Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 521)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 1837)	% of Background Sequences with Motif
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e-234	-5.405e+02	0.0000	325.0	62.38%	16.9	0.92%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e-234	-5.405e+02	0.0000	325.0	62.38%	16.9	0.92%
Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer	YCTTTGTTCC	1e-214	-4.941e+02	0.0000	421.0	80.81%	184.6	10.01%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e-210	-4.836e+02	0.0000	340.0	65.26%	56.7	3.08%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e-209	-4.814e+02	0.0000	426.0	81.77%	208.0	11.28%
TF3A(C2H2)/col-TF3A-DAP-Seq(GSE60143)/Homer	NNDDGAGGAGGWNNN	1e-191	-4.408e+02	0.0000	385.0	73.90%	156.4	8.48%
Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer	CCATTGTTYB	1e-175	-4.033e+02	0.0000	406.0	77.93%	238.7	12.95%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e-169	-3.906e+02	0.0000	357.0	68.52%	147.9	8.02%
NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e-169	-3.901e+02	0.0000	246.0	47.22%	10.5	0.57%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e-169	-3.893e+02	0.0000	383.0	73.51%	200.1	10.85%
p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer	NRRRCAWGTCCDGRCATGYY	1e-168	-3.872e+02	0.0000	238.0	45.68%	6.5	0.35%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e-162	-3.735e+02	0.0000	408.0	78.31%	277.8	15.06%
Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer	RAACAATGGN	1e-159	-3.680e+02	0.0000	423.0	81.19%	326.0	17.67%
ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer	ANCAGGAAGT	1e-149	-3.440e+02	0.0000	343.0	65.83%	164.4	8.91%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e-146	-3.372e+02	0.0000	290.0	55.66%	83.4	4.52%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e-145	-3.353e+02	0.0000	331.0	63.53%	150.7	8.17%
ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer	GAGCCTGGTACTGWGCCTGR	1e-145	-3.347e+02	0.0000	222.0	42.61%	13.3	0.72%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e-144	-3.329e+02	0.0000	391.0	75.05%	283.2	15.35%
ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer	WDNCTGGGCA	1e-143	-3.294e+02	0.0000	295.0	56.62%	96.0	5.21%
PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer	AAGAACATWHTGTTC	1e-141	-3.257e+02	0.0000	267.0	51.25%	61.3	3.32%
Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer	NNAYTTCCTGHN	1e-141	-3.256e+02	0.0000	327.0	62.76%	152.2	8.25%
ANAC011(NAC)/col-ANAC011-DAP-Seq(GSE60143)/Homer	TDCTTGYRNNDCAAG	1e-141	-3.250e+02	0.0000	296.0	56.81%	101.3	5.49%
AT5G25475(ABI3VP1)/col-AT5G25475-DAP-Seq(GSE60143)/Homer	RNNRNCAAGCADNDB	1e-140	-3.238e+02	0.0000	396.0	76.01%	308.3	16.72%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e-140	-3.229e+02	0.0000	307.0	58.93%	120.7	6.54%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e-139	-3.223e+02	0.0000	341.0	65.45%	183.0	9.92%
AT1G76880(Trihelix)/col-AT1G76880-DAP-Seq(GSE60143)/Homer	ACGGTAAAAW	1e-136	-3.150e+02	0.0000	362.0	69.48%	235.2	12.76%
Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer	CCWTTGTYYB	1e-136	-3.144e+02	0.0000	425.0	81.57%	407.4	22.09%
ANAC004(NAC)/colamp-ANAC004-DAP-Seq(GSE60143)/Homer	WNCTTVYNNNRBAAG	1e-136	-3.142e+02	0.0000	298.0	57.20%	113.0	6.13%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e-135	-3.113e+02	0.0000	343.0	65.83%	198.2	10.75%
Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer	BCCWTTGTBYKV	1e-130	-3.004e+02	0.0000	428.0	82.15%	439.1	23.81%
Elf4(ETS)/BMDM-Elf4-ChIP-Seq(GSE88699)/Homer	ACTTCCKGKT	1e-130	-3.004e+02	0.0000	347.0	66.60%	219.5	11.90%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e-129	-2.986e+02	0.0000	339.0	65.07%	204.8	11.11%
LCL1(MYBrelated)/colamp-LCL1-DAP-Seq(GSE60143)/Homer	NAAAATATCTWHWWN	1e-124	-2.861e+02	0.0000	274.0	52.59%	100.0	5.42%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e-122	-2.830e+02	0.0000	430.0	82.53%	475.9	25.81%
GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e-121	-2.808e+02	0.0000	207.0	39.73%	24.8	1.34%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e-120	-2.768e+02	0.0000	284.0	54.51%	124.1	6.73%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e-119	-2.745e+02	0.0000	352.0	67.56%	263.8	14.30%
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer	TGTTKCCTAGCAACM	1e-117	-2.711e+02	0.0000	326.0	62.57%	209.9	11.38%
Tcf7(HMG)/GM12878-TCF7-ChIP-Seq(Encode)/Homer	CTTTGATGTGSB	1e-117	-2.705e+02	0.0000	271.0	52.02%	109.3	5.93%
LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer	CCTTTGATST	1e-117	-2.698e+02	0.0000	335.0	64.30%	230.1	12.48%
SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer	CAAGGHCANV	1e-116	-2.672e+02	0.0000	219.0	42.03%	43.4	2.35%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e-115	-2.668e+02	0.0000	211.0	40.50%	35.1	1.90%
NTM1(NAC)/col-NTM1-DAP-Seq(GSE60143)/Homer	ACTTRTARAASAAGT	1e-115	-2.663e+02	0.0000	299.0	57.39%	161.1	8.73%
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer	NGYCATAAAWCH	1e-115	-2.648e+02	0.0000	428.0	82.15%	500.4	27.13%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e-114	-2.644e+02	0.0000	339.0	65.07%	246.8	13.38%
CREB5(bZIP)/LNCaP-CREB5.V5-ChIP-Seq(GSE137775)/Homer	VVATGACGTCAT	1e-114	-2.634e+02	0.0000	275.0	52.78%	122.8	6.66%
ANAC005(NAC)/col-ANAC005-DAP-Seq(GSE60143)/Homer	WVCTTVTWNHABAAG	1e-112	-2.599e+02	0.0000	299.0	57.39%	168.6	9.14%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e-109	-2.510e+02	0.0000	346.0	66.41%	281.5	15.27%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e-105	-2.439e+02	0.0000	429.0	82.34%	543.7	29.48%
GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e-105	-2.425e+02	0.0000	217.0	41.65%	57.3	3.11%
AT2G28920(ND)/col-AT2G28920-DAP-Seq(GSE60143)/Homer	WAGATATTTWTW	1e-104	-2.408e+02	0.0000	286.0	54.89%	165.9	8.99%
RKD2(RWPRK)/colamp-RKD2-DAP-Seq(GSE60143)/Homer	GACKTTTCRDCTTCC	1e-102	-2.362e+02	0.0000	316.0	60.65%	232.3	12.60%
ANAC075(NAC)/col-ANAC075-DAP-Seq(GSE60143)/Homer	CTTSWWNWWSAAGYT	1e-99	-2.297e+02	0.0000	256.0	49.14%	124.7	6.76%
NTM2(NAC)/col-NTM2-DAP-Seq(GSE60143)/Homer	CTTRTNNNAYAAGBH	1e-99	-2.292e+02	0.0000	300.0	57.58%	207.8	11.27%
Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer	BTBRAGTGSN	1e-96	-2.211e+02	0.0000	403.0	77.35%	496.9	26.94%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	ATTTTCCATT	1e-95	-2.191e+02	0.0000	329.0	63.15%	287.7	15.60%
EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer	NRBCARRGGTCA	1e-94	-2.175e+02	0.0000	302.0	57.97%	227.3	12.32%
TEAD1(TEAD)/HepG2-TEAD1-ChIP-Seq(Encode)/Homer	CYRCATTCCA	1e-93	-2.163e+02	0.0000	315.0	60.46%	258.5	14.02%
ANAC062(NAC)/colamp-ANAC062-DAP-Seq(GSE60143)/Homer	TACTTANTNWNYAAG	1e-89	-2.069e+02	0.0000	256.0	49.14%	149.9	8.13%
SND2(NAC)/colamp-SND2-DAP-Seq(GSE60143)/Homer	CTTVWNNNWBAAGNW	1e-88	-2.045e+02	0.0000	294.0	56.43%	228.1	12.37%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e-88	-2.033e+02	0.0000	268.0	51.44%	177.0	9.60%
Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer	NGRTGACGTCAY	1e-87	-2.004e+02	0.0000	238.0	45.68%	125.3	6.79%
ANAC058(NAC)/col-ANAC058-DAP-Seq(GSE60143)/Homer	TWCTTGTDNNACAAG	1e-86	-2.001e+02	0.0000	292.0	56.05%	230.5	12.50%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e-86	-1.989e+02	0.0000	395.0	75.82%	514.6	27.90%
MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer	WNTGCTGASTCAGCANWTTY	1e-86	-1.984e+02	0.0000	204.0	39.16%	75.5	4.10%
STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e-85	-1.979e+02	0.0000	270.0	51.82%	188.0	10.19%
FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer	TRTTTACTTW	1e-85	-1.968e+02	0.0000	341.0	65.45%	355.8	19.29%
ANAC096(NAC)/colamp-ANAC096-DAP-Seq(GSE60143)/Homer	TACTTGWNNNWCAAG	1e-84	-1.939e+02	0.0000	299.0	57.39%	255.9	13.87%
EMB1789(C3H)/col-EMB1789-DAP-Seq(GSE60143)/Homer	TWTTTACCGYND	1e-83	-1.928e+02	0.0000	293.0	56.24%	243.2	13.19%
ANAC028(NAC)/col-ANAC028-DAP-Seq(GSE60143)/Homer	WRCTTGNNNNNCAAG	1e-82	-1.899e+02	0.0000	298.0	57.20%	259.7	14.08%
EPR1(MYBrelated)/colamp-EPR1-DAP-Seq(GSE60143)/Homer	AAATATCT	1e-82	-1.896e+02	0.0000	289.0	55.47%	239.6	12.99%
LHY1(MYBrelated)/col-LHY1-DAP-Seq(GSE60143)/Homer	AAATATCT	1e-82	-1.896e+02	0.0000	289.0	55.47%	239.6	12.99%
ANAC020(NAC)/col-ANAC020-DAP-Seq(GSE60143)/Homer	DVCKTGHNNNDCAAG	1e-82	-1.889e+02	0.0000	293.0	56.24%	249.6	13.53%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e-81	-1.874e+02	0.0000	301.0	57.77%	270.6	14.68%
NAC2(NAC)/colamp-NAC2-DAP-Seq(GSE60143)/Homer	TDCTTGNNNNNCAAG	1e-76	-1.773e+02	0.0000	288.0	55.28%	256.5	13.91%
HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer	TGCCAGCB	1e-76	-1.756e+02	0.0000	304.0	58.35%	297.8	16.15%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e-76	-1.752e+02	0.0000	290.0	55.66%	264.0	14.32%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e-75	-1.745e+02	0.0000	412.0	79.08%	630.0	34.16%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e-75	-1.740e+02	0.0000	332.0	63.72%	373.4	20.25%
At5g52660(MYBrelated)/colamp-At5g52660-DAP-Seq(GSE60143)/Homer	HAAAAATATCTW	1e-75	-1.733e+02	0.0000	292.0	56.05%	272.3	14.76%
ANAC092(NAC)/colamp-ANAC092-DAP-Seq(GSE60143)/Homer	WRCKTGWNNNWCAMG	1e-75	-1.732e+02	0.0000	244.0	46.83%	169.3	9.18%
VND3(NAC)/colamp-VND3-DAP-Seq(GSE60143)/Homer	TRCTTGWDNHWCAAG	1e-74	-1.726e+02	0.0000	299.0	57.39%	290.7	15.76%
GAGA-repeat/SacCer-Promoters/Homer	CTYTCTYTCTCTCTC	1e-74	-1.720e+02	0.0000	461.0	88.48%	843.9	45.76%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e-74	-1.709e+02	0.0000	416.0	79.85%	654.0	35.46%
COUP-TFII(NR)/K562-NR2F1-ChIP-Seq(Encode)/Homer	GKBCARAGGTCA	1e-73	-1.684e+02	0.0000	296.0	56.81%	290.8	15.77%
TEAD3(TEA)/HepG2-TEAD3-ChIP-Seq(Encode)/Homer	TRCATTCCAG	1e-72	-1.676e+02	0.0000	314.0	60.27%	337.2	18.29%
ANAC050(NAC)/colamp-ANAC050-DAP-Seq(GSE60143)/Homer	WNCTTGNNNNNCAAG	1e-72	-1.675e+02	0.0000	253.0	48.56%	195.2	10.58%
COG1(C2C2dof)/col-COG1-DAP-Seq(GSE60143)/Homer	DAAAAAGTGA	1e-71	-1.649e+02	0.0000	415.0	79.65%	664.8	36.05%
TBP3(MYBrelated)/col-TBP3-DAP-Seq(GSE60143)/Homer	VYTAGGGCAN	1e-71	-1.636e+02	0.0000	301.0	57.77%	311.7	16.90%
At3g09600(MYBrelated)/colamp-At3g09600-DAP-Seq(GSE60143)/Homer	AAAATATCTT	1e-70	-1.633e+02	0.0000	289.0	55.47%	282.2	15.30%
SND3(NAC)/col-SND3-DAP-Seq(GSE60143)/Homer	CTTNHNNNDNAAGNH	1e-70	-1.631e+02	0.0000	299.0	57.39%	307.3	16.66%
Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer	GWAAYHTGAKMC	1e-70	-1.620e+02	0.0000	340.0	65.26%	420.3	22.79%
CUC1(NAC)/col-CUC1-DAP-Seq(GSE60143)/Homer	TACTTGTNNNACAAG	1e-67	-1.563e+02	0.0000	240.0	46.07%	185.5	10.06%
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGMATATDC	1e-67	-1.559e+02	0.0000	365.0	70.06%	510.6	27.69%
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer	AGRGGTCA	1e-66	-1.543e+02	0.0000	308.0	59.12%	347.1	18.82%
AT1G69570(C2C2dof)/col-AT1G69570-DAP-Seq(GSE60143)/Homer	WAAAAGTGHH	1e-66	-1.520e+02	0.0000	400.0	76.78%	640.0	34.70%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e-65	-1.516e+02	0.0000	219.0	42.03%	151.5	8.22%
VND4(NAC)/colamp-VND4-DAP-Seq(GSE60143)/Homer	WRCTTGWANWWCAAG	1e-65	-1.503e+02	0.0000	295.0	56.62%	321.3	17.42%
CUC3(NAC)/col-CUC3-DAP-Seq(GSE60143)/Homer	TRCKTGWNNNACAMG	1e-64	-1.496e+02	0.0000	234.0	44.91%	183.8	9.97%
VND1(NAC)/col-VND1-DAP-Seq(GSE60143)/Homer	CTTRWDNHWYAAGYW	1e-64	-1.480e+02	0.0000	307.0	58.93%	357.7	19.39%
ANAC057(NAC)/colamp-ANAC057-DAP-Seq(GSE60143)/Homer	DVCKTGNNNNNCAMG	1e-64	-1.474e+02	0.0000	282.0	54.13%	294.3	15.96%
GTL1(Trihelix)/colamp-GTL1-DAP-Seq(GSE60143)/Homer	WWTTTACCKY	1e-63	-1.460e+02	0.0000	386.0	74.09%	605.6	32.84%
AT3G10113(MYBrelated)/col-AT3G10113-DAP-Seq(GSE60143)/Homer	WNAAATATCWWN	1e-62	-1.441e+02	0.0000	289.0	55.47%	318.0	17.24%
KAN2(G2like)/colamp-KAN2-DAP-Seq(GSE60143)/Homer	ATATTCTY	1e-62	-1.435e+02	0.0000	387.0	74.28%	615.4	33.37%
At1g64620(C2C2dof)/colamp-At1g64620-DAP-Seq(GSE60143)/Homer	CACTTTTT	1e-62	-1.428e+02	0.0000	394.0	75.62%	642.5	34.84%
At4g38000(C2C2dof)/col-At4g38000-DAP-Seq(GSE60143)/Homer	WWWTWACTTTTT	1e-61	-1.425e+02	0.0000	410.0	78.69%	703.4	38.14%
GT2(Trihelix)/colamp-GT2-DAP-Seq(GSE60143)/Homer	AMGGTAAAWWWN	1e-61	-1.407e+02	0.0000	393.0	75.43%	644.5	34.95%
SPL11(SBP)/col100-SPL11-DAP-Seq(GSE60143)/Homer	YTGTACTTBH	1e-60	-1.404e+02	0.0000	283.0	54.32%	310.5	16.84%
At4g01280(MYBrelated)/colamp-At4g01280-DAP-Seq(GSE60143)/Homer	AAATATCT	1e-60	-1.404e+02	0.0000	292.0	56.05%	333.9	18.10%
DAG2(C2C2dof)/col-DAG2-DAP-Seq(GSE60143)/Homer	WWTTHACTTTTT	1e-60	-1.382e+02	0.0000	436.0	83.69%	822.5	44.60%
OBP4(C2C2dof)/col-OBP4-DAP-Seq(GSE60143)/Homer	WTTHACTTTTTB	1e-59	-1.374e+02	0.0000	420.0	80.61%	757.8	41.09%
BBX31(Orphan)/col-BBX31-DAP-Seq(GSE60143)/Homer	NAAAAAGTDA	1e-58	-1.356e+02	0.0000	417.0	80.04%	750.2	40.68%
dof43(C2C2dof)/colamp-dof43-DAP-Seq(GSE60143)/Homer	NAAAAAGTDA	1e-58	-1.355e+02	0.0000	405.0	77.74%	703.1	38.13%
SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e-58	-1.349e+02	0.0000	403.0	77.35%	697.4	37.81%
SOL1(CPP)/colamp-SOL1-DAP-Seq(GSE60143)/Homer	ATTTAAATHN	1e-58	-1.344e+02	0.0000	393.0	75.43%	661.4	35.86%
AT5G02460(C2C2dof)/col-AT5G02460-DAP-Seq(GSE60143)/Homer	CHCCTTTT	1e-57	-1.319e+02	0.0000	432.0	82.92%	823.8	44.67%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e-56	-1.311e+02	0.0000	410.0	78.69%	735.4	39.88%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e-56	-1.309e+02	0.0000	259.0	49.71%	270.3	14.65%
ANAC071(NAC)/col-ANAC071-DAP-Seq(GSE60143)/Homer	DNCKTNDNNNHNAAG	1e-56	-1.306e+02	0.0000	298.0	57.20%	370.8	20.11%
Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e-56	-1.302e+02	0.0000	270.0	51.82%	298.6	16.19%
dof24(C2C2dof)/col-dof24-DAP-Seq(GSE60143)/Homer	TWMCTTTTTG	1e-55	-1.278e+02	0.0000	427.0	81.96%	814.7	44.18%
PABPC1(?)/MEL-PABC1-CLIP-Seq(GSE69755)/Homer	HAATAAAGNN	1e-55	-1.273e+02	0.0000	440.0	84.45%	872.7	47.32%
LBD19(LOBAS2)/colamp-LBD19-DAP-Seq(GSE60143)/Homer	CCKGAAWTTCMGGAW	1e-54	-1.263e+02	0.0000	379.0	72.74%	633.4	34.34%
TCX2(CPP)/colamp-TCX2-DAP-Seq(GSE60143)/Homer	NNWWTTYRAAHN	1e-54	-1.262e+02	0.0000	393.0	75.43%	684.6	37.12%
VND2(NAC)/col-VND2-DAP-Seq(GSE60143)/Homer	DNCKTNNNNNNNAAG	1e-54	-1.259e+02	0.0000	300.0	57.58%	386.7	20.97%
Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer	HAWGRGGCCM	1e-54	-1.250e+02	0.0000	306.0	58.73%	405.8	22.00%
RBFox2(?)/Heart-RBFox2-CLIP-Seq(GSE57926)/Homer	TGCATGCA	1e-53	-1.243e+02	0.0000	345.0	66.22%	524.9	28.46%
CCA(Myb)/Arabidopsis-CCA.GFP-ChIP-Seq(GSE70533)/Homer	AGATATYTTT	1e-53	-1.223e+02	0.0000	322.0	61.80%	458.6	24.87%
ANAC083(NAC)/col-ANAC083-DAP-Seq(GSE60143)/Homer	CKTRWNNNWYAMGTA	1e-52	-1.211e+02	0.0000	297.0	57.01%	389.2	21.10%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e-52	-1.208e+02	0.0000	263.0	50.48%	300.1	16.27%
At3g45610(C2C2dof)/col-At3g45610-DAP-Seq(GSE60143)/Homer	TWACTTTTTS	1e-52	-1.207e+02	0.0000	393.0	75.43%	700.9	38.00%
SMB(NAC)/colamp-SMB-DAP-Seq(GSE60143)/Homer	CTTVNNNNDBAAGHW	1e-52	-1.203e+02	0.0000	301.0	57.77%	402.6	21.83%
Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer	HNRAATCAAT	1e-52	-1.200e+02	0.0000	284.0	54.51%	356.7	19.34%
HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer	TTTTATKRGG	1e-50	-1.174e+02	0.0000	369.0	70.83%	623.9	33.83%
NST1(NAC)/colamp-NST1-DAP-Seq(GSE60143)/Homer	WRCTTRWWNWWYAAG	1e-50	-1.173e+02	0.0000	311.0	59.69%	438.4	23.77%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e-50	-1.167e+02	0.0000	286.0	54.89%	369.1	20.01%
AT2G28810(C2C2dof)/colamp-AT2G28810-DAP-Seq(GSE60143)/Homer	VAAAAAGTWA	1e-49	-1.132e+02	0.0000	438.0	84.07%	907.7	49.22%
CDF3(C2C2dof)/colamp-CDF3-DAP-Seq(GSE60143)/Homer	AAAAGTRM	1e-48	-1.120e+02	0.0000	399.0	76.58%	749.6	40.65%
ARF2(ARF)/col-ARF2-DAP-Seq(GSE60143)/Homer	TTGTCGGMWN	1e-48	-1.115e+02	0.0000	367.0	70.44%	633.8	34.37%
RVE1(MYBrelated)/col-RVE1-DAP-Seq(GSE60143)/Homer	AAATATCT	1e-47	-1.100e+02	0.0000	297.0	57.01%	416.4	22.58%
VND6(NAC)/col-VND6-DAP-Seq(GSE60143)/Homer	DCTTNHTTTTYAMGY	1e-46	-1.074e+02	0.0000	306.0	58.73%	449.4	24.37%
At1g76110(ARID)/colamp-At1g76110-DAP-Seq(GSE60143)/Homer	ATTTAATG	1e-45	-1.047e+02	0.0000	310.0	59.50%	468.5	25.41%
CES-1(Homeobox)/cElegans-L1-CES1-ChIP-Seq(modEncode)/Homer	AAATTSAATTTN	1e-45	-1.038e+02	0.0000	291.0	55.85%	415.1	22.51%
AT5G47660(Trihelix)/colamp-AT5G47660-DAP-Seq(GSE60143)/Homer	AWTTTTACCG	1e-44	-1.021e+02	0.0000	390.0	74.86%	746.7	40.49%
Adof1(C2C2dof)/col-Adof1-DAP-Seq(GSE60143)/Homer	NRWAAAGYDV	1e-43	-1.010e+02	0.0000	476.0	91.36%	1136.0	61.60%
AT5G63260(C3H)/col-AT5G63260-DAP-Seq(GSE60143)/Homer	RAAAAAGTRA	1e-43	-9.966e+01	0.0000	446.0	85.60%	989.3	53.64%
NGA4(ABI3VP1)/col-NGA4-DAP-Seq(GSE60143)/Homer	TKNTCAGGTG	1e-42	-9.817e+01	0.0000	325.0	62.38%	533.6	28.93%
PHA-4(Forkhead)/cElegans-Embryos-PHA4-ChIP-Seq(modEncode)/Homer	KTGTTTGC	1e-41	-9.601e+01	0.0000	436.0	83.69%	956.3	51.85%
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer	TRAGGTCA	1e-41	-9.515e+01	0.0000	399.0	76.58%	804.7	43.63%
AT5G66940(C2C2dof)/col-AT5G66940-DAP-Seq(GSE60143)/Homer	NNHACTTTWT	1e-40	-9.418e+01	0.0000	435.0	83.49%	958.0	51.95%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e-40	-9.390e+01	0.0000	99.0	19.00%	32.6	1.77%
AT1G72740(MYBrelated)/colamp-AT1G72740-DAP-Seq(GSE60143)/Homer	NNWWAMCCTAAHWNN	1e-40	-9.380e+01	0.0000	309.0	59.31%	496.6	26.93%
dof45(C2C2dof)/col-dof45-DAP-Seq(GSE60143)/Homer	NVAWAAAGTN	1e-40	-9.375e+01	0.0000	466.0	89.44%	1108.1	60.08%
Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer	NNYTAATTAR	1e-40	-9.317e+01	0.0000	389.0	74.66%	772.1	41.87%
Dlx3(Homeobox)/Kerainocytes-Dlx3-ChIP-Seq(GSE89884)/Homer	NDGTAATTAC	1e-40	-9.286e+01	0.0000	333.0	63.92%	575.6	31.21%
AT3G52440(C2C2dof)/colamp-AT3G52440-DAP-Seq(GSE60143)/Homer	DTHACTTTTT	1e-39	-9.185e+01	0.0000	448.0	85.99%	1026.4	55.65%
Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer	NTAATBNAATTA	1e-38	-8.965e+01	0.0000	290.0	55.66%	451.9	24.51%
AT3G51470(DBP)/col-AT3G51470-DAP-Seq(GSE60143)/Homer	TTWHGGTGCACC	1e-38	-8.948e+01	0.0000	334.0	64.11%	589.5	31.97%
AT3G12130(C3H)/colamp-AT3G12130-DAP-Seq(GSE60143)/Homer	TMACTTTTTV	1e-37	-8.742e+01	0.0000	440.0	84.45%	1005.9	54.54%
Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer	TTTTATGGCM	1e-37	-8.699e+01	0.0000	444.0	85.22%	1025.5	55.61%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e-37	-8.699e+01	0.0000	286.0	54.89%	447.8	24.28%
Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer	NCYAATAAAA	1e-37	-8.650e+01	0.0000	391.0	75.05%	803.0	43.54%
ASL18(LOBAS2)/colamp-ASL18-DAP-Seq(GSE60143)/Homer	CCGGAAAWTCMGGAR	1e-37	-8.580e+01	0.0000	254.0	48.75%	360.4	19.54%
ANAC070(NAC)/colamp-ANAC070-DAP-Seq(GSE60143)/Homer	CTTRHDNHNBAAGHW	1e-36	-8.474e+01	0.0000	311.0	59.69%	530.2	28.75%
SeqBias: GA-repeat	GAGAGAGAGA	1e-36	-8.451e+01	0.0000	467.0	89.64%	1148.0	62.25%
AT2G38300(G2like)/col-AT2G38300-DAP-Seq(GSE60143)/Homer	ADRGAATGTT	1e-36	-8.436e+01	0.0000	345.0	66.22%	643.8	34.91%
AT1G20910(ARID)/col-AT1G20910-DAP-Seq(GSE60143)/Homer	THAATTRAWN	1e-36	-8.432e+01	0.0000	418.0	80.23%	920.1	49.89%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e-36	-8.393e+01	0.0000	54.0	10.36%	0.5	0.03%
ATHB34(ZFHD)/colamp-ATHB34-DAP-Seq(GSE60143)/Homer	TRATTARS	1e-35	-8.214e+01	0.0000	336.0	64.49%	620.1	33.62%
ANAC045(NAC)/col-ANAC045-DAP-Seq(GSE60143)/Homer	DNCKTVNNNNNNAMG	1e-35	-8.148e+01	0.0000	338.0	64.88%	629.5	34.14%
At5g66730(C2H2)/colamp-At5g66730-DAP-Seq(GSE60143)/Homer	TTTGTCKTTTTK	1e-35	-8.125e+01	0.0000	136.0	26.10%	102.4	5.55%
Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer	VGCCATAAAA	1e-35	-8.113e+01	0.0000	439.0	84.26%	1024.3	55.54%
ANAC046(NAC)/colamp-ANAC046-DAP-Seq(GSE60143)/Homer	ACACGYWAYC	1e-35	-8.092e+01	0.0000	419.0	80.42%	937.4	50.83%
OBP1(C2C2dof)/col-OBP1-DAP-Seq(GSE60143)/Homer	NHHACTTTWT	1e-34	-7.949e+01	0.0000	471.0	90.40%	1187.8	64.41%
At5g62940(C2C2dof)/col-At5g62940-DAP-Seq(GSE60143)/Homer	WHWHHACTTTTT	1e-34	-7.922e+01	0.0000	478.0	91.75%	1226.5	66.51%
SGR5(C2H2)/colamp-SGR5-DAP-Seq(GSE60143)/Homer	TTTGTCTTTTTT	1e-32	-7.488e+01	0.0000	186.0	35.70%	217.5	11.79%
AT1G47655(C2C2dof)/colamp-AT1G47655-DAP-Seq(GSE60143)/Homer	YHACTTTTTS	1e-32	-7.449e+01	0.0000	481.0	92.32%	1261.7	68.42%
FHY3(FAR1)/Arabidopsis-FHY3-ChIP-Seq(GSE30711)/Homer	HHCACGCGCBTN	1e-32	-7.446e+01	0.0000	118.0	22.65%	81.8	4.43%
ATHB24(ZFHD)/colamp-ATHB24-DAP-Seq(GSE60143)/Homer	TAATTAAS	1e-32	-7.420e+01	0.0000	315.0	60.46%	579.0	31.39%
AtGRF6(GRF)/col-AtGRF6-DAP-Seq(GSE60143)/Homer	NTGTCAGADNNNNNN	1e-31	-7.365e+01	0.0000	228.0	43.76%	324.9	17.62%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e-31	-7.270e+01	0.0000	419.0	80.42%	969.9	52.59%
ATHB23(ZFHD)/col-ATHB23-DAP-Seq(GSE60143)/Homer	HTAATTARNN	1e-31	-7.267e+01	0.0000	337.0	64.68%	657.1	35.63%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e-31	-7.181e+01	0.0000	361.0	69.29%	745.7	40.44%
DLX5(Homeobox)/BasalGanglia-Dlx5-ChIP-seq(GSE124936)/Homer	SSTAATTA	1e-30	-7.103e+01	0.0000	339.0	65.07%	670.2	36.34%
ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer	TGGAACAGMA	1e-28	-6.563e+01	0.0000	135.0	25.91%	127.9	6.94%
Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer	CYHATAAAAN	1e-28	-6.528e+01	0.0000	436.0	83.69%	1074.9	58.29%
LHY(Myb)/Seedling-LHY-ChIP-Seq(GSE52175)/Homer	ADAAATATCT	1e-28	-6.475e+01	0.0000	322.0	61.80%	636.6	34.52%
BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer	NHAACBGYYV	1e-27	-6.414e+01	0.0000	321.0	61.61%	635.1	34.44%
Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer	TTRAGTGSYK	1e-27	-6.322e+01	0.0000	310.0	59.50%	603.0	32.70%
LHX9(Homeobox)/Hct116-LHX9.V5-ChIP-Seq(GSE116822)/Homer	NGCTAATTAG	1e-27	-6.304e+01	0.0000	383.0	73.51%	863.1	46.80%
AT2G40260(G2like)/colamp-AT2G40260-DAP-Seq(GSE60143)/Homer	WAAAYATTCTTT	1e-26	-6.137e+01	0.0000	350.0	67.18%	747.4	40.53%
Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer	TATTGAYY	1e-25	-5.888e+01	0.0000	299.0	57.39%	583.8	31.66%
At3g60580(C2H2)/col-At3g60580-DAP-Seq(GSE60143)/Homer	WTTYTACT	1e-24	-5.709e+01	0.0000	483.0	92.71%	1343.3	72.84%
VIP1(bZIP)/col-VIP1-DAP-Seq(GSE60143)/Homer	NTTGACAGCTGTCAN	1e-23	-5.452e+01	0.0000	62.0	11.90%	23.1	1.25%
OBP3(C2C2dof)/col-OBP3-DAP-Seq(GSE60143)/Homer	NYWACTTTTT	1e-23	-5.424e+01	0.0000	444.0	85.22%	1159.2	62.86%
caudal(Homeobox)/Drosophila-Embryos-ChIP-Chip(modEncode)/Homer	GGYCATAAAW	1e-23	-5.365e+01	0.0000	249.0	47.79%	448.3	24.31%
SeqBias: TA-repeat	TATATATATA	1e-23	-5.341e+01	0.0000	468.0	89.83%	1279.8	69.40%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e-23	-5.335e+01	0.0000	95.0	18.23%	74.9	4.06%
ANAC038(NAC)/col-ANAC038-DAP-Seq(GSE60143)/Homer	ACACGTWAYC	1e-23	-5.332e+01	0.0000	382.0	73.32%	902.3	48.93%
IDD4(C2H2)/col-IDD4-DAP-Seq(GSE60143)/Homer	TTTGTCTTTWTB	1e-22	-5.227e+01	0.0000	190.0	36.47%	288.4	15.64%
MGP(C2H2)/colamp-MGP-DAP-Seq(GSE60143)/Homer	TTTTGTCGTTTW	1e-21	-5.061e+01	0.0000	111.0	21.31%	109.6	5.94%
bZIP18(bZIP)/colamp-bZIP18-DAP-Seq(GSE60143)/Homer	KGMCAGCTND	1e-20	-4.798e+01	0.0000	415.0	79.65%	1061.1	57.54%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e-20	-4.798e+01	0.0000	296.0	56.81%	619.3	33.58%
KANADI1(Myb)/Seedling-KAN1-ChIP-Seq(GSE48081)/Homer	ARGAATAWWN	1e-20	-4.744e+01	0.0000	323.0	62.00%	713.6	38.69%
IDD7(C2H2)/col-IDD7-DAP-Seq(GSE60143)/Homer	TTTGTCKTTTTN	1e-18	-4.244e+01	0.0000	121.0	23.22%	149.1	8.08%
En1(Homeobox)/SUM149-EN1-ChIP-Seq(GSE120957)/Homer	NDCTAATTAS	1e-18	-4.225e+01	0.0000	401.0	76.97%	1032.3	55.97%
ATHB25(ZFHD)/colamp-ATHB25-DAP-Seq(GSE60143)/Homer	TAATTAVB	1e-18	-4.201e+01	0.0000	337.0	64.68%	789.4	42.81%
HuR(?)/HEK293-HuR-CLIP-Seq(GSE87887)/Homer	BTTTGGTTTG	1e-17	-4.121e+01	0.0000	422.0	81.00%	1125.6	61.04%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e-17	-4.019e+01	0.0000	90.0	17.27%	89.9	4.87%
AGL25(MADS)/colamp-AGL25-DAP-Seq(GSE60143)/Homer	TTTCCATWTWTGGAA	1e-17	-4.016e+01	0.0000	49.0	9.40%	21.0	1.14%
AT5G60130(ABI3VP1)/col-AT5G60130-DAP-Seq(GSE60143)/Homer	WTTYTAAGVAAA	1e-16	-3.907e+01	0.0000	312.0	59.88%	717.0	38.88%
ERF3(AP2EREBP)/colamp-ERF3-DAP-Seq(GSE60143)/Homer	ATGGCGGCGG	1e-16	-3.881e+01	0.0000	94.0	18.04%	100.3	5.44%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer	CCATATATGGNM	1e-16	-3.812e+01	0.0000	106.0	20.35%	127.0	6.89%
AT5G45580(G2like)/colamp-AT5G45580-DAP-Seq(GSE60143)/Homer	ADRGAATCTH	1e-16	-3.763e+01	0.0000	313.0	60.08%	727.9	39.47%
THRb(NR)/HepG2-THRb.Flag-ChIP-Seq(Encode)/Homer	GGTCACCTGAGGTCA	1e-16	-3.745e+01	0.0000	56.0	10.75%	34.1	1.85%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e-15	-3.583e+01	0.0000	327.0	62.76%	786.6	42.66%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e-15	-3.576e+01	0.0000	365.0	70.06%	926.4	50.24%
DLX2(Homeobox)/BasalGanglia-Dlx2-ChIP-seq(GSE124936)/Homer	NNNTAATTAS	1e-15	-3.574e+01	0.0000	378.0	72.55%	976.6	52.95%
LBD18(LOBAS2)/colamp-LBD18-DAP-Seq(GSE60143)/Homer	CKGAWWTTCHGS	1e-15	-3.569e+01	0.0000	367.0	70.44%	934.6	50.68%
SEP3(MADS)/Arabidoposis-Flower-Sep3-ChIP-Seq/Homer	CCAAAAAGGG	1e-14	-3.399e+01	0.0000	221.0	42.42%	447.2	24.25%
AGL16(MADS)/col-AGL16-DAP-Seq(GSE60143)/Homer	TWCCHWATWDGGAAA	1e-14	-3.397e+01	0.0000	62.0	11.90%	49.9	2.70%
AGL15(MADS)/col-AGL15-DAP-Seq(GSE60143)/Homer	TTTCCHWATWDGGAA	1e-14	-3.331e+01	0.0000	79.0	15.16%	82.7	4.48%
AT2G33550(Trihelix)/colamp-AT2G33550-DAP-Seq(GSE60143)/Homer	TTTAAGGGCAYTTTT	1e-14	-3.323e+01	0.0000	363.0	69.67%	933.9	50.64%
RRTF1(AP2EREBP)/colamp-RRTF1-DAP-Seq(GSE60143)/Homer	CCGCCGCHATTT	1e-13	-3.220e+01	0.0000	93.0	17.85%	114.9	6.23%
AGL6(MADS)/col-AGL6-DAP-Seq(GSE60143)/Homer	TTWCCWWAWWDGGWA	1e-13	-3.197e+01	0.0000	78.0	14.97%	83.6	4.53%
DLX1(Homeobox)/BasalGanglia-Dlx1-ChIP-seq(GSE124936)/Homer	NSNNTAATTA	1e-13	-3.072e+01	0.0000	351.0	67.37%	903.4	48.99%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e-12	-2.904e+01	0.0000	176.0	33.78%	338.4	18.35%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e-12	-2.808e+01	0.0000	82.0	15.74%	101.7	5.52%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e-12	-2.772e+01	0.0000	132.0	25.34%	223.4	12.12%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e-11	-2.762e+01	0.0000	37.0	7.10%	19.3	1.04%
ABI5(bZIP)/col-ABI5-DAP-Seq(GSE60143)/Homer	GCCACGTG	1e-11	-2.601e+01	0.0000	72.0	13.82%	85.7	4.65%
LBD13(LOBAS2)/colamp-LBD13-DAP-Seq(GSE60143)/Homer	KCCGTNWTTTBCGGC	1e-11	-2.596e+01	0.0000	115.0	22.07%	186.2	10.09%
SOC1(MADS)/Seedling-SOC1-ChIP-Seq(GSE45846)/Homer	TWCCAWWTWTGG	1e-10	-2.430e+01	0.0000	116.0	22.26%	195.1	10.58%
SPCH(bHLH)/Seedling-SPCH-ChIP-Seq(GSE57497)/Homer	WNBCACGTGA	1e-10	-2.371e+01	0.0000	143.0	27.45%	271.0	14.69%
ETV4(ETS)/HepG2-ETV4-ChIP-Seq(ENCODE)/Homer	ACCGGAAGTG	1e-9	-2.265e+01	0.0000	121.0	23.22%	215.3	11.67%
E-box/Arabidopsis-Promoters/Homer	GCCACGTG	1e-9	-2.097e+01	0.0000	71.0	13.63%	97.3	5.27%
VRN1(ABI3VP1)/col-VRN1-DAP-Seq(GSE60143)/Homer	TTTTTTTTTT	1e-9	-2.084e+01	0.0000	26.0	4.99%	12.8	0.69%
SeqBias: polyC-repeat	CCCCCCCCCC	1e-8	-2.046e+01	0.0000	503.0	96.55%	1631.4	88.46%
Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer	TYTGACCASWRG	1e-8	-2.001e+01	0.0000	74.0	14.20%	107.5	5.83%
SVP(MADS)/col-SVP-DAP-Seq(GSE60143)/Homer	ANTTWCCHAATTTGG	1e-8	-1.940e+01	0.0000	141.0	27.06%	286.8	15.55%
