Information for 18-CTCTCGTGGC (Motif 27)

A G T C A C G T A G T C A C G T A G T C T C A G G A C T A C T G T C A G A G T C
Reverse Opposite:
C T A G A G T C A G T C C G T A A G T C T C A G C G T A T A C G C G T A T C A G
p-value:1e-211
log p-value:-4.860e+02
Information Content per bp:1.900
Number of Target Sequences with motif319.0
Percentage of Target Sequences with motif61.23%
Number of Background Sequences with motif32.5
Percentage of Background Sequences with motif1.76%
Average Position of motif in Targets405.1 +/- 112.5bp
Average Position of motif in Background265.6 +/- 139.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PIF3/MA0560.1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CTCTCGTGGC-
-TCACGTGGCN
 A G T C A C G T A G T C A C G T A G T C T C A G G A C T A C T G T C A G A G T C A C G T
A C G T G A C T A G T C C G T A A G T C C T A G A C G T A C T G A T C G T A G C G A C T

PIF5/MA0562.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CTCTCGTGGC
-TCACGTGG-
 A G T C A C G T A G T C A C G T A G T C T C A G G A C T A C T G T C A G A G T C
A C G T A G C T A G T C C G T A A G T C C T A G A C G T A C T G A T C G A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CTCTCGTGGC
GTCACGTGGM
 A G T C A C G T A G T C A C G T A G T C T C A G G A C T A C T G T C A G A G T C
T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C

PB0147.1_Max_2/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CTCTCGTGGC--
NNGTCGCGTGNCAC
 A C G T A C G T A G T C A C G T A G T C A C G T A G T C T C A G G A C T A C T G T C A G A G T C A C G T A C G T
G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C

ABF1(bZIP)/Arabidopsis-ABF1-ChIP-Seq(GSE80564)/Homer

Match Rank:5
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CTCTCGTGGC
--CACGTGGC
 A G T C A C G T A G T C A C G T A G T C T C A G G A C T A C T G T C A G A G T C
A C G T A C G T A T G C C T G A A G T C T C A G A C G T C T A G C A T G T G A C

ABI5(bZIP)/col-ABI5-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CTCTCGTGGC
--CACGTGGC
 A G T C A C G T A G T C A C G T A G T C T C A G G A C T A C T G T C A G A G T C
A C G T A C G T A T G C C G T A A G T C A C T G A C G T A C T G A C T G T G A C

E-box/Arabidopsis-Promoters/Homer

Match Rank:7
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CTCTCGTGGC
--CACGTGGC
 A G T C A C G T A G T C A C G T A G T C T C A G G A C T A C T G T C A G A G T C
A C G T A C G T A T G C C T G A A G T C A T C G A G C T A C T G C A T G T G A C

PIF4/MA0561.1/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CTCTCGTGGC
--CACGTGGC
 A G T C A C G T A G T C A C G T A G T C T C A G G A C T A C T G T C A G A G T C
A C G T A C G T A G T C C G T A A G T C C T A G A C G T A C T G A T C G T A G C

pho/dmmpmm(Pollard)/fly

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CTCTCGTGGC---
GCCGTTATGGCTTC
 A C G T A G T C A C G T A G T C A C G T A G T C T C A G G A C T A C T G T C A G A G T C A C G T A C G T A C G T
C T A G A T G C A G T C C A T G A C G T G A C T C T G A A C G T A C T G A C T G A G T C A C G T A C G T G T A C

bZIP68/MA0968.2/Jaspar

Match Rank:10
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CTCTCGTGGC-
NNTGNTGACGTGGCA
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A G T C T C A G G A C T A C T G T C A G A G T C A C G T
C T A G C G T A C G A T C A T G T A G C G A C T A T C G G T C A A T G C T C A G A C G T C T A G A C T G G T A C C T G A