Homer de novo Motif Results (homer_results/LNCaP_FOXA1_DHT100nm_rep1/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 107523
Total background sequences = 107468
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A G C T C T A G A G C T A C G T C A G T C T G A A G T C G C T A A G T C C G T A 1e-2065-4.757e+0325.11%13.88%55.3bp (57.7bp)FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer(0.968)
More Information | Similar Motifs Found
motif file (matrix)
2 T G A C A C G T A C T G A G T C A G T C C G T A C T G A T G C A 1e-305-7.030e+0216.11%12.22%68.8bp (77.5bp)NFIA/MA0670.1/Jaspar(0.911)
More Information | Similar Motifs Found
motif file (matrix)
3 C G T A C G T A C G A T A G C T C G A T C G A T C G T A A G C T C G A T A C T G A T C G T G A C 1e-208-4.791e+027.69%5.43%55.8bp (56.1bp)HOXB13/MA0901.2/Jaspar(0.942)
More Information | Similar Motifs Found
motif file (matrix)
4 G A C T A T G C T A G C C T G A G A C T C A G T A T G C A T G C C G T A G A C T A C G T T A G C 1e-186-4.298e+020.20%0.01%54.3bp (46.8bp)TEAD3(TEA)/HepG2-TEAD3-ChIP-Seq(Encode)/Homer(0.691)
More Information | Similar Motifs Found
motif file (matrix)
5 G A T C A G C T A G C T A G C T G T A C A G T C T C G A C T A G A C T G T C A G 1e-151-3.483e+0228.78%25.25%55.5bp (56.4bp)STAT3/MA0144.2/Jaspar(0.726)
More Information | Similar Motifs Found
motif file (matrix)
6 A C T G A G C T A G C T A C T G C G T A A G C T A C G T A C G T 1e-142-3.274e+028.26%6.30%56.7bp (57.7bp)PH0037.1_Hdx/Jaspar(0.755)
More Information | Similar Motifs Found
motif file (matrix)
7 A C G T A C G T A C T G C T A G A G T C A C G T G T C A A C T G G T A C A G T C C T G A T A G C 1e-119-2.746e+020.07%0.00%37.5bp (0.0bp)SMAD5/MA1557.1/Jaspar(0.730)
More Information | Similar Motifs Found
motif file (matrix)
8 A G C T G T C A C T A G C G T A A G T C C G T A C T G A A C G T 1e-111-2.576e+0222.51%19.73%56.5bp (58.1bp)Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer(0.802)
More Information | Similar Motifs Found
motif file (matrix)
9 C T G A A C G T A G T C C G A T C A G T A C T G C G T A A T C G A G C T A C G T A C T G T C G A 1e-103-2.379e+020.23%0.04%50.8bp (58.0bp)NKX2-2/MA1645.1/Jaspar(0.671)
More Information | Similar Motifs Found
motif file (matrix)
10 A C T G G T C A G A C T A C T G C G T A A C T G A C T G C G T A A C G T A G T C A G T C C G T A 1e-101-2.341e+020.11%0.01%44.5bp (59.3bp)GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer(0.603)
More Information | Similar Motifs Found
motif file (matrix)
11 C G T A A C T G C G T A A C G T G T C A G C A T G C A T C G T A A C G T A G T C 1e-80-1.846e+021.54%0.93%54.9bp (56.7bp)GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer(0.951)
More Information | Similar Motifs Found
motif file (matrix)
12 T C G A A C T G A C G T G T A C A G T C A C G T A C G T C T G A C G T A A C G T G T A C A T G C 1e-79-1.821e+020.09%0.01%54.2bp (41.7bp)PH0035.1_Gsc/Jaspar(0.726)
More Information | Similar Motifs Found
motif file (matrix)
13 T C A G G A T C G C A T T A C G C T G A T A G C G A T C A T G C 1e-78-1.810e+0215.15%13.17%56.3bp (59.6bp)MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer(0.821)
More Information | Similar Motifs Found
motif file (matrix)
14 C G A T A C T G A G C T G T A C C G T A C T A G C T A G C A G T A G T C A C G T A C G T T G C A 1e-74-1.720e+020.22%0.05%56.1bp (58.2bp)PH0140.1_Pknox1/Jaspar(0.695)
More Information | Similar Motifs Found
motif file (matrix)