ABF2(bZIP)/col-ABF2-DAP-Seq(GSE60143)/Homer	KGMCACGTGDCMHHH	1e-8	-1.855e+01	0.0000	49.0	9.40%	56.7	3.07%
TAGL1(MADS)/Tomato-TAGL1-ChIP-Seq(GSE116581)/Homer	CCAAAAATRG	1e-7	-1.826e+01	0.0000	213.0	40.88%	512.4	27.78%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e-7	-1.773e+01	0.0000	135.0	25.91%	278.5	15.10%
ATHB33(ZFHD)/col-ATHB33-DAP-Seq(GSE60143)/Homer	NGTRATTAAK	1e-7	-1.768e+01	0.0000	307.0	58.93%	835.0	45.28%
CELF2(RRM)/JSL1-CELF2-CLIP-Seq(GSE71264)/Homer	RGTGTCAG	1e-7	-1.738e+01	0.0000	55.0	10.56%	72.1	3.91%
ERF11(AP2EREBP)/col-ERF11-DAP-Seq(GSE60143)/Homer	RTGGCGGCGG	1e-7	-1.715e+01	0.0000	94.0	18.04%	169.0	9.16%
REM19(REM)/colamp-REM19-DAP-Seq(GSE60143)/Homer	AAAAAAAA	1e-7	-1.690e+01	0.0000	107.0	20.54%	204.5	11.09%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e-6	-1.573e+01	0.0000	90.0	17.27%	164.1	8.90%
Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer	GCTATTTTTAGC	1e-6	-1.551e+01	0.0000	52.0	9.98%	71.0	3.85%
GBF6(bZIP)/colamp-GBF6-DAP-Seq(GSE60143)/Homer	WWTGMCACGTCABCW	1e-6	-1.536e+01	0.0000	50.0	9.60%	67.4	3.65%
RLR1?/SacCer-Promoters/Homer	WTTTTCYYTTTT	1e-6	-1.526e+01	0.0000	80.0	15.36%	140.4	7.61%
Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer	VVRRAACAATGG	1e-6	-1.453e+01	0.0000	60.0	11.52%	93.8	5.09%
SPL15(SBP)/colamp-SPL15-DAP-Seq(GSE60143)/Homer	WDWMMGTACADW	1e-6	-1.442e+01	0.0000	302.0	57.97%	844.7	45.80%
ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer	GNCTGTASTRNTGBCTCHTT	1e-6	-1.433e+01	0.0000	15.0	2.88%	5.2	0.28%
bZIP28(bZIP)/col-bZIP28-DAP-Seq(GSE60143)/Homer	TGCCACGTSABH	1e-6	-1.432e+01	0.0000	49.0	9.40%	69.0	3.74%
SeqBias: GCW-triplet	GCWGCWGCWGCW	1e-6	-1.414e+01	0.0000	517.0	99.23%	1752.9	95.05%
bZIP16(bZIP)/colamp-bZIP16-DAP-Seq(GSE60143)/Homer	TGCCACGTGD	1e-6	-1.410e+01	0.0000	50.0	9.60%	71.3	3.87%
AGL13(MADS)/col-AGL13-DAP-Seq(GSE60143)/Homer	TWCCAWWTWTGGWAA	1e-5	-1.352e+01	0.0000	34.0	6.53%	38.5	2.09%
AZF1(C2H2)/colamp-AZF1-DAP-Seq(GSE60143)/Homer	DKSWCACT	1e-5	-1.326e+01	0.0000	390.0	74.86%	1181.5	64.07%
MYB10(MYB)/col-MYB10-DAP-Seq(GSE60143)/Homer	YCCACCTACCHH	1e-5	-1.326e+01	0.0000	81.0	15.55%	152.3	8.26%
IDD5(C2H2)/colamp-IDD5-DAP-Seq(GSE60143)/Homer	TTTTGTCTTTTTBTK	1e-5	-1.231e+01	0.0000	88.0	16.89%	176.6	9.58%
AT1G23810(Orphan)/col-AT1G23810-DAP-Seq(GSE60143)/Homer	TTCTAGAAGSTTCTA	1e-5	-1.227e+01	0.0000	22.0	4.22%	18.4	1.00%
bHLH80(bHLH)/col-bHLH80-DAP-Seq(GSE60143)/Homer	NNNNDCAASTTGHNN	1e-5	-1.185e+01	0.0000	96.0	18.43%	201.6	10.93%
SPL9(SBP)/colamp-SPL9-DAP-Seq(GSE60143)/Homer	BTGTACTT	1e-5	-1.157e+01	0.0000	317.0	60.84%	925.4	50.18%
At3g24120(G2like)/col-At3g24120-DAP-Seq(GSE60143)/Homer	NWWAGMATMW	1e-4	-1.147e+01	0.0000	373.0	71.59%	1133.6	61.47%
bZIP48(bZIP)/colamp-bZIP48-DAP-Seq(GSE60143)/Homer	DDWWKVTSACGTGGC	1e-4	-1.132e+01	0.0000	52.0	9.98%	86.1	4.67%
HSFB4(HSF)/col-HSFB4-DAP-Seq(GSE60143)/Homer	TTCTAGAAGCTTCTA	1e-4	-1.122e+01	0.0001	22.0	4.22%	20.0	1.08%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	MACAGGAAGT	1e-4	-1.117e+01	0.0001	37.0	7.10%	51.7	2.80%
GBF5(bZIP)/colamp-GBF5-DAP-Seq(GSE60143)/Homer	WKNWSACGTGGCAWN	1e-4	-1.109e+01	0.0001	50.0	9.60%	82.7	4.48%
ABF1(bZIP)/Arabidopsis-ABF1-ChIP-Seq(GSE80564)/Homer	CACGTGGC	1e-4	-1.105e+01	0.0001	76.0	14.59%	150.7	8.17%
At2g01060(G2like)/colamp-At2g01060-DAP-Seq(GSE60143)/Homer	AGATKCBNWW	1e-4	-1.104e+01	0.0001	386.0	74.09%	1187.7	64.40%
FRS9(ND)/col-FRS9-DAP-Seq(GSE60143)/Homer	RGAGAGAGAAAG	1e-4	-1.066e+01	0.0001	18.0	3.45%	14.2	0.77%
NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer	GGAAATTCCC	1e-4	-1.048e+01	0.0001	16.0	3.07%	11.4	0.62%
Hoxa9(Homeobox)/ChickenMSG-Hoxa9.Flag-ChIP-Seq(GSE86088)/Homer	RGCAATNAAA	1e-4	-1.038e+01	0.0001	332.0	63.72%	992.3	53.81%
Unknown4/Arabidopsis-Promoters/Homer	CKTCKTCTTY	1e-4	-1.034e+01	0.0001	103.0	19.77%	231.8	12.57%
GRF9(GRF)/colamp-GRF9-DAP-Seq(GSE60143)/Homer	NWCTGACANNNNNNN	1e-4	-1.028e+01	0.0001	96.0	18.43%	211.2	11.45%
RIN(MADS)/Tomato-RIN-ChIP-Seq(GSE116581)/Homer	CYAAAAWWGG	1e-4	-1.025e+01	0.0001	215.0	41.27%	585.7	31.76%
EGL-5(Homeobox)/cElegans-L3-EGL5-ChIP-Seq(modEncode)/Homer	ATTTAATGGG	1e-4	-1.002e+01	0.0002	253.0	48.56%	716.6	38.86%
SeqBias: A/T bias	WWWWWWWWWW	1e-4	-9.905e+00	0.0002	517.0	99.23%	1772.7	96.12%
IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer	GRAASTGAAAST	1e-4	-9.902e+00	0.0002	39.0	7.49%	60.2	3.26%
SPL1(SBP)/colamp-SPL1-DAP-Seq(GSE60143)/Homer	HYGTACDTWH	1e-4	-9.773e+00	0.0002	315.0	60.46%	937.7	50.85%
GAGA-repeat/Arabidopsis-Promoters/Homer	CTCTCTCTCY	1e-4	-9.556e+00	0.0003	66.0	12.67%	131.2	7.11%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e-3	-8.873e+00	0.0005	116.0	22.26%	281.9	15.29%
bZIP68(bZIP)/col-bZIP68-DAP-Seq(GSE60143)/Homer	WGCCACGTGK	1e-3	-8.851e+00	0.0005	50.0	9.60%	92.1	4.99%
MYB63(MYB)/col-MYB63-DAP-Seq(GSE60143)/Homer	BHYACCWACCHH	1e-3	-8.815e+00	0.0005	72.0	13.82%	152.1	8.25%
ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer	TGGGGAAGGGCM	1e-3	-8.491e+00	0.0007	33.0	6.33%	51.3	2.78%
CDM1(C3H)/colamp-CDM1-DAP-Seq(GSE60143)/Homer	CCGAWAWTWTCGGAN	1e-3	-8.400e+00	0.0008	48.0	9.21%	89.4	4.85%
SeqBias: CA-repeat	CACACACACA	1e-3	-8.248e+00	0.0009	305.0	58.54%	919.9	49.88%
AREB3(bZIP)/col-AREB3-DAP-Seq(GSE60143)/Homer	NKGMCACGTGDCMNN	1e-3	-7.877e+00	0.0013	50.0	9.60%	97.3	5.27%
HSFA1E(HSF)/col-HSFA1E-DAP-Seq(GSE60143)/Homer	TTCTAGAAGCTTCTA	1e-3	-7.605e+00	0.0017	23.0	4.41%	31.9	1.73%
Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer	AGGVNCCTTTGT	1e-3	-7.499e+00	0.0019	81.0	15.55%	187.6	10.17%
Unknown1/Arabidopsis-Promoters/Homer	RGGGTAWWWTHGTAA	1e-3	-7.359e+00	0.0022	34.0	6.53%	58.8	3.19%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e-3	-7.331e+00	0.0022	17.0	3.26%	19.6	1.06%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e-3	-7.052e+00	0.0030	144.0	27.64%	386.1	20.94%
bZIP53(bZIP)/colamp-bZIP53-DAP-Seq(GSE60143)/Homer	NDNHSACGTGKMNNN	1e-3	-6.992e+00	0.0031	50.0	9.60%	102.5	5.56%
AGL95(ND)/col-AGL95-DAP-Seq(GSE60143)/Homer	TTCTAGAAGCTTCTA	1e-2	-6.515e+00	0.0050	24.0	4.61%	37.2	2.02%
ERF4(AP2EREBP)/colamp-ERF4-DAP-Seq(GSE60143)/Homer	WDWTGGCGGCGG	1e-2	-6.236e+00	0.0066	96.0	18.43%	243.9	13.23%
PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	GGAAGTGAAAST	1e-2	-6.225e+00	0.0067	21.0	4.03%	31.6	1.72%
SeqBias: G/A bias	RRRRRRRRRR	1e-2	-6.204e+00	0.0068	518.0	99.42%	1797.6	97.47%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e-2	-6.147e+00	0.0072	73.0	14.01%	175.0	9.49%
bZIP3(bZIP)/col-bZIP3-DAP-Seq(GSE60143)/Homer	DWKNHSACGTGGCAD	1e-2	-5.907e+00	0.0091	56.0	10.75%	126.7	6.87%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e-2	-5.735e+00	0.0108	111.0	21.31%	295.7	16.03%
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e-2	-5.518e+00	0.0133	24.0	4.61%	41.2	2.24%
AT5G05550(Trihelix)/col-AT5G05550-DAP-Seq(GSE60143)/Homer	HDNHDTCKCCGGMGA	1e-2	-5.331e+00	0.0160	157.0	30.13%	449.7	24.39%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e-2	-5.111e+00	0.0199	395.0	75.82%	1293.7	70.15%
SeqBias: C/A-bias	MMMMMMMMMM	1e-2	-5.012e+00	0.0219	514.0	98.66%	1781.5	96.60%
Unknown6/Drosophila-Promoters/Homer	AATTTTAAAA	1e-2	-4.998e+00	0.0221	127.0	24.38%	355.4	19.27%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e-2	-4.841e+00	0.0258	18.0	3.45%	29.5	1.60%
At5g08750(C3H)/col-At5g08750-DAP-Seq(GSE60143)/Homer	NWDTTGCGGCTR	1e-1	-4.537e+00	0.0349	115.0	22.07%	322.6	17.49%
ERF7(AP2EREBP)/col-ERF7-DAP-Seq(GSE60143)/Homer	ATGRCGGCGG	1e-1	-4.499e+00	0.0361	99.0	19.00%	271.5	14.72%
REF6(Zf)/Arabidopsis-REF6-ChIP-Seq(GSE106942)/Homer	TVCTCTGTTT	1e-1	-4.440e+00	0.0381	47.0	9.02%	111.9	6.07%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e-1	-4.218e+00	0.0475	157.0	30.13%	465.1	25.22%
TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer	CCWGGAATGY	1e-1	-4.214e+00	0.0475	44.0	8.45%	104.4	5.66%
HSF7(HSF)/colamp-HSF7-DAP-Seq(GSE60143)/Homer	TTCTAGAAGCTTCTA	1e-1	-4.150e+00	0.0505	31.0	5.95%	67.7	3.67%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e-1	-4.047e+00	0.0558	25.0	4.80%	51.9	2.81%
EIN3(EIL)/col-EIN3-DAP-Seq(GSE60143)/Homer	ARATTCAATGWATYT	1e-1	-3.903e+00	0.0642	29.0	5.57%	63.2	3.43%
MYB62(MYB)/colamp-MYB62-DAP-Seq(GSE60143)/Homer	NTACCTAACT	1e-1	-3.890e+00	0.0649	175.0	33.59%	531.1	28.80%
ABR1(AP2EREBP)/colamp-ABR1-DAP-Seq(GSE60143)/Homer	AAATGGCGGCGG	1e-1	-3.836e+00	0.0683	97.0	18.62%	273.8	14.85%
ERF8(AP2EREBP)/colamp-ERF8-DAP-Seq(GSE60143)/Homer	CGCCGYCATW	1e-1	-3.427e+00	0.1024	102.0	19.58%	295.1	16.00%
FoxD3(forkhead)/ZebrafishEmbryo-Foxd3.biotin-ChIP-seq(GSE106676)/Homer	TGTTTAYTTAGC	1e-1	-3.351e+00	0.1102	94.0	18.04%	270.6	14.68%
AGL63(MADS)/col-AGL63-DAP-Seq(GSE60143)/Homer	TTCCAAWWWTGG	1e-1	-3.184e+00	0.1298	134.0	25.72%	405.7	22.00%
MYB13(MYB)/col-MYB13-DAP-Seq(GSE60143)/Homer	HYCACCWACCHH	1e-1	-3.043e+00	0.1490	76.0	14.59%	216.7	11.75%
Phox2b(Homeobox)/CLBGA-PHOX2B-ChIP-Seq(GSE90683)/Homer	TTAATTNAATTA	1e-1	-2.905e+00	0.1705	72.0	13.82%	205.8	11.16%
 Ik-1	NHTTGGGAATRCC	1e-1	-2.889e+00	0.1727	520.0	99.81%	1826.3	99.03%
MYB74(MYB)/colamp-MYB74-DAP-Seq(GSE60143)/Homer	YYYACCTACCWH	1e-1	-2.828e+00	0.1830	94.0	18.04%	278.6	15.11%
HSF6(HSF)/col-HSF6-DAP-Seq(GSE60143)/Homer	TTYTAGAAGCTTCTA	1e-1	-2.733e+00	0.2006	32.0	6.14%	81.9	4.44%
MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer	RTCATGTGAC	1e-1	-2.681e+00	0.2106	67.0	12.86%	192.1	10.42%
THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e-1	-2.532e+00	0.2438	18.0	3.45%	41.2	2.24%
ATY19(MYB)/col-ATY19-DAP-Seq(GSE60143)/Homer	YYCACCWACCAT	1e-1	-2.349e+00	0.2918	84.0	16.12%	253.8	13.76%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e0	-2.177e+00	0.3457	373.0	71.59%	1267.0	68.70%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e0	-2.160e+00	0.3505	24.0	4.61%	62.4	3.38%
RAP26(AP2EREBP)/colamp-RAP26-DAP-Seq(GSE60143)/Homer	HDATGGCGGCGG	1e0	-2.076e+00	0.3800	98.0	18.81%	305.1	16.54%
SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer	AAAGRGGAAGTG	1e0	-2.040e+00	0.3929	22.0	4.22%	57.5	3.12%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e0	-1.959e+00	0.4247	86.0	16.51%	267.2	14.49%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e0	-1.913e+00	0.4433	33.0	6.33%	93.8	5.08%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e0	-1.819e+00	0.4856	27.0	5.18%	75.2	4.08%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e0	-1.799e+00	0.4941	8.0	1.54%	17.1	0.93%
HDG1(Homeobox)/col100-HDG1-DAP-Seq(GSE60143)/Homer	DDYAATTAATGH	1e0	-1.784e+00	0.4999	112.0	21.50%	359.2	19.48%
HSFC1(HSF)/col-HSFC1-DAP-Seq(GSE60143)/Homer	HTTCTAGAADCTTCT	1e0	-1.540e+00	0.6359	25.0	4.80%	72.9	3.96%
bZIP42(bZIP)/colamp-bZIP42-DAP-Seq(GSE60143)/Homer	GCCACGTCAGCA	1e0	-1.513e+00	0.6499	1.0	0.19%	0.5	0.02%
DEL1(E2FDP)/colamp-DEL1-DAP-Seq(GSE60143)/Homer	TTCCCGCCAA	1e0	-1.513e+00	0.6499	1.0	0.19%	0.5	0.03%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e0	-1.341e+00	0.7692	4.0	0.77%	8.8	0.48%
ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer	AGTTTCASTTTC	1e0	-1.325e+00	0.7793	5.0	0.96%	11.3	0.61%
CHR(?)/Hela-CellCycle-Expression/Homer	SRGTTTCAAA	1e0	-1.290e+00	0.8050	71.0	13.63%	231.4	12.55%
SeqBias: CG bias	SSSSSSSSSS	1e0	-1.277e+00	0.8131	343.0	65.83%	1186.2	64.32%
EIL4(EIL)/Tomato-EIL4-ChIP-Seq(GSE116581)/Homer	GATTCAWTGAAT	1e0	-1.260e+00	0.8247	15.0	2.88%	43.0	2.33%
IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer	AGTTTCAKTTTC	1e0	-1.253e+00	0.8278	25.0	4.80%	76.7	4.16%
AT2G01818(PLATZ)/col-AT2G01818-DAP-Seq(GSE60143)/Homer	TCTAGAABSTTC	1e0	-1.221e+00	0.8524	17.0	3.26%	50.4	2.73%
bZIP52(bZIP)/colamp-bZIP52-DAP-Seq(GSE60143)/Homer	NDNHCAGCTGTCANN	1e0	-1.190e+00	0.8769	107.0	20.54%	358.7	19.45%
bZIP69(bZIP)/col-bZIP69-DAP-Seq(GSE60143)/Homer	GACAGCTGKCAW	1e0	-1.149e+00	0.9106	4.0	0.77%	9.3	0.51%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e0	-1.146e+00	0.9113	10.0	1.92%	29.0	1.57%
Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer	NRRTGACGTCAT	1e0	-1.122e+00	0.9309	22.0	4.22%	68.8	3.73%
ANAC103(NAC)/col-ANAC103-DAP-Seq(GSE60143)/Homer	AACTTGNWNWNCAAG	1e0	-1.078e+00	0.9694	45.0	8.64%	147.9	8.02%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e0	-1.043e+00	1.0000	6.0	1.15%	16.5	0.89%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e0	-9.374e-01	1.0000	31.0	5.95%	102.3	5.55%
ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer	SMCAGTCWGAKGGAGGAGGC	1e0	-9.362e-01	1.0000	1.0	0.19%	1.8	0.10%
NAP(NAC)/col-NAP-DAP-Seq(GSE60143)/Homer	ARGTTACGTRTN	1e0	-9.017e-01	1.0000	175.0	33.59%	607.9	32.96%
MYB92(MYB)/colamp-MYB92-DAP-Seq(GSE60143)/Homer	GGTAGGTR	1e0	-8.987e-01	1.0000	95.0	18.23%	326.3	17.69%
PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e0	-8.958e-01	1.0000	44.0	8.45%	148.4	8.05%
Six4(Homeobox)/MCF7-SIX4-ChIP-Seq(Encode)/Homer	TGWAAYCTGABACCB	1e0	-8.888e-01	1.0000	5.0	0.96%	15.0	0.81%
SeqBias: polyA-repeat	AAAAAAAAAA	1e0	-8.473e-01	1.0000	519.0	99.62%	1833.1	99.40%
SCRT1(Zf)/HEK293-SCRT1.eGFP-ChIP-Seq(Encode)/Homer	GCAACAGGTG	1e0	-8.124e-01	1.0000	19.0	3.65%	63.9	3.46%
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer	GGCCYCCTGCTGDGH	1e0	-8.074e-01	1.0000	8.0	1.54%	25.5	1.38%
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e0	-7.776e-01	1.0000	5.0	0.96%	15.5	0.84%
Trl(Zf)/S2-GAGAfactor-ChIP-Seq(GSE40646)/Homer	RGAGAGAG	1e0	-7.775e-01	1.0000	109.0	20.92%	380.9	20.65%
LOB(LOBAS2)/col-LOB-DAP-Seq(GSE60143)/Homer	CGCCGKAWWTTHCGS	1e0	-7.624e-01	1.0000	11.0	2.11%	36.4	1.97%
ERF115(AP2EREBP)/colamp-ERF115-DAP-Seq(GSE60143)/Homer	WTKRCGGCGB	1e0	-7.290e-01	1.0000	105.0	20.15%	368.6	19.99%
