	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	121654924	121655494	-34385401	-	MER76	LTR	ERVL	-33	658	1	4
4113	chrX	121689489	121689490	chunk0211_274_1	45.9526	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	121689326	121689809	-34351086	-	L1MB1	LINE	L1	-36	6132	5658	4
4114	chrX	123906782	123906783	chunk0211_324_1	14.2911	AR_DHT_Control	chrX	123906562	123906935	-32133960	+	L2c	LINE	L2	3039	3383	-4	4
4115	chrX	124307581	124307582	chunk0211_339_1	24.4287	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	124307446	124307714	-31733181	-	L2c	LINE	L2	-153	3234	2969	4
4116	chrX	127806398	127806399	chunk0211_386_1	5.18995	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	127806231	127806440	-28234455	-	Tigger19b	DNA	TcMar-Tigger	-233	317	103	4
4117	chrX	128104493	128104494	chunk0211_389_1	27.2812	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	128104459	128104777	-27936118	-	L1PA16	LINE	L1	-9	6157	5822	4
4118	chrX	128961559	128961560	chunk0211_417_1	87.8049	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	128960366	128961577	-27079318	-	L2c	LINE	L2	-214	3161	1929	4
4119	chrX	108572801	108572802	chunk0211_44_1	38.1292	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	108572071	108573352	-47467543	+	L2a	LINE	L2	2036	3424	-2	4
4120	chrX	130166967	130166968	chunk0211_455_1	16.27964	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	130166960	130167112	-25873783	-	L2b	LINE	L2	-113	3262	3100	4
4121	chrX	130878151	130878152	chunk0212_122_1	21.21057	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	130878008	130878171	-25162724	-	UCON55	DNA	TcMar-Tigger	0	192	8	4
4122	chrX	131921201	131921202	chunk0212_149_1	17.48052	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	131919866	131921285	-24119610	+	L1MA3	LINE	L1	1756	3229	-4336	4
4123	chrX	134591499	134591500	chunk0212_204_1	42.8877	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	134591455	134592330	-21448565	-	L1MDa	LINE	L1	-475	6275	5347	4
4124	chrX	136012129	136012130	chunk0212_218_1	6.92922	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	136012113	136012142	-20028753	+	MIR3	SINE	MIR	176	201	-7	4
4125	chrY	10793075	10793076	chunk0212_25_1	12.2311	SRA057177_Lncap_AR_DHT_10nm_4hr	chrY	10792914	10794064	-46433351	+	(ATTCC)n	Simple_repeat	Simple_repeat	5	1158	0	4
4126	chrY	10852619	10852620	chunk0212_26_1	10.2385	SRA057177_Lncap_AR_DHT_10nm_4hr	chrY	10852205	10852803	-46374612	+	(TCCAT)n	Simple_repeat	Simple_repeat	3	602	0	4
4127	chrY	10880885	10880886	chunk0212_28_1	27.03053	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chrY	10880585	10881313	-46346102	+	(TCCAT)n	Simple_repeat	Simple_repeat	2	733	0	4
4128	chrY	10907708	10907709	chunk0212_29_1	45.7717	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrY	10902341	10908519	-46318896	-	BSR/Beta	Satellite	Satellite	-14	6148	1	4
4129	chrX	142245905	142245906	chunk0212_303_1	32.84649	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	142245446	142248184	-13792711	+	L1MA9	LINE	L1	4555	7157	-115	4
4130	chrX	142275983	142275984	chunk0212_305_1	60.3291	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	142273981	142275985	-13764910	-	Tigger1	DNA	TcMar-Tigger	-424	1994	1	4
4131	chrX	142484239	142484240	chunk0212_307_1	6.48643	AR_DHT_Control	chrX	142484063	142484338	-13556557	+	LTR101_Mam	LTR	ERVL	542	829	0	4
4132	chrX	143938248	143938249	chunk0212_322_1	9.21264	AR_DHT_Control	chrX	143937278	143938580	-12102315	+	L1MA2	LINE	L1	4988	6304	0	4
4133	chrY	11099720	11099721	chunk0212_33_1	15.54263	Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr	chrY	11096517	11103153	-46124262	-	GSATII	Satellite	centr	-32	6875	1	4
