Information for 11-AAAMTGGACA (Motif 18)

C T G A T C G A T C G A T G A C G A C T C T A G C A T G T G C A T A G C G C T A
Reverse Opposite:
C G A T A T C G A C G T G T A C G A T C C T G A A C T G A G C T A G C T G A C T
p-value:1e-258
log p-value:-5.962e+02
Information Content per bp:1.501
Number of Target Sequences with motif357.0
Percentage of Target Sequences with motif68.52%
Number of Background Sequences with motif23.4
Percentage of Background Sequences with motif1.27%
Average Position of motif in Targets411.2 +/- 117.7bp
Average Position of motif in Background255.9 +/- 432.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.35
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ROX8(RRM)/Drosophila_melanogaster-RNCMPT00148-PBM/HughesRNA

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:AAAMTGGACA
AAAATGG---
 C T G A T C G A T C G A T G A C G A C T C T A G C A T G T G C A T A G C G C T A
C G T A C G T A C G T A C T G A C G A T C T A G A C T G A C G T A C G T A C G T

prd/dmmpmm(Down)/fly

Match Rank:2
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AAAMTGGACA
AAACTG----
 C T G A T C G A T C G A T G A C G A C T C T A G C A T G T G C A T A G C G C T A
T C G A G T C A G C T A A G T C A G C T T C A G A C G T A C G T A C G T A C G T

Lm_0212(RRM)/Leishmania_major-RNCMPT00212-PBM/HughesRNA

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AAAMTGGACA
AAAATGN---
 C T G A T C G A T C G A T G A C G A C T C T A G C A T G T G C A T A G C G C T A
C G T A C G T A C G T A C G T A A C G T A C T G G C A T A C G T A C G T A C G T

FMR1(KH)/Drosophila_melanogaster-RNCMPT00015-PBM/HughesRNA

Match Rank:4
Score:0.64
Offset:3
Orientation:forward strand
Alignment:AAAMTGGACA
---ANGGACA
 C T G A T C G A T C G A T G A C G A C T C T A G C A T G T G C A T A G C G C T A
A C G T A C G T A C G T C G T A G A T C A C T G A C T G C G T A G A T C C T G A

PB0141.1_Isgf3g_2/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AAAMTGGACA-
GCAAAACATTACTA
 A C G T A C G T A C G T C T G A T C G A T C G A T G A C G A C T C T A G C A T G T G C A T A G C G C T A A C G T
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A

dof42(C2C2dof)/col-dof42-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AAAMTGGACA
AAAAAGGC--
 C T G A T C G A T C G A T G A C G A C T C T A G C A T G T G C A T A G C G C T A
C G T A C G T A C G T A C G T A C G T A A C T G A C T G A G T C A C G T A C G T

SOC1/MA0554.1/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---AAAMTGGACA--
CCAAAAATGGAAANA
 A C G T A C G T A C G T C T G A T C G A T C G A T G A C G A C T C T A G C A T G T G C A T A G C G C T A A C G T A C G T
T G A C G A T C G C T A C G T A C G T A C G T A C G T A G C A T T C A G A C T G G C T A G C T A G C T A C T G A C G T A

CPEB2(RRM)/Homo_sapiens-RNCMPT00012-PBM/HughesRNA

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AAAMTGGACA
AAAAAAG----
 A C G T C T G A T C G A T C G A T G A C G A C T C T A G C A T G T G C A T A G C G C T A
G T C A C G T A C G T A C G T A C G T A C G T A C T A G A C G T A C G T A C G T A C G T

AP3/MA0556.1/Jaspar

Match Rank:9
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----AAAMTGGACA
TTCCAAAAATGGAAA
 A C G T A C G T A C G T A C G T A C G T C T G A T C G A T C G A T G A C G A C T C T A G C A T G T G C A T A G C G C T A
G C A T C G A T G T A C A G T C G T C A G C T A C G T A G C T A C T G A C G A T T C A G C T A G G T C A G C T A C G T A

Unknown3/Arabidopsis-Promoters/Homer

Match Rank:10
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AAAMTGGACA
AYTAAACCGG---
 A C G T A C G T A C G T C T G A T C G A T C G A T G A C G A C T C T A G C A T G T G C A T A G C G C T A
C G T A G A C T G A C T C T G A C T G A C G T A G T A C A T G C T A C G C T A G A C G T A C G T A C G T