ASHR1(ND)/col-ASHR1-DAP-Seq(GSE60143)/Homer	NTGGTGAN	1e0	-7.220e-01	1.0000	80.0	15.36%	280.6	15.22%
MYB27(MYB)/colamp-MYB27-DAP-Seq(GSE60143)/Homer	TACCTAACWT	1e0	-7.041e-01	1.0000	30.0	5.76%	104.1	5.64%
MYB41(MYB)/col-MYB41-DAP-Seq(GSE60143)/Homer	BYTYACCTAA	1e0	-6.921e-01	1.0000	48.0	9.21%	168.6	9.14%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e0	-6.422e-01	1.0000	1.0	0.19%	2.1	0.12%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e0	-6.422e-01	1.0000	1.0	0.19%	2.5	0.13%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e0	-6.422e-01	1.0000	1.0	0.19%	2.4	0.13%
Unknown2/Drosophila-Promoters/Homer	CATCMCTA	1e0	-5.759e-01	1.0000	60.0	11.52%	215.7	11.70%
At5g22890(C2H2)/col-At5g22890-DAP-Seq(GSE60143)/Homer	NSAGGTKWTATCTGD	1e0	-5.596e-01	1.0000	3.0	0.58%	10.5	0.57%
ANAC053(NAC)/colamp-ANAC053-DAP-Seq(GSE60143)/Homer	TDCTTGNNNNNCAAG	1e0	-5.470e-01	1.0000	51.0	9.79%	184.7	10.02%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e0	-5.303e-01	1.0000	79.0	15.16%	285.2	15.46%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e0	-4.763e-01	1.0000	15.0	2.88%	56.8	3.08%
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e0	-4.730e-01	1.0000	2.0	0.38%	7.6	0.41%
GBF3(bZIP)/Arabidopsis-GBF3-ChIP-Seq(GSE80564)/Homer	TGCCACGTSAYC	1e0	-4.675e-01	1.0000	22.0	4.22%	82.0	4.45%
MYB39(MYB)/col-MYB39-DAP-Seq(GSE60143)/Homer	WWAARKTAGGTGRAA	1e0	-4.023e-01	1.0000	26.0	4.99%	99.1	5.38%
Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer	GCTATTTTTGGM	1e0	-3.961e-01	1.0000	103.0	19.77%	379.5	20.58%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e0	-3.906e-01	1.0000	43.0	8.25%	162.6	8.82%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e0	-3.859e-01	1.0000	7.0	1.34%	28.3	1.54%
ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer	GCACAYAGTAGGKCY	1e0	-3.814e-01	1.0000	2.0	0.38%	8.6	0.46%
MS188(MYB)/colamp-MS188-DAP-Seq(GSE60143)/Homer	WARKTAGGTRRA	1e0	-3.809e-01	1.0000	118.0	22.65%	434.2	23.54%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e0	-3.652e-01	1.0000	16.0	3.07%	63.1	3.42%
IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	CTTTCANTATGACTV	1e0	-3.402e-01	1.0000	8.0	1.54%	33.1	1.80%
Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer	GGGGCTYGKCTGGGA	1e0	-3.394e-01	1.0000	1.0	0.19%	4.5	0.24%
bZIP44(bZIP)/colamp-bZIP44-DAP-Seq(GSE60143)/Homer	NDTGCCACGTCAGCH	1e0	-3.394e-01	1.0000	1.0	0.19%	4.7	0.25%
MYB99(MYB)/colamp-MYB99-DAP-Seq(GSE60143)/Homer	GGTAGGTG	1e0	-3.071e-01	1.0000	89.0	17.08%	335.9	18.22%
AARE(HLH)/mES-cMyc-ChIP-Seq/Homer	GATTGCATCA	1e0	-3.036e-01	1.0000	8.0	1.54%	34.1	1.85%
At2g33710(AP2EREBP)/colamp-At2g33710-DAP-Seq(GSE60143)/Homer	WTKGCGGCKR	1e0	-2.854e-01	1.0000	110.0	21.11%	413.5	22.42%
AT3G09735(S1Falike)/col-AT3G09735-DAP-Seq(GSE60143)/Homer	TTCTAGAANMTTCTA	1e0	-2.854e-01	1.0000	35.0	6.72%	139.0	7.53%
ANAC013(NAC)/col-ANAC013-DAP-Seq(GSE60143)/Homer	CTTGNNNNNCAAGNA	1e0	-2.768e-01	1.0000	33.0	6.33%	131.7	7.14%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e0	-2.712e-01	1.0000	9.0	1.73%	39.4	2.14%
IDD2(C2H2)/colamp-IDD2-DAP-Seq(GSE60143)/Homer	HAVAAAAMGACAAAA	1e0	-2.690e-01	1.0000	12.0	2.30%	51.5	2.79%
BPC1(BBRBPC)/colamp-BPC1-DAP-Seq(GSE60143)/Homer	GARGAGAGAGAA	1e0	-2.689e-01	1.0000	26.0	4.99%	105.7	5.73%
VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e0	-2.685e-01	1.0000	7.0	1.34%	31.7	1.72%
Zic2(Zf)/ESC-Zic2-ChIP-Seq(SRP197560)/Homer	CHCAGCRGGRGG	1e0	-2.685e-01	1.0000	7.0	1.34%	31.9	1.73%
DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer	NWTAAYCYAATCAWN	1e0	-2.648e-01	1.0000	6.0	1.15%	27.3	1.48%
Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e0	-2.608e-01	1.0000	16.0	3.07%	67.9	3.68%
TGA5(bZIP)/col-TGA5-DAP-Seq(GSE60143)/Homer	NNGATGACGTCATCN	1e0	-2.585e-01	1.0000	5.0	0.96%	23.3	1.26%
AT2G20110(CPP)/colamp-AT2G20110-DAP-Seq(GSE60143)/Homer	ATTYAAATHY	1e0	-2.553e-01	1.0000	187.0	35.89%	693.9	37.63%
LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e0	-2.540e-01	1.0000	1.0	0.19%	5.4	0.29%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e0	-2.540e-01	1.0000	1.0	0.19%	5.2	0.28%
ZML2(C2C2gata)/col-ZML2-DAP-Seq(GSE60143)/Homer	CATCATCATC	1e0	-2.372e-01	1.0000	7.0	1.34%	32.2	1.75%
MYB51(MYB)/col-MYB51-DAP-Seq(GSE60143)/Homer	GGTAGGTG	1e0	-2.248e-01	1.0000	78.0	14.97%	302.8	16.42%
Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer	ANTTMRCASBNNNGTGYKAAN	1e0	-2.190e-01	1.0000	16.0	3.07%	69.3	3.76%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e0	-2.099e-01	1.0000	52.0	9.98%	207.5	11.25%
AT1G19040(NAC)/col-AT1G19040-DAP-Seq(GSE60143)/Homer	CTTGNDNHNCAAGYW	1e0	-1.807e-01	1.0000	4.0	0.77%	21.7	1.17%
Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e0	-1.463e-01	1.0000	1.0	0.19%	7.1	0.39%
Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer	VCAKCTGGNNNCCAGMTGBN	1e0	-1.463e-01	1.0000	1.0	0.19%	7.8	0.42%
Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer	BSNTGTTTACWYWGN	1e0	-1.461e-01	1.0000	30.0	5.76%	129.4	7.02%
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer	AAYTAGGTCA	1e0	-1.363e-01	1.0000	9.0	1.73%	45.1	2.45%
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer	AAYTAGGTCA	1e0	-1.363e-01	1.0000	9.0	1.73%	45.1	2.45%
FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e0	-1.350e-01	1.0000	3.0	0.58%	18.2	0.99%
NUC(C2H2)/col-NUC-DAP-Seq(GSE60143)/Homer	HAVAAAACGACAAAA	1e0	-1.343e-01	1.0000	6.0	1.15%	32.9	1.78%
E2F(E2F)/Hela-CellCycle-Expression/Homer	TTSGCGCGAAAA	1e0	-1.330e-01	1.0000	2.0	0.38%	13.1	0.71%
MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e0	-1.208e-01	1.0000	13.0	2.50%	63.9	3.46%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e0	-1.121e-01	1.0000	1.0	0.19%	8.8	0.48%
ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer	GTCWGCTGTYYCTCT	1e0	-1.121e-01	1.0000	1.0	0.19%	8.2	0.44%
CAMTA1(CAMTA)/col-CAMTA1-DAP-Seq(GSE60143)/Homer	WWAACGCGTT	1e0	-1.090e-01	1.0000	64.0	12.28%	264.8	14.36%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e0	-1.075e-01	1.0000	148.0	28.41%	575.3	31.20%
HSF3(HSF)/colamp-HSF3-DAP-Seq(GSE60143)/Homer	NTTCTAGAAKCTTCT	1e0	-1.072e-01	1.0000	82.0	15.74%	332.2	18.01%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e0	-9.911e-02	1.0000	10.0	1.92%	52.3	2.84%
bHLH122(bHLH)/col100-bHLH122-DAP-Seq(GSE60143)/Homer	NDDCAASTTGHHNWW	1e0	-9.145e-02	1.0000	46.0	8.83%	198.6	10.77%
JKD(C2H2)/col-JKD-DAP-Seq(GSE60143)/Homer	TTTTGTCGTTTT	1e0	-9.019e-02	1.0000	14.0	2.69%	70.7	3.83%
ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer	GRTGMTRGAGCC	1e0	-8.919e-02	1.0000	19.0	3.65%	91.7	4.97%
Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer	TGACANARRCCAGRC	1e0	-8.798e-02	1.0000	10.0	1.92%	53.5	2.90%
At1g14580(C2H2)/colamp-At1g14580-DAP-Seq(GSE60143)/Homer	CASAAAAMGACAAAA	1e0	-8.763e-02	1.0000	6.0	1.15%	35.3	1.91%
E-box/Drosophila-Promoters/Homer	AACAGCTGTTHN	1e0	-8.313e-02	1.0000	7.0	1.34%	40.5	2.20%
O2(bZIP)/Corn-O2-ChIP-Seq(GSE63991)/Homer	GCTGACGTGGCA	1e0	-7.953e-02	1.0000	4.0	0.77%	26.2	1.42%
MYNN(Zf)/HEK293-MYNN.eGFP-ChIP-Seq(Encode)/Homer	TTCAAAWTAAAAGTC	1e0	-7.844e-02	1.0000	25.0	4.80%	117.8	6.39%
ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer	ARGAGGMCAAAATGW	1e0	-7.836e-02	1.0000	5.0	0.96%	31.3	1.69%
bHLH130(bHLH)/col-bHLH130-DAP-Seq(GSE60143)/Homer	GCAACTTG	1e0	-7.821e-02	1.0000	38.0	7.29%	169.6	9.20%
RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer	AAWCTAGGTCARDNN	1e0	-7.798e-02	1.0000	10.0	1.92%	54.3	2.94%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e0	-6.716e-02	1.0000	4.0	0.77%	27.2	1.48%
ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e0	-6.649e-02	1.0000	1.0	0.19%	10.5	0.57%
dHNF4(NR)/Fly-HNF4-ChIP-Seq(GSE73675)/Homer	GGTCCAAAGTCCAMT	1e0	-6.649e-02	1.0000	1.0	0.19%	10.0	0.54%
ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer	YTKGATAHAGTATTCTWGGTNGGCA	1e0	-6.537e-02	1.0000	6.0	1.15%	37.9	2.06%
SUT1?/SacCer-Promoters/Homer	CCCCGCGC	1e0	-5.786e-02	1.0000	235.0	45.11%	902.5	48.94%
RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer	WAABTAGGTCAV	1e0	-5.718e-02	1.0000	5.0	0.96%	33.9	1.84%
MYB40(MYB)/col-MYB40-DAP-Seq(GSE60143)/Homer	TGGTAGGTRARA	1e0	-5.715e-02	1.0000	29.0	5.57%	137.2	7.44%
Unknown1(NR/Ini-like)/Drosophila-Promoters/Homer	MYGGTCACACTG	1e0	-5.663e-02	1.0000	4.0	0.77%	28.2	1.53%
WIP5(C2H2)/colamp-WIP5-DAP-Seq(GSE60143)/Homer	TDTTCTCMAGGT	1e0	-5.543e-02	1.0000	66.0	12.67%	283.8	15.39%
NFE2L2(bZIP)/HepG2-NFE2L2-ChIP-Seq(Encode)/Homer	AWWWTGCTGAGTCAT	1e0	-5.138e-02	1.0000	1.0	0.19%	11.8	0.64%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e0	-5.138e-02	1.0000	1.0	0.19%	11.8	0.64%
RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer	AGGTCAAGGTCA	1e0	-4.628e-02	1.0000	2.0	0.38%	18.4	1.00%
ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer	GGAACAGCCG	1e0	-4.467e-02	1.0000	13.0	2.50%	72.3	3.92%
Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer	NAACAGCTGG	1e0	-4.380e-02	1.0000	18.0	3.45%	94.1	5.10%
FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer	WWTRTAAACAVG	1e0	-4.021e-02	1.0000	94.0	18.04%	395.0	21.42%
MYB58(MYB)/colamp-MYB58-DAP-Seq(GSE60143)/Homer	YYYACCWACC	1e0	-3.918e-02	1.0000	96.0	18.43%	403.4	21.87%
At2g41835(C2H2)/col-At2g41835-DAP-Seq(GSE60143)/Homer	TTTGAAAA	1e0	-3.662e-02	1.0000	45.0	8.64%	207.8	11.27%
RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e0	-3.612e-02	1.0000	27.0	5.18%	134.4	7.29%
WT1(Zf)/Kidney-WT1-ChIP-Seq(GSE90016)/Homer	MCTCCCMCRCAB	1e0	-3.535e-02	1.0000	7.0	1.34%	46.3	2.51%
IBL1(bHLH)/Seedling-IBL1-ChIP-Seq(GSE51120)/Homer	CACGTGCC	1e0	-3.262e-02	1.0000	75.0	14.40%	326.1	17.68%
AT4G26030(C2H2)/col-AT4G26030-DAP-Seq(GSE60143)/Homer	BYYACCWACY	1e0	-3.058e-02	1.0000	97.0	18.62%	411.4	22.31%
CUC2(NAC)/colamp-CUC2-DAP-Seq(GSE60143)/Homer	TRCKTGTNNNWCAMG	1e0	-2.946e-02	1.0000	32.0	6.14%	157.0	8.51%
MYB67(MYB)/col-MYB67-DAP-Seq(GSE60143)/Homer	YYYACCTAAC	1e0	-2.849e-02	1.0000	93.0	17.85%	397.1	21.53%
FEA4(bZIP)/Corn-FEA4-ChIP-Seq(GSE61954)/Homer	TGACGTCACS	1e0	-2.783e-02	1.0000	61.0	11.71%	274.9	14.91%
RAV1(RAV)/colamp-RAV1-DAP-Seq(GSE60143)/Homer	TWWTTTCTGTTG	1e0	-2.669e-02	1.0000	54.0	10.36%	247.3	13.41%
M1BP(Zf)/S2R+-M1BP-ChIP-Seq(GSE49842)/Homer	CAGTGTGACCGT	1e0	-2.607e-02	1.0000	6.0	1.15%	43.9	2.38%
SFP1/SacCer-Promoters/Homer	DDAAAAATTTTY	1e0	-2.607e-02	1.0000	6.0	1.15%	43.9	2.38%
AT3G10580(MYBrelated)/colamp-AT3G10580-DAP-Seq(GSE60143)/Homer	TACCTAACWNHW	1e0	-2.493e-02	1.0000	47.0	9.02%	220.0	11.93%
TOD6?/SacCer-Promoters/Homer	GCGATGAGMT	1e0	-2.354e-02	1.0000	4.0	0.77%	33.7	1.83%
TCP3(TCP)/colamp-TCP3-DAP-Seq(GSE60143)/Homer	WGTGGTCCCAAHWWW	1e0	-2.224e-02	1.0000	6.0	1.15%	44.8	2.43%
TGA10(bZIP)/colamp-TGA10-DAP-Seq(GSE60143)/Homer	ATGACGTC	1e0	-2.130e-02	1.0000	55.0	10.56%	254.4	13.79%
Duxbl(Homeobox)/NIH3T3-Duxbl.HA-ChIP-Seq(GSE119782)/Homer	TAAYCYAATCAA	1e0	-2.054e-02	1.0000	3.0	0.58%	28.2	1.53%
NAM(NAC)/col-NAM-DAP-Seq(GSE60143)/Homer	RGTTRCGTRW	1e0	-2.025e-02	1.0000	150.0	28.79%	616.0	33.40%
BAM8(BES1)/col-BAM8-DAP-Seq(GSE60143)/Homer	NNWSACACGTGTSWN	1e0	-1.966e-02	1.0000	4.0	0.77%	34.9	1.89%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e0	-1.898e-02	1.0000	144.0	27.64%	595.9	32.31%
DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer	TWGHWACAWTGTWDC	1e0	-1.810e-02	1.0000	20.0	3.84%	112.0	6.07%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e0	-1.764e-02	1.0000	22.0	4.22%	120.8	6.55%
AT3G58630(Trihelix)/col-AT3G58630-DAP-Seq(GSE60143)/Homer	TCTCCGGCGA	1e0	-1.688e-02	1.0000	3.0	0.58%	29.0	1.57%
TCP20(TCP)/col-TCP20-DAP-Seq(GSE60143)/Homer	GGDCCCAC	1e0	-1.688e-02	1.0000	3.0	0.58%	29.9	1.62%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e0	-1.685e-02	1.0000	37.0	7.10%	184.1	9.98%
Ascl2(bHLH)/ESC-Ascl2-ChIP-Seq(GSE97712)/Homer	SSRGCAGCTGCH	1e0	-1.642e-02	1.0000	18.0	3.45%	103.8	5.63%
AtIDD11(C2H2)/colamp-AtIDD11-DAP-Seq(GSE60143)/Homer	TTTGTCGTTT	1e0	-1.591e-02	1.0000	25.0	4.80%	134.1	7.27%
HSFA6B(HSF)/colamp-HSFA6B-DAP-Seq(GSE60143)/Homer	NTTCTAGAANHTTCT	1e0	-1.463e-02	1.0000	40.0	7.68%	198.9	10.79%
PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e0	-1.442e-02	1.0000	1.0	0.19%	16.8	0.91%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e0	-1.386e-02	1.0000	3.0	0.58%	30.5	1.65%
HSFB3(HSF)/colamp-HSFB3-DAP-Seq(GSE60143)/Homer	TTCTAGAAGMTTHTW	1e0	-1.386e-02	1.0000	3.0	0.58%	30.2	1.64%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer	CTGTTTAC	1e0	-1.289e-02	1.0000	111.0	21.31%	478.7	25.95%
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e0	-1.239e-02	1.0000	8.0	1.54%	58.3	3.16%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e0	-1.134e-02	1.0000	4.0	0.77%	38.0	2.06%
BZR1(BZR)/col-BZR1-DAP-Seq(GSE60143)/Homer	NNCRCACGTGCG	1e0	-1.120e-02	1.0000	1.0	0.19%	17.6	0.95%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e0	-1.074e-02	1.0000	9.0	1.73%	64.0	3.47%
Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer	CCTGCTGAGH	1e0	-1.056e-02	1.0000	15.0	2.88%	93.7	5.08%
MYB121(MYB)/col-MYB121-DAP-Seq(GSE60143)/Homer	YNTACCTAACWW	1e0	-1.051e-02	1.0000	42.0	8.06%	210.3	11.40%
MYB49(MYB)/col-MYB49-DAP-Seq(GSE60143)/Homer	ARKTAGGTRR	1e0	-1.018e-02	1.0000	104.0	19.96%	455.4	24.69%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e0	-9.711e-03	1.0000	361.0	69.29%	1371.3	74.36%
DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer	YDGHTACAWTGTADC	1e0	-9.681e-03	1.0000	14.0	2.69%	89.1	4.83%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e0	-9.296e-03	1.0000	3.0	0.58%	32.4	1.76%
WRKY8(WRKY)/colamp-WRKY8-DAP-Seq(GSE60143)/Homer	CGTTGACTTT	1e0	-8.992e-03	1.0000	5.0	0.96%	44.7	2.42%
At5g04390(C2H2)/col200-At5g04390-DAP-Seq(GSE60143)/Homer	AGTGANDN	1e0	-8.821e-03	1.0000	335.0	64.30%	1285.9	69.73%
