Information for 20-TTGGACCA (Motif 33)

A G C T A C G T A C T G A C T G C G T A A T G C A G T C G T C A
Reverse Opposite:
A C G T A C T G A T C G C G A T A G T C A G T C C G T A C T G A
p-value:1e-164
log p-value:-3.785e+02
Information Content per bp:1.863
Number of Target Sequences with motif250.0
Percentage of Target Sequences with motif47.98%
Number of Background Sequences with motif17.5
Percentage of Background Sequences with motif0.95%
Average Position of motif in Targets197.5 +/- 30.9bp
Average Position of motif in Background278.3 +/- 209.8bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TCP3(TCP)/colamp-TCP3-DAP-Seq(GSE60143)/Homer

Match Rank:1
Score:0.76
Offset:-5
Orientation:reverse strand
Alignment:-----TTGGACCA--
WWWDTTGGGACCACW
 A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A C T G C G T A A T G C A G T C G T C A A C G T A C G T
C G A T C G T A C G A T C G A T G C A T C A G T C A T G C A T G A C T G G T C A A G T C G A T C C G T A A G T C G C T A

HAP2/MA0313.1/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:TTGGACCA
TTGGT---
 A G C T A C G T A C T G A C T G C G T A A T G C A G T C G T C A
A C G T A C G T C T A G A C T G G A C T A C G T A C G T A C G T

TCP4/MA1035.1/Jaspar

Match Rank:3
Score:0.72
Offset:1
Orientation:forward strand
Alignment:TTGGACCA-
-GGGACCAC
 A G C T A C G T A C T G A C T G C G T A A T G C A G T C G T C A A C G T
A C G T C A T G A C T G A C T G G T C A A G T C A G T C C G T A A G T C

TCP5/MA1067.1/Jaspar

Match Rank:4
Score:0.71
Offset:1
Orientation:forward strand
Alignment:TTGGACCA-
-GGGACCAC
 A G C T A C G T A C T G A C T G C G T A A T G C A G T C G T C A A C G T
A C G T A C T G A C T G A C T G C G T A A G T C A G T C C G T A A G T C

TCP24/MA1286.1/Jaspar

Match Rank:5
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TTGGACCA--
GTTGGGACCACA
 A C G T A C G T A G C T A C G T A C T G A C T G C G T A A T G C A G T C G T C A A C G T A C G T
C T A G G C A T A C G T C A T G A C T G A C T G T C G A A G T C A G T C C T G A G T A C G T C A

TCP3/MA1289.1/Jaspar

Match Rank:6
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TTGGACCA---
GTTGGGACCACAT
 A C G T A C G T A G C T A C G T A C T G A C T G C G T A A T G C A G T C G T C A A C G T A C G T A C G T
C T A G G C A T A C G T A C T G A C T G A C T G G T C A A G T C A G T C C T G A A G T C G C T A C G A T

PTF1(TCP)/colamp-PTF1-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TTGGACCA--
RDDGGGACCACA
 A C G T A C G T A G C T A C G T A C T G A C T G C G T A A T G C A G T C G T C A A C G T A C G T
C T G A C G A T C A G T C A T G A C T G A T C G G T C A A G T C A G T C G T C A A G T C G C T A

ARALYDRAFT_897773/MA1054.1/Jaspar

Match Rank:8
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TTGGACCA-
TGGGGACCAC
 A C G T A G C T A C G T A C T G A C T G C G T A A T G C A G T C G T C A A C G T
A G C T A C T G C A T G C A T G T A C G G T C A A T G C A T G C C T G A G A T C

TCP16(TCP)/colamp-TCP16-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------TTGGACCA-
NNNNNNNRGGHCCAC
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A C T G C G T A A T G C A G T C G T C A A C G T
G A C T A T C G T C G A T C G A C T G A A T G C G C A T C T G A A C T G A C T G G T C A A G T C A G T C C G T A A G T C

ARALYDRAFT_496250/MA1096.1/Jaspar

Match Rank:10
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TTGGACCA-
-GGGACCAC
 A G C T A C G T A C T G A C T G C G T A A T G C A G T C G T C A A C G T
A C G T A C T G A C T G A C T G C G T A A G T C A G T C C G T A A G T C