4134	chrY	11281616	11281617	chunk0212_36_1	30.3595	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chrY	11281373	11281813	-45945602	-	MER21C	LTR	ERVL	-22	916	457	4
4135	chrX	152100991	152100992	chunk0212_414_1	5.6425	AR_DHT_Control	chrX	152099780	152101691	-3939204	+	L1MD2	LINE	L1	3055	5037	-1507	4
4136	chrX	154047239	154047240	chunk0212_435_1	30.74252	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chrX	154046472	154047404	-1993491	+	HAL1b	LINE	L1	377	1410	-1011	4
4137	chrY	11310309	11310310	chunk0212_47_1	30.7867	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrY	11308882	11314125	-45913290	+	BSR/Beta	Satellite	Satellite	1	5233	0	4
4138	chrY	11311712	11311713	chunk0212_49_1	26.1415	SRA057177_Lncap_AR_DHT_10nm_4hr	chrY	11308882	11314125	-45913290	+	BSR/Beta	Satellite	Satellite	1	5233	0	4
4139	chrY	11312471	11312472	chunk0212_51_1	21.91485	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrY	11308882	11314125	-45913290	+	BSR/Beta	Satellite	Satellite	1	5233	0	4
4140	chrY	11325852	11325853	chunk0212_61_1	52.3162	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrY	11323527	11331204	-45896211	+	BSR/Beta	Satellite	Satellite	1	7647	0	4
4141	chrY	11329000	11329001	chunk0212_64_1	9.60402	AR_DHT_Control	chrY	11323527	11331204	-45896211	+	BSR/Beta	Satellite	Satellite	1	7647	0	4
4142	chrY	11329752	11329753	chunk0212_66_1	21.91021	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chrY	11323527	11331204	-45896211	+	BSR/Beta	Satellite	Satellite	1	7647	0	4
4143	chrY	11531879	11531880	chunk0212_76_1	68.6673	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chrY	11500536	11557169	-45670246	+	(AATGGAATGG)n	Simple_repeat	Simple_repeat	1	57605	0	4
4144	chrY	11534146	11534147	chunk0212_77_1	23.0237	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chrY	11500536	11557169	-45670246	+	(AATGGAATGG)n	Simple_repeat	Simple_repeat	1	57605	0	4
4145	chrY	11539328	11539329	chunk0212_79_1	96.1625	SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr	chrY	11500536	11557169	-45670246	+	(AATGGAATGG)n	Simple_repeat	Simple_repeat	1	57605	0	4
4146	chrY	11730913	11730914	chunk0212_85_1	16.5991	Merged_Lncap_AR_Veh	chrY	11721515	11749523	-45477892	+	(GAATG)n	Satellite	Satellite	1	28038	0	4
4147	chrY	11749058	11749059	chunk0212_86_1	14.7184	SRA057177_Lncap_AR_DHT_10nm_4hr	chrY	11721515	11749523	-45477892	+	(GAATG)n	Satellite	Satellite	1	28038	0	4
4148	chrY	26663710	26663711	chunk0213_24_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chrY	26660608	26663734	-30563681	+	(AATGG)n	Simple_repeat	Simple_repeat	3	3141	0	4
4149	chrY	56728081	56728082	chunk0213_27_1	79.4428	SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr	chrY	56673415	56771507	-455908	+	(AATGGAATGG)n	Simple_repeat	Simple_repeat	1	97964	0	4
4150	chrY	56742715	56742716	chunk0213_30_1	21.4074	SRA057177_Lncap_AR_DHT_10nm_4hr	chrY	56673415	56771507	-455908	+	(AATGGAATGG)n	Simple_repeat	Simple_repeat	1	97964	0	4
4151	chrY	56763520	56763521	chunk0213_31_1	44.634	SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chrY	56673415	56771507	-455908	+	(AATGGAATGG)n	Simple_repeat	Simple_repeat	1	97964	0	4
4152	chrY	56839420	56839421	chunk0213_32_1	69.5226	Merged_Lncap_AR_Veh;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chrY	56837123	56851635	-375780	-	BSR/Beta	Satellite	Satellite	-3	14452	1	4
4153	chrY	19645067	19645068	chunk0213_6_1	25.3785	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chrY	19644408	19645552	-37581863	-	L1PA6	LINE	L1	-4706	1478	305	4