ANL2(HB)/col-ANL2-DAP-Seq(GSE60143)/Homer	CATTAATTGC	1e0	-8.753e-03	1.0000	74.0	14.20%	341.6	18.52%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e0	-8.025e-03	1.0000	42.0	8.06%	213.7	11.59%
FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer	AGGTCANTGACCTB	1e0	-7.811e-03	1.0000	8.0	1.54%	61.7	3.34%
PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e0	-7.713e-03	1.0000	23.0	4.41%	132.8	7.20%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e0	-6.763e-03	1.0000	1.0	0.19%	19.7	1.07%
KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer	NRGCCCCRCCCHBNN	1e0	-6.539e-03	1.0000	2.0	0.38%	27.4	1.48%
JGL(C2H2)/col-JGL-DAP-Seq(GSE60143)/Homer	ACYTTCAGTT	1e0	-5.871e-03	1.0000	137.0	26.30%	588.7	31.92%
Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e0	-5.261e-03	1.0000	5.0	0.96%	47.7	2.59%
Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer	RGKGGGCGGAGC	1e0	-5.261e-03	1.0000	5.0	0.96%	47.7	2.59%
At1g72010(TCP)/colamp-At1g72010-DAP-Seq(GSE60143)/Homer	GGDCCCAC	1e0	-5.261e-03	1.0000	5.0	0.96%	47.8	2.59%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e0	-5.184e-03	1.0000	11.0	2.11%	79.1	4.29%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e0	-5.151e-03	1.0000	10.0	1.92%	74.3	4.03%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e0	-5.151e-03	1.0000	10.0	1.92%	74.6	4.05%
BIM3(bHLH)/col-BIM3-DAP-Seq(GSE60143)/Homer	TWVTCACGTGAB	1e0	-5.060e-03	1.0000	3.0	0.58%	35.9	1.94%
REB1/SacCer-Promoters/Homer	KCCGGGTAAYRR	1e0	-5.049e-03	1.0000	9.0	1.73%	69.1	3.75%
MYB107(MYB)/col-MYB107-DAP-Seq(GSE60143)/Homer	RGTWGGTRRR	1e0	-4.412e-03	1.0000	134.0	25.72%	581.3	31.52%
MYB57(MYB)/col-MYB57-DAP-Seq(GSE60143)/Homer	TTACCTAACT	1e0	-4.403e-03	1.0000	45.0	8.64%	232.3	12.60%
At4g18890(BZR)/col-At4g18890-DAP-Seq(GSE60143)/Homer	NDBRCACGTGYR	1e0	-4.189e-03	1.0000	2.0	0.38%	29.0	1.57%
HINFP(Zf)/K562-HINFP.eGFP-ChIP-Seq(Encode)/Homer	TWVGGTCCGC	1e0	-4.142e-03	1.0000	8.0	1.54%	65.2	3.53%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e0	-4.086e-03	1.0000	1.0	0.19%	21.7	1.18%
HSF21(HSF)/col-HSF21-DAP-Seq(GSE60143)/Homer	CTTCTAGAAGMTTYW	1e0	-3.354e-03	1.0000	3.0	0.58%	37.5	2.03%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e0	-3.271e-03	1.0000	10.0	1.92%	77.3	4.19%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e0	-3.041e-03	1.0000	5.0	0.96%	50.3	2.73%
OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e0	-2.540e-03	1.0000	8.0	1.54%	68.4	3.71%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e0	-2.464e-03	1.0000	4.0	0.77%	45.6	2.47%
Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer	SCTGTCAVTCAV	1e0	-2.464e-03	1.0000	4.0	0.77%	45.7	2.48%
MYB70(MYB)/col-MYB70-DAP-Seq(GSE60143)/Homer	WTAACNGTTA	1e0	-2.060e-03	1.0000	211.0	40.50%	875.7	47.48%
Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer	YTAATTRAWWCCAGATGT	1e0	-2.024e-03	1.0000	4.0	0.77%	46.5	2.52%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e0	-1.956e-03	1.0000	9.0	1.73%	75.0	4.07%
RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e0	-1.919e-03	1.0000	1.0	0.19%	24.1	1.30%
Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer	NNVVCAGCTGBN	1e0	-1.880e-03	1.0000	23.0	4.41%	144.2	7.82%
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e0	-1.702e-03	1.0000	2.0	0.38%	33.7	1.83%
PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer	NGTGTTCAVTSAAGCGKAAA	1e0	-1.491e-03	1.0000	1.0	0.19%	25.8	1.40%
BIM1(bHLH)/colamp-BIM1-DAP-Seq(GSE60143)/Homer	NNNNNNVTCACGTGM	1e0	-1.491e-03	1.0000	1.0	0.19%	26.0	1.41%
ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	-1.356e-03	1.0000	2.0	0.38%	34.2	1.86%
At1g69690(TCP)/colamp-At1g69690-DAP-Seq(GSE60143)/Homer	NHGTGGGGCCCACHW	1e0	-1.159e-03	1.0000	1.0	0.19%	26.6	1.44%
Unknown4/Drosophila-Promoters/Homer	AAAAATACCRMA	1e0	-1.097e-03	1.0000	8.0	1.54%	73.5	3.98%
LBD2(LOBAS2)/colamp-LBD2-DAP-Seq(GSE60143)/Homer	TCCGAWTTTTTCGGN	1e0	-1.021e-03	1.0000	30.0	5.76%	181.1	9.82%
dof42(C2C2dof)/col-dof42-DAP-Seq(GSE60143)/Homer	AAAAAGGC	1e0	-1.019e-03	1.0000	61.0	11.71%	314.7	17.07%
ANAC016(NAC)/col-ANAC016-DAP-Seq(GSE60143)/Homer	WNCTTGNNNNNCAMG	1e0	-9.890e-04	1.0000	53.0	10.17%	281.2	15.25%
NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e0	-9.520e-04	1.0000	3.0	0.58%	43.3	2.35%
PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e0	-9.100e-04	1.0000	14.0	2.69%	107.0	5.80%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e0	-9.000e-04	1.0000	1.0	0.19%	27.8	1.51%
GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e0	-9.000e-04	1.0000	1.0	0.19%	27.6	1.50%
HDG7(HB)/col-HDG7-DAP-Seq(GSE60143)/Homer	WGCATTTAATGC	1e0	-8.340e-04	1.0000	11.0	2.11%	91.7	4.97%
ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer	AACATCTGGA	1e0	-8.110e-04	1.0000	5.0	0.96%	57.5	3.12%
Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer	GATTTGCATA	1e0	-7.880e-04	1.0000	17.0	3.26%	122.4	6.64%
AT4G18450(AP2EREBP)/col-AT4G18450-DAP-Seq(GSE60143)/Homer	ATGGCGGCKG	1e0	-7.690e-04	1.0000	3.0	0.58%	44.1	2.39%
PIF7(bHLH)/col-PIF7-DAP-Seq(GSE60143)/Homer	CCACGTGGNH	1e0	-7.000e-04	1.0000	1.0	0.19%	28.4	1.54%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer	TBGCACGCAA	1e0	-6.820e-04	1.0000	50.0	9.60%	273.0	14.80%
Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer	DGTAAACA	1e0	-6.390e-04	1.0000	62.0	11.90%	323.1	17.52%
Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer	SNGCACCTGCHS	1e0	-5.730e-04	1.0000	6.0	1.15%	65.2	3.53%
E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e0	-5.700e-04	1.0000	20.0	3.84%	139.5	7.57%
MYB93(MYB)/colamp-MYB93-DAP-Seq(GSE60143)/Homer	GGTAGGTGRD	1e0	-5.580e-04	1.0000	88.0	16.89%	430.3	23.33%
bHLH34(bHLH)/colamp-bHLH34-DAP-Seq(GSE60143)/Homer	HGWGRHWGACACGTG	1e0	-4.530e-04	1.0000	5.0	0.96%	60.5	3.28%
bHLH74(bHLH)/col-bHLH74-DAP-Seq(GSE60143)/Homer	DRATCACGTGAB	1e0	-4.310e-04	1.0000	2.0	0.38%	39.5	2.14%
MYB3(MYB)/Arabidopsis-MYB3-ChIP-Seq(GSE80564)/Homer	GKTAGGTRGG	1e0	-4.270e-04	1.0000	107.0	20.54%	508.2	27.56%
PPARa(NR),DR1/Liver-Ppara-ChIP-Seq(GSE47954)/Homer	VNAGGKCAAAGGTCA	1e0	-3.690e-04	1.0000	31.0	5.95%	194.5	10.54%
ANAC047(NAC)/colamp-ANAC047-DAP-Seq(GSE60143)/Homer	WACACGTAACTT	1e0	-3.540e-04	1.0000	92.0	17.66%	451.4	24.47%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e0	-3.420e-04	1.0000	2.0	0.38%	40.5	2.20%
bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e0	-3.060e-04	1.0000	5.0	0.96%	62.3	3.38%
At1g78700(BZR)/col-At1g78700-DAP-Seq(GSE60143)/Homer	NNNNCACGTGNNNNN	1e0	-3.060e-04	1.0000	5.0	0.96%	62.1	3.37%
MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e0	-2.870e-04	1.0000	12.0	2.30%	103.5	5.61%
AT2G31460(REMB3)/col-AT2G31460-DAP-Seq(GSE60143)/Homer	WNWARWDGAAATGAT	1e0	-2.870e-04	1.0000	12.0	2.30%	103.6	5.62%
FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer	SCHTGTTTACAT	1e0	-2.870e-04	1.0000	41.0	7.87%	241.1	13.07%
ANAC087(NAC)/col-ANAC087-DAP-Seq(GSE60143)/Homer	WVCKTGHNNNWCAMG	1e0	-2.470e-04	1.0000	17.0	3.26%	131.0	7.10%
ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer	GTGACCTTGRVN	1e0	-2.340e-04	1.0000	23.0	4.41%	160.1	8.68%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e0	-2.150e-04	1.0000	18.0	3.45%	136.0	7.38%
At4g36780(BZR)/col-At4g36780-DAP-Seq(GSE60143)/Homer	NNNNNNCACGTGNNN	1e0	-2.060e-04	1.0000	5.0	0.96%	64.1	3.48%
bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e0	-2.040e-04	1.0000	15.0	2.88%	121.5	6.59%
bHLH157(bHLH)/col-bHLH157-DAP-Seq(GSE60143)/Homer	KACACGTCTCTY	1e0	-2.040e-04	1.0000	15.0	2.88%	121.5	6.59%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e0	-1.980e-04	1.0000	1.0	0.19%	33.3	1.81%
HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer	VCAGCTGBNN	1e0	-1.880e-04	1.0000	32.0	6.14%	204.3	11.08%
MYB55(MYB)/colamp-MYB55-DAP-Seq(GSE60143)/Homer	YACCWAMC	1e0	-1.850e-04	1.0000	96.0	18.43%	474.2	25.71%
WRKY21(WRKY)/colamp-WRKY21-DAP-Seq(GSE60143)/Homer	DCGTTGACTTTT	1e0	-1.700e-04	1.0000	2.0	0.38%	43.2	2.34%
ZNF7(Zf)/HepG2-ZNF7.Flag-ChIP-Seq(Encode)/Homer	CTGCCWVCTTTTRTA	1e0	-1.690e-04	1.0000	25.0	4.80%	172.9	9.37%
KLF1(Zf)/HUDEP2-KLF1-CutnRun(GSE136251)/Homer	VDGGGYGGGGCY	1e0	-1.690e-04	1.0000	3.0	0.58%	51.2	2.78%
WRKY11(WRKY)/col-WRKY11-DAP-Seq(GSE60143)/Homer	SCGTTGACTTTN	1e0	-1.690e-04	1.0000	3.0	0.58%	51.1	2.77%
DREB26(AP2EREBP)/col-DREB26-DAP-Seq(GSE60143)/Homer	CCACCGACAH	1e0	-1.540e-04	1.0000	1.0	0.19%	34.5	1.87%
Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer	VGCTGWCAVB	1e0	-1.410e-04	1.0000	68.0	13.05%	363.5	19.71%
At5g08330(TCP)/col-At5g08330-DAP-Seq(GSE60143)/Homer	GGRCCCAC	1e0	-1.380e-04	1.0000	5.0	0.96%	66.5	3.61%
At5g65130(AP2EREBP)/colamp-At5g65130-DAP-Seq(GSE60143)/Homer	CCRCCGACAWTN	1e0	-1.350e-04	1.0000	2.0	0.38%	45.0	2.44%
TATA-box/Drosophila-Promoters/Homer	CTATAAAAGCSV	1e0	-1.250e-04	1.0000	6.0	1.15%	73.9	4.01%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e0	-1.240e-04	1.0000	30.0	5.76%	198.8	10.78%
Dorsal(RHD)/Embryo-dl-ChIP-Seq(GSE65441)/Homer	GGGAAAAMCCCG	1e0	-1.190e-04	1.0000	1.0	0.19%	35.2	1.91%
Snail1(Zf)/LS174T-SNAIL1.HA-ChIP-Seq(GSE127183)/Homer	TRCACCTGCY	1e0	-1.160e-04	1.0000	11.0	2.11%	103.2	5.60%
E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer	BTKGGCGGGAAA	1e0	-1.080e-04	1.0000	9.0	1.73%	92.6	5.02%
At1g75490(AP2EREBP)/colamp-At1g75490-DAP-Seq(GSE60143)/Homer	CACCGMCT	1e0	-9.700e-05	1.0000	135.0	25.91%	634.0	34.38%
PRDM15(Zf)/ESC-Prdm15-ChIP-Seq(GSE73694)/Homer	YCCDNTCCAGGTTTT	1e0	-9.500e-05	1.0000	26.0	4.99%	181.7	9.85%
Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e0	-9.300e-05	1.0000	1.0	0.19%	36.6	1.99%
KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer	MKGGGYGTGGCC	1e0	-7.600e-05	1.0000	4.0	0.77%	62.2	3.37%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer	GYCATCMATCAT	1e0	-7.200e-05	1.0000	1.0	0.19%	37.4	2.03%
Pho2(bHLH)/Yeast-Pho2-ChIP-Seq(GSE29506)/Homer	CCCACGTGCT	1e0	-6.200e-05	1.0000	4.0	0.77%	63.5	3.44%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e0	-6.100e-05	1.0000	27.0	5.18%	190.0	10.30%
Cbf1(bHLH)/Yeast-Cbf1-ChIP-Seq(GSE29506)/Homer	TCACGTGAYH	1e0	-5.600e-05	1.0000	3.0	0.58%	56.4	3.06%
Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e0	-5.600e-05	1.0000	1.0	0.19%	38.1	2.06%
ERF10(AP2EREBP)/col-ERF10-DAP-Seq(GSE60143)/Homer	RTGGCGGCGG	1e0	-5.000e-05	1.0000	7.0	1.34%	84.9	4.60%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	-3.600e-05	1.0000	9.0	1.73%	98.6	5.35%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e0	-3.400e-05	1.0000	7.0	1.34%	86.9	4.71%
Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e0	-2.800e-05	1.0000	7.0	1.34%	87.4	4.74%
GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e0	-2.600e-05	1.0000	1.0	0.19%	41.2	2.23%
ANAC079(NAC)/colamp-ANAC079-DAP-Seq(GSE60143)/Homer	TACACGCAACCT	1e0	-2.400e-05	1.0000	40.0	7.68%	257.2	13.95%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-2.100e-05	1.0000	4.0	0.77%	68.3	3.70%
At4g32800(AP2EREBP)/colamp-At4g32800-DAP-Seq(GSE60143)/Homer	DYCACCGACAHWWWH	1e0	-2.000e-05	1.0000	2.0	0.38%	52.7	2.86%
KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer	RGKGGGCGKGGC	1e0	-2.000e-05	1.0000	8.0	1.54%	95.9	5.20%
c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer	VCCACGTG	1e0	-1.400e-05	1.0000	6.0	1.15%	84.2	4.57%
TCP16(TCP)/colamp-TCP16-DAP-Seq(GSE60143)/Homer	GTGGDCCYNNNNNNN	1e0	-1.200e-05	1.0000	3.0	0.58%	63.4	3.44%
MYB98(MYB)/col-MYB98-DAP-Seq(GSE60143)/Homer	NWDCCGTTAC	1e0	-1.100e-05	1.0000	24.0	4.61%	186.8	10.13%
Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer	WWATRTAAACAN	1e0	-1.100e-05	1.0000	88.0	16.89%	470.2	25.50%
ARF16(ARF)/col-ARF16-DAP-Seq(GSE60143)/Homer	ATTTTACGAT	1e0	-1.100e-05	1.0000	30.0	5.76%	216.4	11.73%
TRP2(MYBrelated)/colamp-TRP2-DAP-Seq(GSE60143)/Homer	TAAACCCT	1e0	-1.000e-05	1.0000	2.0	0.38%	55.9	3.03%
WRKY43(WRKY)/colamp-WRKY43-DAP-Seq(GSE60143)/Homer	NCGTTGACTTTT	1e0	-9.000e-06	1.0000	15.0	2.88%	140.8	7.63%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e0	-8.000e-06	1.0000	10.0	1.92%	112.4	6.10%
MYB4(MYB)/col200-MYB4-DAP-Seq(GSE60143)/Homer	WAGKTAGGTARR	1e0	-8.000e-06	1.0000	45.0	8.64%	288.4	15.64%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	GCTGTGGTTW	1e0	-8.000e-06	1.0000	13.0	2.50%	130.1	7.06%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e0	-7.000e-06	1.0000	4.0	0.77%	73.5	3.99%
HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e0	-6.000e-06	1.0000	5.0	0.96%	81.8	4.43%
CRF4(AP2EREBP)/colamp-CRF4-DAP-Seq(GSE60143)/Homer	CGCCGCCA	1e0	-6.000e-06	1.0000	1.0	0.19%	47.8	2.59%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e0	-5.000e-06	1.0000	55.0	10.56%	336.7	18.26%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e0	-5.000e-06	1.0000	12.0	2.30%	127.1	6.89%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e0	-4.000e-06	1.0000	16.0	3.07%	150.9	8.18%
Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e0	-4.000e-06	1.0000	14.0	2.69%	139.9	7.59%
Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer	NATGASTCABNN	1e0	-4.000e-06	1.0000	2.0	0.38%	59.4	3.22%
Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer	GGCMATGAAA	1e0	-3.000e-06	1.0000	80.0	15.36%	447.5	24.27%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e0	-3.000e-06	1.0000	12.0	2.30%	129.7	7.03%
Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e0	-3.000e-06	1.0000	7.0	1.34%	98.9	5.36%
Zfp57(Zf)/H1-ZFP57.HA-ChIP-Seq(GSE115387)/Homer	NANTGCSGCA	1e0	-3.000e-06	1.0000	10.0	1.92%	119.0	6.45%
Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer	AGGTGTGAAA	1e0	-2.000e-06	1.0000	45.0	8.64%	297.1	16.11%
