Information for 16-GGTGTACTCTCG (Motif 19)

C T A G A C T G A C G T C T A G C G A T C T G A A G T C A C G T A G T C A C G T A G T C T C A G
Reverse Opposite:
A G T C C T A G C G T A C T A G C G T A A C T G A G C T C G T A A G T C T C G A A G T C G A T C
p-value:1e-258
log p-value:-5.950e+02
Information Content per bp:1.898
Number of Target Sequences with motif347.0
Percentage of Target Sequences with motif66.60%
Number of Background Sequences with motif15.7
Percentage of Background Sequences with motif0.85%
Average Position of motif in Targets405.3 +/- 102.4bp
Average Position of motif in Background298.4 +/- 224.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MAL13P1.35(RRM)/Plasmodium_falciparum-RNCMPT00234-PBM/HughesRNA

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GGTGTACTCTCG
-GTGTAAT----
 C T A G A C T G A C G T C T A G C G A T C T G A A G T C A C G T A G T C A C G T A G T C T C A G
A C G T A C T G A C G T A C T G A G C T C G T A G C T A A G C T A C G T A C G T A C G T A C G T

SPL11(SBP)/col100-SPL11-DAP-Seq(GSE60143)/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GGTGTACTCTCG
-YTGTACTTBH-
 C T A G A C T G A C G T C T A G C G A T C T G A A G T C A C G T A G T C A C G T A G T C T C A G
A C G T G A C T G A C T A T C G C G A T G T C A G T A C A G C T C G A T A C G T G T A C A C G T

CG11360(KH)/Drosophila_melanogaster-RNCMPT00129-PBM/HughesRNA

Match Rank:3
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GGTGTACTCTCG
--TATACTCT--
 C T A G A C T G A C G T C T A G C G A T C T G A A G T C A C G T A G T C A C G T A G T C T C A G
A C G T A C G T A G C T C G T A G C A T G C T A A G T C G C A T A G T C C G A T A C G T A C G T

HMG-1/MA0044.1/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGTGTACTCTCG
GTTGTACTC---
 C T A G A C T G A C G T C T A G C G A T C T G A A G T C A C G T A G T C A C G T A G T C T C A G
A T C G A C G T A G C T A T C G A G C T C G T A G A C T A C G T A G T C A C G T A C G T A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:5
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GGTGTACTCTCG-----
--NNAATTCTCGNTNAN
 C T A G A C T G A C G T C T A G C G A T C T G A A G T C A C G T A G T C A C G T A G T C T C A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

PB0140.1_Irf6_2/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GGTGTACTCTCG-----
--ACCACTCTCGGTCAC
 C T A G A C T G A C G T C T A G C G A T C T G A A G T C A C G T A G T C A C G T A G T C T C A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

PB0138.1_Irf4_2/Jaspar

Match Rank:7
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GGTGTACTCTCG-----
--AGTATTCTCGGTTGC
 C T A G A C T G A C G T C T A G C G A T C T G A A G T C A C G T A G T C A C G T A G T C T C A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

SPL9(SBP)/colamp-SPL9-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGTGTACTCTCG
-BTGTACTT---
 C T A G A C T G A C G T C T A G C G A T C T G A A G T C A C G T A G T C A C G T A G T C T C A G
A C G T A G C T G A C T A C T G A C G T G T C A A G T C A C G T C G A T A C G T A C G T A C G T

AT3G51470(DBP)/col-AT3G51470-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGTGTACTCTCG
GGTGCACCDWAA
 C T A G A C T G A C G T C T A G C G A T C T G A A G T C A C G T A G T C A C G T A G T C T C A G
C A T G T C A G G C A T T C A G A G T C C G T A A G T C T A G C C G A T G C A T G T C A C G T A

NR1I3/MA1534.1/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GGTGTACTCTCG
-ATGAACTTT--
 C T A G A C T G A C G T C T A G C G A T C T G A A G T C A C G T A G T C A C G T A G T C T C A G
A C G T C T G A G A C T T C A G G T C A G T C A A G T C A G C T G A C T G C A T A C G T A C G T