Information for 17-TTATGAATAAAT (Motif 20)

A G C T A C G T C G T A C A G T A C T G G T C A G T C A A G C T C G T A C G T A C G T A A C G T
Reverse Opposite:
C G T A C G A T A C G T G C A T C T G A C A G T C A G T G T A C G T C A C G A T C G T A T C G A
p-value:1e-256
log p-value:-5.904e+02
Information Content per bp:1.781
Number of Target Sequences with motif366.0
Percentage of Target Sequences with motif70.25%
Number of Background Sequences with motif34.3
Percentage of Background Sequences with motif1.86%
Average Position of motif in Targets93.8 +/- 50.6bp
Average Position of motif in Background246.9 +/- 127.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)2.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

abd-A/dmmpmm(Bigfoot)/fly

Match Rank:1
Score:0.75
Offset:6
Orientation:forward strand
Alignment:TTATGAATAAAT
------ATAATT
 A G C T A C G T C G T A C A G T A C T G G T C A G T C A A G C T C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G C T C T G A C G T A C G A T A C G T

abd-A/dmmpmm(Down)/fly

Match Rank:2
Score:0.74
Offset:6
Orientation:reverse strand
Alignment:TTATGAATAAAT
------ATAAAT
 A G C T A C G T C G T A C A G T A C T G G T C A G T C A A G C T C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T G T C A G C T A G C T A G C A T

PB0129.1_Glis2_2/Jaspar

Match Rank:3
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TTATGAATAAAT-
AATATTAATAAAGA
 A C G T A G C T A C G T C G T A C A G T A C T G G T C A G T C A A G C T C G T A C G T A C G T A A C G T A C G T
G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A

PH0148.1_Pou3f3/Jaspar

Match Rank:4
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----TTATGAATAAAT-
TNNATTATGCATANNTT
 A C G T A C G T A C G T A C G T A G C T A C G T C G T A C A G T A C T G G T C A G T C A A G C T C G T A C G T A C G T A A C G T A C G T
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

Antp/dmmpmm(SeSiMCMC)/fly

Match Rank:5
Score:0.68
Offset:6
Orientation:forward strand
Alignment:TTATGAATAAAT
------ATAATT
 A G C T A C G T C G T A C A G T A C T G G T C A G T C A A G C T C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A G C A T C G A T

Antp/dmmpmm(Bigfoot)/fly

Match Rank:6
Score:0.68
Offset:5
Orientation:forward strand
Alignment:TTATGAATAAAT
-----AATAAT-
 A G C T A C G T C G T A C A G T A C T G G T C A G T C A A G C T C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T G C A C G T A A C G T C T G A C G T A C G A T A C G T

Dfd/dmmpmm(Down)/fly

Match Rank:7
Score:0.67
Offset:7
Orientation:reverse strand
Alignment:TTATGAATAAAT
-------TAATT
 A G C T A C G T C G T A C A G T A C T G G T C A G T C A A G C T C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C G A G C T A C G A T A C G T

zen/dmmpmm(Bigfoot)/fly

Match Rank:8
Score:0.67
Offset:5
Orientation:forward strand
Alignment:TTATGAATAAAT
-----AATAAA-
 A G C T A C G T C G T A C A G T A C T G G T C A G T C A A G C T C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G T C A C G T A A C G T C G T A C G T A C G T A A C G T

Tb_0218(RRM)/Trypanosoma_brucei-RNCMPT00218-PBM/HughesRNA

Match Rank:9
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:TTATGAATAAAT
----TAATAACT
 A G C T A C G T C G T A C A G T A C T G G T C A G T C A A G C T C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A G C T C G T A C G T A A C G T C G T A C G T A G T A C A C G T

bin/dmmpmm(Bergman)/fly

Match Rank:10
Score:0.67
Offset:6
Orientation:forward strand
Alignment:TTATGAATAAAT-
------ATAAATA
 A G C T A C G T C G T A C A G T A C T G G T C A G T C A A G C T C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T C G T A C G T A C G T A A C G T C G T A