ZEB2(Zf)/SNU398-ZEB2-ChIP-Seq(GSE103048)/Homer	GNMCAGGTGTGC	1e0	-2.000e-06	1.0000	15.0	2.88%	148.2	8.03%
Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer	WATGCAAATGAG	1e0	-2.000e-06	1.0000	16.0	3.07%	154.2	8.36%
AT1G76870(Trihelix)/col-AT1G76870-DAP-Seq(GSE60143)/Homer	AAAACCRGWW	1e0	-2.000e-06	1.0000	18.0	3.45%	165.4	8.97%
USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e0	-2.000e-06	1.0000	3.0	0.58%	71.7	3.89%
PCF/Arabidopsis-Promoters/Homer	NNWWWTGGGCYTDDN	1e0	-2.000e-06	1.0000	6.0	1.15%	94.7	5.14%
Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer	HDGYAATGAAAN	1e0	-2.000e-06	1.0000	157.0	30.13%	759.8	41.20%
bHLHE41(bHLH)/proB-Bhlhe41-ChIP-Seq(GSE93764)/Homer	KCACGTGMCN	1e0	-2.000e-06	1.0000	38.0	7.29%	268.9	14.58%
GT3a(Trihelix)/col-GT3a-DAP-Seq(GSE60143)/Homer	WNACACGTGTYWWAW	1e0	-1.000e-06	1.0000	2.0	0.38%	63.7	3.45%
HAP3(CCAATHAP3)/col-HAP3-DAP-Seq(GSE60143)/Homer	TGATGGAW	1e0	-1.000e-06	1.0000	6.0	1.15%	95.4	5.17%
MYB94(MYB)/col-MYB94-DAP-Seq(GSE60143)/Homer	WGGTRGTTGGKA	1e0	-1.000e-06	1.0000	7.0	1.34%	102.6	5.56%
ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer	NGNTCTAGAACCNGV	1e0	-1.000e-06	1.0000	5.0	0.96%	88.5	4.80%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e0	-1.000e-06	1.0000	44.0	8.45%	297.8	16.15%
AT3G57600(AP2EREBP)/col-AT3G57600-DAP-Seq(GSE60143)/Homer	GGCGGTGG	1e0	-1.000e-06	1.0000	3.0	0.58%	73.6	3.99%
STOP1(C2H2)/colamp-STOP1-DAP-Seq(GSE60143)/Homer	DTATCTGGKGRAGGT	1e0	-1.000e-06	1.0000	5.0	0.96%	90.8	4.92%
PRDM10(Zf)/HEK293-PRDM10.eGFP-ChIP-Seq(Encode)/Homer	TGGTACATTCCA	1e0	-1.000e-06	1.0000	7.0	1.34%	105.5	5.72%
GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e0	-1.000e-06	1.0000	1.0	0.19%	55.8	3.02%
AT1G44830(AP2EREBP)/col-AT1G44830-DAP-Seq(GSE60143)/Homer	NCCACCGACA	1e0	-1.000e-06	1.0000	1.0	0.19%	55.1	2.99%
bZIP50(bZIP)/colamp-bZIP50-DAP-Seq(GSE60143)/Homer	GATGACGTCA	1e0	-1.000e-06	1.0000	76.0	14.59%	443.3	24.04%
At1g25550(G2like)/colamp-At1g25550-DAP-Seq(GSE60143)/Homer	NAGATTCY	1e0	-1.000e-06	1.0000	82.0	15.74%	469.1	25.44%
HY5(bZIP)/colamp-HY5-DAP-Seq(GSE60143)/Homer	RRTSACGTSD	1e0	-1.000e-06	1.0000	64.0	12.28%	392.3	21.27%
Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e0	-0.000e+00	1.0000	8.0	1.54%	114.3	6.20%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e0	-0.000e+00	1.0000	47.0	9.02%	320.3	17.37%
TGA4(bZIP)/colamp-TGA4-DAP-Seq(GSE60143)/Homer	RTGACGTCAKCW	1e0	-0.000e+00	1.0000	6.0	1.15%	102.3	5.55%
AT1G24250(Orphan)/col-AT1G24250-DAP-Seq(GSE60143)/Homer	KTDGTTGGTDGTTGG	1e0	-0.000e+00	1.0000	5.0	0.96%	95.4	5.17%
SPL13(SBP)/col-SPL13-DAP-Seq(GSE60143)/Homer	WAHTGTACGGAH	1e0	-0.000e+00	1.0000	3.0	0.58%	79.5	4.31%
MYB83(MYB)/colamp-MYB83-DAP-Seq(GSE60143)/Homer	CACCAACCWH	1e0	-0.000e+00	1.0000	125.0	23.99%	651.5	35.33%
c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e0	-0.000e+00	1.0000	1.0	0.19%	59.5	3.22%
MYB116(MYB)/colamp-MYB116-DAP-Seq(GSE60143)/Homer	AGTTAGGCAN	1e0	-0.000e+00	1.0000	38.0	7.29%	280.6	15.22%
CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e0	-0.000e+00	1.0000	5.0	0.96%	96.6	5.24%
Zelda(Zf)/Embryo-zld-ChIP-Seq(GSE65441)/Homer	KBCTACCTGW	1e0	-0.000e+00	1.0000	8.0	1.54%	118.7	6.43%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e0	-0.000e+00	1.0000	1.0	0.19%	61.2	3.32%
n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e0	-0.000e+00	1.0000	5.0	0.96%	98.8	5.36%
AT2G20400(G2like)/colamp-AT2G20400-DAP-Seq(GSE60143)/Homer	DNVGAATATTCBNHN	1e0	-0.000e+00	1.0000	5.0	0.96%	98.3	5.33%
HLH-1(bHLH)/cElegans-Embryo-HLH1-ChIP-Seq(modEncode)/Homer	RACAGCTGTTBH	1e0	-0.000e+00	1.0000	17.0	3.26%	175.7	9.53%
Sp2(Zf)/HEK293-Sp2.eGFP-ChIP-Seq(Encode)/Homer	YGGCCCCGCCCC	1e0	-0.000e+00	1.0000	7.0	1.34%	113.2	6.14%
Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	TATGCWAATBAV	1e0	-0.000e+00	1.0000	11.0	2.11%	140.6	7.63%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e0	-0.000e+00	1.0000	4.0	0.77%	91.2	4.94%
EBF2(EBF)/BrownAdipose-EBF2-ChIP-Seq(GSE97114)/Homer	NABTCCCWDGGGAVH	1e0	-0.000e+00	1.0000	4.0	0.77%	92.9	5.04%
FUS3(ABI3VP1)/col-FUS3-DAP-Seq(GSE60143)/Homer	DNNWTNTGCATGKNN	1e0	-0.000e+00	1.0000	31.0	5.95%	253.6	13.75%
Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer	AAACMATTAN	1e0	-0.000e+00	1.0000	46.0	8.83%	326.9	17.72%
TSO1(CPP)/col-TSO1-DAP-Seq(GSE60143)/Homer	RAATTTRAAW	1e0	-0.000e+00	1.0000	2.0	0.38%	75.1	4.07%
PSE(SNAPc)/K562-mStart-Seq/Homer	WAVTCACCMTAASYDAAAAG	1e0	-0.000e+00	1.0000	27.0	5.18%	233.7	12.67%
E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e0	-0.000e+00	1.0000	20.0	3.84%	196.8	10.67%
Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer	AAGGTGTKAA	1e0	-0.000e+00	1.0000	89.0	17.08%	518.1	28.09%
LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer	AAGACCCYYN	1e0	-0.000e+00	1.0000	21.0	4.03%	204.7	11.10%
At3g04030(G2like)/col-At3g04030-DAP-Seq(GSE60143)/Homer	DRGAATCT	1e0	-0.000e+00	1.0000	75.0	14.40%	461.4	25.02%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e0	-0.000e+00	1.0000	2.0	0.38%	78.3	4.24%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e0	-0.000e+00	1.0000	3.0	0.58%	88.7	4.81%
DEL2(E2FDP)/col-DEL2-DAP-Seq(GSE60143)/Homer	WTTTCSCGCC	1e0	-0.000e+00	1.0000	8.0	1.54%	127.1	6.89%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer	CYAAAAATAG	1e0	-0.000e+00	1.0000	18.0	3.45%	190.1	10.31%
GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer	CTCCCTGGGAGGCCN	1e0	-0.000e+00	1.0000	4.0	0.77%	98.3	5.33%
HAT1(Homeobox)/col-HAT1-DAP-Seq(GSE60143)/Homer	SCAATCATTGNN	1e0	-0.000e+00	1.0000	5.0	0.96%	108.5	5.89%
WRKY45(WRKY)/col-WRKY45-DAP-Seq(GSE60143)/Homer	HNNNKTTGACTWWNH	1e0	-0.000e+00	1.0000	15.0	2.88%	177.0	9.60%
ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer	RGGGCACTAACY	1e0	-0.000e+00	1.0000	15.0	2.88%	178.4	9.67%
MYB61(MYB)/colamp-MYB61-DAP-Seq(GSE60143)/Homer	HCYACCTACC	1e0	-0.000e+00	1.0000	101.0	19.39%	582.7	31.60%
WUS1(Homeobox)/colamp-WUS1-DAP-Seq(GSE60143)/Homer	CAWTCATTCA	1e0	-0.000e+00	1.0000	13.0	2.50%	166.5	9.03%
WRKY26(WRKY)/colamp-WRKY26-DAP-Seq(GSE60143)/Homer	CGTTGACTWDKN	1e0	-0.000e+00	1.0000	18.0	3.45%	196.1	10.63%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e0	-0.000e+00	1.0000	2.0	0.38%	84.5	4.58%
At2g44940(AP2EREBP)/colamp-At2g44940-DAP-Seq(GSE60143)/Homer	NYACCGACAHNNNNN	1e0	-0.000e+00	1.0000	2.0	0.38%	85.6	4.64%
At4g28140(AP2EREBP)/colamp-At4g28140-DAP-Seq(GSE60143)/Homer	DCCACCGACCAW	1e0	-0.000e+00	1.0000	1.0	0.19%	74.1	4.02%
NLP7(RWPRK)/col-NLP7-DAP-Seq(GSE60143)/Homer	TGRCCYTTCR	1e0	-0.000e+00	1.0000	70.0	13.44%	454.5	24.64%
TINY(AP2EREBP)/col-TINY-DAP-Seq(GSE60143)/Homer	NNCACCGACA	1e0	-0.000e+00	1.0000	2.0	0.38%	86.4	4.69%
BOS1(MYB)/col-BOS1-DAP-Seq(GSE60143)/Homer	NNRCCTAACT	1e0	-0.000e+00	1.0000	47.0	9.02%	349.6	18.95%
Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer	YCTTATCTBN	1e0	-0.000e+00	1.0000	65.0	12.48%	432.1	23.43%
TGA1(bZIP)/colamp-TGA1-DAP-Seq(GSE60143)/Homer	TGACGTCAKC	1e0	-0.000e+00	1.0000	6.0	1.15%	122.2	6.63%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e0	-0.000e+00	1.0000	8.0	1.54%	137.3	7.44%
FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer	NVWTGTTTAC	1e0	-0.000e+00	1.0000	69.0	13.24%	453.0	24.56%
ATHB18(Homeobox)/colamp-ATHB18-DAP-Seq(GSE60143)/Homer	YCAATSATTG	1e0	-0.000e+00	1.0000	5.0	0.96%	116.5	6.32%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e0	-0.000e+00	1.0000	33.0	6.33%	286.3	15.52%
MYB17(MYB)/colamp-MYB17-DAP-Seq(GSE60143)/Homer	GGTAGGTGRG	1e0	-0.000e+00	1.0000	11.0	2.11%	163.7	8.88%
ERF13(AP2EREBP)/colamp-ERF13-DAP-Seq(GSE60143)/Homer	TYAGCCGCCATT	1e0	-0.000e+00	1.0000	12.0	2.30%	171.9	9.32%
Unknown3/Arabidopsis-Promoters/Homer	AYTAAACCGG	1e0	-0.000e+00	1.0000	8.0	1.54%	144.8	7.85%
WRKY3(WRKY)/col-WRKY3-DAP-Seq(GSE60143)/Homer	NCKTTGACYDDN	1e0	-0.000e+00	1.0000	27.0	5.18%	260.3	14.12%
ERF104(AP2EREBP)/col-ERF104-DAP-Seq(GSE60143)/Homer	GGCGGCGG	1e0	-0.000e+00	1.0000	3.0	0.58%	104.1	5.65%
WRKY47(WRKY)/colamp-WRKY47-DAP-Seq(GSE60143)/Homer	WAAGTCAACGBT	1e0	-0.000e+00	1.0000	4.0	0.77%	114.8	6.22%
bHLH10(bHLH)/colamp-bHLH10-DAP-Seq(GSE60143)/Homer	YACCGACA	1e0	-0.000e+00	1.0000	2.0	0.38%	95.4	5.17%
RAP21(AP2EREBP)/colamp-RAP21-DAP-Seq(GSE60143)/Homer	BCACCGACAHNN	1e0	-0.000e+00	1.0000	1.0	0.19%	83.2	4.51%
RAP212(AP2EREBP)/col-RAP212-DAP-Seq(GSE60143)/Homer	CGCCGCCATTTT	1e0	-0.000e+00	1.0000	10.0	1.92%	161.1	8.74%
AT5G23930(mTERF)/col-AT5G23930-DAP-Seq(GSE60143)/Homer	GGCGGCTG	1e0	-0.000e+00	1.0000	8.0	1.54%	148.2	8.04%
AT3G60490(AP2EREBP)/colamp-AT3G60490-DAP-Seq(GSE60143)/Homer	NNRCCGACANNNNNN	1e0	-0.000e+00	1.0000	2.0	0.38%	97.1	5.26%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e0	-0.000e+00	1.0000	4.0	0.77%	118.2	6.41%
SeqBias: CG-repeat	CGCGCGCGCG	1e0	-0.000e+00	1.0000	3.0	0.58%	109.5	5.94%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e0	-0.000e+00	1.0000	7.0	1.34%	144.3	7.82%
TRPS1(Zf)/MCF7-TRPS1-ChIP-Seq(GSE107013)/Homer	AGATAAGANN	1e0	-0.000e+00	1.0000	112.0	21.50%	918.9	49.83%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e0	-0.000e+00	1.0000	81.0	15.55%	1094.4	59.35%
SRS7(SRS)/colamp-SRS7-DAP-Seq(GSE60143)/Homer	HATAGGTTTH	1e0	-0.000e+00	1.0000	152.0	29.17%	1068.1	57.92%
Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer	TGTCANYT	1e0	-0.000e+00	1.0000	143.0	27.45%	812.7	44.07%
ATAF1(NAC)/col-ATAF1-DAP-Seq(GSE60143)/Homer	YACGTMAY	1e0	-0.000e+00	1.0000	194.0	37.24%	1022.0	55.42%
MYB33(MYB)/col-MYB33-DAP-Seq(GSE60143)/Homer	DDTYNGTTAN	1e0	-0.000e+00	1.0000	79.0	15.16%	968.8	52.53%
ATY13(MYB)/col-ATY13-DAP-Seq(GSE60143)/Homer	YYYAACYRHH	1e0	-0.000e+00	1.0000	219.0	42.03%	1125.5	61.03%
MYB101(MYB)/colamp-MYB101-DAP-Seq(GSE60143)/Homer	TAACNRMY	1e0	-0.000e+00	1.0000	73.0	14.01%	936.3	50.77%
MYB73(MYB)/col-MYB73-DAP-Seq(GSE60143)/Homer	NNNNHAACNGHHDHN	1e0	-0.000e+00	1.0000	94.0	18.04%	907.6	49.21%
Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer	YTGWCADY	1e0	-0.000e+00	1.0000	124.0	23.80%	803.3	43.56%
AT2G15740(C2H2)/col-AT2G15740-DAP-Seq(GSE60143)/Homer	DHNDWATCGATD	1e0	-0.000e+00	1.0000	29.0	5.57%	905.0	49.08%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e0	-0.000e+00	1.0000	110.0	21.11%	669.9	36.32%
At1g49010(MYBrelated)/col-At1g49010-DAP-Seq(GSE60143)/Homer	RGATAASNTT	1e0	-0.000e+00	1.0000	73.0	14.01%	897.9	48.69%
GATA20(C2C2gata)/colamp-GATA20-DAP-Seq(GSE60143)/Homer	TNGATCNDNM	1e0	-0.000e+00	1.0000	46.0	8.83%	872.0	47.28%
At5g58900(MYBrelated)/colamp-At5g58900-DAP-Seq(GSE60143)/Homer	WWWTYTTATCTWWWW	1e0	-0.000e+00	1.0000	75.0	14.40%	805.6	43.68%
AtHB32(ZFHD)/col200-AtHB32-DAP-Seq(GSE60143)/Homer	CGAATTAT	1e0	-0.000e+00	1.0000	16.0	3.07%	912.6	49.49%
MYB81(MYB)/col-MYB81-DAP-Seq(GSE60143)/Homer	NWAACSGWTWNN	1e0	-0.000e+00	1.0000	78.0	14.97%	850.9	46.14%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e0	-0.000e+00	1.0000	100.0	19.19%	713.1	38.67%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e0	-0.000e+00	1.0000	68.0	13.05%	773.7	41.95%
AT5G61620(MYBrelated)/colamp-AT5G61620-DAP-Seq(GSE60143)/Homer	CTTATCCA	1e0	-0.000e+00	1.0000	67.0	12.86%	734.7	39.84%
ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer	VCAGGTRDRY	1e0	-0.000e+00	1.0000	34.0	6.53%	312.7	16.96%
At3g12730(G2like)/colamp-At3g12730-DAP-Seq(GSE60143)/Homer	AAGATTCT	1e0	-0.000e+00	1.0000	90.0	17.27%	715.6	38.80%
STZ(C2H2)/colamp-STZ-DAP-Seq(GSE60143)/Homer	HNBTCACT	1e0	-0.000e+00	1.0000	277.0	53.17%	1300.4	70.51%
AT5G56840(MYBrelated)/colamp-AT5G56840-DAP-Seq(GSE60143)/Homer	TGGATAAGGT	1e0	-0.000e+00	1.0000	64.0	12.28%	687.7	37.29%
RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer	TTGAMCTTTG	1e0	-0.000e+00	1.0000	100.0	19.19%	674.5	36.58%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e0	-0.000e+00	1.0000	110.0	21.11%	690.6	37.45%
AT3G42860(zfGRF)/col-AT3G42860-DAP-Seq(GSE60143)/Homer	CGTTGACTTN	1e0	-0.000e+00	1.0000	3.0	0.58%	111.7	6.06%
Initiator/Drosophila-Promoters/Homer	NTCAGTYG	1e0	-0.000e+00	1.0000	49.0	9.40%	688.7	37.35%
ATHB6(Homeobox)/col-ATHB6-DAP-Seq(GSE60143)/Homer	AATGATTG	1e0	-0.000e+00	1.0000	24.0	4.61%	738.3	40.03%
LIN-39(Homeobox)/cElegans.L3-LIN39-ChIP-Seq(modEncode)/Homer	ATGATTRATG	1e0	-0.000e+00	1.0000	70.0	13.44%	656.9	35.62%
CRC(C2C2YABBY)/col-CRC-DAP-Seq(GSE60143)/Homer	TWATSATA	1e0	-0.000e+00	1.0000	35.0	6.72%	690.1	37.42%
At5g47390(MYBrelated)/col-At5g47390-DAP-Seq(GSE60143)/Homer	CTTATCCA	1e0	-0.000e+00	1.0000	57.0	10.94%	674.3	36.56%
ATHB13(Homeobox)/col-ATHB13-DAP-Seq(GSE60143)/Homer	CAATAATT	1e0	-0.000e+00	1.0000	41.0	7.87%	669.0	36.28%
GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer	RGGATTAR	1e0	-0.000e+00	1.0000	21.0	4.03%	713.4	38.68%
MYB65(MYB)/colamp-MYB65-DAP-Seq(GSE60143)/Homer	RACNGTTA	1e0	-0.000e+00	1.0000	69.0	13.24%	665.1	36.07%
MYB56(MYB)/colamp-MYB56-DAP-Seq(GSE60143)/Homer	HTAACGRMHY	1e0	-0.000e+00	1.0000	35.0	6.72%	632.8	34.31%
MYB77(MYB)/col-MYB77-DAP-Seq(GSE60143)/Homer	NYAACBGYMC	1e0	-0.000e+00	1.0000	31.0	5.95%	617.8	33.50%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e0	-0.000e+00	1.0000	63.0	12.09%	557.4	30.22%
ATHB5(HB)/colamp-ATHB5-DAP-Seq(GSE60143)/Homer	AATGATTG	1e0	-0.000e+00	1.0000	22.0	4.22%	589.2	31.95%
bcd(Homeobox)/Embryo-Bcd-ChIP-Seq(GSE86966)/Homer	VNNGGATTADNN	1e0	-0.000e+00	1.0000	17.0	3.26%	616.3	33.42%
AT4G37180(G2like)/col-AT4G37180-DAP-Seq(GSE60143)/Homer	AGAATCTTNN	1e0	-0.000e+00	1.0000	51.0	9.79%	561.3	30.44%
At5g08520(MYBrelated)/colamp-At5g08520-DAP-Seq(GSE60143)/Homer	ADBSTTATCY	1e0	-0.000e+00	1.0000	50.0	9.60%	562.1	30.48%
At1g19000(MYBrelated)/colamp-At1g19000-DAP-Seq(GSE60143)/Homer	WWTGGATAADDT	1e0	-0.000e+00	1.0000	46.0	8.83%	564.7	30.62%
