Information for 9-CCTTTGCCTC (Motif 14)

A G T C A G T C A C G T A G C T A C G T C T A G A G T C A G T C A C G T A G T C
Reverse Opposite:
C T A G C G T A A C T G A C T G G A T C C G T A T C G A C G T A A C T G A C T G
p-value:1e-274
log p-value:-6.321e+02
Information Content per bp:1.895
Number of Target Sequences with motif395.0
Percentage of Target Sequences with motif75.82%
Number of Background Sequences with motif48.6
Percentage of Background Sequences with motif2.64%
Average Position of motif in Targets270.1 +/- 63.7bp
Average Position of motif in Background215.4 +/- 195.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.96
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---CCTTTGCCTC-
TGACCTTTGCCCCA
 A C G T A C G T A C G T A G T C A G T C A C G T A G C T A C G T C T A G A G T C A G T C A C G T A G T C A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---CCTTTGCCTC-
TGACCTTTGCCCTA
 A C G T A C G T A C G T A G T C A G T C A C G T A G C T A C G T C T A G A G T C A G T C A C G T A G T C A C G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:3
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CCTTTGCCTC--
TGACCTTTGCCCTAN
 A C G T A C G T A C G T A G T C A G T C A C G T A G C T A C G T C T A G A G T C A G T C A C G T A G T C A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

PCBP3(KH)/Mus_musculus-RNCMPT00215-PBM/HughesRNA

Match Rank:4
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CCTTTGCCTC
-CTTTCCCT-
 A G T C A G T C A C G T A G C T A C G T C T A G A G T C A G T C A C G T A G T C
A C G T G T A C G A C T C G A T C G A T A G T C A G T C A G T C A C G T A C G T

PCBP1(KH)/Mus_musculus-RNCMPT00239-PBM/HughesRNA

Match Rank:5
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CCTTTGCCTC
CCTTTCCC--
 A G T C A G T C A C G T A G C T A C G T C T A G A G T C A G T C A C G T A G T C
A G T C G T A C G A C T C G A T C G A T A G T C A G T C A G T C A C G T A C G T

PPARa(NR),DR1/Liver-Ppara-ChIP-Seq(GSE47954)/Homer

Match Rank:6
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---CCTTTGCCTC--
TGACCTTTGMCCTNB
 A C G T A C G T A C G T A G T C A G T C A C G T A G C T A C G T C T A G A G T C A G T C A C G T A G T C A C G T A C G T
G C A T T C A G T G C A G T A C G A T C A G C T A G C T A C G T T A C G T G C A G A T C G A T C G A C T G C T A A C T G

MOT3/Literature(Harbison)/Yeast

Match Rank:7
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:CCTTTGCCTC
----TACCTN
 A G T C A G T C A C G T A G C T A C G T C T A G A G T C A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T C T A G A G T C A G T C A C G T C A G T

MOT3(MacIsaac)/Yeast

Match Rank:8
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:CCTTTGCCTC
----TACCTN
 A G T C A G T C A C G T A G C T A C G T C T A G A G T C A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T C T A G A G T C A G T C A C G T C A G T

MOT3/MA0340.1/Jaspar

Match Rank:9
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:CCTTTGCCTC
----TACCTN
 A G T C A G T C A C G T A G C T A C G T C T A G A G T C A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T C T A G A G T C A G T C A C G T C A G T

Sox3/MA0514.1/Jaspar

Match Rank:10
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCTTTGCCTC
CCTTTGTTTT
 A G T C A G T C A C G T A G C T A C G T C T A G A G T C A G T C A C G T A G T C
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T