Information for 12-ATTTWGCTTM (Motif 21)

G C T A C G A T G A C T G C A T C G A T T C A G G A T C G A C T C G A T G T A C
Reverse Opposite:
C A T G G C T A C T G A C T A G A G T C G C T A C G T A C T G A G C T A C G A T
p-value:1e-254
log p-value:-5.856e+02
Information Content per bp:1.645
Number of Target Sequences with motif348.0
Percentage of Target Sequences with motif66.79%
Number of Background Sequences with motif20.0
Percentage of Background Sequences with motif1.08%
Average Position of motif in Targets120.6 +/- 48.2bp
Average Position of motif in Background232.6 +/- 256.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.53
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ng_0261(RRM)/Naegleria_gruberi-RNCMPT00261-PBM/HughesRNA

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-ATTTWGCTTM
AATTTTG----
 A C G T G C T A C G A T G A C T G C A T C G A T T C A G G A T C G A C T C G A T G T A C
C T G A C T G A A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T

HNRNPR(RRM)/Gallus_gallus-RNCMPT00288-PBM/HughesRNA

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-ATTTWGCTTM
AATTTGG----
 A C G T G C T A C G A T G A C T G C A T C G A T T C A G G A T C G A C T C G A T G T A C
C T G A G C T A A C G T A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T

cad/dmmpmm(Bigfoot)/fly

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:ATTTWGCTTM
TTTATGNTT-
 G C T A C G A T G A C T G C A T C G A T T C A G G A T C G A C T C G A T G T A C
C G A T A C G T A C G T C G T A A G C T C T A G T G C A A G C T C G A T A C G T

ROX8(RRM)/Drosophila_melanogaster-RNCMPT00148-PBM/HughesRNA

Match Rank:4
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--ATTTWGCTTM
CCATTTT-----
 A C G T A C G T G C T A C G A T G A C T G C A T C G A T T C A G G A T C G A C T C G A T G T A C
G T A C G A T C C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Lm_0212(RRM)/Leishmania_major-RNCMPT00212-PBM/HughesRNA

Match Rank:5
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--ATTTWGCTTM
NCATTTT-----
 A C G T A C G T G C T A C G A T G A C T G C A T C G A T T C A G G A T C G A C T C G A T G T A C
C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

AT5G60130(ABI3VP1)/col-AT5G60130-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:ATTTWGCTTM----
--TTTBCTTARAAW
 G C T A C G A T G A C T G C A T C G A T T C A G G A T C G A C T C G A T G T A C A C G T A C G T A C G T A C G T
A C G T A C G T C G A T A C G T A C G T A T C G A G T C C G A T G C A T T G C A C T G A C G T A C G T A C G T A

br-Z3/dmmpmm(SeSiMCMC)/fly

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:ATTTWGCTTM
-TTTAGTTTA
 G C T A C G A T G A C T G C A T C G A T T C A G G A T C G A C T C G A T G T A C
A C G T G C A T G A C T A C G T C G A T C T A G C G A T G C A T A C G T G C T A

HuR(RRM)/Homo_sapiens-RNCMPT00117-PBM/HughesRNA

Match Rank:8
Score:0.64
Offset:2
Orientation:forward strand
Alignment:ATTTWGCTTM
--TTTGTTT-
 G C T A C G A T G A C T G C A T C G A T T C A G G A T C G A C T C G A T G T A C
A C G T A C G T A C G T A C G T C G A T T C A G A C G T A G C T A C G T A C G T

HuR(RRM)/Homo_sapiens-RNCMPT00112-PBM/HughesRNA

Match Rank:9
Score:0.64
Offset:2
Orientation:forward strand
Alignment:ATTTWGCTTM
--TTTGTTT-
 G C T A C G A T G A C T G C A T C G A T T C A G G A T C G A C T C G A T G T A C
A C G T A C G T A C G T A C G T C G A T C T A G A C G T A C G T A C G T A C G T

ELAV(RRM)/Drosophila_melanogaster-RNCMPT00121-PBM/HughesRNA

Match Rank:10
Score:0.64
Offset:2
Orientation:forward strand
Alignment:ATTTWGCTTM
--TTTGTTT-
 G C T A C G A T G A C T G C A T C G A T T C A G G A T C G A C T C G A T G T A C
A C G T A C G T A C G T A C G T C A G T C A T G A C G T A C G T A C G T A C G T