BHLHA15(bHLH)/NIH3T3-BHLHB8.HA-ChIP-Seq(GSE119782)/Homer	NAMCAGCTGK	1e0	-0.000e+00	1.0000	13.0	2.50%	189.7	10.28%
AT1G49560(G2like)/colamp-AT1G49560-DAP-Seq(GSE60143)/Homer	GAWTCTNWDA	1e0	-0.000e+00	1.0000	31.0	5.95%	591.9	32.10%
GATA15(C2C2gata)/col-GATA15-DAP-Seq(GSE60143)/Homer	KATGATCA	1e0	-0.000e+00	1.0000	49.0	9.40%	573.9	31.12%
WRKY18(WRKY)/col-WRKY18-DAP-Seq(GSE60143)/Homer	NNNTTGACYWNNNNN	1e0	-0.000e+00	1.0000	57.0	10.94%	565.1	30.64%
CUX1(Homeobox)/K562-CUX1-ChIP-Seq(GSE92882)/Homer	TATCGATNAN	1e0	-0.000e+00	1.0000	16.0	3.07%	593.4	32.18%
At5g05790(MYBrelated)/col-At5g05790-DAP-Seq(GSE60143)/Homer	AYCTTATC	1e0	-0.000e+00	1.0000	48.0	9.21%	528.5	28.66%
HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer	RTTATGYAAB	1e0	-0.000e+00	1.0000	53.0	10.17%	514.7	27.91%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e0	-0.000e+00	1.0000	62.0	11.90%	501.3	27.18%
ATHB40(HB)/col-ATHB40-DAP-Seq(GSE60143)/Homer	HCAATWATTG	1e0	-0.000e+00	1.0000	36.0	6.91%	528.0	28.63%
HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer	RTACGTGC	1e0	-0.000e+00	1.0000	58.0	11.13%	505.0	27.38%
At3g11280(MYBrelated)/col-At3g11280-DAP-Seq(GSE60143)/Homer	GATAAGRT	1e0	-0.000e+00	1.0000	45.0	8.64%	510.0	27.66%
MYB105(MYB)/colamp-MYB105-DAP-Seq(GSE60143)/Homer	RATWCCGTTA	1e0	-0.000e+00	1.0000	29.0	5.57%	526.6	28.56%
At1g74840(MYBrelated)/col100-At1g74840-DAP-Seq(GSE60143)/Homer	YHTTATCCAWWT	1e0	-0.000e+00	1.0000	39.0	7.49%	503.3	27.29%
TGA9(bZIP)/colamp-TGA9-DAP-Seq(GSE60143)/Homer	VTGACGTC	1e0	-0.000e+00	1.0000	65.0	12.48%	489.0	26.52%
AT1G71450(AP2EREBP)/col-AT1G71450-DAP-Seq(GSE60143)/Homer	DHDWTGTCGGTG	1e0	-0.000e+00	1.0000	14.0	2.69%	506.5	27.46%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e0	-0.000e+00	1.0000	33.0	6.33%	485.0	26.30%
ATHB6(Homeobox)/Arabidopsis-HB6-ChIP-Seq(GSE80564)/Homer	CAATNATTBN	1e0	-0.000e+00	1.0000	16.0	3.07%	501.8	27.21%
WRKY28(WRKY)/col-WRKY28-DAP-Seq(GSE60143)/Homer	BGTTGACTWH	1e0	-0.000e+00	1.0000	35.0	6.72%	473.5	25.68%
AT3G10030(Trihelix)/colamp-AT3G10030-DAP-Seq(GSE60143)/Homer	GCCGTTAA	1e0	-0.000e+00	1.0000	8.0	1.54%	501.1	27.17%
PBX2(Homeobox)/K562-PBX2-ChIP-Seq(Encode)/Homer	RTGATTKATRGN	1e0	-0.000e+00	1.0000	35.0	6.72%	460.9	24.99%
At1g19210(AP2EREBP)/colamp-At1g19210-DAP-Seq(GSE60143)/Homer	HCACCGACCAHN	1e0	-0.000e+00	1.0000	22.0	4.22%	473.2	25.66%
Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer	NYTAATCCYB	1e0	-0.000e+00	1.0000	13.0	2.50%	483.3	26.21%
LMI1(HB)/colamp-LMI1-DAP-Seq(GSE60143)/Homer	AATTATTG	1e0	-0.000e+00	1.0000	21.0	4.03%	468.9	25.43%
HAT2(Homeobox)/colamp-HAT2-DAP-Seq(GSE60143)/Homer	CYAATSATTR	1e0	-0.000e+00	1.0000	21.0	4.03%	460.2	24.96%
WRKY25(WRKY)/colamp-WRKY25-DAP-Seq(GSE60143)/Homer	NNNNHRGTCAAMNNN	1e0	-0.000e+00	1.0000	43.0	8.25%	434.4	23.56%
ATHB7(Homeobox)/col-ATHB7-DAP-Seq(GSE60143)/Homer	AATGATTG	1e0	-0.000e+00	1.0000	12.0	2.30%	464.1	25.17%
Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer	NHRTCACGACDN	1e0	-0.000e+00	1.0000	42.0	8.06%	440.1	23.86%
MYB113(MYB)/col-MYB113-DAP-Seq(GSE60143)/Homer	HNDAWTCMGTTAYWN	1e0	-0.000e+00	1.0000	24.0	4.61%	451.2	24.47%
SPL5(SBP)/colamp-SPL5-DAP-Seq(GSE60143)/Homer	NNHGTACGGHNN	1e0	-0.000e+00	1.0000	20.0	3.84%	428.8	23.25%
NFIL3(bZIP)/HepG2-NFIL3-ChIP-Seq(Encode)/Homer	VTTACGTAAYNNNNN	1e0	-0.000e+00	1.0000	14.0	2.69%	437.1	23.70%
WRKY55(WRKY)/col-WRKY55-DAP-Seq(GSE60143)/Homer	NCGTTGACTT	1e0	-0.000e+00	1.0000	41.0	7.87%	408.0	22.12%
TATA-box/SacCer-Promoters/Homer	BBHWTATATA	1e0	-0.000e+00	1.0000	27.0	5.18%	404.2	21.92%
PUCHI(AP2EREBP)/colamp-PUCHI-DAP-Seq(GSE60143)/Homer	GCGCCGTY	1e0	-0.000e+00	1.0000	1.0	0.19%	89.1	4.83%
RAP211(AP2EREBP)/colamp-RAP211-DAP-Seq(GSE60143)/Homer	RGCCGGCYWW	1e0	-0.000e+00	1.0000	36.0	6.91%	397.8	21.57%
NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer	NVCACGTG	1e0	-0.000e+00	1.0000	26.0	4.99%	390.5	21.17%
Replumless(BLH)/Arabidopsis-RPL.GFP-ChIP-Seq(GSE78727)/Homer	HGTCWHATCA	1e0	-0.000e+00	1.0000	30.0	5.76%	386.2	20.94%
AT4G00250(GeBP)/col-AT4G00250-DAP-Seq(GSE60143)/Homer	WDTGGATAAKRT	1e0	-0.000e+00	1.0000	34.0	6.53%	400.8	21.74%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e0	-0.000e+00	1.0000	40.0	7.68%	389.3	21.11%
WRKY29(WRKY)/colamp-WRKY29-DAP-Seq(GSE60143)/Homer	MGTTGACTTT	1e0	-0.000e+00	1.0000	26.0	4.99%	403.4	21.87%
WRKY50(WRKY)/col-WRKY50-DAP-Seq(GSE60143)/Homer	NNTTGACTWNNGNNN	1e0	-0.000e+00	1.0000	33.0	6.33%	386.0	20.93%
Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e0	-0.000e+00	1.0000	37.0	7.10%	343.8	18.64%
OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	ATGCATWATGCATRW	1e0	-0.000e+00	1.0000	24.0	4.61%	383.7	20.80%
WRKY15(WRKY)/col-WRKY15-DAP-Seq(GSE60143)/Homer	VGTTGACTWW	1e0	-0.000e+00	1.0000	24.0	4.61%	380.9	20.65%
MYB30(MYB)/colamp-MYB30-DAP-Seq(GSE60143)/Homer	AGGTAGTTGG	1e0	-0.000e+00	1.0000	22.0	4.22%	375.4	20.35%
Knotted(Homeobox)/Corn-KN1-ChIP-Seq(GSE39161)/Homer	GAYGNGACRGGN	1e0	-0.000e+00	1.0000	30.0	5.76%	357.5	19.39%
WRKY75(WRKY)/col-WRKY75-DAP-Seq(GSE60143)/Homer	CGTTGACTWW	1e0	-0.000e+00	1.0000	26.0	4.99%	361.4	19.59%
AT3G25990(Trihelix)/colamp-AT3G25990-DAP-Seq(GSE60143)/Homer	TTAACCATAG	1e0	-0.000e+00	1.0000	18.0	3.45%	373.0	20.23%
WRKY27(WRKY)/colamp-WRKY27-DAP-Seq(GSE60143)/Homer	NHGTTGACYTWD	1e0	-0.000e+00	1.0000	23.0	4.41%	368.4	19.98%
CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e0	-0.000e+00	1.0000	29.0	5.57%	352.9	19.14%
BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e0	-0.000e+00	1.0000	26.0	4.99%	352.8	19.13%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e0	-0.000e+00	1.0000	29.0	5.57%	293.0	15.89%
MYB96(MYB)/colamp-MYB96-DAP-Seq(GSE60143)/Homer	WGGTRGTTGG	1e0	-0.000e+00	1.0000	26.0	4.99%	343.1	18.61%
GATA4(C2C2gata)/col-GATA4-DAP-Seq(GSE60143)/Homer	DDWTYAGATCTR	1e0	-0.000e+00	1.0000	7.0	1.34%	367.0	19.90%
DEAR2(AP2EREBP)/colamp-DEAR2-DAP-Seq(GSE60143)/Homer	HCACCGACAWHD	1e0	-0.000e+00	1.0000	7.0	1.34%	352.2	19.10%
ATHB53(HB)/col-ATHB53-DAP-Seq(GSE60143)/Homer	CAATAATT	1e0	-0.000e+00	1.0000	10.0	1.92%	346.4	18.78%
WRKY24(WRKY)/colamp-WRKY24-DAP-Seq(GSE60143)/Homer	CGTTGACTWW	1e0	-0.000e+00	1.0000	29.0	5.57%	329.4	17.86%
MYB88(MYB)/col-MYB88-DAP-Seq(GSE60143)/Homer	HNACGCTCCT	1e0	-0.000e+00	1.0000	16.0	3.07%	341.4	18.51%
At5g18450(AP2EREBP)/col-At5g18450-DAP-Seq(GSE60143)/Homer	CACCGCTT	1e0	-0.000e+00	1.0000	10.0	1.92%	342.3	18.56%
ATHB21(HB)/colamp-ATHB21-DAP-Seq(GSE60143)/Homer	YCAATWAT	1e0	-0.000e+00	1.0000	2.0	0.38%	349.2	18.94%
MYB3R1(MYB)/col-MYB3R1-DAP-Seq(GSE60143)/Homer	WWDTDACCGTTR	1e0	-0.000e+00	1.0000	24.0	4.61%	338.7	18.36%
Tbx6(T-box)/ESC-Tbx6-ChIP-Seq(GSE93524)/Homer	DAGGTGTBAA	1e0	-0.000e+00	1.0000	29.0	5.57%	325.7	17.66%
WRKY6(WRKY)/colamp-WRKY6-DAP-Seq(GSE60143)/Homer	NCGTTGACTWWD	1e0	-0.000e+00	1.0000	26.0	4.99%	328.1	17.79%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e0	-0.000e+00	1.0000	27.0	5.18%	319.8	17.34%
CEJ1(AP2EREBP)/col-CEJ1-DAP-Seq(GSE60143)/Homer	WWTGTCGGTG	1e0	-0.000e+00	1.0000	8.0	1.54%	338.4	18.35%
WRKY33(WRKY)/col-WRKY33-DAP-Seq(GSE60143)/Homer	CGTTGACYAW	1e0	-0.000e+00	1.0000	21.0	4.03%	325.3	17.64%
Unknown5/Drosophila-Promoters/Homer	GCTGATAASV	1e0	-0.000e+00	1.0000	22.0	4.22%	322.2	17.47%
Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer	GGYAATGAAA	1e0	-0.000e+00	1.0000	21.0	4.03%	247.9	13.44%
WRKY71(WRKY)/col-WRKY71-DAP-Seq(GSE60143)/Homer	CKTTGACYWW	1e0	-0.000e+00	1.0000	23.0	4.41%	298.7	16.20%
TCF4(bHLH)/SHSY5Y-TCF4-ChIP-Seq(GSE96915)/Homer	SMCATCTGKH	1e0	-0.000e+00	1.0000	15.0	2.88%	207.9	11.27%
LBD23(LOBAS2)/colamp-LBD23-DAP-Seq(GSE60143)/Homer	GCGNAWWWTNCGCYW	1e0	-0.000e+00	1.0000	11.0	2.11%	313.5	17.00%
AT1G77200(AP2EREBP)/colamp-AT1G77200-DAP-Seq(GSE60143)/Homer	ACCGACAHWD	1e0	-0.000e+00	1.0000	6.0	1.15%	304.5	16.51%
CBF4(AP2EREBP)/colamp-CBF4-DAP-Seq(GSE60143)/Homer	NRCCGACDWNNNNNN	1e0	-0.000e+00	1.0000	2.0	0.38%	304.9	16.53%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e0	-0.000e+00	1.0000	24.0	4.61%	290.1	15.73%
ERF15(AP2EREBP)/colamp-ERF15-DAP-Seq(GSE60143)/Homer	WDHAGCMGCCAT	1e0	-0.000e+00	1.0000	20.0	3.84%	288.9	15.66%
At1g68670(G2like)/colamp-At1g68670-DAP-Seq(GSE60143)/Homer	WNWWHNRAAGATTCT	1e0	-0.000e+00	1.0000	15.0	2.88%	292.1	15.84%
MYB119(MYB)/colamp-MYB119-DAP-Seq(GSE60143)/Homer	YRACCGTTACDD	1e0	-0.000e+00	1.0000	9.0	1.73%	298.9	16.21%
TGA2(bZIP)/colamp-TGA2-DAP-Seq(GSE60143)/Homer	ACGTCAYCHH	1e0	-0.000e+00	1.0000	13.0	2.50%	294.7	15.98%
WRKY20(WRKY)/col-WRKY20-DAP-Seq(GSE60143)/Homer	CKTTGACYWD	1e0	-0.000e+00	1.0000	23.0	4.41%	281.3	15.25%
ATHB20(Homeobox)/colamp-ATHB20-DAP-Seq(GSE60143)/Homer	CAATHATT	1e0	-0.000e+00	1.0000	13.0	2.50%	286.0	15.51%
WRKY65(WRKY)/colamp-WRKY65-DAP-Seq(GSE60143)/Homer	AWWWAGTCAACG	1e0	-0.000e+00	1.0000	15.0	2.88%	209.8	11.37%
At5g29000(G2like)/col-At5g29000-DAP-Seq(GSE60143)/Homer	RGAATATTCYHH	1e0	-0.000e+00	1.0000	6.0	1.15%	141.3	7.66%
At4g16750(AP2EREBP)/col-At4g16750-DAP-Seq(GSE60143)/Homer	HACCGACAHA	1e0	-0.000e+00	1.0000	7.0	1.34%	286.7	15.55%
GATA14(C2C2gata)/col-GATA14-DAP-Seq(GSE60143)/Homer	AYCAGATCTG	1e0	-0.000e+00	1.0000	4.0	0.77%	281.4	15.26%
Twist2(bHLH)/Myoblast-Twist2.Ty1-ChIP-Seq(GSE127998)/Homer	MCAGCTGBYH	1e0	-0.000e+00	1.0000	18.0	3.45%	269.7	14.62%
WRKY31(WRKY)/colamp-WRKY31-DAP-Seq(GSE60143)/Homer	NCGTTGACTWWK	1e0	-0.000e+00	1.0000	20.0	3.84%	266.0	14.43%
TGA6(bZIP)/colamp-TGA6-DAP-Seq(GSE60143)/Homer	TGACGTCABC	1e0	-0.000e+00	1.0000	14.0	2.69%	260.9	14.15%
bHLH28(bHLH)/col-bHLH28-DAP-Seq(GSE60143)/Homer	NHHTGTACGGAH	1e0	-0.000e+00	1.0000	8.0	1.54%	260.5	14.13%
BIM2(bHLH)/col-BIM2-DAP-Seq(GSE60143)/Homer	NNNNCACGTGNN	1e0	-0.000e+00	1.0000	10.0	1.92%	174.9	9.48%
ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e0	-0.000e+00	1.0000	14.0	2.69%	244.7	13.27%
ELT-3(Gata)/cElegans-L1-ELT3-ChIP-Seq(modEncode)/Homer	AWTGATAAGA	1e0	-0.000e+00	1.0000	12.0	2.30%	249.2	13.51%
WRKY40(WRKY)/colamp-WRKY40-DAP-Seq(GSE60143)/Homer	AHWAGTCAAC	1e0	-0.000e+00	1.0000	13.0	2.50%	239.9	13.01%
Tal1	CATCTG	1e0	-0.000e+00	1.0000	17.0	3.26%	243.1	13.18%
WRKY22(WRKY)/colamp-WRKY22-DAP-Seq(GSE60143)/Homer	WWAAAGTCAACK	1e0	-0.000e+00	1.0000	17.0	3.26%	239.9	13.01%
E2FA(E2FDP)/colamp-E2FA-DAP-Seq(GSE60143)/Homer	WWTGGCGCCAWWWNN	1e0	-0.000e+00	1.0000	5.0	0.96%	258.5	14.02%
NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer	ACCATCTGTT	1e0	-0.000e+00	1.0000	16.0	3.07%	234.9	12.74%
MYB118(MYB)/colamp-MYB118-DAP-Seq(GSE60143)/Homer	TAWCCGTTAC	1e0	-0.000e+00	1.0000	6.0	1.15%	235.1	12.75%
AT1G28160(AP2EREBP)/colamp-AT1G28160-DAP-Seq(GSE60143)/Homer	GGCGGCGG	1e0	-0.000e+00	1.0000	8.0	1.54%	237.4	12.87%
WRKY14(WRKY)/colamp-WRKY14-DAP-Seq(GSE60143)/Homer	NCGTTGACTTTN	1e0	-0.000e+00	1.0000	15.0	2.88%	220.4	11.95%
GATA12(C2C2gata)/col-GATA12-DAP-Seq(GSE60143)/Homer	YAGATCTRAW	1e0	-0.000e+00	1.0000	1.0	0.19%	236.3	12.81%
ESE3(AP2EREBP)/col-ESE3-DAP-Seq(GSE60143)/Homer	GACGGTGG	1e0	-0.000e+00	1.0000	14.0	2.69%	219.0	11.87%
PHV(HB)/col-PHV-DAP-Seq(GSE60143)/Homer	RTAATSATTA	1e0	-0.000e+00	1.0000	9.0	1.73%	223.2	12.10%
Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGCATAATTCA	1e0	-0.000e+00	1.0000	13.0	2.50%	201.6	10.93%
CBF1(AP2EREBP)/colamp-CBF1-DAP-Seq(GSE60143)/Homer	YRCCGACATN	1e0	-0.000e+00	1.0000	2.0	0.38%	231.1	12.53%
PIF4(bHLH)/Seedling-PIF4-ChIP-Seq(GSE35315)/Homer	NNBCACGTGN	1e0	-0.000e+00	1.0000	6.0	1.15%	221.5	12.01%
At1g36060(AP2EREBP)/colamp-At1g36060-DAP-Seq(GSE60143)/Homer	NNWWKGTCGGTG	1e0	-0.000e+00	1.0000	4.0	0.77%	215.9	11.71%
CRF10(AP2EREBP)/col100-CRF10-DAP-Seq(GSE60143)/Homer	DCCGCCGYHA	1e0	-0.000e+00	1.0000	5.0	0.96%	221.6	12.01%
PQM-1(?)/cElegans-L3-ChIP-Seq(modEncode)/Homer	ACTGATAAGA	1e0	-0.000e+00	1.0000	4.0	0.77%	218.0	11.82%
Rap210(AP2EREBP)/col-Rap210-DAP-Seq(GSE60143)/Homer	TGTCGGCA	1e0	-0.000e+00	1.0000	3.0	0.58%	218.4	11.84%
CBF2(AP2EREBP)/colamp-CBF2-DAP-Seq(GSE60143)/Homer	YBRCCGACATNNNNN	1e0	-0.000e+00	1.0000	1.0	0.19%	208.7	11.32%
MYB3R4(MYB)/col-MYB3R4-DAP-Seq(GSE60143)/Homer	AWWTAACCGTTR	1e0	-0.000e+00	1.0000	7.0	1.34%	203.2	11.02%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e0	-0.000e+00	1.0000	7.0	1.34%	196.8	10.67%
CAMTA5(CAMTA)/col-CAMTA5-DAP-Seq(GSE60143)/Homer	ACGCGTTTTANACRC	1e0	-0.000e+00	1.0000	10.0	1.92%	182.3	9.89%
SPL14(SBP)/col-SPL14-DAP-Seq(GSE60143)/Homer	NNWHTGTACGGAHNH	1e0	-0.000e+00	1.0000	4.0	0.77%	126.9	6.88%
Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e0	-0.000e+00	1.0000	11.0	2.11%	196.6	10.66%
DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer	TAGCGCGC	1e0	-0.000e+00	1.0000	3.0	0.58%	199.4	10.81%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e0	-0.000e+00	1.0000	5.0	0.96%	185.3	10.05%
ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer	TTAACCCTTTVNKKN	1e0	-0.000e+00	1.0000	6.0	1.15%	145.9	7.91%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e0	-0.000e+00	1.0000	7.0	1.34%	187.3	10.16%
DREB19(AP2EREBP)/colamp-DREB19-DAP-Seq(GSE60143)/Homer	AATGTCGGTK	1e0	-0.000e+00	1.0000	3.0	0.58%	192.3	10.43%
ATHB15(HB)/col-ATHB15-DAP-Seq(GSE60143)/Homer	GYAATSATTA	1e0	-0.000e+00	1.0000	7.0	1.34%	182.1	9.87%
MNT(bHLH)/HepG2-MNT-ChIP-Seq(Encode)/Homer	DGCACACGTG	1e0	-0.000e+00	1.0000	8.0	1.54%	179.6	9.74%
ANAC042(NAC)/col-ANAC042-DAP-Seq(GSE60143)/Homer	CGTNDHNDHNACGKY	1e0	-0.000e+00	1.0000	9.0	1.73%	177.8	9.64%
NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e0	-0.000e+00	1.0000	7.0	1.34%	177.2	9.61%
Fos(bZIP)/TSC-Fos-ChIP-Seq(GSE110950)/Homer	NDATGASTCAYN	1e0	-0.000e+00	1.0000	4.0	0.77%	180.8	9.80%
HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e0	-0.000e+00	1.0000	3.0	0.58%	181.5	9.84%
