Information for 13-TTATTTGRAGGT (Motif 13)

A C G T A G C T C G T A A C G T A G C T A G C T C T A G C T G A C G T A C T A G C T A G A G C T
Reverse Opposite:
C T G A A G T C A G T C A C G T A G C T A G T C C T G A T C G A T C G A A C G T C T G A C G T A
p-value:1e-274
log p-value:-6.322e+02
Information Content per bp:1.856
Number of Target Sequences with motif357.0
Percentage of Target Sequences with motif68.52%
Number of Background Sequences with motif11.1
Percentage of Background Sequences with motif0.60%
Average Position of motif in Targets221.3 +/- 74.6bp
Average Position of motif in Background331.2 +/- 83.3bp
Strand Bias (log2 ratio + to - strand density)6.9
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RLM1(MacIsaac)/Yeast

Match Rank:1
Score:0.76
Offset:1
Orientation:forward strand
Alignment:TTATTTGRAGGT
-TATTTATAGA-
 A C G T A G C T C G T A A C G T A G C T A G C T C T A G C T G A C G T A C T A G C T A G A G C T
A C G T A G C T C G T A C G A T C A G T C A G T C G T A C G A T C T G A A T C G C T G A A C G T

Mef2/dmmpmm(Papatsenko)/fly

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TTATTTGRAGGT
TTATTTTTAG--
 A C G T A G C T C G T A A C G T A G C T A G C T C T A G C T G A C G T A C T A G C T A G A G C T
A G C T A C G T C G T A A C G T A C G T C G A T C G A T A C G T C T G A C T A G A C G T A C G T

HuR(RRM)/Homo_sapiens-RNCMPT00032-PBM/HughesRNA

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TTATTTGRAGGT
TTATTTT-----
 A C G T A G C T C G T A A C G T A G C T A G C T C T A G C T G A C G T A C T A G C T A G A G C T
A C G T A C G T C G T A C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Antp/dmmpmm(Bigfoot)/fly

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TTATTTGRAGGT
ATTATT-------
 A C G T A C G T A G C T C G T A A C G T A G C T A G C T C T A G C T G A C G T A C T A G C T A G A G C T
C G T A A C G T A G C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SMP1/MA0383.1/Jaspar

Match Rank:5
Score:0.64
Offset:-7
Orientation:reverse strand
Alignment:-------TTATTTGRAGGT--
NNCTNNTTTAATTATAGGTNA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G T A A C G T A G C T A G C T C T A G C T G A C G T A C T A G C T A G A G C T A C G T A C G T
G C A T A C T G A T G C C G A T T C G A C T G A G A C T G C A T G A C T G T C A C G T A C G A T C A G T C T G A C G A T C T G A C A T G T C A G G C A T G T C A T C G A

eve/dmmpmm(Down)/fly

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TTATTTGRAGGT
ATNATTT------
 A C G T A C G T A G C T C G T A A C G T A G C T A G C T C T A G C T G A C G T A C T A G C T A G A G C T
C G T A G A C T C G T A G C T A C G A T C A G T C A G T A C G T A C G T A C G T A C G T A C G T A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTATTTGRAGGT
CTATTTTTGG--
 A C G T A G C T C G T A A C G T A G C T A G C T C T A G C T G A C G T A C T A G C T A G A G C T
A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G A C G T A C G T

TCX3/MA1682.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTATTTGRAGGT--
AAATTTGAATTTTA
 A C G T A G C T C G T A A C G T A G C T A G C T C T A G C T G A C G T A C T A G C T A G A G C T A C G T A C G T
C G T A C G T A C G T A G C A T G C A T G C A T A C T G G C T A G C T A G C A T G C A T G C A T C G A T C G T A

PABPC1(?)/MEL-PABC1-CLIP-Seq(GSE69755)/Homer

Match Rank:9
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TTATTTGRAGGT
NNCTTTATTD------
 A C G T A C G T A C G T A C G T A C G T A G C T C G T A A C G T A G C T A G C T C T A G C T G A C G T A C T A G C T A G A G C T
T G C A G C T A T A G C G A C T C A G T G C A T G C T A G C A T C G A T C T A G A C G T A C G T A C G T A C G T A C G T A C G T

Tv_0226(RRM)/Trichomonas_vaginalis-RNCMPT00226-PBM/HughesRNA

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTATTTGRAGGT
NTTATTGN-----
 A C G T A C G T A G C T C G T A A C G T A G C T A G C T C T A G C T G A C G T A C T A G C T A G A G C T
G T A C A C G T A C G T C G T A A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T