15 A G T C A G T C A C T G A C G T A C T G A C G T C T G A A G T C 1e-69-1.606e+023.04%2.20%57.3bp (60.5bp)PB0044.1_Mtf1_1/Jaspar(0.684)
More Information | Similar Motifs Found
motif file (matrix)
16 A G T C A G C T C G A T C G T A A G T C A G C T A C T G C G T A A C G T A C G T G A C T A C T G 1e-67-1.561e+020.09%0.01%57.6bp (61.1bp)ONECUT1/MA0679.2/Jaspar(0.655)
More Information | Similar Motifs Found
motif file (matrix)
17 A T C G G C A T T A C G G A T C A G C T A G C T A G C T A G T C 1e-63-1.465e+0223.59%21.45%56.1bp (58.3bp)IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer(0.687)
More Information | Similar Motifs Found
motif file (matrix)
18 C G A T T G A C G C T A G A C T G C A T G A T C G C A T T A G C T G A C G C A T C T G A G A T C 1e-62-1.444e+020.14%0.03%44.6bp (57.6bp)PRDM1/MA0508.3/Jaspar(0.619)
More Information | Similar Motifs Found
motif file (matrix)
19 G T A C G A C T T C G A C A G T A G C T A G T C T C A G C G A T A T G C G C A T G T A C G T A C 1e-60-1.383e+020.12%0.02%46.5bp (57.6bp)ZNF140/MA1589.1/Jaspar(0.601)
More Information | Similar Motifs Found
motif file (matrix)
20 G T C A A C G T A C T G C G T A A T G C A C G T A G T C G T C A 1e-58-1.354e+026.44%5.30%55.9bp (56.8bp)FOS/MA0476.1/Jaspar(0.963)
More Information | Similar Motifs Found
motif file (matrix)
21 T C G A A T C G C A G T C T A G G A T C G T A C G T A C G C A T A G C T A G C T 1e-57-1.322e+0213.08%11.49%55.9bp (57.3bp)NR4A1/MA1112.2/Jaspar(0.759)
More Information | Similar Motifs Found
motif file (matrix)
22 A G T C A C G T C G T A A G T C A C G T C G T A A C G T A G T C A C G T C G A T A G T C A C G T 1e-55-1.288e+020.05%0.00%56.9bp (76.1bp)ZKSCAN1/MA1585.1/Jaspar(0.662)
More Information | Similar Motifs Found
motif file (matrix)
23 C G T A A T C G A C G T A C G T A T C G A C T G A C G T A G T C G A C T A C T G A C T G C G A T 1e-55-1.286e+020.06%0.00%54.2bp (57.6bp)Hand1::Tcf3/MA0092.1/Jaspar(0.639)
More Information | Similar Motifs Found
motif file (matrix)
24 A T G C T G A C T A C G T G A C C A G T C T A G C T A G T A G C A G C T C A T G 1e-49-1.149e+025.78%4.78%55.6bp (59.4bp)HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer(0.680)
More Information | Similar Motifs Found
motif file (matrix)
25 A T C G A C T G C G T A A C G T A C T G C T G A A G T C C T G A T C G A A C T G A C G T A C G T 1e-49-1.148e+020.06%0.00%57.4bp (21.1bp)Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer(0.664)
More Information | Similar Motifs Found
motif file (matrix)
26 G T A C A C G T A G T C A G C T A G T C G A C T A G T C A G T C 1e-47-1.083e+0227.45%25.51%55.8bp (55.7bp)PB0076.1_Sp4_1/Jaspar(0.699)
More Information | Similar Motifs Found
motif file (matrix)
27 A C T G C G A T A C T G C G T A A G C T A G T C G T C A A T C G A G C T A C T G A G T C T C G A 1e-42-9.675e+010.04%0.00%54.9bp (39.5bp)GFI1/MA0038.2/Jaspar(0.580)
More Information | Similar Motifs Found
motif file (matrix)
28 C G T A A G T C A C G T A G T C A T C G T A C G C T A G A C G T A C G T A C T G 1e-34-8.053e+010.05%0.00%56.6bp (42.6bp)PB0024.1_Gcm1_1/Jaspar(0.582)
More Information | Similar Motifs Found
motif file (matrix)
29 A T C G A G T C A T G C A T G C G T A C T A C G A T C G A C T G 1e-32-7.529e+0113.53%12.31%55.8bp (54.8bp)TFAP2E/MA1569.1/Jaspar(0.790)
More Information | Similar Motifs Found
motif file (matrix)
30 A C G T A C G T A G T C A C T G C G T A A C G T A C T G C G T A 1e-25-5.832e+010.16%0.07%56.9bp (51.9bp)PB0005.1_Bbx_1/Jaspar(0.680)
More Information | Similar Motifs Found
motif file (matrix)