Information for 20-AGGGTGGACGCG (Motif 23)

C G T A C T A G A C T G A C T G A C G T C T A G A C T G C G T A A G T C C T A G A G T C C T A G
Reverse Opposite:
G A T C C T A G A G T C C T A G A C G T A G T C A G T C C G T A A G T C A G T C A G T C A C G T
p-value:1e-238
log p-value:-5.488e+02
Information Content per bp:1.908
Number of Target Sequences with motif326.0
Percentage of Target Sequences with motif62.57%
Number of Background Sequences with motif14.0
Percentage of Background Sequences with motif0.76%
Average Position of motif in Targets378.7 +/- 84.2bp
Average Position of motif in Background300.8 +/- 170.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CG7804(RRM)/Drosophila_melanogaster-RNCMPT00146-PBM/HughesRNA

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:AGGGTGGACGCG
AGTGTGG-----
 C G T A C T A G A C T G A C T G A C G T C T A G A C T G C G T A A G T C C T A G A G T C C T A G
C G T A A C T G A C G T C T A G C G A T A C T G C T A G A C G T A C G T A C G T A C G T A C G T

SRSF9(RRM)/Homo_sapiens-RNCMPT00067-PBM/HughesRNA

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AGGGTGGACGCG
-GGAAGGA----
 C G T A C T A G A C T G A C T G A C G T C T A G A C T G C G T A A G T C C T A G A G T C C T A G
A C G T A C T G A C T G C T G A G C T A A C T G T A C G G T C A A C G T A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:3
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:AGGGTGGACGCG
---GTGGAT---
 C G T A C T A G A C T G A C T G A C G T C T A G A C T G C G T A A G T C C T A G A G T C C T A G
A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T

TCP16/MA0587.1/Jaspar

Match Rank:4
Score:0.66
Offset:3
Orientation:forward strand
Alignment:AGGGTGGACGCG-
---GTGGACCCGG
 C G T A C T A G A C T G A C T G A C G T C T A G A C T G C G T A A G T C C T A G A G T C C T A G A C G T
A C G T A C G T A C G T C T A G G A C T A C T G A C T G C T G A A T G C A G T C A G T C T C A G T A C G

ZNF263/MA0528.2/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AGGGTGGACGCG
GGGGGGAGGAGG--
 A C G T A C G T C G T A C T A G A C T G A C T G A C G T C T A G A C T G C G T A A G T C C T A G A G T C C T A G
T C A G A T C G C T A G T A C G A T C G A C T G G T C A A C T G A T C G T G C A T A C G A T C G A C G T A C G T

ZBTB7C/MA0695.1/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AGGGTGGACGCG
NTCGGTGGTCGC-
 A C G T C G T A C T A G A C T G A C T G A C G T C T A G A C T G C G T A A G T C C T A G A G T C C T A G
A C G T C A G T A G T C C A T G C A T G C A G T T C A G A C T G C A G T G A T C A T C G G A T C A C G T

SWI6(MacIsaac)/Yeast

Match Rank:7
Score:0.64
Offset:6
Orientation:forward strand
Alignment:AGGGTGGACGCG
------GACGCG
 C G T A C T A G A C T G A C T G A C G T C T A G A C T G C G T A A G T C C T A G A G T C C T A G
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C G A G A T C C T A G A G T C C T A G

PF10_0068(RRM)/Plasmodium_falciparum-RNCMPT00199-PBM/HughesRNA

Match Rank:8
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AGGGTGGACGCG
-NGGAGGAA---
 C G T A C T A G A C T G A C T G A C G T C T A G A C T G C G T A A G T C C T A G A G T C C T A G
A C G T C G A T A C T G A C T G C G T A A C T G A C T G C G T A C T G A A C G T A C G T A C G T

RCS1(MacIsaac)/Yeast

Match Rank:9
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AGGGTGGACGCG
-GGGTGCA----
 C G T A C T A G A C T G A C T G A C G T C T A G A C T G C G T A A G T C C T A G A G T C C T A G
A C G T T C A G C T A G A T C G A G C T C T A G A G T C T C G A A C G T A C G T A C G T A C G T

NCU02404(RRM)/Neurospora_crassa-RNCMPT00238-PBM/HughesRNA

Match Rank:10
Score:0.64
Offset:2
Orientation:forward strand
Alignment:AGGGTGGACGCG
--GGAGGAA---
 C G T A C T A G A C T G A C T G A C G T C T A G A C T G C G T A A G T C C T A G A G T C C T A G
A C G T A C G T A C T G A C T G C G T A A C T G A C T G C G T A C T G A A C G T A C G T A C G T