DDF1(AP2EREBP)/col-DDF1-DAP-Seq(GSE60143)/Homer	GCCGACAT	1e0	-0.000e+00	1.0000	2.0	0.38%	182.4	9.89%
PIF5ox(bHLH)/Arabidopsis-PIF5ox-ChIP-Seq(GSE35062)/Homer	BCACGTGVDN	1e0	-0.000e+00	1.0000	6.0	1.15%	180.0	9.76%
CBF3(AP2EREBP)/colamp-CBF3-DAP-Seq(GSE60143)/Homer	YNRCCGACATNN	1e0	-0.000e+00	1.0000	1.0	0.19%	185.5	10.06%
GATA1(C2C2gata)/colamp-GATA1-DAP-Seq(GSE60143)/Homer	DDWWYYAGATCTRRW	1e0	-0.000e+00	1.0000	1.0	0.19%	174.0	9.44%
DREB2(AP2EREBP)/col-DREB2-DAP-Seq(GSE60143)/Homer	TMACCGACATWA	1e0	-0.000e+00	1.0000	2.0	0.38%	178.9	9.70%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e0	-0.000e+00	1.0000	5.0	0.96%	174.6	9.47%
Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer	NNATGASTCATH	1e0	-0.000e+00	1.0000	4.0	0.77%	166.4	9.02%
GATA11(C2C2gata)/col-GATA11-DAP-Seq(GSE60143)/Homer	DDHYYAGATCTR	1e0	-0.000e+00	1.0000	1.0	0.19%	172.3	9.34%
AT1G04880(ARID)/colamp-AT1G04880-DAP-Seq(GSE60143)/Homer	AAACTATATADTATA	1e0	-0.000e+00	1.0000	2.0	0.38%	108.0	5.85%
At4g31060(AP2EREBP)/colamp-At4g31060-DAP-Seq(GSE60143)/Homer	CACCGACAAW	1e0	-0.000e+00	1.0000	3.0	0.58%	164.4	8.92%
ERF105(AP2EREBP)/colamp-ERF105-DAP-Seq(GSE60143)/Homer	TGGCGGCT	1e0	-0.000e+00	1.0000	5.0	0.96%	158.2	8.58%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e0	-0.000e+00	1.0000	0.0	0.00%	2.8	0.15%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e0	-0.000e+00	1.0000	0.0	0.00%	2.9	0.16%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e0	-0.000e+00	1.0000	0.0	0.00%	2.9	0.16%
ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer	CCTCATGGTGYCYTWYTCCCTTGTG	1e0	-0.000e+00	1.0000	0.0	0.00%	2.1	0.11%
ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer	RHHCAGAGAGGB	1e0	-0.000e+00	1.0000	0.0	0.00%	2.1	0.11%
bHLH18(bHLH)/col-bHLH18-DAP-Seq(GSE60143)/Homer	CACGTGTTYCACGTG	1e0	-0.000e+00	1.0000	0.0	0.00%	2.6	0.14%
LIN-15B(Zf)/cElegans-L3-LIN15B-ChIP-Seq(modEncode)/Homer	CARTGGAGCGCRYTTGCATT	1e0	-0.000e+00	1.0000	0.0	0.00%	2.7	0.15%
WRKY30(WRKY)/colamp-WRKY30-DAP-Seq(GSE60143)/Homer	CGTTGACTTN	1e0	-0.000e+00	1.0000	3.0	0.58%	119.2	6.47%
JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer	RATGASTCAT	1e0	-0.000e+00	1.0000	5.0	0.96%	150.2	8.14%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e0	-0.000e+00	1.0000	4.0	0.77%	154.4	8.37%
AT1G12630(AP2EREBP)/colamp-AT1G12630-DAP-Seq(GSE60143)/Homer	TGTCGGCA	1e0	-0.000e+00	1.0000	4.0	0.77%	151.3	8.21%
EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	0.9	0.05%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer	ACTTTCGTTTCT	1e0	0.000e+00	1.0000	0.0	0.00%	0.3	0.02%
Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer	CCCCTCCCCCAC	1e0	0.000e+00	1.0000	0.0	0.00%	0.3	0.02%
ZFP3(Zf)/HEK293-ZFP3.GFP-ChIP-Seq(GSE58341)/Homer	GGGTTTTGAAGGATGARTAGGAGTT	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer	MACCTTCYATGGCTCCCTAKTGCCY	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
AT4G12670(MYBrelated)/col-AT4G12670-DAP-Seq(GSE60143)/Homer	AGGGTTTAGGGTTTA	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
BPC6(BBRBPC)/col-BPC6-DAP-Seq(GSE60143)/Homer	YTYTCTCTCTCTCTA	1e0	0.000e+00	1.0000	0.0	0.00%	0.7	0.04%
REM16(ABI3VP1)/col-REM16-DAP-Seq(GSE60143)/Homer	DTTTTTSCCGSMAAA	1e0	0.000e+00	1.0000	0.0	0.00%	0.2	0.01%
WRKY7(WRKY)/colamp-WRKY7-DAP-Seq(GSE60143)/Homer	AAAAGTCAACGSHWD	1e0	0.000e+00	1.0000	0.0	0.00%	0.5	0.03%
At2g03500(G2like)/col-At2g03500-DAP-Seq(GSE60143)/Homer	WWAGAATATTCT	1e0	0.000e+00	1.0000	5.0	0.96%	144.7	7.85%
AT3G16280(AP2EREBP)/colamp-AT3G16280-DAP-Seq(GSE60143)/Homer	HCACCGACAHHDHHN	1e0	0.000e+00	1.0000	2.0	0.38%	155.3	8.42%
AIL7(AP2EREBP)/colamp-AIL7-DAP-Seq(GSE60143)/Homer	KCACRAWTYYCGAGG	1e0	0.000e+00	1.0000	5.0	0.96%	151.9	8.24%
GFY-Staf(?,Zf)/Promoter/Homer	RACTACAATTCCCAGAAKGC	1e0	0.000e+00	1.0000	0.0	0.00%	3.4	0.18%
NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer	GGGGGAATCCCC	1e0	0.000e+00	1.0000	0.0	0.00%	3.9	0.21%
ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer	AAGGKGRCGCAGGCA	1e0	0.000e+00	1.0000	0.0	0.00%	3.7	0.20%
TCP17(TCP)/col-TCP17-DAP-Seq(GSE60143)/Homer	GTGGTCCCCA	1e0	0.000e+00	1.0000	0.0	0.00%	3.2	0.17%
ABF1/SacCer-Promoters/Homer	CGTRNAAARTGA	1e0	0.000e+00	1.0000	4.0	0.77%	152.9	8.29%
DUX(Homeobox)/C2C12-Dux-ChIP-Seq(GSE87279)/Homer	BCWGATTCAATCAAN	1e0	0.000e+00	1.0000	0.0	0.00%	1.4	0.08%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e0	0.000e+00	1.0000	0.0	0.00%	1.9	0.10%
Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer	RACTACAACTCCCAGVAKGC	1e0	0.000e+00	1.0000	0.0	0.00%	2.0	0.11%
ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer	AGAAATGACTTCCCT	1e0	0.000e+00	1.0000	0.0	0.00%	2.0	0.11%
At1g13300(G2like)/col-At1g13300-DAP-Seq(GSE60143)/Homer	GAATCTWAGATTCYN	1e0	0.000e+00	1.0000	0.0	0.00%	1.6	0.09%
AT4G27900(C2C2COlike)/col-AT4G27900-DAP-Seq(GSE60143)/Homer	TCTCVACCGTTSATT	1e0	0.000e+00	1.0000	0.0	0.00%	1.6	0.09%
HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer	TGATKGATGR	1e0	0.000e+00	1.0000	2.0	0.38%	108.0	5.86%
ANAC094(NAC)/col-ANAC094-DAP-Seq(GSE60143)/Homer	DVCGTRNNNNNYACG	1e0	0.000e+00	1.0000	3.0	0.58%	141.5	7.67%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e0	0.000e+00	1.0000	0.0	0.00%	4.6	0.25%
ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e0	0.000e+00	1.0000	0.0	0.00%	4.5	0.24%
Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer	GCCACRCCCACY	1e0	0.000e+00	1.0000	0.0	0.00%	4.6	0.25%
HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e0	0.000e+00	1.0000	1.0	0.19%	148.1	8.03%
WRKY42(WRKY)/colamp-WRKY42-DAP-Seq(GSE60143)/Homer	NAAAGTCAACGN	1e0	0.000e+00	1.0000	2.0	0.38%	145.7	7.90%
CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e0	0.000e+00	1.0000	0.0	0.00%	5.0	0.27%
E-box(bHLH)/Promoter/Homer	SSGGTCACGTGA	1e0	0.000e+00	1.0000	0.0	0.00%	5.6	0.30%
Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e0	0.000e+00	1.0000	0.0	0.00%	5.0	0.27%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e0	0.000e+00	1.0000	0.0	0.00%	5.0	0.27%
TGA3(bZIP)/colamp-TGA3-DAP-Seq(GSE60143)/Homer	WTGATGACGTCATCW	1e0	0.000e+00	1.0000	0.0	0.00%	5.9	0.32%
WRKY17(WRKY)/colamp-WRKY17-DAP-Seq(GSE60143)/Homer	GCGTTGACTTTT	1e0	0.000e+00	1.0000	0.0	0.00%	5.0	0.27%
ERF38(AP2EREBP)/col-ERF38-DAP-Seq(GSE60143)/Homer	CACCGACA	1e0	0.000e+00	1.0000	2.0	0.38%	141.9	7.70%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e0	0.000e+00	1.0000	0.0	0.00%	8.7	0.47%
OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATWATTCATGA	1e0	0.000e+00	1.0000	0.0	0.00%	8.9	0.49%
AT1G10720(BSD)/col-AT1G10720-DAP-Seq(GSE60143)/Homer	TTCTAGAAKCTTCTA	1e0	0.000e+00	1.0000	0.0	0.00%	8.1	0.44%
AT5G22990(C2H2)/col-AT5G22990-DAP-Seq(GSE60143)/Homer	WCGAHDTCGWHN	1e0	0.000e+00	1.0000	1.0	0.19%	137.3	7.45%
AS2(LOBAS2)/col-AS2-DAP-Seq(GSE60143)/Homer	CCGDAAWWHMCGSCG	1e0	0.000e+00	1.0000	0.0	0.00%	6.9	0.37%
GT1(Trihelix)/col-GT1-DAP-Seq(GSE60143)/Homer	TTAACCATGGTTAAD	1e0	0.000e+00	1.0000	0.0	0.00%	6.9	0.37%
Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer	GGATGACTCATC	1e0	0.000e+00	1.0000	2.0	0.38%	111.4	6.04%
MYB3R5(MYB)/col-MYB3R5-DAP-Seq(GSE60143)/Homer	THYAACGGTHAWAWT	1e0	0.000e+00	1.0000	2.0	0.38%	111.3	6.04%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	RGGTCADNNAGAGGTCAV	1e0	0.000e+00	1.0000	0.0	0.00%	7.5	0.40%
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	ATGAATATTCATGAG	1e0	0.000e+00	1.0000	0.0	0.00%	7.0	0.38%
ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer	GAGSCCGAGC	1e0	0.000e+00	1.0000	0.0	0.00%	7.7	0.42%
PTF1(TCP)/colamp-PTF1-DAP-Seq(GSE60143)/Homer	RDDGGGACCACA	1e0	0.000e+00	1.0000	0.0	0.00%	7.2	0.39%
Unknown2/Arabidopsis-Promoters/Homer	AAACGACGTCGTTTT	1e0	0.000e+00	1.0000	0.0	0.00%	7.4	0.40%
GEI-11(Myb?)/cElegans-L4-GEI11-ChIP-Seq(modEncode)/Homer	CCGACAYYTYACGGG	1e0	0.000e+00	1.0000	0.0	0.00%	7.6	0.41%
DEAR3(AP2EREBP)/colamp-DEAR3-DAP-Seq(GSE60143)/Homer	BCACCGACAWNNNNN	1e0	0.000e+00	1.0000	2.0	0.38%	138.5	7.51%
At1g22810(AP2EREBP)/colamp-At1g22810-DAP-Seq(GSE60143)/Homer	BCACCGACANNN	1e0	0.000e+00	1.0000	2.0	0.38%	132.2	7.17%
HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer	GTTAATNATTAA	1e0	0.000e+00	1.0000	2.0	0.38%	120.6	6.54%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e0	0.000e+00	1.0000	0.0	0.00%	9.7	0.53%
TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer	GTCACGTGACYV	1e0	0.000e+00	1.0000	0.0	0.00%	9.1	0.49%
ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer	GARTGGTCATCGCCC	1e0	0.000e+00	1.0000	0.0	0.00%	9.1	0.49%
Unknown3/Drosophila-Promoters/Homer	ACVAKCTGGCAGCGC	1e0	0.000e+00	1.0000	0.0	0.00%	9.7	0.53%
At2g45680(TCP)/colamp-At2g45680-DAP-Seq(GSE60143)/Homer	GTGGGNCCCACNDND	1e0	0.000e+00	1.0000	0.0	0.00%	9.2	0.50%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e0	0.000e+00	1.0000	0.0	0.00%	10.1	0.55%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e0	0.000e+00	1.0000	0.0	0.00%	11.0	0.59%
Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e0	0.000e+00	1.0000	0.0	0.00%	11.7	0.64%
ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer	GTGGGCCCCA	1e0	0.000e+00	1.0000	0.0	0.00%	11.3	0.61%
NRF(NRF)/Promoter/Homer	STGCGCATGCGC	1e0	0.000e+00	1.0000	0.0	0.00%	12.9	0.70%
Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	0.000e+00	1.0000	0.0	0.00%	12.6	0.68%
ZIM(C2C2gata)/col-ZIM-DAP-Seq(GSE60143)/Homer	ATCSRACGGTYRAGA	1e0	0.000e+00	1.0000	0.0	0.00%	12.2	0.66%
EFL-1(E2F)/cElegans-L1-EFL1-ChIP-Seq(modEncode)/Homer	TGCAARYGCGCTCYA	1e0	0.000e+00	1.0000	0.0	0.00%	13.8	0.75%
GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e0	0.000e+00	1.0000	0.0	0.00%	15.4	0.84%
TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	15.2	0.82%
Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e0	0.000e+00	1.0000	0.0	0.00%	16.9	0.92%
AT5G59990(C2C2COlike)/colamp-AT5G59990-DAP-Seq(GSE60143)/Homer	TCTCAACCGTTCATT	1e0	0.000e+00	1.0000	0.0	0.00%	16.3	0.89%
LEP(AP2EREBP)/col-LEP-DAP-Seq(GSE60143)/Homer	CDCCGCCGTC	1e0	0.000e+00	1.0000	0.0	0.00%	16.6	0.90%
HSFA6A(HSF)/col-HSFA6A-DAP-Seq(GSE60143)/Homer	RGAAGNTTCTAGAAN	1e0	0.000e+00	1.0000	0.0	0.00%	14.2	0.77%
PLT3(AP2EREBP)/col-PLT3-DAP-Seq(GSE60143)/Homer	GCACGNWTHYCGAGG	1e0	0.000e+00	1.0000	0.0	0.00%	14.9	0.81%
SHN3(AP2EREBP)/col-SHN3-DAP-Seq(GSE60143)/Homer	CCGCCGCC	1e0	0.000e+00	1.0000	0.0	0.00%	14.9	0.81%
ZML1(C2C2gata)/colamp-ZML1-DAP-Seq(GSE60143)/Homer	ATCWYRACCGTTSRW	1e0	0.000e+00	1.0000	0.0	0.00%	14.3	0.78%
HAT5(Homeobox)/colamp-HAT5-DAP-Seq(GSE60143)/Homer	DCAATWATTG	1e0	0.000e+00	1.0000	0.0	0.00%	100.7	5.46%
SPL3(SBP)/colamp-SPL3-DAP-Seq(GSE60143)/Homer	WDTTGTACGGAH	1e0	0.000e+00	1.0000	0.0	0.00%	20.7	1.13%
AT1G01250(AP2EREBP)/col-AT1G01250-DAP-Seq(GSE60143)/Homer	YCACCGACAHTW	1e0	0.000e+00	1.0000	0.0	0.00%	21.0	1.14%
TCP1(TCP)/col-TCP1-DAP-Seq(GSE60143)/Homer	GGGGGCCCMMCN	1e0	0.000e+00	1.0000	0.0	0.00%	22.2	1.20%
OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	YATGCATATRCATRT	1e0	0.000e+00	1.0000	0.0	0.00%	24.9	1.35%
ANAC017(NAC)/colamp-ANAC017-DAP-Seq(GSE60143)/Homer	TMCTTGNNNNNCAAG	1e0	0.000e+00	1.0000	0.0	0.00%	24.1	1.31%
FAR1(FAR1)/col-FAR1-DAP-Seq(GSE60143)/Homer	TKNNNYYCACGCGCY	1e0	0.000e+00	1.0000	0.0	0.00%	24.0	1.30%
GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e0	0.000e+00	1.0000	0.0	0.00%	26.0	1.41%
PLT1(AP2EREBP)/colamp-PLT1-DAP-Seq(GSE60143)/Homer	GCACGAWTYCCGAGG	1e0	0.000e+00	1.0000	0.0	0.00%	26.1	1.42%
Gli2(Zf)/GM2-Gli2-ChIP-Chip(GSE112702)/Homer	YSTGGGTGGTCT	1e0	0.000e+00	1.0000	0.0	0.00%	23.6	1.28%
DDF2(AP2EREBP)/col-DDF2-DAP-Seq(GSE60143)/Homer	GATGTCGRCR	1e0	0.000e+00	1.0000	0.0	0.00%	27.1	1.47%
ERF5(AP2EREBP)/colamp-ERF5-DAP-Seq(GSE60143)/Homer	DCMGCCGCCA	1e0	0.000e+00	1.0000	0.0	0.00%	30.8	1.67%
Pho4(bHLH)/Yeast-Pho4-ChIP-Seq(GSE29506)/Homer	AAGCACGTGBGD	1e0	0.000e+00	1.0000	0.0	0.00%	30.0	1.63%
KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer	GGGGGTGTGTCC	1e0	0.000e+00	1.0000	0.0	0.00%	31.3	1.70%
At1g77640(AP2EREBP)/col-At1g77640-DAP-Seq(GSE60143)/Homer	TGTCGGTGGA	1e0	0.000e+00	1.0000	0.0	0.00%	31.8	1.73%
GATA6(C2C2gata)/col200-GATA6-DAP-Seq(GSE60143)/Homer	TAGATCTARAHH	1e0	0.000e+00	1.0000	0.0	0.00%	68.9	3.74%
TCP7(TCP)/col-TCP7-DAP-Seq(GSE60143)/Homer	GTGGGSCCCACHHNN	1e0	0.000e+00	1.0000	0.0	0.00%	56.1	3.04%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e0	0.000e+00	1.0000	0.0	0.00%	40.1	2.17%
GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e0	0.000e+00	1.0000	0.0	0.00%	40.6	2.20%
DREF/Drosophila-Promoters/Homer	AVYTATCGATAD	1e0	0.000e+00	1.0000	0.0	0.00%	40.1	2.18%
MYB44(MYB)/colamp-MYB44-DAP-Seq(GSE60143)/Homer	CVGTTWWKTCNGTTA	1e0	0.000e+00	1.0000	0.0	0.00%	41.6	2.26%
ERF1(AP2EREBP)/colamp-ERF1-DAP-Seq(GSE60143)/Homer	GGCGGCTR	1e0	0.000e+00	1.0000	0.0	0.00%	37.2	2.02%
DEAR5(AP2EREBP)/col-DEAR5-DAP-Seq(GSE60143)/Homer	NDWTGTCGGTGRWDN	1e0	0.000e+00	1.0000	0.0	0.00%	53.9	2.92%
ESE1(AP2EREBP)/col-ESE1-DAP-Seq(GSE60143)/Homer	GGCGGCGG	1e0	0.000e+00	1.0000	0.0	0.00%	53.7	2.91%
ERF2(AP2EREBP)/colamp-ERF2-DAP-Seq(GSE60143)/Homer	GGCGGCTG	1e0	0.000e+00	1.0000	0.0	0.00%	45.4	2.46%
ERF9(AP2EREBP)/colamp-ERF9-DAP-Seq(GSE60143)/Homer	AWATGGCGGCGG	1e0	0.000e+00	1.0000	0.0	0.00%	33.2	1.80%
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATATTC	1e0	0.000e+00	1.0000	0.0	0.00%	52.1	2.83%
Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e0	0.000e+00	1.0000	0.0	0.00%	50.5	2.74%
ERF73(AP2EREBP)/col-ERF73-DAP-Seq(GSE60143)/Homer	CCGCCGCC	1e0	0.000e+00	1.0000	0.0	0.00%	39.6	2.15%
GATA19(C2C2gata)/colamp-GATA19-DAP-Seq(GSE60143)/Homer	ATCSGATCVG	1e0	0.000e+00	1.0000	0.0	0.00%	40.0	2.17%
WRKY46(WRKY)/colamp-WRKY46-DAP-Seq(GSE60143)/Homer	AAAGTCAACGSN	1e0	0.000e+00	1.0000	0.0	0.00%	39.1	2.12%