Information for 5-WAATGCTTGYTC (Motif 5)

C G A T G T C A G T C A A C G T A C T G A G T C C G A T A G C T A C T G A G T C A G C T G A T C
Reverse Opposite:
C T A G C T G A C T A G G T A C C T G A C G T A C T A G G T A C C G T A A C G T A C G T C G T A
p-value:1e-320
log p-value:-7.377e+02
Information Content per bp:1.747
Number of Target Sequences with motif406.0
Percentage of Target Sequences with motif77.93%
Number of Background Sequences with motif18.8
Percentage of Background Sequences with motif1.02%
Average Position of motif in Targets388.6 +/- 179.2bp
Average Position of motif in Background294.0 +/- 198.1bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.90
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AT5G25475(ABI3VP1)/col-AT5G25475-DAP-Seq(GSE60143)/Homer

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-WAATGCTTGYTC--
VHNHTGCTTGNYNNY
 A C G T C G A T G T C A G T C A A C G T A C T G A G T C C G A T A G C T A C T G A G T C A G C T G A T C A C G T A C G T
T C A G G C T A A G T C G C A T A C G T A C T G A G T C A C G T A C G T A C T G C A T G A G C T G T A C A C G T A G C T

ATHB-5/MA0110.3/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-WAATGCTTGYTC
NNAATGATTGNN-
 A C G T C G A T G T C A G T C A A C G T A C T G A G T C C G A T A G C T A C T G A G T C A G C T G A T C
G C A T G C A T G C T A C G T A G C A T C T A G C G T A C G A T C G A T C T A G C G T A C G A T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:WAATGCTTGYTC
GAATGTTTGTTT
 C G A T G T C A G T C A A C G T A C T G A G T C C G A T A G C T A C T G A G T C A G C T G A T C
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T

ATHB7(Homeobox)/col-ATHB7-DAP-Seq(GSE60143)/Homer

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:WAATGCTTGYTC
-AATGATTG---
 C G A T G T C A G T C A A C G T A C T G A G T C C G A T A G C T A C T G A G T C A G C T G A T C
A C G T G T C A C G T A A C G T A T C G C G T A A C G T A C G T C T A G A C G T A C G T A C G T

YAP5(MacIsaac)/Yeast

Match Rank:5
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:WAATGCTTGYTC
--ATGCTT----
 C G A T G T C A G T C A A C G T A C T G A G T C C G A T A G C T A C T G A G T C A G C T G A T C
A C G T A C G T C G T A A C G T C T A G A G T C A G C T G C A T A C G T A C G T A C G T A C G T

ATHB5(HB)/colamp-ATHB5-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:WAATGCTTGYTC
-AATGATTG---
 C G A T G T C A G T C A A C G T A C T G A G T C C G A T A G C T A C T G A G T C A G C T G A T C
A C G T G C T A C G T A A C G T C A T G C G T A A C G T A C G T C T A G A C G T A C G T A C G T

ATHB6(Homeobox)/col-ATHB6-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.65
Offset:1
Orientation:forward strand
Alignment:WAATGCTTGYTC
-AATGATTG---
 C G A T G T C A G T C A A C G T A C T G A G T C C G A T A G C T A C T G A G T C A G C T G A T C
A C G T G C T A C G T A A C G T A T C G C G T A A C G T A C G T C T A G A C G T A C G T A C G T

YAP5/MA0417.1/Jaspar

Match Rank:8
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:WAATGCTTGYTC
--ATGCTT----
 C G A T G T C A G T C A A C G T A C T G A G T C C G A T A G C T A C T G A G T C A G C T G A T C
A C G T A C G T C G T A A C G T C T A G A G T C A G C T C G A T A C G T A C G T A C G T A C G T

ATHB20(Homeobox)/colamp-ATHB20-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:WAATGCTTGYTC
-AATDATTG---
 C G A T G T C A G T C A A C G T A C T G A G T C C G A T A G C T A C T G A G T C A G C T G A T C
A C G T C G T A C G T A A C G T C G T A C G T A A C G T A C G T C T A G A C G T A C G T A C G T

HAHB4(HD-ZIP)/Helianthus anuus/AthaMap

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:WAATGCTTGYTC
TAATGATTG---
 C G A T G T C A G T C A A C G T A C T G A G T C C G A T A G C T A C T G A G T C A G C T G A T C
C G A T C G T A C G T A A C G T C T A G C G T A A C G T C A G T T C A G A C G T A C G T A C G T